mRNA_H-paniculata_contig163.3607.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig163.3607.1
Unique NamemRNA_H-paniculata_contig163.3607.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
BLAST of mRNA_H-paniculata_contig163.3607.1 vs. uniprot
Match: D7FLD9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLD9_ECTSI)

HSP 1 Score: 427 bits (1097), Expect = 1.390e-143
Identity = 231/316 (73.10%), Postives = 264/316 (83.54%), Query Frame = 1
Query:  301 MATTPLATIETQHDDMIHDTQLDYYGKRLATASSDRTVRVFEIMGENHQPMPVEVIRGHEGAVWQVAWAHPKFGVLLASCSYDGTAIIHRESPPGTWTAVHKHDLHQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHATFIQDSKLGCNAVSWAPHVSVGSKEGGREYMRLVTGSCDHRVRFWRCPVGERSWEEEGGAQDSSPQHSNWVRDVAWCPGTGVPCNVVASCCEGRGVVIWTQRQANGPWSATEMYTFPAPVWRVSWSVTGHVLAVSSGDDDVSLWKQNLEGAWECISKV-HDGGPTSRSQY 1245
            MATT L TI+T H   IHD QLDYYGK+LATASSD  + +FE++G++H    ++ + GH+G VWQV WAHPKFGVLLASCSYD + IIHRE+PPGTW+ VHKH+LH   XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  H TFIQDSKLGCN+VSWAP  S+GS+EG + YMRLVTGSCD+RVRFWRC VGE  W+E+G + DSSP+HS+WVRDVAW P TG+PCN+VASC E RGVVIWTQ QA+GPW+A EM TFPAPVWRVSWS+TG+VLAVSSGD DVSLWKQNLEGAWECIS V  + GPT    Y
Sbjct:    1 MATTALQTIDTHHSGNIHDAQLDYYGKKLATASSDCKINIFEVVGDSHHNQ-LDSLSGHDGPVWQVGWAHPKFGVLLASCSYDKSVIIHRETPPGTWSPVHKHELHTSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEWHTTFIQDSKLGCNSVSWAPFNSLGSREGEKVYMRLVTGSCDNRVRFWRCAVGETVWKEDGSSHDSSPRHSDWVRDVAWAPATGMPCNIVASCSEDRGVVIWTQSQASGPWAAAEMKTFPAPVWRVSWSITGNVLAVSSGDSDVSLWKQNLEGAWECISTVPEEAGPTPSPHY 315          
BLAST of mRNA_H-paniculata_contig163.3607.1 vs. uniprot
Match: A0A836CBZ9_9STRA (WD40-repeat-containing domain protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CBZ9_9STRA)

HSP 1 Score: 346 bits (887), Expect = 7.390e-112
Identity = 193/319 (60.50%), Postives = 230/319 (72.10%), Query Frame = 1
Query:  301 MATTPLATIETQHDDMIHDTQLDYYGKRLATASSDRTVRVFEIMGENHQPMPVEVIRGHEGAVWQVAWAHPKFGVLLASCSYDGTAIIHRESPPGTWTAVHKHDLHQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHATFIQDSKLGCNAVSWAPHVSVGSKEG--GREYMRLVTGSCDHRVRFWRCPV---------GERSWEEEGGAQDSSPQHSNWVRDVAWCPGTGVPCNVVASCCEGRGVVIWTQRQANGPWSATEMYTFPAPVWRVSWSVTGHVLAVSSGDDDVSLWKQNLEGAWECISKVHDGG 1224
            M+ + L  IETQH++MIHD QLDYY ++LATASSDRT+ +F+I GE      V  + GHEG VWQVAWAHP+FGVLLASCSYDG+ +IH ESPPG WT VH H LH XXXXXXXXXXXXXXXXXXXXXXXXXX             +  QD KLGCNAVSWAP+ S G K+   GR+ MRLVTGSCD+RVR W+CP          G+  W +E     S P H++WVRDVAW P TG+P N +ASC E + V IWTQ++    W+ T+M+ F APVWR+SWSVTG+VLAVS GDDDV+LWKQN+EG WE +S V +GG
Sbjct:    1 MSVSTLVNIETQHNEMIHDAQLDYYSRKLATASSDRTIEIFDINGEVTNRSAV--LTGHEGPVWQVAWAHPRFGVLLASCSYDGSVLIHTESPPGVWTTVHAHRLHXXXXXXXXXXXXXXXXXXXXXXXXXXXSILQHMDDDSWQVSTFQDGKLGCNAVSWAPYGSGGGKDDAMGRDVMRLVTGSCDNRVRVWKCPAPTAGEVLGQGQLVWTDE--LTHSEPAHTDWVRDVAWAPATGMPFNTIASCGEDKAVYIWTQQEGGTEWTLTKMHEFSAPVWRLSWSVTGNVLAVSHGDDDVTLWKQNIEGRWEMVSSVEEGG 315          
BLAST of mRNA_H-paniculata_contig163.3607.1 vs. uniprot
Match: A0A7S2UZ04_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UZ04_9STRA)

HSP 1 Score: 301 bits (771), Expect = 2.900e-94
Identity = 190/324 (58.64%), Postives = 228/324 (70.37%), Query Frame = 1
Query:  301 MATTPLATIETQHDDMIHDTQLDYYGKRLATASSDRTVRVFEIMGENHQPMPVEVIRGHEGAVWQVAWAHPKFGVLLASCSYDGTAIIHRESPPGTWTAVHKHDLHQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHATFIQDSKLGCNAVSWAPHVSVGSK-EGGREYMRLVTGSCDHRVRFWRCPVGERSWEEEGGAQDSSPQHSNWVRDVAWCPGTGVPCNVVASCCEGRGVVIWTQRQANGP-----------------WSATEMYTFPAPVWRVSWSVTGHVLAVSSGDDDVSLWKQNLEGAWECISKVHD 1218
            MA     TI+TQH+DMIHD Q DYY K++AT SSDRT++++++ G+ +    V  + GH+G VWQVAWAHPKFGVLLASCSYDG  IIHRESP   WT +H H  H+ XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX     QDS LGCNA+SWAP+ ++GS+ E G   MR+VTGSCD++VRFWR    ER WEEE    D    HS+WVRDVAW P +G+PCN+VAS  E   V IW Q + +G                  W    ++ F APVWRVSWSVTG+VLAVSSGD  V+LWKQ+L+G W  +S V +
