prot_H-paniculata_contig16251.3595.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig16251.3595.1
Unique Nameprot_H-paniculata_contig16251.3595.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length105
Homology
BLAST of mRNA_H-paniculata_contig16251.3595.1 vs. uniprot
Match: A0A6H5K9K6_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K9K6_9PHAE)

HSP 1 Score: 85.9 bits (211), Expect = 1.300e-17
Identity = 45/99 (45.45%), Postives = 63/99 (63.64%), Query Frame = 0
Query:    4 EMVNEVLFLRQVEAFIMPALEHYPAIMKEDNQGAKKIAHNKYSSRRARHIDVKHHIVRDSVEAGKFGVVYVGTGEQHVDVLKKALERSSVQKHVNALMN 102
            E V E LF+R V +FI P        + EDNQGA  +  N +SS R++HIDV+ H +R+  ++G+  V Y+ T EQH D+L KAL R+ ++ H NALMN
Sbjct:  270 EGVKEALFVRAVLSFIAPETSGAKIKVLEDNQGAISLVQNPFSSARSKHIDVRFHFIRELFKSGRISVEYIPTDEQHADLLTKALGRTKLEDHRNALMN 368          
BLAST of mRNA_H-paniculata_contig16251.3595.1 vs. uniprot
Match: A0A6H5JKS3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JKS3_9PHAE)

HSP 1 Score: 85.9 bits (211), Expect = 2.410e-17
Identity = 45/99 (45.45%), Postives = 63/99 (63.64%), Query Frame = 0
Query:    4 EMVNEVLFLRQVEAFIMPALEHYPAIMKEDNQGAKKIAHNKYSSRRARHIDVKHHIVRDSVEAGKFGVVYVGTGEQHVDVLKKALERSSVQKHVNALMN 102
            E V E LF+R V +FI P        + EDNQGA  +  N +SS R++HIDV+ H +R+  ++G+  V Y+ T EQH D+L KAL R+ ++ H NALMN
Sbjct: 1145 EGVKEALFVRAVLSFIAPETSGAKIKVLEDNQGAISLVQNPFSSARSKHIDVRFHFIRELFKSGRISVEYIPTDEQHADLLTKALGRTKLEDHRNALMN 1243          
BLAST of mRNA_H-paniculata_contig16251.3595.1 vs. uniprot
Match: A0A6H5L175_9PHAE (Uncharacterized protein n=9 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L175_9PHAE)

HSP 1 Score: 85.9 bits (211), Expect = 2.440e-17
Identity = 45/99 (45.45%), Postives = 63/99 (63.64%), Query Frame = 0
Query:    4 EMVNEVLFLRQVEAFIMPALEHYPAIMKEDNQGAKKIAHNKYSSRRARHIDVKHHIVRDSVEAGKFGVVYVGTGEQHVDVLKKALERSSVQKHVNALMN 102
            E V E LF+R V +FI P        + EDNQGA  +  N +SS R++HIDV+ H +R+  ++G+  V Y+ T EQH D+L KAL R+ ++ H NALMN
Sbjct: 1698 EGVKEALFVRAVLSFIAPETSGAKIKVLEDNQGAISLVQNPFSSARSKHIDVRFHFIRELFKSGRISVEYIPTDEQHADLLTKALGRTKLEDHRNALMN 1796          
BLAST of mRNA_H-paniculata_contig16251.3595.1 vs. uniprot
Match: A0A6H5KU04_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KU04_9PHAE)

HSP 1 Score: 75.5 bits (184), Expect = 1.650e-15
Identity = 35/71 (49.30%), Postives = 50/71 (70.42%), Query Frame = 0
Query:   32 EDNQGAKKIAHNKYSSRRARHIDVKHHIVRDSVEAGKFGVVYVGTGEQHVDVLKKALERSSVQKHVNALMN 102
            EDNQGA  +  N +SS R++HIDV+ H +R+  ++G+  V Y+ T EQH D+L KAL R+ ++ H NALMN
Sbjct:   38 EDNQGAISLVQNPFSSARSKHIDVRFHFIRELFKSGRISVEYIPTDEQHADLLTKALGRTKLEDHRNALMN 108          
BLAST of mRNA_H-paniculata_contig16251.3595.1 vs. uniprot
Match: A0A6H5JNH6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNH6_9PHAE)

HSP 1 Score: 74.7 bits (182), Expect = 4.040e-15
Identity = 40/99 (40.40%), Postives = 62/99 (62.63%), Query Frame = 0
Query:    4 EMVNEVLFLRQVEAFIMPALEHYPAIMKEDNQGAKKIAHNKYSSRRARHIDVKHHIVRDSVEAGKFGVVYVGTGEQHVDVLKKALERSSVQKHVNALMN 102
            +++ EVLFLRQV  F++P        + EDNQGA +IAHN  ++  ++HIDV+HH +R+ VE  +  + +V +  QH D L KA+ + S   H + +MN
Sbjct:   19 DVLKEVLFLRQVWRFMLPDAGMPCIPVFEDNQGAIQIAHNPITNSNSKHIDVRHHFIRELVERKEISITHVTSEFQHADFLTKAISKESFALHRDFVMN 117          
BLAST of mRNA_H-paniculata_contig16251.3595.1 vs. uniprot
Match: A0A6H5JEF2_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=7 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JEF2_9PHAE)

