prot_H-paniculata_contig163.3609.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig163.3609.1
Unique Nameprot_H-paniculata_contig163.3609.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length109
Homology
BLAST of mRNA_H-paniculata_contig163.3609.1 vs. uniprot
Match: A0A6H5JHH0_9PHAE (HMG box domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHH0_9PHAE)

HSP 1 Score: 100 bits (248), Expect = 5.550e-25
Identity = 49/73 (67.12%), Postives = 56/73 (76.71%), Query Frame = 0
Query:   33 AKKDPDAPKGASSGFMQFSQSERPRVQEENPDMKITEISKVLGQLWRGMDDNQKKPFNKKAAIDKERFASMIS 105
            AKKDP+ PKGASS FMQFSQ ER  V+EENPDMK+TEISK+LG  WR MDDN K PF KKA  DK R+   ++
Sbjct:   26 AKKDPNKPKGASSAFMQFSQKERAVVKEENPDMKVTEISKLLGARWREMDDNDKAPFQKKADKDKARYQKEMA 98          
BLAST of mRNA_H-paniculata_contig163.3609.1 vs. uniprot
Match: D7FLF8_ECTSI (FACT complex subunit SSRP1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLF8_ECTSI)

HSP 1 Score: 87.8 bits (216), Expect = 5.690e-18
Identity = 41/68 (60.29%), Postives = 53/68 (77.94%), Query Frame = 0
Query:   33 AKKDPDAPKGASSGFMQFSQSERPRVQEENPDMKITEISKVLGQLWRGMDDNQKKPFNKKAAIDKERF 100
            AKKD DAPKGA S FMQFSQ+ R +V+ +NP++K+TEISKVLG+ W  +D+ QKKP+  KA  DK R+
Sbjct:  546 AKKDKDAPKGAMSAFMQFSQANRAQVKTDNPELKVTEISKVLGEKWGKLDETQKKPYQDKADEDKARY 613          
BLAST of mRNA_H-paniculata_contig163.3609.1 vs. uniprot
Match: A0A1X2HFP6_SYNRA (High mobility group box domain-containing protein n=1 Tax=Syncephalastrum racemosum TaxID=13706 RepID=A0A1X2HFP6_SYNRA)

HSP 1 Score: 77.8 bits (190), Expect = 2.060e-16
Identity = 35/68 (51.47%), Postives = 47/68 (69.12%), Query Frame = 0
Query:   33 AKKDPDAPKGASSGFMQFSQSERPRVQEENPDMKITEISKVLGQLWRGMDDNQKKPFNKKAAIDKERF 100
            AKKDP+APK   S +M FSQ +R R Q+ENPD    +I K+LG++W  M D +KKP+  KA  DK+R+
Sbjct:   27 AKKDPNAPKRGLSAYMFFSQEQRTRAQQENPDATFGQIGKILGEMWGKMSDEEKKPYTDKAEADKKRY 94          
BLAST of mRNA_H-paniculata_contig163.3609.1 vs. uniprot
Match: A0A8H7UZ93_9FUNG (HMG box domain-containing protein n=1 Tax=Mucor saturninus TaxID=64648 RepID=A0A8H7UZ93_9FUNG)

HSP 1 Score: 77.0 bits (188), Expect = 3.360e-16
Identity = 35/67 (52.24%), Postives = 48/67 (71.64%), Query Frame = 0
Query:   34 KKDPDAPKGASSGFMQFSQSERPRVQEENPDMKITEISKVLGQLWRGMDDNQKKPFNKKAAIDKERF 100
            KKDP APK   S +M FSQ+ R +V+E+NPD    +I K+LG+ W+GM D  KKPF++KA  DK+R+
Sbjct:   24 KKDPSAPKRGLSAYMFFSQASRAQVKEDNPDATFGQIGKLLGEKWKGMTDEDKKPFHEKAEKDKQRY 90          
BLAST of mRNA_H-paniculata_contig163.3609.1 vs. uniprot
Match: A0A367JMM7_RHIST (Non-histone chromosomal protein 6 n=1 Tax=Rhizopus stolonifer TaxID=4846 RepID=A0A367JMM7_RHIST)