Sbjct:    1 MAADQPVTIDTQHEDMIHDAQFDYYAKKVATCSSDRTIQIYDVTGDVYNKSAV--LTGHDGPVWQVAWAHPKFGVLLASCSYDGQVIIHRESPQSCWTQIHVHRFHESXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAHFQDSPLGCNAISWAPYNAIGSQNERGAVEMRVVTGSCDNKVRFWRST--ERGWEEEAKQADV---HSDWVRDVAWAPSSGMPCNLVASGSEDGQVHIWQQTETSGAPTSGGGAASSPASGQAVWQPHLVHNFGAPVWRVSWSVTGNVLAVSSGDHMVTLWKQSLDGTWFQVSSVKE 317          
BLAST of mRNA_H-paniculata_contig163.3607.1 vs. uniprot
Match: K3XB55_GLOUD (Uncharacterized protein n=2 Tax=Pythiaceae TaxID=4782 RepID=K3XB55_GLOUD)

HSP 1 Score: 298 bits (764), Expect = 1.330e-93
Identity = 173/308 (56.17%), Postives = 213/308 (69.16%), Query Frame = 1
Query:  307 TTPLATIETQHDDMIHDTQLDYYGKRLATASSDRTVRVFEIMGE--NHQPMPVEVIRGHEGAVWQVAWAHPKFGVLLASCSYDGTAIIHRESPPGTWTAVHKHDLHQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHATFIQDSKLGCNAVSWAPHVSVGSKEGGREYMRLVTGSCDHRVRFWRCPVGERSWEEEGGAQDSSPQHSNWVRDVAWCPGTGVPCNVVASCCEGRGVVIWTQRQANGPWSATEMYTFPAPVWRVSWSVTGHVLAVSSGDDDVSLWKQNLEGAWECISKVHDGG 1224
            T P+ +I+TQH+DMIHD QLDYYGKRLAT SSDRTV+V+++ GE  N++    +++ GHEG VWQVAWAHPKFG LLASCSYDG  II+RE     W   + H    XXXXXXXXXXXXXXXXXXXXXXXXX             + F +DS LGCNAVSWAP  ++GSK       R+VT SCD  ++ W    G+  W +E  +  S+P HS+WVRD AW P TG+P N++ASC E + V IW+Q + NGPW    ++TF APVWRVSWSVTG+VLAVSSGD  V+LWK+ L+  W  IS V + G
Sbjct:    2 TAPILSIDTQHEDMIHDAQLDYYGKRLATCSSDRTVKVYDVTGEVQNNE----QLLTGHEGPVWQVAWAHPKFGALLASCSYDGKVIIYREQSLNQWAQTYVHAFXXXXXXXXXXXXXXXXXXXXXXXXXXXVSVISYSTEGWSVSHF-KDSSLGCNAVSWAPFNALGSKGETGPIRRIVTASCDKTIKIWSLAEGQTEWTKEDIS--SAPAHSDWVRDAAWAPSTGMPVNLIASCSEDKHVYIWSQTEENGPWKRELLHTFEAPVWRVSWSVTGNVLAVSSGDHKVTLWKETLDKKWIQISSVDEAG 302          
BLAST of mRNA_H-paniculata_contig163.3607.1 vs. uniprot
Match: D0NKZ1_PHYIT (Protein transport protein SEC13 n=16 Tax=Peronosporaceae TaxID=4777 RepID=D0NKZ1_PHYIT)

HSP 1 Score: 296 bits (758), Expect = 1.090e-92
Identity = 169/308 (54.87%), Postives = 212/308 (68.83%), Query Frame = 1
Query:  307 TTPLATIETQHDDMIHDTQLDYYGKRLATASSDRTVRVFEIMGE--NHQPMPVEVIRGHEGAVWQVAWAHPKFGVLLASCSYDGTAIIHRESPPGTWTAVHKHDLHQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHATFIQDSKLGCNAVSWAPHVSVGSKEGGREYMRLVTGSCDHRVRFWRCPVGERSWEEEGGAQDSSPQHSNWVRDVAWCPGTGVPCNVVASCCEGRGVVIWTQRQANGPWSATEMYTFPAPVWRVSWSVTGHVLAVSSGDDDVSLWKQNLEGAWECISKVHDGG 1224
            + P+ +I+TQH+DMIHD QLDYYGKRLAT SSDRT++V+++ G+  N++    +++ GHEG VWQV+WAHPKFGVLLA+CSYDG  II+RE     WT  + H  H  XXXXXXXXXXXXXXXXXXXXXXXX             + F +DS LGCNAVSWAP  SVGS+       R++T SCD  ++ W  P GE  W ++     S P HS+WVRDVAW P TG+P N++ASC E + V IW+Q   +  W    ++TF APVWRVSWSVTG+VLAVSSGD  V+LWK+ L+  W  IS V + G
Sbjct:    2 SAPILSIDTQHEDMIHDAQLDYYGKRLATCSSDRTIKVYDVAGDVQNNE----QILTGHEGPVWQVSWAHPKFGVLLAACSYDGKVIIYREQSLNQWTQAYVHAFHDSXXXXXXXXXXXXXXXXXXXXXXXXVSVLSYSPEGWSVSHF-KDSALGCNAVSWAPFNSVGSQGPSGPIRRVMTASCDKTIKIWSLPEGETEWTKQ--ELSSVPAHSDWVRDVAWAPSTGLPVNLIASCSEDKHVYIWSQTAEDSSWKRELLHTFDAPVWRVSWSVTGNVLAVSSGDHKVTLWKETLDKKWIQISSVDEAG 302          
BLAST of mRNA_H-paniculata_contig163.3607.1 vs. uniprot
Match: H3GAW1_PHYRM (Uncharacterized protein n=7 Tax=Peronosporaceae TaxID=4777 RepID=H3GAW1_PHYRM)

HSP 1 Score: 293 bits (751), Expect = 1.200e-91
Identity = 170/308 (55.19%), Postives = 212/308 (68.83%), Query Frame = 1
Query:  307 TTPLATIETQHDDMIHDTQLDYYGKRLATASSDRTVRVFEIMGE--NHQPMPVEVIRGHEGAVWQVAWAHPKFGVLLASCSYDGTAIIHRESPPGTWTAVHKHDLHQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHATFIQDSKLGCNAVSWAPHVSVGSKEGGREYMRLVTGSCDHRVRFWRCPVGERSWEEEGGAQDSSPQHSNWVRDVAWCPGTGVPCNVVASCCEGRGVVIWTQRQANGPWSATEMYTFPAPVWRVSWSVTGHVLAVSSGDDDVSLWKQNLEGAWECISKVHDGG 1224
            + P+ +I+TQH+DMIHD QLDYYGKRLAT SSDRT++V+++ G+  N++    +++ GHEG VWQVAWAHPKFGVLLA+CSYDG  II+RE     WT  + H  H XXXXXXXXXXXXXXXXXXXXXXXXX             + F +DS LGCNAVSWAP  SVGS+       R+VT SCD  ++ W    GE  W ++     S+P H +WVRDVAW P TG+P N++ASC E + V IW+Q   +  W    ++TF APVWRVSWSVTG+VLAVSSGD  V+LWK+ L+  W  IS V + G
Sbjct:    2 SAPILSIDTQHEDMIHDAQLDYYGKRLATCSSDRTIKVYDVTGDVQNNE----QILTGHEGPVWQVAWAHPKFGVLLAACSYDGKVIIYREQSLNQWTQAYMHGFHXXXXXXXXXXXXXXXXXXXXXXXXXXVSVLSYSPEGWSVSHF-KDSALGCNAVSWAPFNSVGSQGPTGPIRRVVTASCDKTIKIWSLQEGETEWTKQ--ELSSAPAHGDWVRDVAWAPSTGLPVNLIASCSEDKHVYIWSQTAEDTVWKRELLHTFDAPVWRVSWSVTGNVLAVSSGDHKVTLWKETLDKKWIQISSVDEAG 302          
BLAST of mRNA_H-paniculata_contig163.3607.1 vs. uniprot
Match: A0A3M6VUN6_9STRA (Uncharacterized protein n=3 Tax=Peronosporaceae TaxID=4777 RepID=A0A3M6VUN6_9STRA)

HSP 1 Score: 294 bits (753), Expect = 8.100e-89
Identity = 169/308 (54.87%), Postives = 214/308 (69.48%), Query Frame = 1
Query:  307 TTPLATIETQHDDMIHDTQLDYYGKRLATASSDRTVRVFEIMGE--NHQPMPVEVIRGHEGAVWQVAWAHPKFGVLLASCSYDGTAIIHRESPPGTWTAVHKHDLHQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHATFIQDSKLGCNAVSWAPHVSVGSKEGGREYMRLVTGSCDHRVRFWRCPVGERSWEEEGGAQDSSPQHSNWVRDVAWCPGTGVPCNVVASCCEGRGVVIWTQRQANGPWSATEMYTFPAPVWRVSWSVTGHVLAVSSGDDDVSLWKQNLEGAWECISKVHDGG 1224
            + P+ +I+TQH+DMIHD QLDYYGKRLAT SSDRT++V+++ G+  N++    +++ GHEG VWQV+WAHPKFGVLLA+CSYDG  II+RE     WT  + H +  XXXXXXXXXXXXXXXXXXXXXXXXX             + F +DS LGCNAVSWAP  SVGS+       R+VT SCD  ++ W    GE+ W ++     S+P HS+WVRDVAW P TG+P N++ASC E + V IW+Q   +  W    ++TF APVWRVSWSVTG+VLAVSSGD  V+LWK+ L+  W  IS V + G
Sbjct:    2 SAPILSIDTQHEDMIHDAQLDYYGKRLATCSSDRTIKVYDVTGDVQNNE----QILTGHEGPVWQVSWAHPKFGVLLAACSYDGKVIIYREQSLNQWTQAYVHAIXXXXXXXXXXXXXXXXXXXXXXXXXXXVSVLSYSPEGWSVSHF-KDSALGCNAVSWAPFNSVGSQSPAGPIRRVVTASCDKTIKIWSLTEGEKEWTKQ--ELSSAPAHSDWVRDVAWAPSTGLPVNLIASCSEDKHVYIWSQSAEDSAWKRELLHTFDAPVWRVSWSVTGNVLAVSSGDHKVTLWKETLDKKWIQISSVDEAG 302          
BLAST of mRNA_H-paniculata_contig163.3607.1 vs. uniprot
Match: A0A2D4BZT8_PYTIN (Protein transport protein SEC13 n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BZT8_PYTIN)

HSP 1 Score: 296 bits (757), Expect = 1.750e-87
Identity = 174/317 (54.89%), Postives = 214/317 (67.51%), Query Frame = 1
Query:  250 ENKQRALR*ALPASRRTMATTPLATIETQHDDMIHDTQLDYYGKRLATASSDRTVRVFEIMGE--NHQPMPVEVIRGHEGAVWQVAWAHPKFGVLLASCSYDGTAIIHRESPPGTWTAVHKHDLHQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHATFIQDSKLGCNAVSWAPHVSVGSKEGGREYMRLVTGSCDHRVRFWRCPVGERSWEEEGGAQDSSPQHSNWVRDVAWCPGTGVPCNVVASCCEGRGVVIWTQRQANGPWSATEMYTFPAPVWRVSWSVTGHVLAVSSGDDDVSLWKQNLEGAW 1194
            EN    +   LP    TM T P+ +I+TQH+DMIHD QLDYYGKRLAT SSDRT++V+++ G+  N++    +++ GHEG VWQV+WAHPKFGVLLASCSYDG  II +E     WT  + H    XXXXXXXXXXXXXXXXXXXXXXXXXX            + F +DS LGC AVSWAP  S+GSK       R+VT SCD  ++ W  P G   W ++     S+P H +WVRD AW PGTG+P N++ASC E + V IWTQ + NGPW    ++ F APVWRVSWSVTG+VLAVSSGD  V+LWK+ L+  W
Sbjct:  118 ENLNHCIACPLPTPATTM-TAPILSIDTQHEDMIHDAQLDYYGKRLATCSSDRTIKVYDVTGDVQNNE----QILSGHEGPVWQVSWAHPKFGVLLASCSYDGKVIIFKEQSLNQWTQAYVHAFXXXXXXXXXXXXXXXXXXXXXXXXXXXXSVLSYTAEGWVVSHF-KDSSLGCXAVSWAPFNSLGSKNEAGPIKRVVTASCDKTIKIWSLPEGHTEWTKQ--EISSAPAHVDWVRDAAWAPGTGMPVNIIASCSEDKHVYIWTQSEENGPWKRELLHVFDAPVWRVSWSVTGNVLAVSSGDHKVTLWKETLDKKW 426          
BLAST of mRNA_H-paniculata_contig163.3607.1 vs. uniprot
Match: A0A7S2JUM7_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2JUM7_9STRA)

HSP 1 Score: 279 bits (714), Expect = 8.540e-86
Identity = 162/313 (51.76%), Postives = 215/313 (68.69%), Query Frame = 1
Query:  301 MATTPL-ATIETQHDDMIHDTQLDYYGKRLATASSDRTVRVFEIMGENHQPMPVEVIRGHEGAVWQVAWAHPKFGVLLASCSYDGTAIIHRE-SPPGTWTAVHKHDLHQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHATFIQDSKLGCNAVSWAPHVSVGSKEGGREYMRLVTGSCDHRVRFWRCPVGERSWEEEG-GAQDSSPQHSNWVRDVAWCPGTGVPCNVVASCCEGRGVVIWTQRQANGP-WSATEMYTFPAPVWRVSWSVTGHVLAVSSGDDDVSLWKQNLEGAWECISKVHDGGP 1227
            +ATTP   +I+TQHDDM+HD QLDYYG +LAT SSDRTV+V+ +  ++ +      + GHEG V+++AWAHPKFG +LAS S+DG+ ++HRE  P G+WT VH H +H XXXXXXXXXXXXXXXXXXXXXXXX              ATF QD+ LG N+VS+AP   + + +  ++ MRLV G CD++VRFW+     ++WE++   +  +   H++WVRDVAW P T    N VASC E + V+IWTQ + +   W    ++TF APVWRVSWSVTG +LAVSSGD DV++WKQ L+G W  ++ V D  P
Sbjct:   19 VATTPAPVSIDTQHDDMVHDAQLDYYGVKLATCSSDRTVKVYSV-AKDQEVSHTATLTGHEGPVYEIAWAHPKFGSILASSSFDGSVLLHREVQPMGSWTLVHAHRMHXXXXXXXXXXXXXXXXXXXXXXXXXKVSVITHREDDSWDATFFQDNMLGVNSVSFAPCSFMSASDDAKDGMRLVVGGCDNKVRFWKLNAETKTWEQDDFDSSKADVTHTDWVRDVAWAP-TVSSFNTVASCSEDKTVIIWTQSEDDRTEWKPVLLHTFDAPVWRVSWSVTGTILAVSSGDSDVTMWKQELDGKWSQVASVEDSQP 329          
BLAST of mRNA_H-paniculata_contig163.3607.1 vs. uniprot
Match: A0A7R9ZAI8_9STRA (Hypothetical protein n=3 Tax=Odontellaceae TaxID=2749909 RepID=A0A7R9ZAI8_9STRA)

HSP 1 Score: 275 bits (702), Expect = 1.100e-83
Identity = 148/307 (48.21%), Postives = 192/307 (62.54%), Query Frame = 1
Query:  325 IETQHDDMIHDTQLDYYGKRLATASSDRTVRVFEIMGENHQPMPVEVIRGHEGAVWQVAWAHPKFGVLLASCSYDGTAIIHRESPPGTWTAVHK-HDLHQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHATFIQDSKLGCNAVSWAPHV---SVGSKEG----GREYMRLVTGSCDHRVRFWRCPVGERSWEEEGGAQDSSPQHSNWVRDVAWCPGTGVPCNVVASCCEGRGVVIWTQRQANGP-WSATEMYTFPAPVWRVSWSVTGHVLAVSSGDDDVSLWKQNLEGAWECISKVHD 1218
            ++TQHDDM+HD QLDYYG +LAT+SSDRT++++++ G +        ++GHEG VW+V+W+HPKFG++LASCS+DG+ +IHRES P  WT +H    LH            XXXXXXXXXXXXXX               +I+D+ LG NAVSWAP+      G+ EG          +VTG CD+R+RFW        WEEE GA    P H++WVRDVAW P      +VVASC E + V++WT+    G  W    ++ F APVWR+SWSVTG VLAVSSGD  V+LWK  L+G W  +S V D
Sbjct:   39 VDTQHDDMVHDAQLDYYGCKLATSSSDRTIKIYDVSGNSFAH--TATLQGHEGPVWEVSWSHPKFGIVLASCSFDGSVLIHRESRPREWTLLHAARGLHDSSVNGVAFAPHXXXXXXXXXXXXXXVSVLTHNEDDTWGVEYIRDNSLGVNAVSWAPYAPFNEAGAGEGEGVAAAPQPTVVTGGCDNRIRFWTRSAQNGQWEEEPGALGPGPAHTDWVRDVAWAPAIIPGVDVVASCSEDKTVIVWTRTGGRGSSWEPKLLHAFEAPVWRLSWSVTGSVLAVSSGDSSVTLWKAGLDGVWRRVSHVED 343          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig163.3607.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FLD9_ECTSI1.390e-14373.10Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A836CBZ9_9STRA7.390e-11260.50WD40-repeat-containing domain protein n=1 Tax=Trib... [more]
A0A7S2UZ04_9STRA2.900e-9458.64Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
K3XB55_GLOUD1.330e-9356.17Uncharacterized protein n=2 Tax=Pythiaceae TaxID=4... [more]
D0NKZ1_PHYIT1.090e-9254.87Protein transport protein SEC13 n=16 Tax=Peronospo... [more]
H3GAW1_PHYRM1.200e-9155.19Uncharacterized protein n=7 Tax=Peronosporaceae Ta... [more]
A0A3M6VUN6_9STRA8.100e-8954.87Uncharacterized protein n=3 Tax=Peronosporaceae Ta... [more]
A0A2D4BZT8_PYTIN1.750e-8754.89Protein transport protein SEC13 n=1 Tax=Pythium in... [more]
A0A7S2JUM7_9STRA8.540e-8651.76Hypothetical protein n=1 Tax=Leptocylindrus danicu... [more]
A0A7R9ZAI8_9STRA1.100e-8348.21Hypothetical protein n=3 Tax=Odontellaceae TaxID=2... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig163contigH-paniculata_contig163:1623..7997 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score427.6
Seed ortholog evalue5.2e-117
Seed eggNOG ortholog2880.D7FLD9
Preferred nameSEC13
KEGG koko:K14004
KEGG Pathwayko03013,ko04141,ko04150,map03013,map04141,map04150
KEGG ModuleM00404,M00427
Hectar predicted targeting categoryother localisation
GOsGO:0000070,GO:0000278,GO:0000280,GO:0000323,GO:0000785,GO:0000819,GO:0002164,GO:0002165,GO:0002168,GO:0002376,GO:0002474,GO:0002478,GO:0002495,GO:0002504,GO:0003002,GO:0003674,GO:0003682,GO:0005198,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005635,GO:0005643,GO:0005654,GO:0005694,GO:0005700,GO:0005703,GO:0005730,GO:0005737,GO:0005764,GO:0005765,GO:0005773,GO:0005774,GO:0005783,GO:0005789,GO:0005798,GO:0005829,GO:0006323,GO:0006355,GO:0006357,GO:0006508,GO:0006511,GO:0006606,GO:0006807,GO:0006810,GO:0006886,GO:0006888,GO:0006900,GO:0006901,GO:0006903,GO:0006913,GO:0006950,GO:0006996,GO:0006997,GO:0007049,GO:0007059,GO:0007076,GO:0007275,GO:0007346,GO:0007389,GO:0007591,GO:0008104,GO:0008150,GO:0008152,GO:0008363,GO:0009056,GO:0009057,GO:0009266,GO:0009408,GO:0009628,GO:0009719,GO:0009725,GO:0009790,GO:0009791,GO:0009792,GO:0009889,GO:0009891,GO:0009892,GO:0009893,GO:0009966,GO:0009967,GO:0009987,GO:0010033,GO:0010243,GO:0010468,GO:0010498,GO:0010556,GO:0010557,GO:0010564,GO:0010604,GO:0010605,GO:0010628,GO:0010629,GO:0010646,GO:0010647,GO:0010973,GO:0012505,GO:0012506,GO:0012507,GO:0014070,GO:0015031,GO:0015833,GO:0016020,GO:0016043,GO:0016050,GO:0016192,GO:0017038,GO:0019219,GO:0019222,GO:0019538,GO:0019882,GO:0019884,GO:0019886,GO:0019941,GO:0022402,GO:0022607,GO:0023051,GO:0023056,GO:0030117,GO:0030120,GO:0030127,GO:0030133,GO:0030134,GO:0030135,GO:0030163,GO:0030261,GO:0030433,GO:0030658,GO:0030659,GO:0030660,GO:0030662,GO:0031080,GO:0031081,GO:0031090,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0031334,GO:0031410,GO:0031503,GO:0031967,GO:0031974,GO:0031975,GO:0031981,GO:0031982,GO:0031984,GO:0032006,GO:0032008,GO:0032465,GO:0032467,GO:0032501,GO:0032502,GO:0032870,GO:0032954,GO:0032955,GO:0032991,GO:0033036,GO:0033365,GO:0033554,GO:0033993,GO:0034504,GO:0034605,GO:0034613,GO:0034622,GO:0034629,GO:0034976,GO:0035017,GO:0035075,GO:0035077,GO:0035079,GO:0035293,GO:0035459,GO:0035859,GO:0036314,GO:0036315,GO:0036503,GO:0040003,GO:0042175,GO:0042221,GO:0042303,GO:0042335,GO:0042337,GO:0042802,GO:0042886,GO:0043085,GO:0043087,GO:0043161,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043254,GO:0043547,GO:0043632,GO:0043933,GO:0044085,GO:0044087,GO:0044089,GO:0044093,GO:0044237,GO:0044238,GO:0044248,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0044422,GO:0044424,GO:0044425,GO:0044427,GO:0044428,GO:0044432,GO:0044433,GO:0044437,GO:0044444,GO:0044446,GO:0044464,GO:0045184,GO:0045787,GO:0045893,GO:0045931,GO:0045935,GO:0045944,GO:0046907,GO:0048002,GO:0048193,GO:0048194,GO:0048199,GO:0048207,GO:0048208,GO:0048285,GO:0048475,GO:0048518,GO:0048519,GO:0048522,GO:0048583,GO:0048584,GO:0048856,GO:0050789,GO:0050790,GO:0050794,GO:0050896,GO:0051128,GO:0051130,GO:0051169,GO:0051170,GO:0051171,GO:0051173,GO:0051179,GO:0051234,GO:0051252,GO:0051254,GO:0051276,GO:0051302,GO:0051336,GO:0051345,GO:0051603,GO:0051640,GO:0051641,GO:0051648,GO:0051649,GO:0051650,GO:0051656,GO:0051664,GO:0051668,GO:0051716,GO:0051726,GO:0051781,GO:0060255,GO:0060260,GO:0060261,GO:0061024,GO:0061700,GO:0065003,GO:0065007,GO:0065009,GO:0070013,GO:0070727,GO:0070887,GO:0071103,GO:0071310,GO:0071390,GO:0071396,GO:0071407,GO:0071495,GO:0071702,GO:0071704,GO:0071705,GO:0071840,GO:0071944,GO:0072594,GO:0080090,GO:0090068,GO:0090110,GO:0090114,GO:0097305,GO:0097306,GO:0097708,GO:0098588,GO:0098687,GO:0098796,GO:0098805,GO:0098813,GO:0098827,GO:0098852,GO:0140014,GO:1901564,GO:1901565,GO:1901575,GO:1901654,GO:1901655,GO:1901698,GO:1901700,GO:1901701,GO:1901891,GO:1901893,GO:1902412,GO:1902531,GO:1902533,GO:1902680,GO:1903047,GO:1903432,GO:1903436,GO:1903438,GO:1903490,GO:1903506,GO:1903508,GO:1904263,GO:1990893,GO:2000112,GO:2000142,GO:2000144,GO:2001141
EggNOG free text desc.positive regulation of TORC1 signaling
EggNOG OGsKOG1332@1,KOG1332@2759
Ec32 ortholog descriptionWD40 repeat
Ec32 orthologEc-12_007790.1
COG Functional cat.U
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko03019,ko04131
Exons3
Model size1771
Cds size948
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig163.3607.1prot_H-paniculata_contig163.3607.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig163 2146..7697 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929299.1582873-UTR-H-paniculata_contig163:1622..21451622929299.1582873-UTR-H-paniculata_contig163:1622..2145Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig163 1623..2145 -
