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Homology
BLAST of mRNA_H-paniculata_contig163.3608.1 vs. uniprot
Match: A0A6H5JC61_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JC61_9PHAE) HSP 1 Score: 555 bits (1429), Expect = 1.030e-176 Identity = 350/458 (76.42%), Postives = 369/458 (80.57%), Query Frame = 2
Query: 209 FYDSDDGDDAVCPLCCEPMDLSDQNFLPCPCGYRVCMWCWHRIKENYTNLCPACRSEYSDDPHAFAAVDKEEVIKNENXXXXXXXXXXXXXXXXXXXXXXXXXXXXALHLRHXXXXXXXXXXLHREQVAQXXXXXXXXXXXXXXXASSLANRRDLASMRVVQRNLVYATGLPAGLDSDEVLRRPENFGQYGKIYKIAVSTSQASERNPASVSAHITFAHKEDALACILATDGFWVEGRQVRSNFGTTKYCATYLRNSPCQNPDCLYLHELGDEEDRFTKEDIQQRSLLAPPIPPGAVTVTGAGGPSGTGKRCTSPFLPPPVYESSDNGPSGPAQRIIGQSTAAAQATQRTGGRGVKPPAQPRREDRGATQMQQTRQYEPQAPSMASKTSGSVGVAWGGAGASNGPSTQPSGRITSAADVLRRKGSASAASPTASPHLQAHDPTRLQEEWPSLADTAAP 1582
F DSDDGDDAVCPLCCEPMDLSD+NF+PCPCGYRVCMWCWHRIKENYT LCPACRSEY+DDPHAFAAVDKEEVIKNEN XXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXX V XXXXXXXXXXXX A+S+ANRR+LA+MRVVQRNLVYATGLPAGLDS+EVLRRPENFGQYGKIYKIA+S SQASE P + SAHITFAHKEDALACILATDGFW+EGRQ+RSNFGTTKYCATYLRNSPC NPDCLYLHELGDEEDRFTKE+IQQRSLLAPPIPPGAVTVTG GGPSGTG RC SP+LPPPVYESS NG SG R G + A +Q AQ RGA Q A A KTSGS GVAWGGAGA+NGP Q G + A V R KG ASPTASPHLQAH+P RLQEEWPSLADTAAP
Sbjct: 7 FNDSDDGDDAVCPLCCEPMDLSDKNFVPCPCGYRVCMWCWHRIKENYTGLCPACRSEYADDPHAFAAVDKEEVIKNENNKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVXXXXXXXXXXXXXX---ATSVANRRELANMRVVQRNLVYATGLPAGLDSEEVLRRPENFGQYGKIYKIAISVSQASEPRPGNFSAHITFAHKEDALACILATDGFWLEGRQLRSNFGTTKYCATYLRNSPCSNPDCLYLHELGDEEDRFTKEEIQQRSLLAPPIPPGAVTVTGGGGPSGTGMRCNSPYLPPPVYESSSNG-SG--HRESG-AAARSQGXXXXXXXXXATVAQRXXXXRGAKATGQAA-----AVPTALKTSGSTGVAWGGAGATNGPIAQSLGERSGVAVVTRGKGPMGVASPTASPHLQAHNPARLQEEWPSLADTAAP 452
BLAST of mRNA_H-paniculata_contig163.3608.1 vs. uniprot
Match: D7FLE0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLE0_ECTSI) HSP 1 Score: 478 bits (1229), Expect = 3.770e-152 Identity = 284/330 (86.06%), Postives = 298/330 (90.30%), Query Frame = 2
Query: 209 FYDSDDGDDAVCPLCCEPMDLSDQNFLPCPCGYRVCMWCWHRIKENYTNLCPACRSEYSDDPHAFAAVDKEEVIKNENXXXXXXXXXXXXXXXXXXXXXXXXXXXXALHLRHXXXXXXXXXXLHREQVAQXXXXXXXXXXXXXXXASSLANRRDLASMRVVQRNLVYATGLPAGLDSDEVLRRPENFGQYGKIYKIAVSTSQASERNPASVSAHITFAHKEDALACILATDGFWVEGRQVRSNFGTTKYCATYLRNSPCQNPDCLYLHELGDEEDRFTKEDIQQRSLLAPPIPPGAVTVTGAGGPSGTGKRCTSPFLPPPVYESSDNGPS 1198
F DSDDGDDAVCPLCCEPMDLSD+NF+PCPCGYRVCMWCWHRIKENYT LCPACRSEY+DDPHAFAAVDKEEVIKNEN XXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXX XXXXXXXXXXXX A+S+ANRR+LA+MRVVQRNLVYATGLPAGLDS+EVLRRPENFGQYGKIYKIA+S SQASE P + SAHITFAHKEDALACILATDGFW+EGRQ+RSNFGTTKYCATYLRNSPC NPDCLYLHELGDEEDRFTKE+IQQRSLLAPPIPPGAVTVTG GGPSGTG RC SP+LPPPVYESS NG S
Sbjct: 7 FNDSDDGDDAVCPLCCEPMDLSDKNFVPCPCGYRVCMWCWHRIKENYTGLCPACRSEYADDPHAFAAVDKEEVIKNENNKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX---XXXXXXXXXXXXXXXXVGGATSVANRRELANMRVVQRNLVYATGLPAGLDSEEVLRRPENFGQYGKIYKIAISVSQASEPRPGNFSAHITFAHKEDALACILATDGFWLEGRQLRSNFGTTKYCATYLRNSPCSNPDCLYLHELGDEEDRFTKEEIQQRSLLAPPIPPGAVTVTGGGGPSGTGMRCNSPYLPPPVYESSSNGSS 333
BLAST of mRNA_H-paniculata_contig163.3608.1 vs. uniprot
Match: A0A7S2GN38_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2GN38_9STRA) HSP 1 Score: 295 bits (754), Expect = 6.340e-80 Identity = 185/331 (55.89%), Postives = 226/331 (68.28%), Query Frame = 2
Query: 224 DGDDAVCPLCCEPMDLSDQNFLPCPCGYRVCMWCWHRIKENYTNLCPACRSEYSDDPHAFAAVDKEEVIKNENXXXXXXXXXXXXXXXXXXXXXXXXXXXXALHLRHXXXXXXXXXXLHREQVAQXXXXXXXXXXXXXXXASSLANRRDLASMRVVQRNLVYATGLPAGLDSDEVLRRPENFGQYGKIYKIAVSTSQAS----ERNPA---SVSAHITFAHKEDALACILATDGFWVEGRQVRSNFGTTKYCATYLRNSPCQNPDCLYLHELGDEEDRFTKEDIQ--QRSLLAPPIPPGA----VTVTGAGGPSGTGKRCTSPFLPPPVYE 1177
D DD VCPLCCE +D+SD+NF+PC CGY+VCMWCWH IK + LCPACR+ YSDDPHAF+AVD++EV+K XXXXXXXXXXXXXXXXXXXXXXXXX XXXXX + V + A + +R++L ++RVVQRNLVY G+ + S+E LRR E FGQ+GKI K+ V+ + + RN + S SA+ITFAHKEDA ACI A DGFW++GR VR++FGTTKYC ++LRN C NPDCLYLHELG+EED FTKE IQ Q S G V VTG GGPSGTG+R T+P +PPPV++
Sbjct: 3 DSDDDVCPLCCEELDISDKNFMPCRCGYQVCMWCWHHIKNDLNGLCPACRTPYSDDPHAFSAVDRQEVLKQTRQKRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSTGQRMVSLSVGEGDSGKLRSHHDNIR-AHRVPDRKNLQNIRVVQRNLVYVIGISPSIASEETLRRGEYFGQFGKIVKVVVNRNHSGGSGDPRNASASLSASAYITFAHKEDAKACIQAVDGFWMDGRNVRASFGTTKYCNSFLRNLSCTNPDCLYLHELGEEEDSFTKEQIQSGQNSQFKNSTEVGTTDVVVRVTGNGGPSGTGRRVTNPIMPPPVFD 332
BLAST of mRNA_H-paniculata_contig163.3608.1 vs. uniprot
