mRNA_H-paniculata_contig163.3607.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
|
Overview
Homology
BLAST of mRNA_H-paniculata_contig163.3607.1 vs. uniprot
Match: D7FLD9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLD9_ECTSI) HSP 1 Score: 427 bits (1097), Expect = 1.390e-143 Identity = 231/316 (73.10%), Postives = 264/316 (83.54%), Query Frame = 1
Query: 301 MATTPLATIETQHDDMIHDTQLDYYGKRLATASSDRTVRVFEIMGENHQPMPVEVIRGHEGAVWQVAWAHPKFGVLLASCSYDGTAIIHRESPPGTWTAVHKHDLHQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHATFIQDSKLGCNAVSWAPHVSVGSKEGGREYMRLVTGSCDHRVRFWRCPVGERSWEEEGGAQDSSPQHSNWVRDVAWCPGTGVPCNVVASCCEGRGVVIWTQRQANGPWSATEMYTFPAPVWRVSWSVTGHVLAVSSGDDDVSLWKQNLEGAWECISKV-HDGGPTSRSQY 1245
MATT L TI+T H IHD QLDYYGK+LATASSD + +FE++G++H ++ + GH+G VWQV WAHPKFGVLLASCSYD + IIHRE+PPGTW+ VHKH+LH XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX H TFIQDSKLGCN+VSWAP S+GS+EG + YMRLVTGSCD+RVRFWRC VGE W+E+G + DSSP+HS+WVRDVAW P TG+PCN+VASC E RGVVIWTQ QA+GPW+A EM TFPAPVWRVSWS+TG+VLAVSSGD DVSLWKQNLEGAWECIS V + GPT Y
Sbjct: 1 MATTALQTIDTHHSGNIHDAQLDYYGKKLATASSDCKINIFEVVGDSHHNQ-LDSLSGHDGPVWQVGWAHPKFGVLLASCSYDKSVIIHRETPPGTWSPVHKHELHTSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEWHTTFIQDSKLGCNSVSWAPFNSLGSREGEKVYMRLVTGSCDNRVRFWRCAVGETVWKEDGSSHDSSPRHSDWVRDVAWAPATGMPCNIVASCSEDRGVVIWTQSQASGPWAAAEMKTFPAPVWRVSWSITGNVLAVSSGDSDVSLWKQNLEGAWECISTVPEEAGPTPSPHY 315
BLAST of mRNA_H-paniculata_contig163.3607.1 vs. uniprot
Match: A0A836CBZ9_9STRA (WD40-repeat-containing domain protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CBZ9_9STRA) HSP 1 Score: 346 bits (887), Expect = 7.390e-112 Identity = 193/319 (60.50%), Postives = 230/319 (72.10%), Query Frame = 1
Query: 301 MATTPLATIETQHDDMIHDTQLDYYGKRLATASSDRTVRVFEIMGENHQPMPVEVIRGHEGAVWQVAWAHPKFGVLLASCSYDGTAIIHRESPPGTWTAVHKHDLHQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHATFIQDSKLGCNAVSWAPHVSVGSKEG--GREYMRLVTGSCDHRVRFWRCPV---------GERSWEEEGGAQDSSPQHSNWVRDVAWCPGTGVPCNVVASCCEGRGVVIWTQRQANGPWSATEMYTFPAPVWRVSWSVTGHVLAVSSGDDDVSLWKQNLEGAWECISKVHDGG 1224
M+ + L IETQH++MIHD QLDYY ++LATASSDRT+ +F+I GE V + GHEG VWQVAWAHP+FGVLLASCSYDG+ +IH ESPPG WT VH H LH XXXXXXXXXXXXXXXXXXXXXXXXXX + QD KLGCNAVSWAP+ S G K+ GR+ MRLVTGSCD+RVR W+CP G+ W +E S P H++WVRDVAW P TG+P N +ASC E + V IWTQ++ W+ T+M+ F APVWR+SWSVTG+VLAVS GDDDV+LWKQN+EG WE +S V +GG