1691480806.1329947-UTR-H-paniculata_contig163:1622..21451691480806.1329947-UTR-H-paniculata_contig163:1622..2145Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig163 1623..2145 -
1622929299.227022-UTR-H-paniculata_contig163:7697..79971622929299.227022-UTR-H-paniculata_contig163:7697..7997Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig163 7698..7997 -
1691480806.1845772-UTR-H-paniculata_contig163:7697..79971691480806.1845772-UTR-H-paniculata_contig163:7697..7997Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig163 7698..7997 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929299.1751263-CDS-H-paniculata_contig163:2145..25181622929299.1751263-CDS-H-paniculata_contig163:2145..2518Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig163 2146..2518 -
1691480806.1436408-CDS-H-paniculata_contig163:2145..25181691480806.1436408-CDS-H-paniculata_contig163:2145..2518Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig163 2146..2518 -
1622929299.1954038-CDS-H-paniculata_contig163:3585..38251622929299.1954038-CDS-H-paniculata_contig163:3585..3825Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig163 3586..3825 -
1691480806.1539855-CDS-H-paniculata_contig163:3585..38251691480806.1539855-CDS-H-paniculata_contig163:3585..3825Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig163 3586..3825 -
1622929299.2128258-CDS-H-paniculata_contig163:7362..76971622929299.2128258-CDS-H-paniculata_contig163:7362..7697Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig163 7363..7697 -
1691480806.171007-CDS-H-paniculata_contig163:7362..76971691480806.171007-CDS-H-paniculata_contig163:7362..7697Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig163 7363..7697 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig163.3607.1

>prot_H-paniculata_contig163.3607.1 ID=prot_H-paniculata_contig163.3607.1|Name=mRNA_H-paniculata_contig163.3607.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=316bp
MATTPLATIETQHDDMIHDTQLDYYGKRLATASSDRTVRVFEIMGENHQP
MPVEVIRGHEGAVWQVAWAHPKFGVLLASCSYDGTAIIHRESPPGTWTAV
HKHDLHQSSVNSIAWAPHELGLILACASSDGRVSILQHQPNDEWHATFIQ
DSKLGCNAVSWAPHVSVGSKEGGREYMRLVTGSCDHRVRFWRCPVGERSW
EEEGGAQDSSPQHSNWVRDVAWCPGTGVPCNVVASCCEGRGVVIWTQRQA
NGPWSATEMYTFPAPVWRVSWSVTGHVLAVSSGDDDVSLWKQNLEGAWEC
ISKVHDGGPTSRSQY*
back to top

mRNA from alignment at H-paniculata_contig163:1623..7997-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig163.3607.1 ID=mRNA_H-paniculata_contig163.3607.1|Name=mRNA_H-paniculata_contig163.3607.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=6375bp|location=Sequence derived from alignment at H-paniculata_contig163:1623..7997- (Halopteris paniculata Hal_grac_a_UBK monoicous)
AGGGGTTGCCTCGGAGGAAAAGAGTGTGCGAAGTGAAGCTGAGGCTGCAG CAGGGCAGGTGGTTGCTCACAAGGAAGCGATTATCCAACCGATCAAGAAT TCGTCGGGTTTTAATTTAGATTTGTCGAGATCGGTTCCAAAGGGGGCAAG ACACTCCGGAGTTCAAGTCGATCAGTTCAGAATCTCAGGGACTTTCCCTA CACTCCACTGCGGTCGTGAAGTGTTAACTGCTTGAGTTCTCGATACAGAG AGAACAAACAGCGTGCGCTTCGTTGAGCTCTTCCAGCAAGCAGGAGAACC ATGGCAACCACTCCACTAGCCACGATAGAGACACAGCACGATGACATGAT CCACGACACGCAACTCGACTATTACGGCAAGCGCCTTGCCACGGCGTCCA GCGACCGCACGGTCAGAGTGTTCGAGATCATGGGCGAGAACCACCAGCCG ATGCCGGTCGAAGTCATCAGAGGCCATGAGGGCGCAGTGTGGCAGGTGGC CTGGGCGCACCCTAAGTTTGGCGTACTATTGGCATCTTGCTCGTACGATG GTACCGCGATCATCCATCGAGAGTCGCCACCCGGAACGTGGACCGCCGTG CACAAGCACGACCTTCACCAATCAAGCGTGAACAGGTGCGGTTCTGCAGT GTTAATATGAATGTTTCCACAAGCTTACTTGCAATATGTGATGCATGCTG CTACTCTACCGATTTGCAAGTGCTGGTGGTGTTGAGCATCCGTTCAGTAT ATGATCCTCAGAACTATACGCGACGTACTGAACGCCCCGACAACATGTGC GACATCGAGCGTGGGGTGTGTGCCCACGTGTCTAGTTAACGTGTAGTGTA TTCTGTCTTGACAAAATATTGGAAAGTCGTCGTCGTTGTTTCGGAACAGC TTCTTAATTCTATACTCGAGCAACTTTTGAAAGAGAAATACTCTTGCCAG CGTTGCGAGCCACCACGGTGAAAGCAGTGAGTAAATACCTTGTGCGGTGG TCAAGGACGAAGCACGGACTGCAGGGGAGTAGGAAAGGCTGTGTCTTATC GAGGCATTCAAAAGTGAATTTCCGTTTTCAAGACAATGATAAAATTATCT TCCGAATATCTTGTTTAGAGTCGAGCAGACGAGCTGTGTAGGCACATATC GAATTTATTCTGAGCAGGACCGTTCTAAATGGTTCAGTGACCAGGGTGCA ACATAGACAGGACCTGGGAAACGTCGCAACTGCAGGTAGTCACAGACAAC ACGCACAGAGACACACGGTACACGCGCACCAGCTGGGATGATAGACCTTG ATCAGCTCGATACACCAACCTCTTTTGACGCTAATCCGTCGTGTATTGGG GAAGTTATAGGATATCACCTCCATTTGCGATTATGAAAGGCACCGTTTCT CCTTGTTTTCCTTCATATCTAGGATGGTTTTAGCCGAACCAAGTGCACGA TGCTCACTTGATGAGAACCGACAGATAAGCGTTTTGGTGTTTGGGGGGCA AAGAAGCTCTCTCTCACTCTCACCACCGTTAGGGTTACATTCCTTGTCAC CCACTTGCAATTCACGGATTTCGGTCGACATGTTCGGCCCTTGGTTGTGC TGCCCACTTTGCTTTTTCAGCTATTCCAGTCACGGGCATTTCGTTTTGAT TTTGGCGTCCACAGCGACCATTTTTTTTTGTTAAAAATCGACTCCCCAGA CAACTGTGAATGAAGCATTCGCAAACATCTCGAACTACCATTATTTGTCT TGCGTTCATACGTATTTGTTCGTTTACAAGTCTACGAATGAGGTGGTCAC CAGGTCGGCGAACAGTCACACATGCACGTCCTGTTTATTCTCTGGATGGT ACTGGTACAGATTGAATCCTCTATCTGCCCCATTGTACATGGAGTACACT GCATATTATTCGCATCACGTGGACTTCTTCCCGAACTCAAAACAGATTTC TCTCGTTTATGCGTGTCCTGTATTCGTATTTTGTCGGGGGGGAGTGAAAA GATCCTGGGGAGTTTTGAAAAAACGCGTGGAATAGCCTTCAGCAAAAGAT TGAAAAATCTCAATGATCGACTGGTCACAGAACAATTTCGTTTTTCTTTG CCTCAACAAGGTACAGCCTAACCTCCACTCTACTACTGTCAATAGTCGTA TACGAGTGTATTAAATTAGGAACAAAGGCATGCAGTTCGCCTCTGACGAC TGAAAGTTGGTATCTTGACTTGTCTATTATTACGGTCGCTCCTAACGCTT GAATCCCCGAACCGGATCTAACACCCCCCCCTCCCCCCAGGATCCCCACT TGAAAACAGGCACGCATCGGTCGAAATTTTCTTATAACACGGCGCGTACG ACACAATTACAAGGTTCAAAGGCTGAGAATATAGACTAGTCATGTTAAAT ACCATAAACAAGAGAGCAAAGGTGCCATGATACTGAGCGTTATGACTGCA GCACTAGGGAGATGAAAGGAACACAAAGCCGCGTACGAGAAGCATGGAAT CTAAGGCCCCACGTGCCCCATGACCATTGTGTAAATGATAAGGCAGACTG CTCTGAAAATCATCCTTGGGTCCGATTAGTTTGCACCCCTTCTGACCCGC GGATTGGGATCAGGCGGAGATCAGAGAAGAAAAAACTTCAAAACAACGTG GATAATGCATCCGTTCAAAGGTTGAATGATTGGCTGGTACAGCTATCCCC CCCATACACACGTTTTTGATCAGCCTGAACCCATGCCACGGTATGGTCGT GATCCAGAATTGTAATCCGTTTTCGGCGGACTGATAAAGGCCATTTTTGC TCTTAAGTCGGATCCAGGGGTAAAAGAGGTAAGATTAAATTAGGTGGTCT ACACTTCGCCATCGAACTGACATGCAAGGGTTGACGTGCGGCTCAACAGC TAACCCTTGCAGACCGTGCAATCTTTGCGACGAACAGACAGATCTTGATC CTTTTTCACGCTGGAAGTTGCTTTGGAAGTAGAAAAATATCTGACAACTA ATGTCAAGAGCATTTTAGTCTTTGCGAGCAGAATTGCCCATATTAACAAC GTCATGTCTGTGGTATATATATATTGTATGTAGTACATAAGCTATCAGTC CGAACAGGCGCAGCTAACTACCTATCCGAGTAACCAGTCCATTTCGAGGT AGGGATAAGATGGGGCATAGATGAAACACGGCGCTCAGAGGGTTTACAGA CTGAAGTAGGTAATCTTTGGACTGATGTTTATAGATGCAGCGAAATCACA CACATCAGAGCACACTGTGGTGTTCCCACGCAAAGGGCTACTGTGGCGAA AAAATACCGTAGGTGGTGCCTGTTGTGGTCGTGAGTCAGTGATATGCTGC GCTACTTGGCTTCTCGAGAACAGAGCAACATCGCGCGCTGCCCACCATCC GCCAAAGCATTCTCTAGTTTGATCGGGGCACACGCGCTCCACTTCGTGAT GTTATGTTCTAGCCCGCATTTGTCCTATCTTGGATCATTTTTTTACGGAA TGTCTGTCAATCATGTGTTGCATGCAGCGCGCGGTGCGCTCATCACGGCT TGTAAGTTCGCGGTAGTCATCTACATATGGAGATGAGTGTCGATTCCTCC ATAAGCCCCGAGATGTAGTAGATGCTGGCTGGGCAGAGGGAACGGTGCCT GCTCAAGTAGCCATCATGTTTTGCAGCTAGTACTCTAGCTATTTGTTGTA TCAAGGAAGCTTTTTTTCGTGTTTGTGCGCACAAGGGGGGCAGCGAAGGT GTTTTGAAAACGATTCGTAACGGTCGGTGTCGACCAAGTTGAACCAACAA AATGAGTCTTTCGCATCGGCCCTATTGCGAAAGCTGTACGCTCATGTGGT GTTTATTGGTGGAGGTTCGTGCGTCAAGAGCAAACGCTCCGATGCTTGCT TGTTGTCCCTCTGGAGTGTACCAATGTTAACGAACTGTCACACACGCTCT CCCTTGCGTGCTACATGCGCAGCGGCGATTGGGTATAGGGTGCGCCACTA CTTCTGATCTGTGGCAAGGATCATGTGTGTCTTATCTCTAGATGAATTTC CGACCTCTACAAACAGAAAAACAGATATCCGGGCGATGAAACGCAAGACT GAATTTTGTTCTCGTCCCAACTGCCGATTGTTCATGTCTTGCCTCTCGTG TGTTTGTTGGTTGACCCTACAGCATAGCGTGGGCGCCCCATGAGCTAGGA TTGATCCTCGCATGCGCATCCAGCGACGGCCGGGTTAGTATTTTGCAGCA CCAACCGAACGATGAATGGCATGCGACCTTTATCCAGGACTCCAAGTTGG GATGCAACGCTGTGAGCTGGGCACCGCACGTGAGTGTGGGCTCTAAGGAA GGAGGAAGGGAGTACATGCGGCTGGTGACCGGAAGCTGCGACCACCGCGT GAGGTTTTGGCGGTAAGTACTCATCGAAGCGCCTTGAAATTTTCTGGCAT AGAGGCTGGTACTGTTTTGTATATACTAGTGCCTAAGATACTATATTGAT GACGATTTGCGCACAAGTTTGGCCATGGCCCCGACACGGACTATATGCTA TCCTTAACCCAAACCCAACCCCGTCAACCTCATGTGCTTTGGCAGAGCGT ACTTATCTGGGTTGATGGCGTTGGCACAGTGTATATCTCGGTTAACTGCG TTGGCAAATCGTACACCCGACCAAACGTTGTTAGCAGCACACACGTGACT AACTGTCAAGGGCCGGAGCAGGGTGCCTGCTGTAGTTCCTCTGTGTGTGC TGTCGTTGTCCAAGAGTAGCCGTTTTGTTCCATGCACTCCTGGGTATAAG TATAATATTTTGGGGAAAGTAGACGTCTCCAATAATACCATCATGTAGCT ATTGCGATATGGGTTAATGAACGGCATTGATGCGTAGTGGTTTCAGAGGA TGACCAAAAGGTTTTTGTCGTTTGGTAATAATGGATTCATCTCATGTTTA