Match: A0A7S4D5P1_HETAK (Hypothetical protein (Fragment) n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4D5P1_HETAK) HSP 1 Score: 280 bits (716), Expect = 3.320e-78 Identity = 146/319 (45.77%), Postives = 186/319 (58.31%), Query Frame = 2
Query: 230 DDAVCPLCCEPMDLSDQNFLPCPCGYRVCMWCWHRIKENYTNLCPACRSEYSDDPHAFAAVDKEEVIKNENXXXXXXXXXXXXXXXXXXXXXXXXXXXXALHLRHXXXXXXXXXXLHREQVAQXXXXXXXXXXXXXXXASSLANRRDLASMRVVQRNLVYATGLPAGLDSDEVLRRPENFGQYGKIYKIAVSTSQ-ASERNP--ASVSAHITFAHKEDALACILATDGFWVEGRQVRSNFGTTKYCATYLRNSPCQNPDCLYLHELGDEEDRFTKEDIQQRSLLAPPIPPGAVTVTGAGGPSGTGKRCTSPFLPPPVYE 1177
+D CPLCCE +DLSD+NF+PCPCGYRVCMWCWH IKEN LCPACRS Y+DDPHAFAAV EEV++ + E A ++R L ++RV+QRNLVY GLP + S+E LRR E FGQYG+I+K+ V+ + A ++P S SA+ITF HK+DA + I A DG+ +GR +R++FGTTKYC +LRN PC NP+CLYLHELGD EDR+T+E+IQ + P G TV G GGPSGTGK+ + PPPV++
Sbjct: 19 EDDNCPLCCEELDLSDKNFVPCPCGYRVCMWCWHHIKENLNGLCPACRSPYADDPHAFAAVATEEVVEKKKKDKKLKKV---------------------------------------ENKATRIS----------------VDKRSLHNVRVIQRNLVYVIGLPLSIASEEDLRRGEFFGQYGRIHKVVVNHNHGAPPKDPRHGSASAYITFCHKDDARSAIQAVDGYQWDGRLIRASFGTTKYCNNFLRNLPCTNPECLYLHELGDSEDRYTREEIQTGASKTDAGPFGTQTVVGEGGPSGTGKKVANSVFPPPVFD 282
BLAST of mRNA_H-paniculata_contig163.3608.1 vs. uniprot
Match: A0A1Z5J8U8_FISSO (CCR4-NOT transcription complex subunit 4 n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5J8U8_FISSO) HSP 1 Score: 259 bits (663), Expect = 1.820e-69 Identity = 135/337 (40.06%), Postives = 189/337 (56.08%), Query Frame = 2
Query: 224 DGDDAVCPLCCEPMDLSDQNFLPCPCGYRVCMWCWHRIKENYTNLCPACRSEYSDDPHAFAAVDKEEVIKNENXXXXXXXXXXXXXXXXXXXXXXXXXXXXALHLRHXXXXXXXXXXLHREQVAQXXXXXXXXXXXXXXXASSLANRRDLASMRVVQRNLVYATGLPAGLDSDEVLRRPENFGQYGKIYKIAVSTSQASERNP-ASVSAHITFAHKEDALACILATDGFWVEGRQVRSNFGTTKYCATYLRNSPCQNPDCLYLHELGDEEDRFTKEDIQ-------------QRSLLAPPIPPGAVTVT-----GAGGPSGTGKRCTSPFLPPPVYE 1177
D D VCPLCCE +DLSD+ F PC CGY+VCMWCWHRI+E+ + LCPACR+ Y +DPH F+AVD E+V+K + E V+ +R LA+MRV++RNLVYA GLPA + S++VLR+PE FGQYGKI KI ++ + + + AS SA++TF HKED LACILA DGF+++ R +R+++GT+KYC+ ++++ C NP+C YLHE+G ED FTK++IQ Q+ +++ + A G GGPSGTG+ +SP PP ++
Sbjct: 2 DDADHVCPLCCEELDLSDREFYPCKCGYQVCMWCWHRIRESESGLCPACRTPYGEDPHQFSAVDVEDVLKANKARDAALKRQKQQEGGMLSASQHEGLPNSVAN----------------EDVSNVTMEVPK-------------DRSQLANMRVIRRNLVYAVGLPASIASEDVLRKPEYFGQYGKIAKIVINRAISGDAGRRASASAYVTFVHKEDTLACILALDGFYLDNRNIRASYGTSKYCSAFIKSVRCNNPECTYLHEMGATEDTFTKQEIQAGYVTSGRDVLARQQQIVSEQLRLNATGAVPRKRVGGGGPSGTGRASSSPVFPPXEFD 309
BLAST of mRNA_H-paniculata_contig163.3608.1 vs. uniprot
Match: A0A835YKN6_9STRA (RING/Ubox like zinc-binding domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YKN6_9STRA) HSP 1 Score: 240 bits (613), Expect = 8.520e-69 Identity = 124/277 (44.77%), Postives = 158/277 (57.04%), Query Frame = 2
Query: 212 YDSD-DGDDAVCPLCCEPMDLSDQNFLPCPCGYRVCMWCWHRIKENYTNLCPACRSEYSDDPHAFAAVDKEEVIKNENXXXXXXXXXXXXXXXXXXXXXXXXXXXXALHLRHXXXXXXXXXXLHREQVAQXXXXXXXXXXXXXXXASSLANRRDLASMRVVQRNLVYATGLPAGLDSDEVLRRPENFGQYGKIYKIAVSTSQA---SERNPASVSAHITFAHKEDALACILATDGFWVEGRQVRSNFGTTKYCATYLRNSPCQNPDCLYLHELGDEE 1030
+DSD D +D VCPLCCE +DLSD+NFLPC CGYRVC+WCWH IK++ LCPACR+ YSDDPHAFAAVD+++VIK+E LA + L + +VQRNLVY GLP S+E +RRPE FGQ+GKI K+ + +Q + S SA+I+F H+EDA ACI + DGF +EGR V++NFGTTKYC ++LR+ PC N +C+YLHELGDEE
Sbjct: 3 FDSDNDSEDDVCPLCCEELDLSDKNFLPCQCGYRVCIWCWHTIKDHMNGLCPACRNPYSDDPHAFAAVDRDDVIKSEKRKRR------------------------------------------------------------------LARQHALLHLPLVQRNLVYVVGLPPVAASEEYIRRPEWFGQFGKINKVVANLNQGLPPGDARHGSASAYISFVHREDARACIHSVDGFVLEGRTVKANFGTTKYCNSFLRHLPCNNNECMYLHELGDEE 213
BLAST of mRNA_H-paniculata_contig163.3608.1 vs. uniprot
Match: A0A7S2Y5J5_9STRA (Hypothetical protein n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S2Y5J5_9STRA) HSP 1 Score: 258 bits (660), Expect = 1.460e-68 Identity = 141/362 (38.95%), Postives = 197/362 (54.42%), Query Frame = 2
Query: 224 DGDDAVCPLCCEPMDLSDQNFLPCPCGYRVCMWCWHRIKENYTNLCPACRSEYSDDPHAFAAVDKEEVIKNENXXXXXXXXXXXXXXXXXXXXXXXXXXXXALHLRHXXXXXXXXXXLHREQVAQXXXXXXXXXXXXXXXASSLANRRDLASMRVVQRNLVYATGLPAGLDSDEVLRRPENFGQYGKIYKIAVSTSQASERNP--ASVSAHITFAHKEDALACILATDGFWVEGRQVRSNFGTTKYCATYLRNSPCQNPDCLYLHELGDEEDRFTKEDIQ-------------QRSLLAPPIP-----PGAVTVTGAGGPSGTGKRCTSPFLPPPVYESSDNGPSGPAQRIIGQSTAAAQAT 1249
D + VCPLCCE +DLSD+ F PC CGY+VCMWCWHRI+E + LCPACR+ Y +DPH F+AVD ++ IK +H + + +R LA+MRV++RNLVYA GLP + S++ LRR + FGQYGKI KI ++ +QA+ +P A+ SA++TF HKED LACILA DGF ++GR VR+++GT+KYC+ +++N C NPDC YLHE+G ED FTK++IQ Q+ ++A + P G GGPSGTGK + P P P ++ P+ P+ ++ T A+A+
