mRNA_H-paniculata_contig16224.3584.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig16224.3584.1
Unique NamemRNA_H-paniculata_contig16224.3584.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
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BLAST of mRNA_H-paniculata_contig16224.3584.1 vs. uniprot
Match: D7FYD3_ECTSI (UBC core domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FYD3_ECTSI)

HSP 1 Score: 301 bits (770), Expect = 3.840e-97
Identity = 155/209 (74.16%), Postives = 169/209 (80.86%), Query Frame = 3 
Query:  114 MAGVGLIRLRKELKMLADEPPPGVCCWPAGSGDCLTHLEAQIQGPEDTPYERGTFLLDIQIPDRYPFEPPKVRFVTPIYHPNIDSGGRICLDSLKMRPAGSWTPSMNVPTLLTTIRLLMAHPNGEDGLMPDITELFLKNPSRFADIARAHVEKHARQEL---ARGAEAA---------TTAAPEGRPKAKDGHLTRSGNTVTATSRSEG 704
            MAGVGL+RL KELKML DEPPPGVC WP    DC+THL+AQIQGPEDTPYERGTFLL+++IPDRYPFEPPKVRFVTPIYHPNIDSGGRICLD+LKMRPAGSW PSMNVPTLLTTIRLLMAHPNG+DGLMPDITELFLKNPSRFAD+ARAHVE+HARQ+    A G  AA         T AAP G  + K G    S  ++  TSR  G
Sbjct:    1 MAGVGLVRLGKELKMLTDEPPPGVCAWPVD--DCITHLQAQIQGPEDTPYERGTFLLELKIPDRYPFEPPKVRFVTPIYHPNIDSGGRICLDTLKMRPAGSWAPSMNVPTLLTTIRLLMAHPNGDDGLMPDITELFLKNPSRFADVARAHVEEHARQDKPSPATGKAAAPTERQAAEDTAAAPRGGEEGKAGKT--SVPSIATTSRDSG 205
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BLAST of mRNA_H-paniculata_contig16224.3584.1 vs. uniprot
Match: A0A835Z9Y5_9STRA (UBC37-like protein, E2 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z9Y5_9STRA)

HSP 1 Score: 223 bits (569), Expect = 5.820e-70
Identity = 100/132 (75.76%), Postives = 115/132 (87.12%), Query Frame = 3 
Query:  114 MAGVGLIRLRKELKMLADEPPPGVCCWPAGSGDCLTHLEAQIQGPEDTPYERGTFLLDIQIPDRYPFEPPKVRFVTPIYHPNIDSGGRICLDSLKMRPAGSWTPSMNVPTLLTTIRLLMAHPNGEDGLMPDI 509
            M+     RLRKEL +LA +PPPG+C WP G  D LTHL+AQ++GP+DTPY RG FLLDI +PD YPFEPPKVRFVTPIYHPNIDSGGRICLD+LKMRPAGSWTPS+N+PTLLTTIR L+AHPNG+DGLMP+I
Sbjct:    1 MSATAAARLRKELSLLATDPPPGICAWPVG--DSLTHLQAQVEGPDDTPYARGIFLLDILVPDSYPFEPPKVRFVTPIYHPNIDSGGRICLDTLKMRPAGSWTPSINIPTLLTTIRTLIAHPNGDDGLMPEI 130
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BLAST of mRNA_H-paniculata_contig16224.3584.1 vs. uniprot
Match: A0A7S2S0X2_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2S0X2_9STRA)

HSP 1 Score: 214 bits (546), Expect = 2.260e-64
Identity = 105/162 (64.81%), Postives = 127/162 (78.40%), Query Frame = 3 
Query:  135 RLRKELKMLADEPPPGVCCWPAGSGDCLTHLEAQIQGPEDTPYERGTFLLDIQIPDRYPFEPPKVRFVTPIYHPNIDSGGRICLDSLKMRPAGSWTPSMNVPTLLTTIRLLMAHPNGEDGLMPDITELFLKNPSRFADIARAHVEKHARQELARGAEAATTA 620
            R+ KEL +LA +PPPGV  WPA   D L  L AQIQGP  TPYERG+F L++ IP+RYPFEPPKVRF+TPIYHPNID GGRICLD+LKM+P GSW+PS+N+ TLLT+IRLLMAHPN +DGLMP+I+EL+ KNP  F   A AH  +HA      GA+A+T+A