Sbjct: 1 MSVSTLVNIETQHNEMIHDAQLDYYSRKLATASSDRTIEIFDINGEVTNRSAV--LTGHEGPVWQVAWAHPRFGVLLASCSYDGSVLIHTESPPGVWTTVHAHRLHXXXXXXXXXXXXXXXXXXXXXXXXXXXSILQHMDDDSWQVSTFQDGKLGCNAVSWAPYGSGGGKDDAMGRDVMRLVTGSCDNRVRVWKCPAPTAGEVLGQGQLVWTDE--LTHSEPAHTDWVRDVAWAPATGMPFNTIASCGEDKAVYIWTQQEGGTEWTLTKMHEFSAPVWRLSWSVTGNVLAVSHGDDDVTLWKQNIEGRWEMVSSVEEGG 315
BLAST of mRNA_H-paniculata_contig163.3607.1 vs. uniprot
Match: A0A7S2UZ04_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UZ04_9STRA) HSP 1 Score: 301 bits (771), Expect = 2.900e-94 Identity = 190/324 (58.64%), Postives = 228/324 (70.37%), Query Frame = 1
Query: 301 MATTPLATIETQHDDMIHDTQLDYYGKRLATASSDRTVRVFEIMGENHQPMPVEVIRGHEGAVWQVAWAHPKFGVLLASCSYDGTAIIHRESPPGTWTAVHKHDLHQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHATFIQDSKLGCNAVSWAPHVSVGSK-EGGREYMRLVTGSCDHRVRFWRCPVGERSWEEEGGAQDSSPQHSNWVRDVAWCPGTGVPCNVVASCCEGRGVVIWTQRQANGP-----------------WSATEMYTFPAPVWRVSWSVTGHVLAVSSGDDDVSLWKQNLEGAWECISKVHD 1218
MA TI+TQH+DMIHD Q DYY K++AT SSDRT++++++ G+ + V + GH+G VWQVAWAHPKFGVLLASCSYDG IIHRESP WT +H H H+ XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX QDS LGCNA+SWAP+ ++GS+ E G MR+VTGSCD++VRFWR ER WEEE D HS+WVRDVAW P +G+PCN+VAS E V IW Q + +G W ++ F APVWRVSWSVTG+VLAVSSGD V+LWKQ+L+G W +S V +
Sbjct: 1 MAADQPVTIDTQHEDMIHDAQFDYYAKKVATCSSDRTIQIYDVTGDVYNKSAV--LTGHDGPVWQVAWAHPKFGVLLASCSYDGQVIIHRESPQSCWTQIHVHRFHESXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAHFQDSPLGCNAISWAPYNAIGSQNERGAVEMRVVTGSCDNKVRFWRST--ERGWEEEAKQADV---HSDWVRDVAWAPSSGMPCNLVASGSEDGQVHIWQQTETSGAPTSGGGAASSPASGQAVWQPHLVHNFGAPVWRVSWSVTGNVLAVSSGDHMVTLWKQSLDGTWFQVSSVKE 317
BLAST of mRNA_H-paniculata_contig163.3607.1 vs. uniprot
Match: K3XB55_GLOUD (Uncharacterized protein n=2 Tax=Pythiaceae TaxID=4782 RepID=K3XB55_GLOUD) HSP 1 Score: 298 bits (764), Expect = 1.330e-93 Identity = 173/308 (56.17%), Postives = 213/308 (69.16%), Query Frame = 1
Query: 307 TTPLATIETQHDDMIHDTQLDYYGKRLATASSDRTVRVFEIMGE--NHQPMPVEVIRGHEGAVWQVAWAHPKFGVLLASCSYDGTAIIHRESPPGTWTAVHKHDLHQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHATFIQDSKLGCNAVSWAPHVSVGSKEGGREYMRLVTGSCDHRVRFWRCPVGERSWEEEGGAQDSSPQHSNWVRDVAWCPGTGVPCNVVASCCEGRGVVIWTQRQANGPWSATEMYTFPAPVWRVSWSVTGHVLAVSSGDDDVSLWKQNLEGAWECISKVHDGG 1224