Sbjct: 2 DESEHVCPLCCEDLDLSDREFYPCKCGYQVCMWCWHRIRETESGLCPACRTPYGEDPHQFSAVDVDKAIKANKEKEAAAKRDRQRSGQNNPQQPGVP--------------------VHEHHIGEILSEASMEVPK---------DRTLLANMRVIRRNLVYAVGLPPTVGSEDNLRRADYFGQYGKIAKIVLNRTQATSGDPRRATCSAYVTFVHKEDTLACILAMDGFHMDGRNVRASYGTSKYCSAFIKNVRCNNPDCTYLHEMGAAEDTFTKQEIQAGYVTSGRDVLARQQQIVAEQLKQAGSGPAPRKRIGGGGPSGTGKASSHPIFPAPEFDE----PTKPSPTLVPPPTGIARAS 330
BLAST of mRNA_H-paniculata_contig163.3608.1 vs. uniprot
Match: A0A7S1C198_9STRA (Hypothetical protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1C198_9STRA) HSP 1 Score: 256 bits (655), Expect = 2.510e-67 Identity = 148/337 (43.92%), Postives = 199/337 (59.05%), Query Frame = 2
Query: 230 DDAVCPLCCEPMDLSDQNFLPCPCGYRVCMWCWHRIKENYTNLCPACRSEYSDDPHAFAAVDKEEVIKNENXXXXXXXXXXXXXXXXXXXXXXXXXXXXALHLRHXXXXXXXXXXLHREQVAQXXXXXXXXXXXXXXXASSLA---------NRRDLASMRVVQRNLVYATGLPAGLDSDEVLRRPENFGQYGKIYKIAVSTSQ---ASERNPASVSAHITFAHKEDALACILATDGFWVEGRQVRSNFGTTKYCATYLRNSPCQNPDCLYLHELGDEEDRFTKEDIQQ------RSLLAPPIPPGAVTV---TGAGGPSGTGKRCTSPFLPPPVYE 1177
D+ VCPLCCE +D+SD+ F PC CGY+VCMWCWHRI+EN LCPACR+ Y DDPH F+A+D EEV++ XXXXXXXXXX A XXXX SSL+ +R LA+MRV++RNLVYA GLP SD++LRR E+FGQYG+I K+ ++ S + AS SA++TF +KEDALACILA DGF+++GR +R+++GT+KYC+ +++N C NP+C YLH +G+ ED FTK++IQ R +LA G + + PS +GK C +P PPP ++
Sbjct: 3 DNEVCPLCCEELDISDKQFFPCKCGYQVCMWCWHRIRENENGLCPACRTPYGDDPHEFSAIDMEEVVRANKEKAAAEKREXXXXXXXXXXRTNGDGAGSR-----------------PPXXAYSNGXXXXGDTDGNNHHSSLSLVSGPTPPRDRSQLANMRVIRRNLVYAVGLPPSSASDDMLRRSEHFGQYGRIGKVVLNRSHIGGGGDPRRASASAYVTFVNKEDALACILALDGFYLDGRNIRASYGTSKYCSAFIKNVRCNNPECTYLHHMGEAEDTFTKQEIQAGYVTSGRDVLAKLQAGGGSCIRKRSXXXXPSSSGKACVNPVFPPPTWD 322
BLAST of mRNA_H-paniculata_contig163.3608.1 vs. uniprot
Match: B8BXU6_THAPS (Uncharacterized protein (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BXU6_THAPS) HSP 1 Score: 231 bits (590), Expect = 1.020e-65 Identity = 112/271 (41.33%), Postives = 153/271 (56.46%), Query Frame = 2
Query: 242 CPLCCEPMDLSDQNFLPCPCGYRVCMWCWHRIKENYTNLCPACRSEYSDDPHAFAAVDKEEVIKNENXXXXXXXXXXXXXXXXXXXXXXXXXXXXALHLRHXXXXXXXXXXLHREQVAQXXXXXXXXXXXXXXXASSLANRRDLASMRVVQRNLVYATGLPAGLDSDEVLRRPENFGQYGKIYKIAVSTSQ-ASERNPASVSAHITFAHKEDALACILATDGFWVEGRQVRSNFGTTKYCATYLRNSPCQNPDCLYLHELGDEEDRFTKED 1051
CPLCCE +DLSD+ F PC CGY+VCMWCWHRIKE+ + LCPACR+ Y DDPH F+A+ +H Q +R LA+MRV++RNLVYA G+P + ++E+LR+PE FGQYGKI KI ++ + + AS SA++TF HKED LACILA DGF+ +GR +R+++GT+KYC+ ++++ C NPDC YLH +GD+ED FTK++
Sbjct: 1 CPLCCEELDLSDKQFYPCKCGYQVCMWCWHRIKESESGLCPACRTPYGDDPHEFSAI-----------------------------------------------------GIHH----QASDFASLLASNSRGPPEPPKDRSTLATMRVIRRNLVYAVGMPPSIATEELLRKPEYFGQYGKIAKIVINRNHNPGDPRRASASAYVTFVHKEDTLACILALDGFYHDGRNIRASYGTSKYCSAFIKSVKCNNPDCTYLHHMGDQEDTFTKQE 214
BLAST of mRNA_H-paniculata_contig163.3608.1 vs. uniprot
Match: A0A7S3L167_9STRA (Hypothetical protein n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3L167_9STRA) HSP 1 Score: 248 bits (633), Expect = 1.200e-65 Identity = 131/281 (46.62%), Postives = 177/281 (62.99%), Query Frame = 2
Query: 224 DGDDAVCPLCCEPMDLSDQNFLPCPCGYRVCMWCWHRIKENYTNLCPACRSEYSDDPHAFAAVDKEEVIKNENXXXXXXXXXXXXXXXXXXXXXXXXXXXXALHLRHXXXXXXXXXXLHREQVAQXXXXXXXXXXXXXXXASSLA-NRRDLASMRVVQRNLVYATGLPAGLDSDEVLRRPENFGQYGKIYKIAVSTSQAS--ERNPASVSAHITFAHKEDALACILATDGFWVEGRQVRSNFGTTKYCATYLRNSPCQNPDCLYLHELGDEEDRFTKEDIQ 1057
D D VCPLCCE +DLSD+ F PC CGY+VCMWCWHRI+E + LCPACR+ Y +DPH F+AVD EEV+K ++E+ A XXXXXXXX A ++ +R LA+MRV++RNLVYA GLP + ++E LR+P+ FGQYGKI KI ++ SQA+ + AS SA++TF +KED L+CILA DGF+++ R +R+++GT+KYC+ +++N C NPDC YLHE+G ED FTK++IQ
Sbjct: 2 DDADYVCPLCCEELDLSDREFYPCKCGYQVCMWCWHRIRETESGLCPACRTPYGEDPHQFSAVDVEEVLK-----------------------------------------------ANKEKEAAXXXXXXXXQTEDGVDAMAVPQDRTQLANMRVIRRNLVYAVGLPPHIATEENLRKPDFFGQYGKISKIVINRSQANVADARRASASAYVTFVYKEDTLSCILALDGFYLDNRNIRASYGTSKYCSAFIKNVRCNNPDCTYLHEMGAAEDTFTKQEIQ 235
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Taxonomic scope | Eukaryota |
| Seed ortholog score | 485.3 |
| Seed ortholog evalue | 7.9e-134 |
| Seed eggNOG ortholog | 2880.D7FLE0 |
| KEGG ko | ko:K10643 |
| KEGG Pathway | ko03018,map03018 |
| Hectar predicted targeting category | other localisation |