Sbjct:    7 RILKELAVLAHDPPPGVSVWPAE--DVLDQLHAQIQGPPATPYERGSFSLELSIPERYPFEPPKVRFLTPIYHPNIDDGGRICLDTLKMQPQGSWSPSVNISTLLTSIRLLMAHPNPDDGLMPEISELYQKNPDAFERNATAHTARHAT-----GADASTSA 161
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BLAST of mRNA_H-paniculata_contig16224.3584.1 vs. uniprot
Match: A0A485LQ56_9STRA (Aste57867_24328 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LQ56_9STRA)

HSP 1 Score: 207 bits (528), Expect = 1.620e-62
Identity = 99/148 (66.89%), Postives = 118/148 (79.73%), Query Frame = 3 
Query:  135 RLRKELKMLADEPPPGVCCWPAGSGDCLTHLEAQIQGPEDTPYERGTFLLDIQIPDRYPFEPPKVRFVTPIYHPNIDSGGRICLDSLKMRPAGSWTPSMNVPTLLTTIRLLMAHPNGEDGLMPDITELFLKNPSRFADIARAHVEKHA 578
            R+RKEL+ML ++PP GVC W     D L  LEAQIQGPE TPYE+G FLL I IP+RYPFEPPKV+FVTPI+HPNID+ GRICLD+LKM+P GSW PS+N+PTLLTTIRLLMA PN +DGLMP+IT+LF +N + F   A A   +HA
Sbjct:    7 RMRKELEMLENDPPHGVCAW--SKDDKLDELEAQIQGPEGTPYEKGVFLLSITIPERYPFEPPKVQFVTPIFHPNIDNAGRICLDTLKMQPKGSWMPSVNLPTLLTTIRLLMAEPNPDDGLMPEITDLFKQNHALFVSKATALTAQHA 152
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BLAST of mRNA_H-paniculata_contig16224.3584.1 vs. uniprot
Match: A0A6G0WGU0_9STRA (UBC core domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WGU0_9STRA)

HSP 1 Score: 208 bits (529), Expect = 2.360e-62
Identity = 99/158 (62.66%), Postives = 121/158 (76.58%), Query Frame = 3 
Query:  135 RLRKELKMLADEPPPGVCCWPAGSGDCLTHLEAQIQGPEDTPYERGTFLLDIQIPDRYPFEPPKVRFVTPIYHPNIDSGGRICLDSLKMRPAGSWTPSMNVPTLLTTIRLLMAHPNGEDGLMPDITELFLKNPSRFADIARAHVEKHARQELARGAEA 608
            R+R+E++ML ++PP G+C WP   GD L  LEAQIQGPE TPYE+G FLL I IP+RYPFEPPKV FVTPIYHPNID+ GRICLD+LKM+P GSW PS+N+ TLLTTIRLLMA PN +DGLMP+IT+L+ +N   F   A A   +HA+    R  +A
Sbjct:    7 RMRREIEMLENDPPHGICAWP--KGDKLDELEAQIQGPEGTPYEKGVFLLQITIPERYPFEPPKVHFVTPIYHPNIDNAGRICLDTLKMQPKGSWMPSVNLSTLLTTIRLLMAEPNPDDGLMPEITDLYKQNHDLFVSRATAMTAQHAQTNAMRAPQA 162
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BLAST of mRNA_H-paniculata_contig16224.3584.1 vs. uniprot
Match: A0A1V9Z8S0_9STRA (Ubiquitin-conjugating enzyme E2T-like n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9Z8S0_9STRA)

HSP 1 Score: 204 bits (520), Expect = 2.420e-61
Identity = 95/152 (62.50%), Postives = 119/152 (78.29%), Query Frame = 3 
Query:  135 RLRKELKMLADEPPPGVCCWPAGSGDCLTHLEAQIQGPEDTPYERGTFLLDIQIPDRYPFEPPKVRFVTPIYHPNIDSGGRICLDSLKMRPAGSWTPSMNVPTLLTTIRLLMAHPNGEDGLMPDITELFLKNPSRFADIARAHVEKHARQEL 590
            R+RKEL+ML  +PP G+C W     D L  L+AQIQGPE TPYE G FLL+I+IP+RYPFEPPKV F+TPI+HPNID+GGRICLD+LKM+P GSW PS+N+ TLLTTIRLLMA PN +DGLMP+IT+LF +N + F   A+    +HA+ + 
Sbjct:    7 RMRKELEMLESDPPHGICAWSVD--DKLDDLQAQIQGPEGTPYENGVFLLEIKIPERYPFEPPKVHFITPIFHPNIDNGGRICLDTLKMQPKGSWMPSVNLSTLLTTIRLLMAEPNPDDGLMPEITDLFKQNHAHFVTKAKEMTTQHAKAQF 156
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BLAST of mRNA_H-paniculata_contig16224.3584.1 vs. uniprot
Match: W4GEQ7_9STRA (UBC core domain-containing protein n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=W4GEQ7_9STRA)

HSP 1 Score: 202 bits (513), Expect = 3.180e-60
Identity = 95/148 (64.19%), Postives = 117/148 (79.05%), Query Frame = 3 
Query:  135 RLRKELKMLADEPPPGVCCWPAGSGDCLTHLEAQIQGPEDTPYERGTFLLDIQIPDRYPFEPPKVRFVTPIYHPNIDSGGRICLDSLKMRPAGSWTPSMNVPTLLTTIRLLMAHPNGEDGLMPDITELFLKNPSRFADIARAHVEKHA 578
            R+RKE++ML ++PP G+C WP  +   L  LEAQIQGPE TPYE+G FLL I IP+RYPFEPPKV+FVTPI+HPNID+ GRICLD+LKM+P GSW PS+N+ TLLTTIRLLM  PN +DGLMP+IT+LF +N + F   A A   +HA
Sbjct:    7 RMRKEMEMLENDPPHGICAWPKDNK--LDELEAQIQGPEGTPYEKGIFLLSITIPERYPFEPPKVQFVTPIFHPNIDNAGRICLDTLKMQPKGSWMPSVNLSTLLTTIRLLMTDPNPDDGLMPEITDLFKQNHALFVSKATAMTAQHA 152
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BLAST of mRNA_H-paniculata_contig16224.3584.1 vs. uniprot
Match: A0A1V9YZW2_9STRA (Ubiquitin-conjugating enzyme E2 T-like n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9YZW2_9STRA)

HSP 1 Score: 201 bits (511), Expect = 6.560e-60
Identity = 95/148 (64.19%), Postives = 118/148 (79.73%), Query Frame = 3 
Query:  135 RLRKELKMLADEPPPGVCCWPAGSGDCLTHLEAQIQGPEDTPYERGTFLLDIQIPDRYPFEPPKVRFVTPIYHPNIDSGGRICLDSLKMRPAGSWTPSMNVPTLLTTIRLLMAHPNGEDGLMPDITELFLKNPSRFADIARAHVEKHA 578
            R+RKEL+ML ++PP GVC W     + L  L+AQIQGPE TPYE G FLL+I+IP+RYPFEPPKV F+TPI+HPNID+GGRICLD+LKM+P GSW PS+N+ TLLTTIRLLMA PN +DGLMP+IT+LF +N + F   A+    +HA
Sbjct:    7 RMRKELEMLENDPPHGVCAWTID--EKLDDLQAQIQGPEGTPYENGVFLLEIKIPERYPFEPPKVHFLTPIFHPNIDNGGRICLDTLKMQPKGSWMPSVNLSTLLTTIRLLMAEPNPDDGLMPEITDLFKQNHALFVTKAKEMTAQHA 152
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BLAST of mRNA_H-paniculata_contig16224.3584.1 vs. uniprot
Match: A0A024TYV3_9STRA (UBC core domain-containing protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TYV3_9STRA)

HSP 1 Score: 201 bits (510), Expect = 7.920e-60
Identity = 94/148 (63.51%), Postives = 117/148 (79.05%), Query Frame = 3 
Query:  135 RLRKELKMLADEPPPGVCCWPAGSGDCLTHLEAQIQGPEDTPYERGTFLLDIQIPDRYPFEPPKVRFVTPIYHPNIDSGGRICLDSLKMRPAGSWTPSMNVPTLLTTIRLLMAHPNGEDGLMPDITELFLKNPSRFADIARAHVEKHA 578
            R+RKE++ML ++PP G+C WP  +   L  LEAQIQGPE TPYE+G FLL I IP+RYPFEPPKV+F TPI+HPNID+ GRICLD+LKM+P GSW PS+N+ TLLTTIRLLMA PN +DGLMP+IT+L+ +N + F   A A   +HA
Sbjct:    7 RMRKEMEMLENDPPHGICAWPKDNK--LDELEAQIQGPEGTPYEKGIFLLSILIPERYPFEPPKVQFTTPIFHPNIDNAGRICLDTLKMQPKGSWMPSVNLSTLLTTIRLLMAEPNPDDGLMPEITDLYKQNHALFVSKATAMTAQHA 152
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BLAST of mRNA_H-paniculata_contig16224.3584.1 vs. uniprot
Match: A0A067BXZ1_SAPPC (UBC core domain-containing protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067BXZ1_SAPPC)

HSP 1 Score: 200 bits (508), Expect = 1.270e-59
Identity = 93/148 (62.84%), Postives = 116/148 (78.38%), Query Frame = 3 
Query:  135 RLRKELKMLADEPPPGVCCWPAGSGDCLTHLEAQIQGPEDTPYERGTFLLDIQIPDRYPFEPPKVRFVTPIYHPNIDSGGRICLDSLKMRPAGSWTPSMNVPTLLTTIRLLMAHPNGEDGLMPDITELFLKNPSRFADIARAHVEKHA 578
            R+RKEL+ML  +PP G+C W     D L  L+AQIQGPE TPYE G FLL+I++P+RYPFEPPKV F TPI+HPNID+GGRICLD+LKM+P GSW PS+N+ TLLTTIRLLMA PN +DGLMP+IT+L+ +N + F   A+    +HA
Sbjct:    7 RMRKELEMLETDPPHGICAWSVD--DKLDDLQAQIQGPEGTPYENGVFLLEIKVPERYPFEPPKVHFTTPIFHPNIDNGGRICLDTLKMQPKGSWMPSVNLSTLLTTIRLLMAEPNPDDGLMPEITDLYKQNHALFVTKAKEMTAQHA 152
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig16224.3584.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FYD3_ECTSI3.840e-9774.16UBC core domain-containing protein n=2 Tax=Ectocar... [more]
A0A835Z9Y5_9STRA5.820e-7075.76UBC37-like protein, E2 n=1 Tax=Tribonema minus Tax... [more]
A0A7S2S0X2_9STRA2.260e-6464.81Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A485LQ56_9STRA1.620e-6266.89Aste57867_24328 protein n=1 Tax=Aphanomyces stella... [more]
A0A6G0WGU0_9STRA2.360e-6262.66UBC core domain-containing protein n=1 Tax=Aphanom... [more]
A0A1V9Z8S0_9STRA2.420e-6162.50Ubiquitin-conjugating enzyme E2T-like n=1 Tax=Achl... [more]
W4GEQ7_9STRA3.180e-6064.19UBC core domain-containing protein n=2 Tax=Aphanom... [more]
A0A1V9YZW2_9STRA6.560e-6064.19Ubiquitin-conjugating enzyme E2 T-like n=1 Tax=Thr... [more]
A0A024TYV3_9STRA7.920e-6063.51UBC core domain-containing protein n=1 Tax=Aphanom... [more]
A0A067BXZ1_SAPPC1.270e-5962.84UBC core domain-containing protein n=2 Tax=Saprole... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig16224contigH-paniculata_contig16224:770..5316 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score307.8
Seed ortholog evalue5.9e-81
Seed eggNOG ortholog2880.D7FYD3
KEGG koko:K13960
KEGG Pathwayko03460,map03460
Hectar predicted targeting categoryother localisation
GOsGO:0000209,GO:0003674,GO:0003824,GO:0004842,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0006464,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009987,GO:0016567,GO:0016740,GO:0019538,GO:0019787,GO:0019899,GO:0031625,GO:0032446,GO:0033554,GO:0036211,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044389,GO:0044424,GO:0044464,GO:0050896,GO:0051716,GO:0061630,GO:0061659,GO:0070647,GO:0071704,GO:0140096,GO:1901564
EggNOG free text desc.protein modification by small protein conjugation
EggNOG OGsCOG5078@1,KOG0417@2759
Ec32 ortholog descriptionUbiquitin-conjugating enzyme E2
Ec32 orthologEc-08_003600.1
EC2.3.2.23
COG Functional cat.O
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko03400,ko04121
Exons6
Model size1043
Cds size930
Stop0
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929296.4142616-UTR-H-paniculata_contig16224:769..8821622929296.4142616-UTR-H-paniculata_contig16224:769..882Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig16224 770..882 +
1691480804.9062724-UTR-H-paniculata_contig16224:769..8821691480804.9062724-UTR-H-paniculata_contig16224:769..882Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig16224 770..882 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929296.4282258-CDS-H-paniculata_contig16224:882..10031622929296.4282258-CDS-H-paniculata_contig16224:882..1003Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig16224 883..1003 +
1691480804.9201274-CDS-H-paniculata_contig16224:882..10031691480804.9201274-CDS-H-paniculata_contig16224:882..1003Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig16224 883..1003 +
1622929296.445489-CDS-H-paniculata_contig16224:2404..24741622929296.445489-CDS-H-paniculata_contig16224:2404..2474Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig16224 2405..2474 +
1691480804.9293125-CDS-H-paniculata_contig16224:2404..24741691480804.9293125-CDS-H-paniculata_contig16224:2404..2474Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig16224 2405..2474 +
1622929296.4582832-CDS-H-paniculata_contig16224:3433..35391622929296.4582832-CDS-H-paniculata_contig16224:3433..3539Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig16224 3434..3539 +
1691480804.9374862-CDS-H-paniculata_contig16224:3433..35391691480804.9374862-CDS-H-paniculata_contig16224:3433..3539Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig16224 3434..3539 +
1622929296.4687407-CDS-H-paniculata_contig16224:4126..42251622929296.4687407-CDS-H-paniculata_contig16224:4126..4225Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig16224 4127..4225 +
1691480804.9490778-CDS-H-paniculata_contig16224:4126..42251691480804.9490778-CDS-H-paniculata_contig16224:4126..4225Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig16224 4127..4225 +
1622929296.4809916-CDS-H-paniculata_contig16224:4447..45791622929296.4809916-CDS-H-paniculata_contig16224:4447..4579Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig16224 4448..4579 +
1691480804.9568021-CDS-H-paniculata_contig16224:4447..45791691480804.9568021-CDS-H-paniculata_contig16224:4447..4579Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig16224 4448..4579 +
1622929296.4935675-CDS-H-paniculata_contig16224:4914..53161622929296.4935675-CDS-H-paniculata_contig16224:4914..5316Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig16224 4915..5316 +
1691480804.9692557-CDS-H-paniculata_contig16224:4914..53161691480804.9692557-CDS-H-paniculata_contig16224:4914..5316Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig16224 4915..5316 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig16224.3584.1prot_H-paniculata_contig16224.3584.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig16224 883..5316 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig16224.3584.1

>prot_H-paniculata_contig16224.3584.1 ID=prot_H-paniculata_contig16224.3584.1|Name=mRNA_H-paniculata_contig16224.3584.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=310bp
MAGVGLIRLRKELKMLADEPPPGVCCWPAGSGDCLTHLEAQIQGPEDTPY
ERGTFLLDIQIPDRYPFEPPKVRFVTPIYHPNIDSGGRICLDSLKMRPAG
SWTPSMNVPTLLTTIRLLMAHPNGEDGLMPDITELFLKNPSRFADIARAH
VEKHARQELARGAEAATTAAPEGRPKAKDGHLTRSGNTVTATSRSEGIER
PLLADAEDLPQTRDTATAAAAGADGEGEPNERRERGQGEGKSVGDAEGAK
EGHDAVVGGDGSVMTEISSSTGGGSSGVEAEDREREIACGSAVVDGKGEA
GGGGEHGREG
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mRNA from alignment at H-paniculata_contig16224:770..5316+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig16224.3584.1 ID=mRNA_H-paniculata_contig16224.3584.1|Name=mRNA_H-paniculata_contig16224.3584.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=4547bp|location=Sequence derived from alignment at H-paniculata_contig16224:770..5316+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
CCAAGGTTCGGGTTGGAAACTTTACATCACGCGATACTTAGTAAAAGCAC
GGGGGAGGTGTGTGGACGGAGGTATCTGTCGGTGTCGAGGAACATTCGAG
TTTCTGAACGAATATGGCGGGGGTCGGGTTGATTCGGCTGCGGAAAGAGC
TCAAAATGCTCGCAGATGAGCCGCCTCCTGGGGTGTGCTGCTGGCCGGCG
GGTAGTGGCGATTGCCTTACACACTTGGAAGCACGTGAGCCTTACTTACC
ATCTACTTACCGTCTGTATCTGTTCATCGTTCACATTTGTGCGTAGATAA
GACGTATATAGTATGTCATGTGTATGCACCAGCAGCGTCTTGCCTTGTAT
AGCCGCTTGTTTGCAGCCCTAACCTTTTTTGTTGTACTCTGAATCTGTTG
GTGCAGCAGAAGAATTGGTTCAGCACACCCTACAAAAAAAATAGGAAGTA
TTAAGAGTCGAATAGTCGTTCAACTGAGAAAAGGAACTTCACTCGATGTG
CCCTCATAAACTCGCTGCTCAGTCTAGAATGTTGTCGCTGGGGACCTCTT
GTAGGGGGTGGTTGCCACCTTTGGGGACACGGAAATTGCCGGCTAGGAGC
CATTTTAAATCATTATTATTGTGATCGGTACAGCAAAATAGTCTCTCGGA
AGGTTCAAGTTTCCATTTCACTTTTGAATTTCAAATTTTCGAGGGAACAA
TCACGCCTCCAAGCCAACCGTCCTCATTACATGTATCTACGATATGAGCC
CTCCGTGTTGGTCCATCGTCGGACTGACTTCAGCGCAATATCCATGATCC
TCATTTTTCACGTGACGACACGCACCAGACTTTCACAGCATAGAGTTCTA
TATGCCTGTGCTTGCGTGACCGAGAGTCGCCTCAAGCGCTTTGATTTCGC
GTGTCATTTTTTGTCCCCGGAAGAAATTGCGTTATCTAGGAAGAACCGTC
TTTTGTCTCCCGTTCTCTTGAACACCGCTAGAGGGTTGACCCTCTGTGCA
GTGTCGTTTGTACACACACCACACTACGCAGCAAATGGGACAGCGAGTTC
ATGTCTGCACGTACGGTAGGTGTACATACTACACATAACAGGAGCCCCTG
AACCGGAAACTTTCAAGCGATTCCTGAGAACGTGTCTTTCATGACATTTT
CTGCCGCGATCCGTCACTTTGTTCAAGCTTTGACACATTACGGGATGGAA
GGAAGAGATCAAAGTATATTCTGTCTGTTACTCGATTGTCACTTTACTAA
CGGAGAGTTTTAATGTGTGTGTTTTGTCTTCCTTTTTTCTCTTCGATCTC
AAACGAGAAACGATCATCCTACGCCGTAAGTGTAGCCAAAGTGCACAGTC
ATGTGTTACGTCATGATTTCTACTTGAAAAATGGGGTGTAGTAATACGAT
TTCGGTTACTGTCTGAAAGCAAAAAAAGTATTATAGTTGCAAGTTAACCT
TGTAATGTATCATCTACCTGTTTTTACATTTTTATATTGTTAAAAAATGG
CTTTCTATTCATCCATACCTAGTCTTTTCTACTCCCACCAACGTTTGTAT
TGCAAACCCGTGAAGTAAGAAGAATAGAAAATGAAATCCATCGGTTTGGA
TATCGGCTTATCTCGTTTTCCTTATAATGTTGCAGAGATCCAAGGCCCGG
AAGACACCCCGTATGAGCGCGGGACGTTCTTGCTGGATATACAGATACCT
GATCGGTGGGTGTTGGTATACTAACGAGAAAATTAGTTGGCTGTTCGATG
TATTACACGCCGCTGCTGTACGGGCTGCGACAGCGAGAAACAGCGATCTG
CACCGCTACGACTCTTCTGTATTTTCCACTCGCAGTTGATTTTCTCCAGC
GTCGTACAAACTGTATACCCGGCTCAACGGCAACAAGCCTGCCGCCACGT
TCAATTTTCGCTGGTTCCAATATTGGCAGTGTTTCTCGAGGCGAACAGTT
GTTCATCTTTGTGCCCGGGAGGGGTGGAGGCGAGGCTGCCTCTCAGCTGT
CCGATGCTGTCGCCTTTCTTTTTCGTCGTAGATGCAGCGCAGATGCGATA
GTTCTCGAGTCGTCCTGTGGTCGCCGACTTATATTCGCTATTTAGCAATA
TCGTGTTTGATGATGAAGCACGGCTGCGCCATCACATTCCGTGTATTTCG
CCCACGCGCACGCAGCATAGCTCGCTATGCTCGCACCAATTATGGGCGAA
ACGTCCCCGAGAAATGTTTTTCAGAGGGGACCCTTGAGTACGCAGCTCCA
AAACATTTCGAAACGATGACGACCACGACGAATGAATAGAAGACGATCAT
CCAGGTCGTTTTTTTTATTGGCGTTCGGTGCTTCCCTTCATTTAATGTTT
TTAGCGTCAATAAAGCTCGCCAGTAAAAAAAGAATCAGACAGCGTGTCCA
ATCTTTTTTCGACCGTCAAGGACAGAGCCAGGTATGAATGTTACTCCTCA
AGTATCCTAGCATATTAAGAATGCTTAACACTTCCACGTGATGGTATCGC
TTAGGTTCTGGGTCCGTACACGATCTAAGTAACCCCGCGGTTCGACCTTT
TATCGCCTCTCGCCTCTCGTCCAGCCAACCTATACCGAAAGTGATTCCGC
CAGAAGATACCGTGGTTCCAAGTGCTGTGTGTTTTTTTCACGTCGGATTG
ATTTCGCAATACAGGTATCCTTTCGAGCCGCCAAAGGTCCGTTTTGTTAC
GCCGATCTACCACCCCAACATCGATAGTGGTGGACGTATTTGTCTTGACT
CGCTCAAGATGCGGCCAGCGGTGAGAGAGGGAGGCCTTCTCTTTTGTGGT
CCTGGGAAGGTTCTGTGTTTTGTAGAGGATTTTCATGCTTTTCACTGTTT
TTTTCCCTTCTGTTTTCCCGCCTATTTCCCAGTCATTCATGTATAGCTAT
TACTCCAAACTGTGGCCACAGTACATGTTTCAGCTGTCAGCGGCAAAGGC
GCGATATGGGGAAGGTGAATATAGGATACTGTTAGCTATCGTCACTATGA
GCGCTGAGCTGATTTTGCTGTTGAATGCGGAGACAACCCGAAAGCATGCA
GCGTCTAGTTTTTCTGTATTAGCTGTGTGTCTGAGCCGGCTCTATGTTTC
GTGCATTACACTACGCCGCGACAGGAATACGAGCTTTTTTATTGTTTCTA
CAGTTTGCTGGAGTGTTGCCAATGGTACGCCCACGGCACTTGTTTACTCT
TGGCGGCTTACAGTCCCTGGCAAAACTACTAGTACAATTGCACACCACAC
ATTCTCCTGTGTTCCTTGTTGGACTGTTGGCGCCCCCCCCCCCGCACGCC
GCGCCCGTGCATGTGTTGTACGTCCGCTGTTTTTTTTTTTTAATGTTTCA
TGAATAGGGCTCCTGGACTCCGTCGATGAACGTGCCGACCCTTCTGACCA
CGATACGCTTGCTCATGGCGCATCCTAACGGCGAAGACGGGCTCATGCCA
GACATCGTAAGTGTAAACGATTTGAGACGAGGCTTGTGGGTGATGCCGAT
ACTAGGTATGATGTGAGACCAGAATGATCCGCCTGCATTAGCGTACAGTT
ACACCCCCTTGATCCGTCCTCTCGCCTCCCCGTCCCCACCATGCACCTCA
CGTCCCAACATGCGCTGCGCACCATGTAATGCCTACCGCACATTTCCCCC
CCTCCCACGCGGCGTTTTGGTTCTCAAGACCGAGCTGTTCCTCAAGAACC
CGTCAAGGTTCGCTGACATCGCGCGCGCCCATGTGGAGAAGCACGCACGT
CAAGAGCTCGCACGTGGAGCTGAAGCCGCGACAACGGCAGCGCCAGAAGG
ACGACCGAAAGTGGGTCTGCCCGAATCCAGGGCCGTTGATGCGTGCGAGG
TAGCGTCTTTACATTTCACAACAAGTAAAGAATGCCTGCCACCTCTGGTA
CCTACGTGTGTTTTGTATAAGCCTACGAAGTATAGCTAACTAGGATCATT
TTTGTAAAAGTATTGTTATATATCGAATGTCTGTTCCGGTTTCTCACGAT
CTTGCTGGTTTGCCTTCCCTGCATTTCTATCGAGGCTCATCCTTTCTTAA
TATTTTCATTTACCCCCTCCCGCCCACACCCCCGCTGTGCACCACGTGCT
TCACGCCATAATTCCCCGTTTTTGCGGTTCCAATAATTGCCACAGGCGAA
GGATGGGCATCTCACCCGCAGCGGCAACACAGTCACTGCTACATCAAGAT
CGGAAGGTATCGAAAGACCGCTATTGGCTGACGCGGAAGACTTGCCTCAG
ACAAGAGATACCGCCACTGCCGCAGCCGCGGGGGCTGATGGCGAAGGTGA
ACCGAACGAGCGTAGAGAGCGAGGACAGGGGGAAGGCAAGTCCGTGGGGG
ATGCGGAGGGGGCCAAGGAAGGACATGACGCCGTTGTAGGCGGTGATGGT
AGTGTGATGACGGAGATATCATCGTCGACGGGCGGTGGATCAAGCGGGGT
AGAGGCTGAGGACCGTGAGCGTGAAATCGCCTGCGGTAGCGCTGTTGTTG
ATGGGAAGGGCGAGGCGGGAGGCGGTGGGGAGCATGGAAGAGAGGGG
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Coding sequence (CDS) from alignment at H-paniculata_contig16224:770..5316+

>mRNA_H-paniculata_contig16224.3584.1 ID=mRNA_H-paniculata_contig16224.3584.1|Name=mRNA_H-paniculata_contig16224.3584.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1860bp|location=Sequence derived from alignment at H-paniculata_contig16224:770..5316+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGGCGGGGGTCGGGTTGATTCGGCTGCGGAAAGAGCTCAAAATGCTCGC
AGATGAGCCGCCTCCTGGGGTGTGCTGCTGGCCGGCGGGTAGTGGCGATT
GCCTTACACACTTGGAAGCACATGGCGGGGGTCGGGTTGATTCGGCTGCG
GAAAGAGCTCAAAATGCTCGCAGATGAGCCGCCTCCTGGGGTGTGCTGCT
GGCCGGCGGGTAGTGGCGATTGCCTTACACACTTGGAAGCACAGATCCAA
GGCCCGGAAGACACCCCGTATGAGCGCGGGACGTTCTTGCTGGATATACA
GATACCTGATCGAGATCCAAGGCCCGGAAGACACCCCGTATGAGCGCGGG
ACGTTCTTGCTGGATATACAGATACCTGATCGGTATCCTTTCGAGCCGCC
AAAGGTCCGTTTTGTTACGCCGATCTACCACCCCAACATCGATAGTGGTG
GACGTATTTGTCTTGACTCGCTCAAGATGCGGCCAGCGGTATCCTTTCGA
GCCGCCAAAGGTCCGTTTTGTTACGCCGATCTACCACCCCAACATCGATA
GTGGTGGACGTATTTGTCTTGACTCGCTCAAGATGCGGCCAGCGGGCTCC
TGGACTCCGTCGATGAACGTGCCGACCCTTCTGACCACGATACGCTTGCT
CATGGCGCATCCTAACGGCGAAGACGGGCTCATGCCAGACATCGGCTCCT
GGACTCCGTCGATGAACGTGCCGACCCTTCTGACCACGATACGCTTGCTC
ATGGCGCATCCTAACGGCGAAGACGGGCTCATGCCAGACATCACCGAGCT
GTTCCTCAAGAACCCGTCAAGGTTCGCTGACATCGCGCGCGCCCATGTGG
AGAAGCACGCACGTCAAGAGCTCGCACGTGGAGCTGAAGCCGCGACAACG
GCAGCGCCAGAAGGACGACCGAAAACCGAGCTGTTCCTCAAGAACCCGTC
AAGGTTCGCTGACATCGCGCGCGCCCATGTGGAGAAGCACGCACGTCAAG
AGCTCGCACGTGGAGCTGAAGCCGCGACAACGGCAGCGCCAGAAGGACGA
CCGAAAGCGAAGGATGGGCATCTCACCCGCAGCGGCAACACAGTCACTGC
TACATCAAGATCGGAAGGTATCGAAAGACCGCTATTGGCTGACGCGGAAG
ACTTGCCTCAGACAAGAGATACCGCCACTGCCGCAGCCGCGGGGGCTGAT
GGCGAAGGTGAACCGAACGAGCGTAGAGAGCGAGGACAGGGGGAAGGCAA
GTCCGTGGGGGATGCGGAGGGGGCCAAGGAAGGACATGACGCCGTTGTAG
GCGGTGATGGTAGTGTGATGACGGAGATATCATCGTCGACGGGCGGTGGA
TCAAGCGGGGTAGAGGCTGAGGACCGTGAGCGTGAAATCGCCTGCGGTAG
CGCTGTTGTTGATGGGAAGGGCGAGGCGGGAGGCGGTGGGGAGCATGGAA
GAGAGGGGGCGAAGGATGGGCATCTCACCCGCAGCGGCAACACAGTCACT
GCTACATCAAGATCGGAAGGTATCGAAAGACCGCTATTGGCTGACGCGGA
AGACTTGCCTCAGACAAGAGATACCGCCACTGCCGCAGCCGCGGGGGCTG
ATGGCGAAGGTGAACCGAACGAGCGTAGAGAGCGAGGACAGGGGGAAGGC
AAGTCCGTGGGGGATGCGGAGGGGGCCAAGGAAGGACATGACGCCGTTGT
AGGCGGTGATGGTAGTGTGATGACGGAGATATCATCGTCGACGGGCGGTG
GATCAAGCGGGGTAGAGGCTGAGGACCGTGAGCGTGAAATCGCCTGCGGT
AGCGCTGTTGTTGATGGGAAGGGCGAGGCGGGAGGCGGTGGGGAGCATGG
AAGAGAGGGG
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