CTGGTAGTTGTGACGTCACTGAGTGGTCGTCTTGGCCCAGTGATGAATTA CTCTCAACGTTTCCTTGGTTCATTGACACTAGTTGAAGATGAGGCAAGCT TTGCTCTTGTTTTCGAGATCTAAGAAGAAAAATACCGTCTTCAAAACCAC GGTCCGGGGCTAGTGGAATTTCACAAGCTGGATATAATGAGTGTTGAGGT AATTCAACTTGGCATATTAATGAGATCGTCGAGGCACAAATAATGGTATG TTGTAAAATACCTCAGAACAGATGTCCAAAACACGCTTTTGGCCCAAATC GACGCTTATTCAAGATCTGTCAACTCATATTGAGACCACGGGGGGGGGGG GGGGGGGGGGGGGGGGCTAGAGTTGTCGCAACAGTATCAGAAATCCGTGC TGGTTCTGCTCGCGTTGGGGAACCAGAACGTAAATCATGGAACTAAAATC ATAAACAGACCTCGTCTGTACAGCATGGTATGGAAATATGGAGTATCAAC TGTCGAATTGTTGTCGACTCCGCGTGCAGATGCCCCGTGGGAGAACGTTC TTGGGAGGAAGAGGGTGGCGCTCAGGATTCCTCTCCCCAACACTCGAACT GGGTACGTGACGTTGCGTGGTGTCCCGGAACCGGAGTGCCTTGCAACGTA GTAGCCAGCTGCTGTGAAGGAAGGGGAGTGGTGATCTGGACACAAAGGCA GGCTAACGGGCCGTGGTCGGCTACCGAAATGTACACTTTTCCGGCGCCCG TCTGGCGAGTCTCTTGGTCTGTTACCGGACACGTTTTAGCTGTCTCTTCG GGGGATGATGACGTGTCTCTGTGGAAGCAAAATTTGGAAGGTGCATGGGA ATGTATCTCAAAAGTGCACGACGGTGGGCCAACATCCAGGTCCCAGTACT GAGTGTACAGGTTTGGGGGGAGGGGAGAAGTTGTCTGTGCGATAAAATGT CGCAGCATCGTAGTAACAGATGAAATTTGTGTTTCTTGTGTTTTCCGTGC TCACGTGCGTCCTCAGCGTTGTTGCGGGCTGTTTATTTTGTTCAGCGGTA ATGCGTTTGATTGTTGCAAGCCCTGAGGCACATTCGGTAGATGTGTCTCC GAAGTATTAAGCTGTAATCCTTGTTAGGGTTTCAACGTACGGCGCGTGGG TATGTTCGCTTCGTGGACCCTGAATGCGACAAAGCTTGTTCCCGTACTGT TATCTGGCTTTTTTCCACCTGCGTCCGGGCCACCACGGAAATAAACATTG AACACTAGCCAAACATAACCAAGGCTACGCTCGTCGATCAATCAGTGCTC CTCTGATCGAATGAAATTCTCTCACCTCTTCACAGAGAAAATAGATAATA TCTCGGGTGAATCGATGCCTGTTGGAAAGGTGCAAACCTGGAACCTTGTC ACGGAGAAGCTGTAGACGGATAGAG
back to top

Coding sequence (CDS) from alignment at H-paniculata_contig163:1623..7997-

>mRNA_H-paniculata_contig163.3607.1 ID=mRNA_H-paniculata_contig163.3607.1|Name=mRNA_H-paniculata_contig163.3607.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1896bp|location=Sequence derived from alignment at H-paniculata_contig163:1623..7997- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGGCAACCACTCCACTAGCCACGATAGAGACACAGCACGATGACATGAT
CCACGACACGCAACTCGACTATTACGGCAAGCGCCTTGCCACGGCGTCCA
GCGACCGCACGGTCAGAGTGTTCGAGATCATGGGCGAGAACCACCAGCCG
ATGCCGGTCGAAGTCATCAGAGGCCATGAGGGCGCAGTGTGGCAGGTGGC
CTGGGCGCACCCTAAGTTTGGCGTACTATTGGCATCTTGCTCGTACGATG
GTACCGCGATCATCCATCGAGAGTCGCCACCCGGAACGTGGACCGCCGTG
CACAAGCACGACCTTCACCAATCAAGCGTGAACAGATGGCAACCACTCCA
CTAGCCACGATAGAGACACAGCACGATGACATGATCCACGACACGCAACT
CGACTATTACGGCAAGCGCCTTGCCACGGCGTCCAGCGACCGCACGGTCA
GAGTGTTCGAGATCATGGGCGAGAACCACCAGCCGATGCCGGTCGAAGTC
ATCAGAGGCCATGAGGGCGCAGTGTGGCAGGTGGCCTGGGCGCACCCTAA
GTTTGGCGTACTATTGGCATCTTGCTCGTACGATGGTACCGCGATCATCC
ATCGAGAGTCGCCACCCGGAACGTGGACCGCCGTGCACAAGCACGACCTT
CACCAATCAAGCGTGAACAGCATAGCGTGGGCGCCCCATGAGCTAGGATT
GATCCTCGCATGCGCATCCAGCGACGGCCGGGTTAGTATTTTGCAGCACC
AACCGAACGATGAATGGCATGCGACCTTTATCCAGGACTCCAAGTTGGGA
TGCAACGCTGTGAGCTGGGCACCGCACGTGAGTGTGGGCTCTAAGGAAGG
AGGAAGGGAGTACATGCGGCTGGTGACCGGAAGCTGCGACCACCGCGTGA
GGTTTTGGCGCATAGCGTGGGCGCCCCATGAGCTAGGATTGATCCTCGCA
TGCGCATCCAGCGACGGCCGGGTTAGTATTTTGCAGCACCAACCGAACGA
TGAATGGCATGCGACCTTTATCCAGGACTCCAAGTTGGGATGCAACGCTG
TGAGCTGGGCACCGCACGTGAGTGTGGGCTCTAAGGAAGGAGGAAGGGAG
TACATGCGGCTGGTGACCGGAAGCTGCGACCACCGCGTGAGGTTTTGGCG
ATGCCCCGTGGGAGAACGTTCTTGGGAGGAAGAGGGTGGCGCTCAGGATT
CCTCTCCCCAACACTCGAACTGGGTACGTGACGTTGCGTGGTGTCCCGGA
ACCGGAGTGCCTTGCAACGTAGTAGCCAGCTGCTGTGAAGGAAGGGGAGT
GGTGATCTGGACACAAAGGCAGGCTAACGGGCCGTGGTCGGCTACCGAAA
TGTACACTTTTCCGGCGCCCGTCTGGCGAGTCTCTTGGTCTGTTACCGGA
CACGTTTTAGCTGTCTCTTCGGGGGATGATGACGTGTCTCTGTGGAAGCA
AAATTTGGAAGGTGCATGGGAATGTATCTCAAAAGTGCACGACGGTGGGC
CAACATCCAGGTCCCAGTACTGAATGCCCCGTGGGAGAACGTTCTTGGGA
GGAAGAGGGTGGCGCTCAGGATTCCTCTCCCCAACACTCGAACTGGGTAC
GTGACGTTGCGTGGTGTCCCGGAACCGGAGTGCCTTGCAACGTAGTAGCC
AGCTGCTGTGAAGGAAGGGGAGTGGTGATCTGGACACAAAGGCAGGCTAA
CGGGCCGTGGTCGGCTACCGAAATGTACACTTTTCCGGCGCCCGTCTGGC
GAGTCTCTTGGTCTGTTACCGGACACGTTTTAGCTGTCTCTTCGGGGGAT
GATGACGTGTCTCTGTGGAAGCAAAATTTGGAAGGTGCATGGGAATGTAT
CTCAAAAGTGCACGACGGTGGGCCAACATCCAGGTCCCAGTACTGA
back to top