HSP 1 Score: 76.6 bits (187), Expect = 3.660e-14
Identity = 41/99 (41.41%), Postives = 63/99 (63.64%), Query Frame = 0
Query:    4 EMVNEVLFLRQVEAFIMPALEHYPAIMKEDNQGAKKIAHNKYSSRRARHIDVKHHIVRDSVEAGKFGVVYVGTGEQHVDVLKKALERSSVQKHVNALMN 102
            +++ EVLFLRQV  F++P        + EDNQGA +IAHN  ++  ++HIDV+HH +R+ VE  +  + +V T  QH D L KA+ + S+  H + +MN
Sbjct:  338 DVLKEVLFLRQVWRFMLPDAGMPCIPVFEDNQGAIQIAHNPITNSNSKHIDVRHHFIRELVERKEISITHVPTHFQHADFLTKAISKESLGLHRDFVMN 436          
BLAST of mRNA_H-paniculata_contig16251.3595.1 vs. uniprot
Match: A0A6H5KDZ6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDZ6_9PHAE)

HSP 1 Score: 72.4 bits (176), Expect = 4.450e-14
Identity = 39/85 (45.88%), Postives = 53/85 (62.35%), Query Frame = 0
Query:    6 VNEVLFLRQVEAFIMPALEHYPAIMKEDNQGAKKIAHNKYSSRRARHIDVKHHIVRDSVEAGKFGVVYVGTGEQHVDVLKKALER 90
            V E LF+R V +FI P        + EDN+GA  +  N +SS R++HIDV+ H +R+  ++GK    YV TGEQH D+L KAL R
Sbjct:   46 VKEALFVRGVLSFIAPETSGAKIKVLEDNKGALALIENPFSSARSKHIDVRFHFIRELFKSGKITAEYVPTGEQHADMLTKALGR 130          
BLAST of mRNA_H-paniculata_contig16251.3595.1 vs. uniprot
Match: A0A6H5L5Q2_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5Q2_9PHAE)

HSP 1 Score: 75.1 bits (183), Expect = 9.410e-14
Identity = 39/96 (40.62%), Postives = 60/96 (62.50%), Query Frame = 0
Query:    7 NEVLFLRQVEAFIMPALEHYPAIMKEDNQGAKKIAHNKYSSRRARHIDVKHHIVRDSVEAGKFGVVYVGTGEQHVDVLKKALERSSVQKHVNALMN 102
             E +FLR + +FI P  +    ++KEDN GA  +A+N  ++  ++HIDV+HH +R+ V+ G+F VVYV +  QH D L K L + +   H N +MN
Sbjct:  249 KEAIFLRYLWSFIFPDGDVGCTVIKEDNVGALHLANNPATTPNSKHIDVRHHFIRERVDRGEFKVVYVPSHLQHADFLTKPLPKEAFSVHRNFVMN 344          
BLAST of mRNA_H-paniculata_contig16251.3595.1 vs. uniprot
Match: A0A6H5KGM1_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KGM1_9PHAE)

HSP 1 Score: 75.5 bits (184), Expect = 1.030e-13
Identity = 40/99 (40.40%), Postives = 61/99 (61.62%), Query Frame = 0
Query:    4 EMVNEVLFLRQVEAFIMPALEHYPAIMKEDNQGAKKIAHNKYSSRRARHIDVKHHIVRDSVEAGKFGVVYVGTGEQHVDVLKKALERSSVQKHVNALMN 102
            +++ EVLFL+QV  F++P        + EDNQGA +IAHN  ++  ++HIDV+HH +R+ VE     + +V T  QH D L KA+ + S   H + +MN
Sbjct:  559 DVLKEVLFLKQVWRFMLPDASMPCISVFEDNQGAIQIAHNPITNSNSKHIDVRHHFIRELVERKDISITHVPTHFQHADFLTKAISKESFALHRDFVMN 657          
BLAST of mRNA_H-paniculata_contig16251.3595.1 vs. uniprot
Match: A0A6H5KD11_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KD11_9PHAE)

HSP 1 Score: 75.5 bits (184), Expect = 1.060e-13
Identity = 42/99 (42.42%), Postives = 61/99 (61.62%), Query Frame = 0
Query:    4 EMVNEVLFLRQVEAFIMPALEHYPAIMKEDNQGAKKIAHNKYSSRRARHIDVKHHIVRDSVEAGKFGVVYVGTGEQHVDVLKKALERSSVQKHVNALMN 102
            +++ EVLFLRQV  F++P        + EDNQGA +IAHN  ++  ++HIDV+HH VR+ VE     + +V T  QH D L KA+ + S   H + +MN
Sbjct:  463 DVLKEVLFLRQVWRFMLPDAGMPCIPVFEDNQGAIQIAHNPITNSNSKHIDVRHHFVRELVERKGISITHVPTQLQHADFLTKAISKESFALHRDFVMN 561          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig16251.3595.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5K9K6_9PHAE1.300e-1745.45Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5JKS3_9PHAE2.410e-1745.45Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L175_9PHAE2.440e-1745.45Uncharacterized protein n=9 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KU04_9PHAE1.650e-1549.30Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JNH6_9PHAE4.040e-1540.40Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JEF2_9PHAE3.660e-1441.41Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5KDZ6_9PHAE4.450e-1445.88Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L5Q2_9PHAE9.410e-1440.63Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5KGM1_9PHAE1.030e-1340.40Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5KD11_9PHAE1.060e-1342.42Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig16251contigH-paniculata_contig16251:3368..3682 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig16251.3595.1mRNA_H-paniculata_contig16251.3595.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig16251 3329..4322 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig16251.3595.1 ID=prot_H-paniculata_contig16251.3595.1|Name=mRNA_H-paniculata_contig16251.3595.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=105bp
MALEMVNEVLFLRQVEAFIMPALEHYPAIMKEDNQGAKKIAHNKYSSRRA
RHIDVKHHIVRDSVEAGKFGVVYVGTGEQHVDVLKKALERSSVQKHVNAL
MNAV*
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