| GOs | GO:0000075,GO:0000077,GO:0000278,GO:0000288,GO:0000289,GO:0000956,GO:0002682,GO:0003674,GO:0003824,GO:0004842,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006401,GO:0006402,GO:0006464,GO:0006508,GO:0006511,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0006977,GO:0007049,GO:0007093,GO:0007154,GO:0007165,GO:0007346,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009892,GO:0009987,GO:0010468,GO:0010564,GO:0010605,GO:0010629,GO:0010948,GO:0016070,GO:0016071,GO:0016567,GO:0016740,GO:0019222,GO:0019439,GO:0019538,GO:0019787,GO:0019941,GO:0022402,GO:0023052,GO:0030163,GO:0030330,GO:0031570,GO:0031571,GO:0032446,GO:0033554,GO:0034641,GO:0034655,GO:0035556,GO:0036211,GO:0042770,GO:0043170,GO:0043412,GO:0043632,GO:0044237,GO:0044238,GO:0044248,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0044270,GO:0044424,GO:0044444,GO:0044464,GO:0044773,GO:0044774,GO:0044783,GO:0044819,GO:0045595,GO:0045637,GO:0045652,GO:0045786,GO:0045787,GO:0045930,GO:0046483,GO:0046700,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0050789,GO:0050793,GO:0050794,GO:0050896,GO:0051239,GO:0051603,GO:0051716,GO:0051726,GO:0051865,GO:0060255,GO:0065007,GO:0070647,GO:0071156,GO:0071158,GO:0071704,GO:0072331,GO:0072395,GO:0072401,GO:0072413,GO:0072422,GO:0072431,GO:0090068,GO:0090304,GO:0140096,GO:1901360,GO:1901361,GO:1901564,GO:1901565,GO:1901575,GO:1901987,GO:1901988,GO:1901990,GO:1901991,GO:1902400,GO:1902402,GO:1902403,GO:1902806,GO:1902807,GO:1903047,GO:1903706,GO:2000026,GO:2000045,GO:2000134 |
| EggNOG free text desc. | nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay |
| EggNOG OGs | COG5175@1,KOG2068@2759 |
| EC | 2.3.2.27 |
| COG Functional cat. | K |
| Best tax level | Eukaryota |
| Best eggNOG OG | NA|NA|NA |
| BRITE | ko00000,ko00001,ko01000,ko03019,ko04121 |
| Exons | 5 |
| Model size | 4445 |
| Cds size | 3564 |
| Stop | 1 |
| Start | 1 |
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig163.3608.1 >prot_H-paniculata_contig163.3608.1 ID=prot_H-paniculata_contig163.3608.1|Name=mRNA_H-paniculata_contig163.3608.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=1188bp
MSNNFYDSDDGDDAVCPLCCEPMDLSDQNFLPCPCGYRVCMWCWHRIKEN
YTNLCPACRSEYSDDPHAFAAVDKEEVIKNENKKKQRAKQKDTDSAGAAA
AAAAAREHQHALHLRHHHQHQQHLQHLHREQVAQQQGGGGGGGGGGGSGA
SSLANRRDLASMRVVQRNLVYATGLPAGLDSDEVLRRPENFGQYGKIYKI
AVSTSQASERNPASVSAHITFAHKEDALACILATDGFWVEGRQVRSNFGT
TKYCATYLRNSPCQNPDCLYLHELGDEEDRFTKEDIQQRSLLAPPIPPGA
VTVTGAGGPSGTGKRCTSPFLPPPVYESSDNGPSGPAQRIIGQSTAAAQA
TQRTGGRGVKPPAQPRREDRGATQMQQTRQYEPQAPSMASKTSGSVGVAW
GGAGASNGPSTQPSGRITSAADVLRRKGSASAASPTASPHLQAHDPTRLQ
EEWPSLADTAAPAPAPTPAPATQTAGRRNRRKKERQTAQLFPPQSQEEAD
TTTSPPAHPVTPPQDPSPSRVPAPAPSASPSQAPAPTPTATPVPTPTQTQ
QSPVTSPPAAAAQQRERLTPQGAPVLQVDDNTPLCAVAAMYDFADRSRPQ
AKQEGQVTQDPLSLKTFAPETVAASAKTSSPTGSSSSMFSNPFFSSNGAA
STSTTAPVPPGFGDLSSASVASTLVPPAVASPPAAAVATLSSPQKVAGAQ
PVQSFIGEHFVGLDVFNEGMFSSSAIGGGLFAGDPGAGASSSTGKTDPAS
SRDASSRVIVHVAQGLLAGRSSSSQGDPTGSPSLQPTDAEVSVAGLLKPT
SQGAGNGVTEGNSMSFSPASVDAATAAGSSPFGAAFGGGHFGGAFGSALF
PVSSHQAGGGMHGNGVGETDGPGADLSVDPFANSSGALAAMLGVTLPPVD
SQSSLASKMRSGTGDSRMTSGHEMSPQRTLTPSQRRYDDFAPDGVRGREG
VGHGRGGHRQGFVREEGGVGGANEALQGSGFPFAQGLNPGLPFSPARGSP
AMGPDPRGSPPGVGSPPHLGARHHVHHHHQSHAHRPFGGARPLSPPELGE
FAGPSDGQFPPHHHHRHRFQHQQQQQQLPPQQQQSQQQQPQQGYSIQNGM
AFLQKVLPGVSLSYGDRHPPAGAGGGHGQQGQGASGAPSGRVGWGDNAAG
QRVDPAQAFGSTLWTMAPAPNAPRQPQGSRGSGYGAW* back to topmRNA from alignment at H-paniculata_contig163:8077..18221+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_H-paniculata_contig163.3608.1 ID=mRNA_H-paniculata_contig163.3608.1|Name=mRNA_H-paniculata_contig163.3608.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=10145bp|location=Sequence derived from alignment at H-paniculata_contig163:8077..18221+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
TCTCACTCACGCAGATCGTGTAAAGGGGGGCAGGACTAGAGAGATCGATT
GAACCCCCAGGATACCCGTAGGTGTGCCAAAAAGCACGCCCTGGGACCAT
CGCGACGTCGCGAAGCAACAGGTAGGTTCCGTCTTCAACTTGGGTCTATG
TGACTCTCGTTATTCGGTTTGGGTTTCGGTTGTGTTTGGGCAGCAGCGGT
TGCCGGCCAAGGGCCAGCTTTGAGCAAGGGTCTATGAAAATCTAATAATA
CCGGTATGGCGCAGGAAGGGACTAGCTGCCCTTCGGATGCTCGTGGCGAG
CTGCAAGCCCTGCTCATTTCCTAAGATAGTCCCCACTCTCTGACGGTGTA
AAGTAGAAAGCTCTCCTTCCGAGTTTTGGAATGGAATAGTTTCGTCCAAT
GTGGATCAAAAACACACACACATCTCGCCTCCTGACTTCCACAGGGCAGG
CAACTTGGCCTCTGGGAAGGAAGGCTCATAGACCCGCTTAATTCCTTTTG
CCTGACTGAGGTTCGGGGGGTTGCGTTGAGTTTGCGTTGAGTCTACCCTA
AAGGCTCCCGTATACATCATCCTTCAGGTGTTCTTTGCGTTCGCCCTCCT
TGAGCGTTGTCCTTCATCTATACCAGAACACCGCGTTTCGTAGCTTCACT
GTCACAATTCAATGGCGTCGTTGTGGGACCATCGTTTTTGCTGACATACT
GAACTGACTGTGCAGCTCAGGTAGTAAGTACATTGCTACAATACGTTACA
ACATTGGGCCATATTATCATTTGTCTGCACTATATTATTGTTGCACCTTT