T P+ +I+TQH+DMIHD QLDYYGKRLAT SSDRTV+V+++ GE N++ +++ GHEG VWQVAWAHPKFG LLASCSYDG II+RE W + H XXXXXXXXXXXXXXXXXXXXXXXXX + F +DS LGCNAVSWAP ++GSK R+VT SCD ++ W G+ W +E + S+P HS+WVRD AW P TG+P N++ASC E + V IW+Q + NGPW ++TF APVWRVSWSVTG+VLAVSSGD V+LWK+ L+ W IS V + G
Sbjct: 2 TAPILSIDTQHEDMIHDAQLDYYGKRLATCSSDRTVKVYDVTGEVQNNE----QLLTGHEGPVWQVAWAHPKFGALLASCSYDGKVIIYREQSLNQWAQTYVHAFXXXXXXXXXXXXXXXXXXXXXXXXXXXVSVISYSTEGWSVSHF-KDSSLGCNAVSWAPFNALGSKGETGPIRRIVTASCDKTIKIWSLAEGQTEWTKEDIS--SAPAHSDWVRDAAWAPSTGMPVNLIASCSEDKHVYIWSQTEENGPWKRELLHTFEAPVWRVSWSVTGNVLAVSSGDHKVTLWKETLDKKWIQISSVDEAG 302
BLAST of mRNA_H-paniculata_contig163.3607.1 vs. uniprot
Match: D0NKZ1_PHYIT (Protein transport protein SEC13 n=16 Tax=Peronosporaceae TaxID=4777 RepID=D0NKZ1_PHYIT) HSP 1 Score: 296 bits (758), Expect = 1.090e-92 Identity = 169/308 (54.87%), Postives = 212/308 (68.83%), Query Frame = 1
Query: 307 TTPLATIETQHDDMIHDTQLDYYGKRLATASSDRTVRVFEIMGE--NHQPMPVEVIRGHEGAVWQVAWAHPKFGVLLASCSYDGTAIIHRESPPGTWTAVHKHDLHQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHATFIQDSKLGCNAVSWAPHVSVGSKEGGREYMRLVTGSCDHRVRFWRCPVGERSWEEEGGAQDSSPQHSNWVRDVAWCPGTGVPCNVVASCCEGRGVVIWTQRQANGPWSATEMYTFPAPVWRVSWSVTGHVLAVSSGDDDVSLWKQNLEGAWECISKVHDGG 1224
+ P+ +I+TQH+DMIHD QLDYYGKRLAT SSDRT++V+++ G+ N++ +++ GHEG VWQV+WAHPKFGVLLA+CSYDG II+RE WT + H H XXXXXXXXXXXXXXXXXXXXXXXX + F +DS LGCNAVSWAP SVGS+ R++T SCD ++ W P GE W ++ S P HS+WVRDVAW P TG+P N++ASC E + V IW+Q + W ++TF APVWRVSWSVTG+VLAVSSGD V+LWK+ L+ W IS V + G
Sbjct: 2 SAPILSIDTQHEDMIHDAQLDYYGKRLATCSSDRTIKVYDVAGDVQNNE----QILTGHEGPVWQVSWAHPKFGVLLAACSYDGKVIIYREQSLNQWTQAYVHAFHDSXXXXXXXXXXXXXXXXXXXXXXXXVSVLSYSPEGWSVSHF-KDSALGCNAVSWAPFNSVGSQGPSGPIRRVMTASCDKTIKIWSLPEGETEWTKQ--ELSSVPAHSDWVRDVAWAPSTGLPVNLIASCSEDKHVYIWSQTAEDSSWKRELLHTFDAPVWRVSWSVTGNVLAVSSGDHKVTLWKETLDKKWIQISSVDEAG 302
BLAST of mRNA_H-paniculata_contig163.3607.1 vs. uniprot
Match: H3GAW1_PHYRM (Uncharacterized protein n=7 Tax=Peronosporaceae TaxID=4777 RepID=H3GAW1_PHYRM) HSP 1 Score: 293 bits (751), Expect = 1.200e-91 Identity = 170/308 (55.19%), Postives = 212/308 (68.83%), Query Frame = 1