HSP 1 Score: 76.6 bits (187), Expect = 4.630e-16
Identity = 34/68 (50.00%), Postives = 49/68 (72.06%), Query Frame = 0
Query:   33 AKKDPDAPKGASSGFMQFSQSERPRVQEENPDMKITEISKVLGQLWRGMDDNQKKPFNKKAAIDKERF 100
            +KKDP+APK   S +M FSQ +R  V++ NP +   +I K+LG+ W+ M D +KKP+N+KAA DKER+
Sbjct:   22 SKKDPNAPKRGLSAYMYFSQEQRQSVKDANPGVTFGQIGKLLGEKWKSMSDEEKKPYNEKAAKDKERY 89          
BLAST of mRNA_H-paniculata_contig163.3609.1 vs. uniprot
Match: D7FLE3_ECTSI (ATHMG (ARABIDOPSIS THALIANA HIGH MOBILITY GROUP) transcription factor n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLE3_ECTSI)

HSP 1 Score: 76.3 bits (186), Expect = 4.660e-16
Identity = 37/58 (63.79%), Postives = 43/58 (74.14%), Query Frame = 0
Query:   48 MQFSQSERPRVQEENPDMKITEISKVLGQLWRGMDDNQKKPFNKKAAIDKERFASMIS 105
            MQFSQ ER  V++ENPDMK+TEISKVLG  WR MDDN K PF KKA  DK R+   ++
Sbjct:    1 MQFSQKERAVVKQENPDMKVTEISKVLGARWREMDDNDKAPFQKKADKDKARYQKEMA 58          
BLAST of mRNA_H-paniculata_contig163.3609.1 vs. uniprot
Match: I1C3L6_RHIO9 (HMG box domain-containing protein n=1 Tax=Rhizopus delemar (strain RA 99-880 / ATCC MYA-4621 / FGSC 9543 / NRRL 43880) TaxID=246409 RepID=I1C3L6_RHIO9)

HSP 1 Score: 75.5 bits (184), Expect = 1.460e-15
Identity = 34/68 (50.00%), Postives = 47/68 (69.12%), Query Frame = 0
Query:   33 AKKDPDAPKGASSGFMQFSQSERPRVQEENPDMKITEISKVLGQLWRGMDDNQKKPFNKKAAIDKERF 100
            +KKDP APK   S +M FSQ +RP V+EENP     EI K+LG+ W+ + + +KKP+ KKA  DK+R+
Sbjct:   26 SKKDPSAPKRGLSAYMFFSQDQRPTVKEENPKASFGEIGKILGERWKALSEEEKKPYLKKAEDDKKRY 93          
BLAST of mRNA_H-paniculata_contig163.3609.1 vs. uniprot
Match: A0A1X2I3S5_9FUNG (Non-histone chromosomal protein 6 n=1 Tax=Absidia repens TaxID=90262 RepID=A0A1X2I3S5_9FUNG)

HSP 1 Score: 75.1 bits (183), Expect = 1.770e-15
Identity = 36/77 (46.75%), Postives = 51/77 (66.23%), Query Frame = 0
Query:   34 KKDPDAPKGASSGFMQFSQSERPRVQEENPDMKITEISKVLGQLWRGMDDNQKKPFNKKAAIDKERF----ASMISH 106
            KKDP+APK   S +M FSQ+ R +V+EENPD    ++ K+LGQ W+ M D +KKP++ +A  DK R+    A  +SH
Sbjct:   17 KKDPNAPKRGLSAYMFFSQANRNKVKEENPDATFGQLGKILGQKWKEMSDEEKKPYHHQAEKDKARYEAEKAKTVSH 93          
BLAST of mRNA_H-paniculata_contig163.3609.1 vs. uniprot
Match: A0A1R1PG91_ZANCU (Non-histone chromosomal protein 6 n=1 Tax=Zancudomyces culisetae TaxID=1213189 RepID=A0A1R1PG91_ZANCU)

HSP 1 Score: 74.3 bits (181), Expect = 3.650e-15
Identity = 32/68 (47.06%), Postives = 47/68 (69.12%), Query Frame = 0
Query:   33 AKKDPDAPKGASSGFMQFSQSERPRVQEENPDMKITEISKVLGQLWRGMDDNQKKPFNKKAAIDKERF 100
            +KKD   PK + S +M FSQ  R +V+ +NP     E+ K+LG++W+G+ D QKKP+N KAA DK+R+
Sbjct:   18 SKKDKTGPKRSLSAYMFFSQENREKVKRDNPSATFGELGKLLGEMWKGLSDTQKKPYNDKAAADKQRY 85          
BLAST of mRNA_H-paniculata_contig163.3609.1 vs. uniprot
Match: A0A8H7VAX4_9FUNG (HMG box domain-containing protein n=1 Tax=Mucor plumbeus TaxID=97098 RepID=A0A8H7VAX4_9FUNG)

HSP 1 Score: 74.3 bits (181), Expect = 3.840e-15
Identity = 34/67 (50.75%), Postives = 47/67 (70.15%), Query Frame = 0
Query:   34 KKDPDAPKGASSGFMQFSQSERPRVQEENPDMKITEISKVLGQLWRGMDDNQKKPFNKKAAIDKERF 100
            KKDP APK   S +M FSQ +R  V+EE+PD    +I K+LG+ W+ M D++KKP+ KKA  DK+R+
Sbjct:   24 KKDPSAPKRGLSAYMFFSQDQRATVKEESPDATFGQIGKLLGEKWKNMSDDEKKPYVKKAEADKKRY 90          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig163.3609.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JHH0_9PHAE5.550e-2567.12HMG box domain-containing protein n=1 Tax=Ectocarp... [more]
D7FLF8_ECTSI5.690e-1860.29FACT complex subunit SSRP1 n=1 Tax=Ectocarpus sili... [more]
A0A1X2HFP6_SYNRA2.060e-1651.47High mobility group box domain-containing protein ... [more]
A0A8H7UZ93_9FUNG3.360e-1652.24HMG box domain-containing protein n=1 Tax=Mucor sa... [more]
A0A367JMM7_RHIST4.630e-1650.00Non-histone chromosomal protein 6 n=1 Tax=Rhizopus... [more]
D7FLE3_ECTSI4.660e-1663.79ATHMG (ARABIDOPSIS THALIANA HIGH MOBILITY GROUP) t... [more]
I1C3L6_RHIO91.460e-1550.00HMG box domain-containing protein n=1 Tax=Rhizopus... [more]
A0A1X2I3S5_9FUNG1.770e-1546.75Non-histone chromosomal protein 6 n=1 Tax=Absidia ... [more]
A0A1R1PG91_ZANCU3.650e-1547.06Non-histone chromosomal protein 6 n=1 Tax=Zancudom... [more]
A0A8H7VAX4_9FUNG3.840e-1550.75HMG box domain-containing protein n=1 Tax=Mucor pl... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePRINTSPR00886HIGHMOBLTY12coord: 7..27
score: 24.16
coord: 73..92
score: 32.04
coord: 55..73
score: 32.16
coord: 92..108
score: 25.22
NoneNo IPR availablePANTHERPTHR13711SWI/SNF-RELATED CHROMATIN BINDING PROTEINcoord: 14..101
IPR009071High mobility group box domainSMARTSM00398hmgende2coord: 39..107
e-value: 3.3E-17
score: 73.2
IPR009071High mobility group box domainPFAMPF00505HMG_boxcoord: 40..105
e-value: 5.1E-17
score: 62.1
IPR009071High mobility group box domainPROSITEPS50118HMG_BOX_2coord: 40..108
score: 16.249
IPR036910High mobility group box domain superfamilyGENE3D1.10.30.10coord: 25..108
e-value: 6.9E-24
score: 86.0
IPR036910High mobility group box domain superfamilySUPERFAMILY47095HMG-boxcoord: 23..102

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig163contigH-paniculata_contig163:22517..25078 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig163.3609.1mRNA_H-paniculata_contig163.3609.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig163 22333..26067 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig163.3609.1 ID=prot_H-paniculata_contig163.3609.1|Name=mRNA_H-paniculata_contig163.3609.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=109bp
MAKPAAKKNTKKVTSKKSAKKAPPPKVVKKKKAKKDPDAPKGASSGFMQF
SQSERPRVQEENPDMKITEISKVLGQLWRGMDDNQKKPFNKKAAIDKERF
ASMISHHT*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR009071HMG_box_dom
IPR036910HMG_box_dom_sf