AGGTGTGCATTCGACTGAAAACACATATACCGTAGACAGTACATGCTTGT
TTCTTCACTCCACATGTACATTGTACCTTACAGCACATACTTGATGACGC
CACTGTAATATGCAGTTATCGCGGCTGGAGGGCGTCGCCCACACCCGCAG
CAGCAGGAACGGCCGCAGTAGTAGCAGCAGCAGCATCGTCATGTCCAACA
ATTTTTACGATTCCGATGATGGCGACGACGCGGTTTGCCCGCTGTGCTGC
GAGCCGATGGACCTGTCGGACCAGAATTTTCTACCCTGCCCGTGCGGCTA
CCGTGTGTGCATGTGGTGTTGGCACCGCATTAAGGAAAATTATACAAATT
TGTGTCCAGCCTGTCGCTCTGAATACTCGGACGACCCCCACGCGTTCGCT
GCAGTGGACAAAGAAGAGGTCATCAAAAACGAGAACAAGAAGAAGCAGAG
GGCGAAGCAAAAAGACACGGATTCTGCCGGAGCTGCGGCGGCTGCTGCGG
CCGCCCGAGAACACCAGCATGCGCTGCATTTGCGACATCATCACCAACAT
CAGCAGCACTTACAGCACTTACACCGCGAACAGGTGGCGCAGCAGCAAGG
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGAAGCGGGGCGAGCTCTCTGG
CGAATCGACGCGACCTCGCCAGCATGCGGGTCGTCCAGCGCAATCTGGTT
TATGCGACTGGCTTGCCGGCCGGTCTTGACTCCGATGAGGTTTTGCGAAG
GCCGGAAAATTTTGGGCAGTACGGCAAGATCTATAAGGTATGCATACGGG
GAGTAATGAGTCTCTAGGGGTTTGTAACATACACGGATAGTTTATTCTGG
TAATATTCTCGTCTCGCTCGCTCTCTGGGATTTAGCCTGAAAGGCACTAC
TGGGGACACCCCATGTACAGTACCCGGAAAAGTCCACAGAAGCAACCGTT
TCTCTCGTCGTTTATATGCACGTTGAACTAACGGGGTTTGCTGACAGTGG
TGTGAGGCGTTTTTCCTTGGAATTTGTCGTCAGTACTGAACTTTTTGTAC
CGAGCCCTTACTCTCGCATCAAGCCTCGACTGCTTTCGCATTACCAAGAG
GGCGACTTCTACTGTGAATGTAAGACTAGATAGCATTTCTCCCCCCAAAA
AATTGTCCTTGAGGAAGAGGAGGAAACCTGCACCCAACACTTACACCGAA
CCCGGCCTCGTGTGCCAGTTACCCGTAGGCCTGGCTGATTCGCCTTGCGA
TGGCCATGTCAGCTAGGTACCCTGAGTTTCGCTGGACTTTACTCAGGGTC
TCACCCATTTGATGATTCCCTCAACGTTGTGCAACACACGCACCGCCCTA
CTTGACTGAGGTGCACGAACGATGGACGCCGCCCGTTGACTTCAGCTTGT
GTGTCGCCGGAACCCGCTCACCCCGCCTTATCTCTGTTTTCTTTCGCTGT
TATTGTGCAGATCGCCGTCTCCACTTCGCAGGCTTCCGAACGAAATCCGG
CATCTGTTAGCGCCCACATTACATTCGCCCACAAGGAGGATGCTTTAGCG
TGCATCCTCGCCACGGATGGGTAAGATTTTTTACTGCAGTCTCTACTGAA
CAAGAAATATATAGTACGACTACGAGGGAACAACATGGCAAAAATTTGCG
GAACAGTGGACCCGCCCCGTTGTCTTTGCATTTGCAGTCTTCGCGCGGAT
AAATTGCGACTCCAAGTGTTAACGCGGTGCCCATCTTCACCGTCATTTGA
CGTACGTGAAAGGCCGGTAATTTCAGACGCAAAGTTTTGTGTACGAGACG
TGGATGTATTTCAGCACAGGCATCTCGACACGGATTCCGGAGTAAATAGA
GTTGTAGAGTACACGACGATCCACCTTCAGTTTTGTAGTGTAGGACCATC
TCTGGGCACATGATTGATAAAAAAGGAAGAAAGGTTGCCAGGTAGCGGCT
TATCCCCCGTGATCTGTAGCTGGTAGCCGTAGTACACGCGTAATTGGCGT
GCCACTGTGCTTTCCACCCCAGAGAGTGCAACCACTGTTAACACCACTCG
GAAGCGCTGTGAGGGGAGGAGCCTAAGCCCGCGACTAGGTACCAAGTACT
AAGCTCCGATTTCCGATCCCCCCAAAACGCGGGTTATACAATCATATCGG
TCTTCCTTCGGTTCATCACTTATGAACCGATGGAATTATATGGGATAGCC
GTTGTACGTGACTTGTCCGTTAATGTGCTTGTTGGTGCTTGGGCACAACA
GCAGGCACTCTCGAAGCGGTGAGGGGTGGATTATCGACACGGGTGTTATC
TTCAGGAGGTTTTGATTGTAATATCCAAACTGTCGTGCAACTTCGAGTCA
ATGTCGTGCTTGTCCGAGACAGGTTTCGGAACTGTTGATTTTCGTGTGTC
AAAAACACCACAATGCAGTCCCCCCGGAAATTGAAGTGTTCAGACACGGT
AGTCATGATCTTCGAGGTCGCGTTTGGTTCCTATGGTCACTTTTTTTCCG
GGTTGCTGTACATGTCGCATTTCTCATCATGTTGATACGCTGCACCAGTA
GAAGAGTGTTTTTAATCAGTGGTGTGAAAAGGTGGGGCTTCCAAATGAAA
TACCCGCATAAATGTCAAACAGGATCATGACCTCACCCCGATGTGGTCCT
CGTGAAGATGGTTGACCTGTTCGTTCTCGTCGGCGAACTGATGGGGCTGG
ACCATTTCAGATCCGCGTAGCTACGAATCGTTGTAGAGTTTGCGTCAAAT
GGTGTGCTCCAGGGTTCGTGGACGACCGCTTGTAGGTTGATCAAGGTCAG
CAGCATCACGGATCTATGCAATCGGACGCGGCGAGGTTTCTAAATTAACT
ACCAAGTGCATACGCGACACTACGGTGATATCGTGATTCATCATCACATT
TAACGTCCGTATACGGAGTCTTTTCTCAAATACTAGCAGGCCAAATATTC
GATTGTGGATCGGTCTTTTTTAATTATATGCTTAATTTCAGTACGTCCGT
CTTTCTCACAGTTGATATTTGCCGATAATCAGCCAGGTCGTTTTGGTATC
ATCTTTGTCACGCCGCAAACGGTTCTAAAGGACTGCATGCATAAAGTTGC
GCGTCACCGATCCGCATGTGGGGACGTGACCTTGCGGAGAGCCATCGAAA
ATAGACAATCATCGGGATCGACGCCTTTGCGTTGTTCAACCCTCTCAGTT
GACGTTTGCAGTCAATTAGTTATCCATCTAGCAGTCGTTGTGTAGCAAAT
AGTCTCACTTCCAATCTGCTGTGCGTGGGAAATCAACGGGGTTCCTTGGA
CAAATCCAACATGCCAGTATAATGTATAATCAGGCACTAAAATTTGAGAT
GTTGCGCGAATCTGTTTATGTCTCTCTGATGTGCTAGTTATTCCGTTGGC
AACTAACCAACCAACTAGCTGAGTCATTCAGTCAGTCCCCACTTCGCGGA
AAGCCAATATTAGCGTGAGGTTACTAATGAAACGTTTCTTACATCAATGC
CCACAGGTTTTGGGTTGAAGGACGACAAGTTCGGTCGAATTTCGGCACAA
CCAAGTACTGTGCCACGTACCTCCGGAATTCGCCGTGCCAAAACCCGGAC
TGCCTTTACCTCCATGAGCTTGGCGACGAGGAGGATCGTTTCACGAAAGA
GGATATTCAGCAACGATCATTGCTCGCCCCCCCCATCCCCCCTGGGGCCG
TGACGGTAACAGGGGCGGGGGGTCCTAGCGGCACGGGAAAGCGATGTACC
TCTCCGTTTCTGCCGCCGCCGGTCTACGAATCGTCGGACAATGGGCCAAG
CGGGCCGGCGCAGAGAATCATCGGTCAATCGACAGCCGCGGCGCAGGCCA
CGCAGCGAACGGGCGGGAGGGGAGTAAAGCCACCTGCGCAGCCCCGGAGG
GAGGATCGTGGGGCAACACAGATGCAGCAGACGCGTCAGTACGAACCACA
GGTTTGTTTTGTGCTGAAATATATTGATTGCAATATCTGGTGTCGGCGTT
GATATTTTATGGCTGCGGCCGTCCTAGTAATGTCTGCAGAAAAAATTGGA
AGTGATTGTTTTTGTATGTTTCGTGGACAAATATGTGCGATACATATCTT
GTCGCGTGACGGATCCTAAGGGACATCACGATATCTTGAGTTTGTTCAAC
GAGGATGTTGTGATCCGCGGGTCGCGTTAAAATCCTCTGGTGTTTCTCTG
GGATTCGAGTACGGAGTTTGATTTTTGTCAGGGCAAGTATGTCATAGACT
CCGCTAGGGCAGACATGGATGACGAGAGGGCGTGGGGAGCAAACAGCACA
TTTGGTAAAAAACTACCTTCAATCAGCGAAAGCAACATGCATTCCTAGTC
AAGAATTATTGCATGGGTAATCCTTATGTAATAGTCCCCCAAGTATACTC
AACCCCAGTCCACGAATCGTAACAGTGTCGTATCATCTGACAGCAAGGGT
TATTATTTATTATTCACCTCTATATGCTGTACGCTACAATAAACGCTCCA
CCCCTCGCGGAAATCAGAAATGAAACACAGCCACCCTTGTGGAAAATTGC
AAAATTCGTTGGTTCAAGCGCGTCCGCTCTTATCTAGCTACAATCCTTCC
AGCTTGCTCATCCCTGCAAGATCCTTGGCTACTGCTGCTACAGCGTAACC
TAATGCTCGGGGAGAGTAACTGGGTATAGTTATATAACTGCAGTCAGCAT
GTACAGCTCGTGGGATTCTATCCAGAAAGAGGAGCAACGTAGCCAAGGCG
TCTCTCAAAACATGTTGATACACTGCCGTGTACGACGCAATTCGAAGTGA
AGCTTAGGCCCAGTGCCCACTAAACTGTCGACGCCACGTTCTAGGCTTCA
GTTACTGTGGTACGGTGCACACAAATAAAACACAGCCAGTCGGGTCGTAA
ATTCACGATTTGCGAGTGGGACACTATCTTCCAGTCGTTACGTCATTTGA
CGGTATTGAGAAACCAGATATGTCTGCATATCGTGATCAGACCCGCAATT
CCAAAGCGAAAAATACTACATACATCCCCCATGGCTCAAAAACACCAGCG
CGTTGCTAGCTTAGCTGTTTACGTGTAGCTGTGGTTGGGAACGAGATTTT
CTACACGGAACGTCGCATGCAGGCACAACGTTGGAAGTCAAGTTTAGGAC
GGGGACTACGGACCTCGAAGGGATTACATACCTGAGATGATGATGCGACA
TTCAATTGTGGTTGCCGTTGGGCGTGCAAGGACCAATTCACGTGGTCGGA
GGAAACTCTCTGTGCAAGGACGATAGAGAAATGTACATCGTTGAGTTGGA
GGGAAAATAAAAAGTGTGATCTAGAAGAATTTGATAAAATGGTGGAAACA
AGGCAATATCGGTCCTGGAAGACGTAAATTCGCCTGAGAAGGCGAGGTCT
GAAGTAATTTTGATAGGTGGAAGCTTTTTCAGCCAAGTTTTGCAACGTGG
GAAAAAGCGATTAGCTATCGGAGATCGCTGTGATCCAAACAGCGCTCCGT
CGTATCAGGGCCGCGTGGTTAATGGTTTAACAACTACGGCAGCAAAGATG
CCCCCCATCTCTGAACGGCGCTAGAAGTGGAGGTTGTCGTGGCGAACTGT
GCGCACGTTTAGCCAAGGTGTGGTGTGAACGTGATAACGTAAGTTGGACC
ATGTCAGTTGAGGCCACTAGCTTATTTTTTTACAAAATAGTTTGTAGTTT
ATGTGACGTTGATTTTGTTGCGTTTGAATAGGGTGGATATATGTGCGCAC
GTACAATGGGAACGATGGAGTGTCACCCCTCCTTTTCCAGTTTTACGCAA
GTGAGCCTTAATGGTCGAAAACAGCGGTAGAGGATGAATAATCAAGATTT
GACTGGAAAGACGAAAAGTCGTAGCCATATCGACGGAGTGTGTCCATACT
GAGCGTTCATTGGTAAGAGAATGGCGGTCAACGGCCCCGTATGATTCACA
GCTGGACGCTGGCCATTGTAAATGGCGTAGTCGTTTGTGGTAATCTTTTC
GTTCACCCATGTATGAACGGCAGTATCCACTTTGCTCAAGTTGACCACCG
AAAATGCTGTGTGGAATTGCCTTGCCCCCGCCAGTGAGCGTTGAGCCTTC
GCACGAGCATATAGCGGGAAACGTTGAAGAGGGGATTGATTCGCTTGGGC
TCAATTCGTAATCAATACTGTTGGCCCTCCTTAAATAACTGTGTTGATTT
GTTTTTCTCATCCCTACTTGAATCCGCTGGTATGTTCATGTTACTCAGGC
TCCTTCGATGGCATCCAAGACCTCTGGGTCTGTTGGCGTAGCGTGGGGTG
GGGCTGGGGCGTCGAACGGGCCCAGTACCCAACCTTCGGGACGCATTACC
AGCGCGGCGGACGTACTGAGGCGCAAAGGCTCCGCTAGCGCGGCCAGCCC
CACCGCGTCTCCGCACCTGCAGGCTCACGACCCGACGCGGCTACAGGAGG
AGTGGCCGTCACTTGCGGATACAGCCGCACCGGCTCCAGCTCCAACGCCC
GCGCCCGCTACGCAGACAGCCGGCCGGAGGAACCGCCGGAAAAAGGAAAG
GCAAACGGCACAGCTTTTCCCTCCACAGTCTCAAGAAGAGGCAGATACGA
CCACTTCACCTCCTGCCCATCCGGTAACACCTCCGCAGGACCCGTCGCCG
TCGCGTGTGCCGGCTCCGGCCCCCTCTGCATCTCCGTCTCAAGCTCCGGC
TCCGACTCCGACCGCGACCCCGGTTCCCACCCCGACCCAAACGCAGCAGT
CTCCTGTGACATCGCCGCCTGCCGCAGCAGCACAGCAGCGTGAACGGCTT
ACGCCCCAGGGTGCCCCAGTACTGCAGGTTGATGACAACACCCCGTTATG
TGCGGTGGCAGCGATGTATGACTTCGCGGATAGATCTCGACCGCAGGCGA
AGCAGGAGGGGCAGGTGACGCAGGATCCGTTGTCACTGAAGACATTTGCA
CCGGAGACAGTGGCGGCGTCTGCGAAAACATCGAGTCCGACTGGGTCGTC
GTCGTCCATGTTCTCGAACCCTTTCTTCAGTAGCAACGGTGCTGCGTCGA
CGTCGACTACGGCCCCTGTTCCGCCAGGGTTCGGCGACCTTTCGTCTGCC
TCTGTCGCATCCACTCTGGTGCCGCCAGCCGTGGCGTCCCCACCTGCAGC
TGCGGTCGCGACGCTGTCTTCCCCGCAGAAGGTGGCCGGGGCGCAGCCTG
TACAGTCGTTTATCGGAGAGCACTTCGTTGGCCTTGACGTATTCAATGAG
GGTATGTTTTCTTCCTCGGCAATTGGGGGTGGGTTGTTTGCTGGCGACCC
GGGGGCAGGGGCTTCCTCATCTACTGGCAAGACGGATCCGGCGTCCTCCC
GTGATGCTTCCTCCCGGGTCATCGTTCATGTGGCACAGGGTTTGCTTGCT
GGTCGATCGTCCTCATCGCAGGGGGATCCAACAGGATCGCCGTCCTTGCA
ACCAACTGATGCAGAGGTGTCGGTGGCTGGCCTGTTAAAGCCGACCTCCC
AAGGAGCAGGTAATGGAGTTACAGAGGGTAATTCCATGTCTTTTTCGCCC
GCCTCAGTAGATGCTGCCACGGCGGCGGGTTCGTCTCCGTTTGGGGCTGC
TTTTGGCGGCGGTCACTTCGGTGGTGCGTTTGGAAGTGCTTTATTTCCTG
TGTCATCTCATCAAGCGGGTGGTGGGATGCACGGCAATGGAGTAGGAGAA
ACTGACGGCCCAGGGGCAGATCTCTCTGTTGATCCGTTCGCTAATTCGTC
GGGTGCTTTGGCCGCAATGTTGGGAGTTACGTTGCCTCCCGTGGACTCTC
AAAGCTCCTTAGCGAGCAAAATGAGGTCCGGGACGGGAGACTCCCGCATG
ACCTCTGGACATGAAATGTCTCCGCAGCGCACACTCACGCCCTCACAAAG
GCGCTACGATGATTTTGCACCCGATGGTGTGCGTGGCCGGGAAGGGGTTG
GACATGGGCGAGGCGGGCACAGGCAAGGTTTTGTGAGGGAAGAGGGAGGC
GTAGGAGGGGCAAACGAAGCCCTGCAGGGATCGGGGTTTCCGTTCGCCCA
AGGCCTAAACCCGGGGCTACCCTTTTCGCCAGCGAGAGGGTCACCCGCTA
TGGGACCAGACCCACGGGGCTCTCCTCCTGGTGTGGGTAGCCCCCCTCAC
CTTGGCGCGCGTCACCATGTTCACCACCACCATCAATCACACGCGCACAG
GCCATTCGGCGGTGCGCGCCCCCTTTCTCCCCCAGAACTCGGCGAGTTCG
CGGGGCCCAGCGATGGGCAATTTCCTCCGCATCATCACCACCGTCATCGT
TTCCAGCACCAACAGCAACAGCAACAGCTTCCCCCGCAGCAGCAGCAGTC
ACAGCAGCAGCAACCGCAGCAAGGTTACTCGATACAAAATGGTATGGCAT
TTCTGCAAAAAGTGCTACCTGGGGTATCTCTTTCTTATGGCGATCGTCAT
CCGCCGGCTGGGGCCGGGGGAGGCCATGGGCAACAGGGGCAAGGTGCCTC
GGGTGCCCCCAGTGGGCGCGTTGGTTGGGGAGACAATGCAGCGGGGCAAC
GAGTAGATCCGGCACAGGCATTCGGATCGACGCTTTGGACAATGGCACCT
GCGCCTAACGCCCCGCGCCAGCCGCAAGGAAGCAGGGGTAGCGGATACGG
TGCGTGGTGAGCTGGGGCTGGGGCTCAAGCTCATAATGACACTAATTTCT
GCCGGTAACTCGGCAGGGTACATGATCGTCTTTTTTCTGCGGTAGACGGT
GGTTGTGAGGACGACATGCGTCGGGTTTGGGCTACGGTTGGCAGACGGTA
GCGCAGGGCGTTAGGCGCATGGTCGGCGATAATTTAGCGAGGTGTAGCGC
TGTTTGGCATGCGAGCTGGAGATGTGGTAGCTTTCCCTTGTTGAGTAACC
TTATGGAGAAGCATTCGAAGGCTTACAGGAAACACCATGAAAGCTCCTGC
TAGTATTCTACATCACGAGGGAGACGGTTCTTTGCTCTTTTCAGTTTCGT
TTTGTTTGGGTATGGATGAATGCCCCGCTACGTGGATGTGCGCATTGAAC
CACTACAATTTTTCGTTGGTTGATGAAAGAAGTCTCAACCTAAACGCATC
GAGTCTCGCTCTTGTGCAAATATTGCTTGTTATCCAGCTCACGTATAGGA
TAGCATGCCAGGCGTTTCCAAGACGCCTATTCTACATCGAAAACAATGCT
TATTTACTTTTTAGCGCTGCTTGTTTCATGCAAGCAGGGGGCATAGTCGT
CATCGCGAAGCACTGCCCCGGTGATTAATTCCCCTCTTCGAGGCGCTTTT
TTGTGGCAGTGCATCCCCTCGTCGAGGCAATACAGCAAGTGCCCA back to topCoding sequence (CDS) from alignment at H-paniculata_contig163:8077..18221+ >mRNA_H-paniculata_contig163.3608.1 ID=mRNA_H-paniculata_contig163.3608.1|Name=mRNA_H-paniculata_contig163.3608.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=7128bp|location=Sequence derived from alignment at H-paniculata_contig163:8077..18221+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGTCCAACAATTTTTACGATTCCGATGATGGCGACGACGCGGTTTGCCC
GCTGTGCTGCGAGCCGATGGACCTGTCGGACCAGAATTTTCTACCCTGCC
CGTGCGGCTACCGTGTGTGCATGTGGTGTTGGCACCGCATTAAGGAAAAT
TATACAAATTTGTGTCCAGCCTGTCGCTCTGAATACTCGGACGACCCCCA
CGCGTTCGCTGCAGTGGACAAAGAAGAGGTCATCAAAAACGAGAACAAGA
AGAAGCAGAGGGCGAAGCAAAAAGACACGGATTCTGCCGGAGCTGCGGCG
GCTGCTGCGGCCGCCCGAGAACACCAGCATGCGCTGCATTTGCGACATCA
TCACCAACATCAGCAGCACTTACAGCACTTACACCGCGAACAGGTGGCGC
AGCAGCAAGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGAAGCGGGGCG
AGCTCTCTGGCGAATCGACGCGACCTCGCCAGCATGCGGGTCGTCCAGCG
CAATCTGGTTTATGCGACTGGCTTGCCGGCCGGTCTTGACTCCGATGAGG
TTTTGCGAAGGCCGGAAAATTTTGGGCAGTACGGCAAGATCTATAAGATG
TCCAACAATTTTTACGATTCCGATGATGGCGACGACGCGGTTTGCCCGCT
GTGCTGCGAGCCGATGGACCTGTCGGACCAGAATTTTCTACCCTGCCCGT
GCGGCTACCGTGTGTGCATGTGGTGTTGGCACCGCATTAAGGAAAATTAT
ACAAATTTGTGTCCAGCCTGTCGCTCTGAATACTCGGACGACCCCCACGC
GTTCGCTGCAGTGGACAAAGAAGAGGTCATCAAAAACGAGAACAAGAAGA
AGCAGAGGGCGAAGCAAAAAGACACGGATTCTGCCGGAGCTGCGGCGGCT
GCTGCGGCCGCCCGAGAACACCAGCATGCGCTGCATTTGCGACATCATCA
CCAACATCAGCAGCACTTACAGCACTTACACCGCGAACAGGTGGCGCAGC
AGCAAGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGAAGCGGGGCGAGC
TCTCTGGCGAATCGACGCGACCTCGCCAGCATGCGGGTCGTCCAGCGCAA
TCTGGTTTATGCGACTGGCTTGCCGGCCGGTCTTGACTCCGATGAGGTTT
TGCGAAGGCCGGAAAATTTTGGGCAGTACGGCAAGATCTATAAGATCGCC
GTCTCCACTTCGCAGGCTTCCGAACGAAATCCGGCATCTGTTAGCGCCCA
CATTACATTCGCCCACAAGGAGGATGCTTTAGCGTGCATCCTCGCCACGG
ATGGATCGCCGTCTCCACTTCGCAGGCTTCCGAACGAAATCCGGCATCTG
TTAGCGCCCACATTACATTCGCCCACAAGGAGGATGCTTTAGCGTGCATC
CTCGCCACGGATGGGTTTTGGGTTGAAGGACGACAAGTTCGGTCGAATTT
CGGCACAACCAAGTACTGTGCCACGTACCTCCGGAATTCGCCGTGCCAAA
ACCCGGACTGCCTTTACCTCCATGAGCTTGGCGACGAGGAGGATCGTTTC
ACGAAAGAGGATATTCAGCAACGATCATTGCTCGCCCCCCCCATCCCCCC
TGGGGCCGTGACGGTAACAGGGGCGGGGGGTCCTAGCGGCACGGGAAAGC
GATGTACCTCTCCGTTTCTGCCGCCGCCGGTCTACGAATCGTCGGACAAT
GGGCCAAGCGGGCCGGCGCAGAGAATCATCGGTCAATCGACAGCCGCGGC
GCAGGCCACGCAGCGAACGGGCGGGAGGGGAGTAAAGCCACCTGCGCAGC
CCCGGAGGGAGGATCGTGGGGCAACACAGATGCAGCAGACGCGTCAGTAC
GAACCACAGGTTTTGGGTTGAAGGACGACAAGTTCGGTCGAATTTCGGCA
CAACCAAGTACTGTGCCACGTACCTCCGGAATTCGCCGTGCCAAAACCCG
GACTGCCTTTACCTCCATGAGCTTGGCGACGAGGAGGATCGTTTCACGAA
AGAGGATATTCAGCAACGATCATTGCTCGCCCCCCCCATCCCCCCTGGGG
CCGTGACGGTAACAGGGGCGGGGGGTCCTAGCGGCACGGGAAAGCGATGT
ACCTCTCCGTTTCTGCCGCCGCCGGTCTACGAATCGTCGGACAATGGGCC
AAGCGGGCCGGCGCAGAGAATCATCGGTCAATCGACAGCCGCGGCGCAGG
CCACGCAGCGAACGGGCGGGAGGGGAGTAAAGCCACCTGCGCAGCCCCGG
AGGGAGGATCGTGGGGCAACACAGATGCAGCAGACGCGTCAGTACGAACC
ACAGGCTCCTTCGATGGCATCCAAGACCTCTGGGTCTGTTGGCGTAGCGT
GGGGTGGGGCTGGGGCGTCGAACGGGCCCAGTACCCAACCTTCGGGACGC
ATTACCAGCGCGGCGGACGTACTGAGGCGCAAAGGCTCCGCTAGCGCGGC
CAGCCCCACCGCGTCTCCGCACCTGCAGGCTCACGACCCGACGCGGCTAC
AGGAGGAGTGGCCGTCACTTGCGGATACAGCCGCACCGGCTCCAGCTCCA
ACGCCCGCGCCCGCTACGCAGACAGCCGGCCGGAGGAACCGCCGGAAAAA
GGAAAGGCAAACGGCACAGCTTTTCCCTCCACAGTCTCAAGAAGAGGCAG
ATACGACCACTTCACCTCCTGCCCATCCGGTAACACCTCCGCAGGACCCG
TCGCCGTCGCGTGTGCCGGCTCCGGCCCCCTCTGCATCTCCGTCTCAAGC
TCCGGCTCCGACTCCGACCGCGACCCCGGTTCCCACCCCGACCCAAACGC
AGCAGTCTCCTGTGACATCGCCGCCTGCCGCAGCAGCACAGCAGCGTGAA
CGGCTTACGCCCCAGGGTGCCCCAGTACTGCAGGTTGATGACAACACCCC
GTTATGTGCGGTGGCAGCGATGTATGACTTCGCGGATAGATCTCGACCGC
AGGCGAAGCAGGAGGGGCAGGTGACGCAGGATCCGTTGTCACTGAAGACA
TTTGCACCGGAGACAGTGGCGGCGTCTGCGAAAACATCGAGTCCGACTGG
GTCGTCGTCGTCCATGTTCTCGAACCCTTTCTTCAGTAGCAACGGTGCTG
CGTCGACGTCGACTACGGCCCCTGTTCCGCCAGGGTTCGGCGACCTTTCG
TCTGCCTCTGTCGCATCCACTCTGGTGCCGCCAGCCGTGGCGTCCCCACC
TGCAGCTGCGGTCGCGACGCTGTCTTCCCCGCAGAAGGTGGCCGGGGCGC
AGCCTGTACAGTCGTTTATCGGAGAGCACTTCGTTGGCCTTGACGTATTC
AATGAGGGTATGTTTTCTTCCTCGGCAATTGGGGGTGGGTTGTTTGCTGG
CGACCCGGGGGCAGGGGCTTCCTCATCTACTGGCAAGACGGATCCGGCGT
CCTCCCGTGATGCTTCCTCCCGGGTCATCGTTCATGTGGCACAGGGTTTG
CTTGCTGGTCGATCGTCCTCATCGCAGGGGGATCCAACAGGATCGCCGTC
CTTGCAACCAACTGATGCAGAGGTGTCGGTGGCTGGCCTGTTAAAGCCGA
CCTCCCAAGGAGCAGGTAATGGAGTTACAGAGGGTAATTCCATGTCTTTT
TCGCCCGCCTCAGTAGATGCTGCCACGGCGGCGGGTTCGTCTCCGTTTGG
GGCTGCTTTTGGCGGCGGTCACTTCGGTGGTGCGTTTGGAAGTGCTTTAT
TTCCTGTGTCATCTCATCAAGCGGGTGGTGGGATGCACGGCAATGGAGTA
GGAGAAACTGACGGCCCAGGGGCAGATCTCTCTGTTGATCCGTTCGCTAA
TTCGTCGGGTGCTTTGGCCGCAATGTTGGGAGTTACGTTGCCTCCCGTGG
ACTCTCAAAGCTCCTTAGCGAGCAAAATGAGGTCCGGGACGGGAGACTCC
CGCATGACCTCTGGACATGAAATGTCTCCGCAGCGCACACTCACGCCCTC
ACAAAGGCGCTACGATGATTTTGCACCCGATGGTGTGCGTGGCCGGGAAG
GGGTTGGACATGGGCGAGGCGGGCACAGGCAAGGTTTTGTGAGGGAAGAG
GGAGGCGTAGGAGGGGCAAACGAAGCCCTGCAGGGATCGGGGTTTCCGTT
CGCCCAAGGCCTAAACCCGGGGCTACCCTTTTCGCCAGCGAGAGGGTCAC
CCGCTATGGGACCAGACCCACGGGGCTCTCCTCCTGGTGTGGGTAGCCCC
CCTCACCTTGGCGCGCGTCACCATGTTCACCACCACCATCAATCACACGC
GCACAGGCCATTCGGCGGTGCGCGCCCCCTTTCTCCCCCAGAACTCGGCG
AGTTCGCGGGGCCCAGCGATGGGCAATTTCCTCCGCATCATCACCACCGT
CATCGTTTCCAGCACCAACAGCAACAGCAACAGCTTCCCCCGCAGCAGCA
GCAGTCACAGCAGCAGCAACCGCAGCAAGGTTACTCGATACAAAATGGTA
TGGCATTTCTGCAAAAAGTGCTACCTGGGGTATCTCTTTCTTATGGCGAT
CGTCATCCGCCGGCTGGGGCCGGGGGAGGCCATGGGCAACAGGGGCAAGG
TGCCTCGGGTGCCCCCAGTGGGCGCGTTGGTTGGGGAGACAATGCAGCGG
GGCAACGAGTAGATCCGGCACAGGCATTCGGATCGACGCTTTGGACAATG
GCACCTGCGCCTAACGCCCCGCGCCAGCCGCAAGGAAGCAGGGGTAGCGG
ATACGGTGCGTGGTGAGCTCCTTCGATGGCATCCAAGACCTCTGGGTCTG
TTGGCGTAGCGTGGGGTGGGGCTGGGGCGTCGAACGGGCCCAGTACCCAA
CCTTCGGGACGCATTACCAGCGCGGCGGACGTACTGAGGCGCAAAGGCTC
CGCTAGCGCGGCCAGCCCCACCGCGTCTCCGCACCTGCAGGCTCACGACC
CGACGCGGCTACAGGAGGAGTGGCCGTCACTTGCGGATACAGCCGCACCG
GCTCCAGCTCCAACGCCCGCGCCCGCTACGCAGACAGCCGGCCGGAGGAA
CCGCCGGAAAAAGGAAAGGCAAACGGCACAGCTTTTCCCTCCACAGTCTC
AAGAAGAGGCAGATACGACCACTTCACCTCCTGCCCATCCGGTAACACCT
CCGCAGGACCCGTCGCCGTCGCGTGTGCCGGCTCCGGCCCCCTCTGCATC
TCCGTCTCAAGCTCCGGCTCCGACTCCGACCGCGACCCCGGTTCCCACCC
CGACCCAAACGCAGCAGTCTCCTGTGACATCGCCGCCTGCCGCAGCAGCA
CAGCAGCGTGAACGGCTTACGCCCCAGGGTGCCCCAGTACTGCAGGTTGA
TGACAACACCCCGTTATGTGCGGTGGCAGCGATGTATGACTTCGCGGATA
GATCTCGACCGCAGGCGAAGCAGGAGGGGCAGGTGACGCAGGATCCGTTG
TCACTGAAGACATTTGCACCGGAGACAGTGGCGGCGTCTGCGAAAACATC
GAGTCCGACTGGGTCGTCGTCGTCCATGTTCTCGAACCCTTTCTTCAGTA
GCAACGGTGCTGCGTCGACGTCGACTACGGCCCCTGTTCCGCCAGGGTTC
GGCGACCTTTCGTCTGCCTCTGTCGCATCCACTCTGGTGCCGCCAGCCGT
GGCGTCCCCACCTGCAGCTGCGGTCGCGACGCTGTCTTCCCCGCAGAAGG
TGGCCGGGGCGCAGCCTGTACAGTCGTTTATCGGAGAGCACTTCGTTGGC
CTTGACGTATTCAATGAGGGTATGTTTTCTTCCTCGGCAATTGGGGGTGG
GTTGTTTGCTGGCGACCCGGGGGCAGGGGCTTCCTCATCTACTGGCAAGA
CGGATCCGGCGTCCTCCCGTGATGCTTCCTCCCGGGTCATCGTTCATGTG
GCACAGGGTTTGCTTGCTGGTCGATCGTCCTCATCGCAGGGGGATCCAAC
AGGATCGCCGTCCTTGCAACCAACTGATGCAGAGGTGTCGGTGGCTGGCC
TGTTAAAGCCGACCTCCCAAGGAGCAGGTAATGGAGTTACAGAGGGTAAT
TCCATGTCTTTTTCGCCCGCCTCAGTAGATGCTGCCACGGCGGCGGGTTC
GTCTCCGTTTGGGGCTGCTTTTGGCGGCGGTCACTTCGGTGGTGCGTTTG
GAAGTGCTTTATTTCCTGTGTCATCTCATCAAGCGGGTGGTGGGATGCAC
GGCAATGGAGTAGGAGAAACTGACGGCCCAGGGGCAGATCTCTCTGTTGA
TCCGTTCGCTAATTCGTCGGGTGCTTTGGCCGCAATGTTGGGAGTTACGT
TGCCTCCCGTGGACTCTCAAAGCTCCTTAGCGAGCAAAATGAGGTCCGGG
ACGGGAGACTCCCGCATGACCTCTGGACATGAAATGTCTCCGCAGCGCAC
ACTCACGCCCTCACAAAGGCGCTACGATGATTTTGCACCCGATGGTGTGC
GTGGCCGGGAAGGGGTTGGACATGGGCGAGGCGGGCACAGGCAAGGTTTT
GTGAGGGAAGAGGGAGGCGTAGGAGGGGCAAACGAAGCCCTGCAGGGATC
GGGGTTTCCGTTCGCCCAAGGCCTAAACCCGGGGCTACCCTTTTCGCCAG
CGAGAGGGTCACCCGCTATGGGACCAGACCCACGGGGCTCTCCTCCTGGT
GTGGGTAGCCCCCCTCACCTTGGCGCGCGTCACCATGTTCACCACCACCA
TCAATCACACGCGCACAGGCCATTCGGCGGTGCGCGCCCCCTTTCTCCCC
CAGAACTCGGCGAGTTCGCGGGGCCCAGCGATGGGCAATTTCCTCCGCAT
CATCACCACCGTCATCGTTTCCAGCACCAACAGCAACAGCAACAGCTTCC
CCCGCAGCAGCAGCAGTCACAGCAGCAGCAACCGCAGCAAGGTTACTCGA
TACAAAATGGTATGGCATTTCTGCAAAAAGTGCTACCTGGGGTATCTCTT
TCTTATGGCGATCGTCATCCGCCGGCTGGGGCCGGGGGAGGCCATGGGCA
ACAGGGGCAAGGTGCCTCGGGTGCCCCCAGTGGGCGCGTTGGTTGGGGAG
ACAATGCAGCGGGGCAACGAGTAGATCCGGCACAGGCATTCGGATCGACG
CTTTGGACAATGGCACCTGCGCCTAACGCCCCGCGCCAGCCGCAAGGAAG
CAGGGGTAGCGGATACGGTGCGTGGTGA back to top
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