Query: 307 TTPLATIETQHDDMIHDTQLDYYGKRLATASSDRTVRVFEIMGE--NHQPMPVEVIRGHEGAVWQVAWAHPKFGVLLASCSYDGTAIIHRESPPGTWTAVHKHDLHQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHATFIQDSKLGCNAVSWAPHVSVGSKEGGREYMRLVTGSCDHRVRFWRCPVGERSWEEEGGAQDSSPQHSNWVRDVAWCPGTGVPCNVVASCCEGRGVVIWTQRQANGPWSATEMYTFPAPVWRVSWSVTGHVLAVSSGDDDVSLWKQNLEGAWECISKVHDGG 1224
+ P+ +I+TQH+DMIHD QLDYYGKRLAT SSDRT++V+++ G+ N++ +++ GHEG VWQVAWAHPKFGVLLA+CSYDG II+RE WT + H H XXXXXXXXXXXXXXXXXXXXXXXXX + F +DS LGCNAVSWAP SVGS+ R+VT SCD ++ W GE W ++ S+P H +WVRDVAW P TG+P N++ASC E + V IW+Q + W ++TF APVWRVSWSVTG+VLAVSSGD V+LWK+ L+ W IS V + G
Sbjct: 2 SAPILSIDTQHEDMIHDAQLDYYGKRLATCSSDRTIKVYDVTGDVQNNE----QILTGHEGPVWQVAWAHPKFGVLLAACSYDGKVIIYREQSLNQWTQAYMHGFHXXXXXXXXXXXXXXXXXXXXXXXXXXVSVLSYSPEGWSVSHF-KDSALGCNAVSWAPFNSVGSQGPTGPIRRVVTASCDKTIKIWSLQEGETEWTKQ--ELSSAPAHGDWVRDVAWAPSTGLPVNLIASCSEDKHVYIWSQTAEDTVWKRELLHTFDAPVWRVSWSVTGNVLAVSSGDHKVTLWKETLDKKWIQISSVDEAG 302
BLAST of mRNA_H-paniculata_contig163.3607.1 vs. uniprot
Match: A0A3M6VUN6_9STRA (Uncharacterized protein n=3 Tax=Peronosporaceae TaxID=4777 RepID=A0A3M6VUN6_9STRA) HSP 1 Score: 294 bits (753), Expect = 8.100e-89 Identity = 169/308 (54.87%), Postives = 214/308 (69.48%), Query Frame = 1
Query: 307 TTPLATIETQHDDMIHDTQLDYYGKRLATASSDRTVRVFEIMGE--NHQPMPVEVIRGHEGAVWQVAWAHPKFGVLLASCSYDGTAIIHRESPPGTWTAVHKHDLHQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHATFIQDSKLGCNAVSWAPHVSVGSKEGGREYMRLVTGSCDHRVRFWRCPVGERSWEEEGGAQDSSPQHSNWVRDVAWCPGTGVPCNVVASCCEGRGVVIWTQRQANGPWSATEMYTFPAPVWRVSWSVTGHVLAVSSGDDDVSLWKQNLEGAWECISKVHDGG 1224
+ P+ +I+TQH+DMIHD QLDYYGKRLAT SSDRT++V+++ G+ N++ +++ GHEG VWQV+WAHPKFGVLLA+CSYDG II+RE WT + H + XXXXXXXXXXXXXXXXXXXXXXXXX + F +DS LGCNAVSWAP SVGS+ R+VT SCD ++ W GE+ W ++ S+P HS+WVRDVAW P TG+P N++ASC E + V IW+Q + W ++TF APVWRVSWSVTG+VLAVSSGD V+LWK+ L+ W IS V + G
Sbjct: 2 SAPILSIDTQHEDMIHDAQLDYYGKRLATCSSDRTIKVYDVTGDVQNNE----QILTGHEGPVWQVSWAHPKFGVLLAACSYDGKVIIYREQSLNQWTQAYVHAIXXXXXXXXXXXXXXXXXXXXXXXXXXXVSVLSYSPEGWSVSHF-KDSALGCNAVSWAPFNSVGSQSPAGPIRRVVTASCDKTIKIWSLTEGEKEWTKQ--ELSSAPAHSDWVRDVAWAPSTGLPVNLIASCSEDKHVYIWSQSAEDSAWKRELLHTFDAPVWRVSWSVTGNVLAVSSGDHKVTLWKETLDKKWIQISSVDEAG 302
BLAST of mRNA_H-paniculata_contig163.3607.1 vs. uniprot
Match: A0A2D4BZT8_PYTIN (Protein transport protein SEC13 n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BZT8_PYTIN) HSP 1 Score: 296 bits (757), Expect = 1.750e-87 Identity = 174/317 (54.89%), Postives = 214/317 (67.51%), Query Frame = 1
Query: 250 ENKQRALR*ALPASRRTMATTPLATIETQHDDMIHDTQLDYYGKRLATASSDRTVRVFEIMGE--NHQPMPVEVIRGHEGAVWQVAWAHPKFGVLLASCSYDGTAIIHRESPPGTWTAVHKHDLHQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHATFIQDSKLGCNAVSWAPHVSVGSKEGGREYMRLVTGSCDHRVRFWRCPVGERSWEEEGGAQDSSPQHSNWVRDVAWCPGTGVPCNVVASCCEGRGVVIWTQRQANGPWSATEMYTFPAPVWRVSWSVTGHVLAVSSGDDDVSLWKQNLEGAW 1194
EN + LP TM T P+ +I+TQH+DMIHD QLDYYGKRLAT SSDRT++V+++ G+ N++ +++ GHEG VWQV+WAHPKFGVLLASCSYDG II +E WT + H XXXXXXXXXXXXXXXXXXXXXXXXXX + F +DS LGC AVSWAP S+GSK R+VT SCD ++ W P G W ++ S+P H +WVRD AW PGTG+P N++ASC E + V IWTQ + NGPW ++ F APVWRVSWSVTG+VLAVSSGD V+LWK+ L+ W
Sbjct: 118 ENLNHCIACPLPTPATTM-TAPILSIDTQHEDMIHDAQLDYYGKRLATCSSDRTIKVYDVTGDVQNNE----QILSGHEGPVWQVSWAHPKFGVLLASCSYDGKVIIFKEQSLNQWTQAYVHAFXXXXXXXXXXXXXXXXXXXXXXXXXXXXSVLSYTAEGWVVSHF-KDSSLGCXAVSWAPFNSLGSKNEAGPIKRVVTASCDKTIKIWSLPEGHTEWTKQ--EISSAPAHVDWVRDAAWAPGTGMPVNIIASCSEDKHVYIWTQSEENGPWKRELLHVFDAPVWRVSWSVTGNVLAVSSGDHKVTLWKETLDKKW 426
BLAST of mRNA_H-paniculata_contig163.3607.1 vs. uniprot
Match: A0A7S2JUM7_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2JUM7_9STRA) HSP 1 Score: 279 bits (714), Expect = 8.540e-86 Identity = 162/313 (51.76%), Postives = 215/313 (68.69%), Query Frame = 1
Query: 301 MATTPL-ATIETQHDDMIHDTQLDYYGKRLATASSDRTVRVFEIMGENHQPMPVEVIRGHEGAVWQVAWAHPKFGVLLASCSYDGTAIIHRE-SPPGTWTAVHKHDLHQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHATFIQDSKLGCNAVSWAPHVSVGSKEGGREYMRLVTGSCDHRVRFWRCPVGERSWEEEG-GAQDSSPQHSNWVRDVAWCPGTGVPCNVVASCCEGRGVVIWTQRQANGP-WSATEMYTFPAPVWRVSWSVTGHVLAVSSGDDDVSLWKQNLEGAWECISKVHDGGP 1227
+ATTP +I+TQHDDM+HD QLDYYG +LAT SSDRTV+V+ + ++ + + GHEG V+++AWAHPKFG +LAS S+DG+ ++HRE P G+WT VH H +H XXXXXXXXXXXXXXXXXXXXXXXX ATF QD+ LG N+VS+AP + + + ++ MRLV G CD++VRFW+ ++WE++ + + H++WVRDVAW P T N VASC E + V+IWTQ + + W ++TF APVWRVSWSVTG +LAVSSGD DV++WKQ L+G W ++ V D P
Sbjct: 19 VATTPAPVSIDTQHDDMVHDAQLDYYGVKLATCSSDRTVKVYSV-AKDQEVSHTATLTGHEGPVYEIAWAHPKFGSILASSSFDGSVLLHREVQPMGSWTLVHAHRMHXXXXXXXXXXXXXXXXXXXXXXXXXKVSVITHREDDSWDATFFQDNMLGVNSVSFAPCSFMSASDDAKDGMRLVVGGCDNKVRFWKLNAETKTWEQDDFDSSKADVTHTDWVRDVAWAP-TVSSFNTVASCSEDKTVIIWTQSEDDRTEWKPVLLHTFDAPVWRVSWSVTGTILAVSSGDSDVTMWKQELDGKWSQVASVEDSQP 329
BLAST of mRNA_H-paniculata_contig163.3607.1 vs. uniprot
Match: A0A7R9ZAI8_9STRA (Hypothetical protein n=3 Tax=Odontellaceae TaxID=2749909 RepID=A0A7R9ZAI8_9STRA) HSP 1 Score: 275 bits (702), Expect = 1.100e-83 Identity = 148/307 (48.21%), Postives = 192/307 (62.54%), Query Frame = 1
Query: 325 IETQHDDMIHDTQLDYYGKRLATASSDRTVRVFEIMGENHQPMPVEVIRGHEGAVWQVAWAHPKFGVLLASCSYDGTAIIHRESPPGTWTAVHK-HDLHQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHATFIQDSKLGCNAVSWAPHV---SVGSKEG----GREYMRLVTGSCDHRVRFWRCPVGERSWEEEGGAQDSSPQHSNWVRDVAWCPGTGVPCNVVASCCEGRGVVIWTQRQANGP-WSATEMYTFPAPVWRVSWSVTGHVLAVSSGDDDVSLWKQNLEGAWECISKVHD 1218
++TQHDDM+HD QLDYYG +LAT+SSDRT++++++ G + ++GHEG VW+V+W+HPKFG++LASCS+DG+ +IHRES P WT +H LH XXXXXXXXXXXXXX +I+D+ LG NAVSWAP+ G+ EG +VTG CD+R+RFW WEEE GA P H++WVRDVAW P +VVASC E + V++WT+ G W ++ F APVWR+SWSVTG VLAVSSGD V+LWK L+G W +S V D
Sbjct: 39 VDTQHDDMVHDAQLDYYGCKLATSSSDRTIKIYDVSGNSFAH--TATLQGHEGPVWEVSWSHPKFGIVLASCSFDGSVLIHRESRPREWTLLHAARGLHDSSVNGVAFAPHXXXXXXXXXXXXXXVSVLTHNEDDTWGVEYIRDNSLGVNAVSWAPYAPFNEAGAGEGEGVAAAPQPTVVTGGCDNRIRFWTRSAQNGQWEEEPGALGPGPAHTDWVRDVAWAPAIIPGVDVVASCSEDKTVIVWTRTGGRGSSWEPKLLHAFEAPVWRLSWSVTGSVLAVSSGDSSVTLWKAGLDGVWRRVSHVED 343 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig163.3607.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig163.3607.1 >prot_H-paniculata_contig163.3607.1 ID=prot_H-paniculata_contig163.3607.1|Name=mRNA_H-paniculata_contig163.3607.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=316bp MATTPLATIETQHDDMIHDTQLDYYGKRLATASSDRTVRVFEIMGENHQPback to top mRNA from alignment at H-paniculata_contig163:1623..7997- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig163.3607.1 ID=mRNA_H-paniculata_contig163.3607.1|Name=mRNA_H-paniculata_contig163.3607.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=6375bp|location=Sequence derived from alignment at H-paniculata_contig163:1623..7997- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig163:1623..7997- >mRNA_H-paniculata_contig163.3607.1 ID=mRNA_H-paniculata_contig163.3607.1|Name=mRNA_H-paniculata_contig163.3607.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1896bp|location=Sequence derived from alignment at H-paniculata_contig163:1623..7997- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |