mRNA_H-paniculata_contig16199.3568.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig16199.3568.1
Unique NamemRNA_H-paniculata_contig16199.3568.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
BLAST of mRNA_H-paniculata_contig16199.3568.1 vs. uniprot
Match: A0A401H607_9APHY (Transposon Ty5-1 protein n=4 Tax=Sparassis crispa TaxID=139825 RepID=A0A401H607_9APHY)

HSP 1 Score: 212 bits (540), Expect = 8.260e-59
Identity = 158/476 (33.19%), Postives = 241/476 (50.63%), Query Frame = 1
Query:   43 FEQVERPQGKLVVGTKMLYRRKTNANGEILKYNCRSVAQGLCQKLGEHYTVSESPTPAMAVTRMAPSTTAINDMELRHINFK*AFLTADNDTEMYIELSEAYQALPGAVGKLKKAV----QAGRCWYNELNNDLKAPGFQSSYAKLCAYSRIVDRELDILVVAYGYDRLIASKGNEAMDWFVAELESGYKIQDLEEVSYYIGCPITRNRDAWELKIYQHLYVQTIAV--GIVKTSAIPVEAGVKSLLKEDGPKSPEEEKEMQRFRNRESV--RLM*IATMLRPDIANPVPSMGTFCEKLGVQHKEAVEKILQYVLQTGDKGTTYGR----KPYHGNEMVAFADSNHSTCLDTRQLVSGGAVMLGGGTINWLSRTQETTSSSTPELECVAL*EVVKEALFLRQVQAFMVPTIQDYPTVIKEDNEEAIKMANNKHSSRRTRHIDVKHHVVCDAAEAGMVKIDYVGTEDQHADELTKSL 1434
            +E VE P+ +  VG K +  +KTN  GEI+KY  R VA+G  Q  G  YT +  P   +   R      AI D E+  ++ K A+L      E+Y+   E Y      V KLKK +    Q+GR W   LN  L    F+  ++  CAY RI   +++I+ V +  D LI +     MD    EL + +++ DL E    +G  I R+R    +KI Q  Y+++I    G+   + + +     ++L+++    PE + E  R     S+   LM  A   RPDIA+ V  + +F    G+ H  A +++L+Y+  T + G  YG     KP   +  V ++D++++  +  R+ +SG    LG GTI W S+ Q T +SST E E +A  E  KEA++LR +   +    QD PT++ EDN  AI +A +     +++H DVKHH V +      + I Y  TED  AD LTKSL
Sbjct:   69 WELVEPPEDRKPVGNKWVLVKKTNKEGEIIKYKARLVAKGYSQIPGMDYTETFVPVVRLETIRAILGLAAILDWEIGQMDVKGAYLNGTLKEEVYMRQPEGYSDGTYRVCKLKKTLYGLKQSGREWNIVLNRKLLDARFKRLFSDPCAYIRIKGDKIEIVTV-WVDDLLIFTNDCALMDQLKRELRNMFEVTDLGEPRKIVGIEIERDRSKRTIKISQTKYIESILHKNGLTNANTVGMPLDPNTVLEKE---EPETDDECDRDNGYASLVGSLMYAAIATRPDIAHAVQRLSSFTANPGMAHWTAAKRVLRYLSGTRELGIIYGPIADVKPEDQSIFVGYSDADYANDIRDRKSISGYLFKLGNGTITWSSKKQTTVASSTTEAEYMASAEAAKEAVWLRTLFKEIGFEQQD-PTILFEDNTAAISIARDPQFHAKSKHFDVKHHYVREKLRDKYIDIHYCPTEDMIADILTKSL 539          
BLAST of mRNA_H-paniculata_contig16199.3568.1 vs. uniprot
Match: A0A401GA31_9APHY (Integrase catalytic domain-containing protein n=2 Tax=Sparassis crispa TaxID=139825 RepID=A0A401GA31_9APHY)

HSP 1 Score: 215 bits (547), Expect = 4.230e-58
Identity = 159/476 (33.40%), Postives = 243/476 (51.05%), Query Frame = 1
Query:   43 FEQVERPQGKLVVGTKMLYRRKTNANGEILKYNCRSVAQGLCQKLGEHYTVSESPTPAMAVTRMAPSTTAINDMELRHINFK*AFLTADNDTEMYIELSEAYQALPGAVGKLKKAV----QAGRCWYNELNNDLKAPGFQSSYAKLCAYSRIVDRELDILVVAYGYDRLIASKGNEAMDWFVAELESGYKIQDLEEVSYYIGCPITRNRDAWELKIYQHLYVQTIAV--GIVKTSAIPVEAGVKSLLKEDGPKSPEEEKEMQRFRNRESV--RLM*IATMLRPDIANPVPSMGTFCEKLGVQHKEAVEKILQYVLQTGDKGTTYGR----KPYHGNEMVAFADSNHSTCLDTRQLVSGGAVMLGGGTINWLSRTQETTSSSTPELECVAL*EVVKEALFLRQVQAFMVPTIQDYPTVIKEDNEEAIKMANNKHSSRRTRHIDVKHHVVCDAAEAGMVKIDYVGTEDQHADELTKSL 1434
            +E VE P+ +  VG K +  +KTN  GEI+KY  R VA+G  Q  G  YT + +P   +   R      AI D E+  ++ K A+L      E+Y+   E Y      V KLKK +    Q+GR W   LN  L   GF+  ++  CAY RI   +++I+ V +  D LI +     MD    EL + +++ DL E    +G  I R+R    +KI Q  Y+++I    G+   + + +     ++L+++ PK+ +E     R     S+   LM  A   RPDIA+ V  + +F    G+ H  A + +L+Y+  T + G  YG     KP   +  V ++D++++  +  R+ +SG    LG GTI W S+ Q T +SST E E +A  E  KEA++LR +   +    QD PT++ EDN  AI +A +     +++H DVKHH V +      + I Y  TED  AD LTKSL
Sbjct:  325 WELVEPPEDRKPVGNKWVLVKKTNKEGEIIKYKARLVAKGYSQIPGMDYTETFAPVVRLETIRAILGLAAILDWEIGQMDVKGAYLNGTLKEEVYMRQPEGYSDGTYRVCKLKKTLYGLKQSGREWNIVLNRKLLDAGFKRLFSDPCAYIRIKGDKIEIVTV-WVDDLLIFTNDCALMDQLKRELRNMFEVTDLGEPRKIVGIEIERDRSKQTIKISQTKYIESILHKNGLTNANTVGMPLDPNTVLEKEEPKTDDE---CDRDNGYASLVGSLMYAAIATRPDIAHAVQRLSSFTANPGMAHWTAAKCVLRYLSGTRELGIIYGPIADVKPEDQSIFVGYSDADYANDIRDRKSISGYLFKLGNGTIMWSSKKQTTVASSTTEAEYMASAEAAKEAVWLRTLFKEIGFEQQD-PTILFEDNTAAISIARDPQFHAKSKHFDVKHHYVREKLRDKYIDIHYCPTEDMIADILTKSL 795          
BLAST of mRNA_H-paniculata_contig16199.3568.1 vs. uniprot
Match: A0A401GH23_9APHY (Uncharacterized protein n=1 Tax=Sparassis crispa TaxID=139825 RepID=A0A401GH23_9APHY)

HSP 1 Score: 215 bits (547), Expect = 4.110e-57
Identity = 158/476 (33.19%), Postives = 242/476 (50.84%), Query Frame = 1
Query:   43 FEQVERPQGKLVVGTKMLYRRKTNANGEILKYNCRSVAQGLCQKLGEHYTVSESPTPAMAVTRMAPSTTAINDMELRHINFK*AFLTADNDTEMYIELSEAYQALPGAVGKLKKAV----QAGRCWYNELNNDLKAPGFQSSYAKLCAYSRIVDRELDILVVAYGYDRLIASKGNEAMDWFVAELESGYKIQDLEEVSYYIGCPITRNRDAWELKIYQHLYVQTIAV--GIVKTSAIPVEAGVKSLLKEDGPKSPEEEKEMQRFRNRESV--RLM*IATMLRPDIANPVPSMGTFCEKLGVQHKEAVEKILQYVLQTGDKGTTYGR----KPYHGNEMVAFADSNHSTCLDTRQLVSGGAVMLGGGTINWLSRTQETTSSSTPELECVAL*EVVKEALFLRQVQAFMVPTIQDYPTVIKEDNEEAIKMANNKHSSRRTRHIDVKHHVVCDAAEAGMVKIDYVGTEDQHADELTKSL 1434
            +E VE P+ +  VG K +  +KTN  GEI+KY  R V +G  Q  G  YT + +P   +   R      AI D E+  ++ K A+L      E+Y+   E Y      V KLKK +    Q+GR W   LN  L   GF+  ++  CAY RI   +++I+ V +  D LI +     MD    EL + +++ DL E    +G  I R+R    +KI Q  Y+++I    G+   + + +     ++L+++    PE + E  R     S+   LM  A   RPDIA+ V  + +F    G+ H  A +++L+Y+  T + G  YG     KP   +  V ++D++++  +  R+ +SG    LG GTI W S+ Q T +SST E E +A  E  KEA++LR +   +    QD PT++ EDN  AI +A +     +++H DVKHH V +      + I Y  TED  AD LTKSL
Sbjct: 1476 WELVEPPEDRKPVGNKWVLVKKTNKEGEIIKYKARLVVKGYSQIPGMDYTETFAPVVRLETIRAILGLAAILDWEIGQMDVKGAYLNGTLKEEVYMRQPEGYSDGTYRVCKLKKTLYGLKQSGREWNIVLNRKLLDAGFKRLFSDPCAYIRIKGDKIEIVTV-WVDDLLIFTNDCALMDQLKRELRNMFEVTDLGEPRKIVGIEIERDRSKRTIKISQTKYIESILHKNGLTNANTVGMPLDPNTVLEKE---EPETDDECNRDNGYASLVGSLMYAAIATRPDIAHAVQRLSSFTANPGMAHWTAAKRVLRYLSGTRELGIIYGPIADVKPEDQSIFVGYSDADYANDIRDRKSISGYLFKLGNGTITWSSKKQTTVASSTTEAEYMASAEAAKEAVWLRTLFKEIGFEQQD-PTILFEDNTAAISIARDPQFHAKSKHFDVKHHYVREKLRDKYIDIHYCPTEDMIADILTKSL 1946          
BLAST of mRNA_H-paniculata_contig16199.3568.1 vs. uniprot
Match: A0A6H5JKS3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JKS3_9PHAE)

HSP 1 Score: 214 bits (545), Expect = 6.220e-57
Identity = 150/482 (31.12%), Postives = 250/482 (51.87%), Query Frame = 1
Query:   10 KEIAGLIEKGVFEQVER-PQGKLVVGTKMLYRRKTNANGEILKYNCRSVAQGLCQKLGEHYTVSESPTPAMAVTRMAPSTTAINDMELRHINFK*AFLTADNDTEMYIELSEAYQALPGAVGKLKKAV----QAGRCWYNELNNDLKAPGFQSSYAKLCAYSRIVDRELDILVVAYGYDRLIASKGNEAMDWFVAELESGYKIQDLEEVSYYIGCPITRNRDAWELKIYQHLYVQTIA--VGIVKTSAIPVEAGVKSLLKEDGPKSPEEEKEMQRFRNRESVRLM*IATMLRPDIANPVPSMGTFCEKLGVQHKEAVEKILQYVLQTGDKGTTYGRKPYHGNEMVAFADSNHSTCLDTRQLVSGGAVMLGGGTINWLSRTQETTSSSTPELECVAL*EVVKEALFLRQVQAFMVPTIQDYPTVIKEDNEEAIKMANNKHSSRRTRHIDVKHHVVCDAAEAGMVKIDYVGTEDQHADELTKSL 1434
            KE+ G  + G F ++E+ P+G+  V TK ++  KT+  G I  +  R VA+G  Q  G+ Y  S S  PA++  ++A +      +  RH + K A+  A    E+Y+ +++   A+ G V K+++A+    Q+GR W  E  N L   G++   A  C + +IVD ++  ++V Y  D +      E  +  +  L     ++DL E ++Y GC I R+ +     + Q  Y+  +    GI  T++ P +        E GPK  +E    +  R      LM  AT  RPDIA  + ++        ++  +A+ +IL Y+  T D G TY R    G ++  + D++++     R+ V+G AV +GG  ++  S+TQ   S ST E E +A  E VKEALF+R V +F+ P        + EDN+ AI +  N  SS R++HIDV+ H + +  ++G + ++Y+ T++QHAD LTK+L
Sbjct:  757 KEMDGHEKTGTFSKIEKLPEGRKAVSTKWVFDYKTDEKGLITDFKARLVARGFSQVHGQDYHHSSSACPAVSSIKLAMAFATEGGLPTRHFDIKQAYTHAKIQEELYVRIADGSGAMAGKVLKVERALYGLKQSGREWGFEAANILVDSGYEQCRADPCVFRKIVDGKVVSIIVIYVDDIMYVGSEEEGEE-LLTSLRKTLPVKDLGECTWYDGCAIERDLELGTTTLSQKAYIAGLMDRFGITTTASTPADPNA-----ELGPKRDDEPGVDKPVRQAIGC-LMWPATFTRPDIATALNAVQRNAHAPTMRDWKALVQILSYLNATMDLGITYVRGS--GLDLEVYVDASYADRDTGRRSVTGIAVTVGGTVVSHASKTQRIVSLSTSEAEYIAAGEGVKEALFVRAVLSFIAPETSGAKIKVLEDNQGAISLVQNPFSSARSKHIDVRFHFIRELFKSGRISVEYIPTDEQHADLLTKAL 1229          
BLAST of mRNA_H-paniculata_contig16199.3568.1 vs. uniprot
Match: A0A6H5JFG2_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFG2_9PHAE)

HSP 1 Score: 204 bits (519), Expect = 1.040e-56
Identity = 136/399 (34.09%), Postives = 215/399 (53.88%), Query Frame = 1
Query:  259 DMELRHINFK*AFLTADNDTEMYIELSEAYQALPGAVGKLKKAV----QAGRCWYNELNNDLKAPGFQSSYAKLCAYSRIVDRELDILVVAYGYDRLIASKGNEAMDWFVAELESGYKIQDLEEVSYYIGCPITRNRDAWELKIYQHLYVQTIAV--GIVKTSAIPVEAGVKSLLKEDGPKSPEEEKEMQRFRNRESV-RLM*IATMLRPDIANPVPSMGTFCEKLGVQHKEAVEKILQYVLQTGDKGTTYGRKPYHGNEMVAFADSNHSTCLDTRQLVSGGAVMLGGGTINWLSRTQETTSSSTPELECVAL*EVVKEALFLRQVQAFMVPTIQDYPTVIKEDNEEAIKMANNKHSSRRTRHIDVKHHVVCDAAEAGMVKIDYVGTEDQHADELTKSL 1434
            +++L H + + AF+ ++ + ++Y+ L +   AL G + KL K++    QA R W+  L   L A GF+   A  C + R+++    +L++    D + A    E  D F A+L     +++L E+ +Y GC   RN++   L I Q  +   +A   G+V   ++P+ +GVK L   D  +   E      F  RE V  LM +AT  RPDIAN V ++  +C    + H  A   IL Y  +T   G ++ R    G  +  +AD++ ++    R+ VSGG V  GGG ++W SRTQ+  + ST E E VAL +VVKE LFLRQ+  FM+P +      + EDN+ AI++A N  S+  ++HIDV+HH + +  E   + + +V +  Q AD LTKSL
Sbjct:   56 NLDLCHFDVEQAFVRSELEEDVYMRLPQGCGALSGMIVKLGKSLYGLRQASRQWHAMLKRCLVALGFEQCMADACVF-RLIEDGCVVLILVVHVDDIFAVGERERCDKFGADLNKSVPVKNLGELRWYSGCFYERNKETGRLTISQQTFTDELAAEYGVVGGRSVPMSSGVK-LSDFDADEVATE------FPFRELVGSLMWLATQTRPDIANAVRAVARYCASPKLVHWNAAMDILGYARRTSHFGISFQRGTVEGFSLQGYADADFASKAADRRSVSGGIVTCGGGAVSWFSRTQKCVTLSTTEAEYVALGDVVKEILFLRQIWRFMLPQVGMPCIPVFEDNQGAIQLAQNPISNSNSKHIDVRHHFLRELVERKEISVIHVPSPYQRADFLTKSL 446          
BLAST of mRNA_H-paniculata_contig16199.3568.1 vs. uniprot
Match: A0A401GYE9_9APHY (Integrase catalytic domain-containing protein n=9 Tax=Sparassis crispa TaxID=139825 RepID=A0A401GYE9_9APHY)

HSP 1 Score: 213 bits (542), Expect = 1.640e-56
Identity = 157/476 (32.98%), Postives = 242/476 (50.84%), Query Frame = 1
Query:   43 FEQVERPQGKLVVGTKMLYRRKTNANGEILKYNCRSVAQGLCQKLGEHYTVSESPTPAMAVTRMAPSTTAINDMELRHINFK*AFLTADNDTEMYIELSEAYQALPGAVGKLKKAV----QAGRCWYNELNNDLKAPGFQSSYAKLCAYSRIVDRELDILVVAYGYDRLIASKGNEAMDWFVAELESGYKIQDLEEVSYYIGCPITRNRDAWELKIYQHLYVQTIAV--GIVKTSAIPVEAGVKSLLKEDGPKSPEEEKEMQRFRNRESV--RLM*IATMLRPDIANPVPSMGTFCEKLGVQHKEAVEKILQYVLQTGDKGTTYGR----KPYHGNEMVAFADSNHSTCLDTRQLVSGGAVMLGGGTINWLSRTQETTSSSTPELECVAL*EVVKEALFLRQVQAFMVPTIQDYPTVIKEDNEEAIKMANNKHSSRRTRHIDVKHHVVCDAAEAGMVKIDYVGTEDQHADELTKSL 1434
            +E VE P+ +  VG K +  +KTN  GEI+KY  R VA+G  Q  G  YT + +P   +   R      AI D E+  ++ K A+L      E+Y+   E Y      V KLKK +    Q+GR W   LN  L   GF+  ++  CAY RI   +++I+ V +  D LI +     MD    EL + +++ DL E    +G  I R+R    +KI Q  Y+++I    G+   + + +     ++L+++    PE + E  R     S+   LM  A   RPDIA+ V  + +F    G+ H  A +++L+Y+  T + G  YG     KP   +  V ++D++++  +  R+ +SG    LG G I W S+ Q T +SST E E +A  E  KEA++L+ +   +    QD PT++ EDN  AI +A +     +++H DVKHH V +      + I Y  TED  AD LTKSL
Sbjct:  843 WELVEPPEDRKPVGNKWVLVKKTNKEGEIIKYKARLVAKGYSQIPGMDYTETFAPVVRLETIRAILGLAAILDWEIGQMDVKGAYLNGTLKEEVYMRQPEGYSDGTYRVCKLKKTLYGLKQSGREWNIMLNRKLLDAGFKRLFSDPCAYIRIKGDKIEIVTV-WVDDLLIFTNDCALMDQLKRELRNMFEVTDLGEPRKIVGIEIERDRSKRTIKISQTKYIESILHKNGLTNANTVGMPLDPNTVLEKE---EPETDDECDRDNGYASLVGSLMYAAIATRPDIAHAVQRLSSFTANPGMAHWTAAKRVLRYLSGTRELGIIYGPIADVKPEDQSIFVGYSDADYANDIRDRKSISGYLFKLGNGMITWSSKKQTTVASSTTEAEYMASAEAAKEAVWLQTLFREIGFEQQD-PTILLEDNTAAISIARDPQFHAKSKHFDVKHHYVREKLRDKYIDIHYCPTEDMIADILTKSL 1313          
BLAST of mRNA_H-paniculata_contig16199.3568.1 vs. uniprot
Match: A0A6H5L175_9PHAE (Uncharacterized protein n=9 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L175_9PHAE)

HSP 1 Score: 213 bits (542), Expect = 1.830e-56
Identity = 149/482 (30.91%), Postives = 250/482 (51.87%), Query Frame = 1
Query:   10 KEIAGLIEKGVFEQVER-PQGKLVVGTKMLYRRKTNANGEILKYNCRSVAQGLCQKLGEHYTVSESPTPAMAVTRMAPSTTAINDMELRHINFK*AFLTADNDTEMYIELSEAYQALPGAVGKLKKAV----QAGRCWYNELNNDLKAPGFQSSYAKLCAYSRIVDRELDILVVAYGYDRLIASKGNEAMDWFVAELESGYKIQDLEEVSYYIGCPITRNRDAWELKIYQHLYVQTIA--VGIVKTSAIPVEAGVKSLLKEDGPKSPEEEKEMQRFRNRESVRLM*IATMLRPDIANPVPSMGTFCEKLGVQHKEAVEKILQYVLQTGDKGTTYGRKPYHGNEMVAFADSNHSTCLDTRQLVSGGAVMLGGGTINWLSRTQETTSSSTPELECVAL*EVVKEALFLRQVQAFMVPTIQDYPTVIKEDNEEAIKMANNKHSSRRTRHIDVKHHVVCDAAEAGMVKIDYVGTEDQHADELTKSL 1434
            KE+ G  + G F ++E+ P+G+  V TK ++  KT+  G I  +  R VA+G  Q  G+ Y  S S  PA++  ++A +      +  RH + K A+  A    E+Y+ +++   A+ G V K+++A+    Q+GR W  E  N L   G++   A  C + +IVD ++  ++V Y  D +      E  +  +  L     ++DL E ++Y GC I R+ +     + Q  Y+  +    GI  T++ P +        + GPK  +E    +  R      LM  AT  RPDIA  + ++        ++  +A+ +IL Y+  T D G TY R    G ++  + D++++     R+ V+G AV +GG  ++  S+TQ   S ST E E +A  E VKEALF+R V +F+ P        + EDN+ AI +  N  SS R++HIDV+ H + +  ++G + ++Y+ T++QHAD LTK+L
Sbjct: 1310 KEMDGHEKTGTFSKIEKLPEGRKAVSTKWVFDYKTDEKGLITDFKARLVARGFSQVHGQDYHHSSSACPAVSSIKLAMAFATEGGLPTRHFDIKQAYTHAKIQEELYVRIADGSGAMAGKVLKVERALYGLKQSGREWGFEAANILVDSGYEQCRADPCVFRKIVDGKVVSIIVIYVDDIMYVGSEEEGEE-LLTSLRKTLPVKDLGECTWYDGCAIERDLELGTTTLSQKAYIAGLMDRFGITTTASTPADPNA-----DLGPKRDDEPGVDKPVRQAIGC-LMWPATFTRPDIATALNAVQRNAHAPTMRDWKALVQILSYLNATMDLGITYVRGS--GLDLEVYVDASYADRDTGRRSVTGIAVTVGGTVVSHASKTQRIVSLSTSEAEYIAAGEGVKEALFVRAVLSFIAPETSGAKIKVLEDNQGAISLVQNPFSSARSKHIDVRFHFIRELFKSGRISVEYIPTDEQHADLLTKAL 1782          
BLAST of mRNA_H-paniculata_contig16199.3568.1 vs. uniprot
Match: A0A401GYC1_9APHY (CCHC-type domain-containing protein n=1 Tax=Sparassis crispa TaxID=139825 RepID=A0A401GYC1_9APHY)

HSP 1 Score: 211 bits (537), Expect = 3.590e-56
Identity = 154/476 (32.35%), Postives = 241/476 (50.63%), Query Frame = 1
Query:   43 FEQVERPQGKLVVGTKMLYRRKTNANGEILKYNCRSVAQGLCQKLGEHYTVSESPTPAMAVTRMAPSTTAINDMELRHINFK*AFLTADNDTEMYIELSEAYQALPGAVGKLKKAV----QAGRCWYNELNNDLKAPGFQSSYAKLCAYSRIVDRELDILVVAYGYDRLIASKGNEAMDWFVAELESGYKIQDLEEVSYYIGCPITRNRDAWELKIYQHLYVQTIAV--GIVKTSAIPVEAGVKSLLKEDGPKSPEEEKEMQRFRNRESV--RLM*IATMLRPDIANPVPSMGTFCEKLGVQHKEAVEKILQYVLQTGDKGTTYGR----KPYHGNEMVAFADSNHSTCLDTRQLVSGGAVMLGGGTINWLSRTQETTSSSTPELECVAL*EVVKEALFLRQVQAFMVPTIQDYPTVIKEDNEEAIKMANNKHSSRRTRHIDVKHHVVCDAAEAGMVKIDYVGTEDQHADELTKSL 1434
            +E VE P+ +  +G K +  +KTN  GEI+KY  R VA+G  Q  G  YT + +P   +   R      AI D E+  ++ K A+L      E+Y+   + Y      V KLKK +    Q+GR W   LN  L   GF+  ++  C Y RI   +++I+ V +  D LI +     MD    EL + +++ DL E    +G  I R+R    +KI Q  Y+++I    G+   + + +     ++L+++    PE + E  R     S+   LM  A  +RPDIA+ V  + +F    G+ H  A + +L+Y+    + G  YG     KP   +  V ++D++++  +  R+ +SG    LG G I W S+ Q T +SST E E +A  E  KEA++L+ +   +    QD PT++ EDN  AI +A +     +++H DVKHH VC+      + I Y  TED  AD LTKSL
Sbjct:  485 WELVEPPEDRKPIGNKWVLVKKTNKEGEIIKYKARLVAKGYSQIPGMDYTETFAPVVHLETIRAILGLAAILDWEIGQMDVKGAYLNGTLKEEVYMRQPKGYNDGTYRVCKLKKTLYRLKQSGREWNIVLNRKLLDAGFKHLFSDPCVYIRIKGDKIEIVTV-WVDDLLIFTNDCALMDQLKRELRNMFEVTDLGEPQKIVGIEIERDRSKQTIKISQTKYIESILHKNGLTNANTVGMPLDPNTVLEKE---EPETDDECDRDNGYASLIGSLMYTAIAMRPDIAHTVQRLSSFTANPGMAHWTAAKCVLRYLSGMRELGIIYGPIADVKPKDQSIFVGYSDADYANDIRDRKSISGYLFKLGNGMITWSSKKQTTVASSTTEAEYMASAEAAKEAMWLQTLFKEIGFEQQD-PTILFEDNTVAISIARDPQFHAKSKHFDVKHHYVCEKLRDKYIDIHYCPTEDMIADILTKSL 955          
BLAST of mRNA_H-paniculata_contig16199.3568.1 vs. uniprot
Match: A0A401GVT9_9APHY (Uncharacterized protein n=1 Tax=Sparassis crispa TaxID=139825 RepID=A0A401GVT9_9APHY)

HSP 1 Score: 212 bits (539), Expect = 5.010e-56
Identity = 157/476 (32.98%), Postives = 242/476 (50.84%), Query Frame = 1
Query:   43 FEQVERPQGKLVVGTKMLYRRKTNANGEILKYNCRSVAQGLCQKLGEHYTVSESPTPAMAVTRMAPSTTAINDMELRHINFK*AFLTADNDTEMYIELSEAYQALPGAVGKLKKAV----QAGRCWYNELNNDLKAPGFQSSYAKLCAYSRIVDRELDILVVAYGYDRLIASKGNEAMDWFVAELESGYKIQDLEEVSYYIGCPITRNRDAWELKIYQHLYVQTIAV--GIVKTSAIPVEAGVKSLLKEDGPKSPEEEKEMQRFRNRESV--RLM*IATMLRPDIANPVPSMGTFCEKLGVQHKEAVEKILQYVLQTGDKGTTYGR----KPYHGNEMVAFADSNHSTCLDTRQLVSGGAVMLGGGTINWLSRTQETTSSSTPELECVAL*EVVKEALFLRQVQAFMVPTIQDYPTVIKEDNEEAIKMANNKHSSRRTRHIDVKHHVVCDAAEAGMVKIDYVGTEDQHADELTKSL 1434
            +E VE P+ +  VG K +  +KTN  GEI+KY  R VA+G  Q  G  YT + +P   +   R      AI D E+  ++ K A+L      E+Y+   E Y      V KLKK +    Q+G+ W   LN  L   GF+  ++  CAY RI   +++I+ V +  D LI +     MD    EL + +++ DL E    +G  I R+R    +KI Q  Y+++I    G+   + + +     ++L+++    PE + E  R     S+   LM  A   RPDIA+ V  + +F    G+ H  A +++L+Y+  T + G  YG     KP   +  V ++D++++  +  R+ +S     LG GTI W S+ Q T +SST E E +A  E  KEA++LR +   +    QD PT++ EDN  AI +A +     +++H DVKHH V +      + I Y  TED  AD LTKSL
Sbjct: 2328 WELVEPPEDRKPVGNKWVLVKKTNKEGEIIKYKARLVAKGYSQIPGMDYTETFAPVVRLETIRAILGLAAILDWEIGQMDVKGAYLNGTLKEEVYMRQPEGYSDGTYRVCKLKKTLYGLKQSGQEWNIVLNRKLLDAGFKRLFSDPCAYIRIKGDKIEIVTV-WVDDLLIFTNDCALMDQLKRELRNMFEVTDLGEPRKIVGIEIERDRSKRTIKISQTKYIESILHKNGLTNANTVGMPLDPNTVLEKE---EPETDDECDRDNGYASLVGSLMYAAIATRPDIAHAVQRLSSFTANPGMAHWTAAKRVLRYLSGTRELGIIYGPIADVKPEDQSIFVGYSDADYANDIRDRKSISEYLFKLGNGTITWSSKKQTTVASSTTEAEYMASAEAAKEAVWLRTLFKEIGFEQQD-PTILFEDNTAAISIARDPQFHAKSKHFDVKHHYVREKLRDKYIDIHYCPTEDMIADILTKSL 2798          
BLAST of mRNA_H-paniculata_contig16199.3568.1 vs. uniprot
Match: A0A6H5L6D6_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6D6_9PHAE)

HSP 1 Score: 203 bits (517), Expect = 5.520e-54
Identity = 145/480 (30.21%), Postives = 240/480 (50.00%), Query Frame = 1
Query:   10 KEIAGLIEKGVFEQVER-PQGKLVVGTKMLYRRKTNANGEILKYNCRSVAQGLCQKLGEHYTVSESPTPAMAVTRMAPSTTAINDMELRHINFK*AFLTADNDTEMYIELSEAYQALPGAVGKLKKAV----QAGRCWYNELNNDLKAPGFQSSYAKLCAYSRIVDRELDILVVAYGYDRLIASKGNEAMDWFVAELESGYKIQDLEEVSYYIGCPITRNRDAWELKIYQHLYVQTIAVGIVKTSAIPVEAGVKSLLKEDGPKSPEEEKEMQRFRNRESVRLM*IATMLRPDIANPVPSMGTFCEKLGVQHKEAVEKILQYVLQTGDKGTTYGRKPYHGNEMVAFADSNHSTCLDTRQLVSGGAVMLGGGTINWLSRTQETTSSSTPELECVAL*EVVKEALFLRQVQAFMVPTIQDYPTVIKEDNEEAIKMANNKHSSRRTRHIDVKHHVVCDAAEAGMVKIDYVGTEDQHADELTKSL 1434
            KE  G  + G F ++   P+G+  +  K ++  KTN  G I+ +  R VA+G  Q  G  +  S S  P+    +   + +  N     H + K A+  A    E+Y+ L +      G   K+++A+    Q+GR W  E  + L + G++      C + ++VD E+  L+V Y  D ++ S   E  +  +A L+  + ++DL + ++Y GC I  + +    K+ Q  Y++++      T+  P  A V   L   GPK  +E    +  R  E++  +      RPDIA P+  +         +   A+ +I+ Y+ +T D G TY R    G ++  F DS+++     R+  +G AV +GG  +   ++TQ  T+ ST E E +A  E VKEALF+R V +F+ P        ++EDNE A+ +  N  SS R++HIDV+ H + +  +AG +  DYV TE+QHAD LTK L
Sbjct:  318 KEFDGHKKTGTFSEISGLPEGRKAISAKWIFSHKTNEKGLIVDFKARMVARGFSQIPGVDFHHSSSACPSAVSIKTMVAVSTENGRRPVHWDIKQAYTHAKLKEEIYLRLPDGCGVWTGKAVKVERALYGLEQSGREWGFEAADALISNGYEQCRVDPCIFRKVVDGEVVGLIVIY-VDDIMLSATEEEREELLASLQKRFPVKDLGDCTWYDGCAIEVDLENGTTKLSQTAYIESMLNRFNVTTTAPTPAVVDDDL---GPKRDDESSVDKPVR--EAIGCLMWLLFTRPDIALPLNKLQKIAHSPTERMWNALVRIMSYLNETKDLGITYVRGS--GLDLDVFVDSSYADSTVDRRSTTGLAVTVGGTVVCASTKTQPVTAQSTTEAEYIAAGEGVKEALFVRGVLSFIAPETSGATIRVREDNEGALALVQNPFSSARSKHIDVRFHFIRELFKAGKITADYVSTEEQHADMLTKVL 789          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig16199.3568.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A401H607_9APHY8.260e-5933.19Transposon Ty5-1 protein n=4 Tax=Sparassis crispa ... [more]
A0A401GA31_9APHY4.230e-5833.40Integrase catalytic domain-containing protein n=2 ... [more]
A0A401GH23_9APHY4.110e-5733.19Uncharacterized protein n=1 Tax=Sparassis crispa T... [more]
A0A6H5JKS3_9PHAE6.220e-5731.12Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JFG2_9PHAE1.040e-5634.09Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A401GYE9_9APHY1.640e-5632.98Integrase catalytic domain-containing protein n=9 ... [more]
A0A6H5L175_9PHAE1.830e-5630.91Uncharacterized protein n=9 Tax=Ectocarpus sp. CCA... [more]
A0A401GYC1_9APHY3.590e-5632.35CCHC-type domain-containing protein n=1 Tax=Sparas... [more]
A0A401GVT9_9APHY5.010e-5632.98Uncharacterized protein n=1 Tax=Sparassis crispa T... [more]
A0A6H5L6D6_9PHAE5.520e-5430.21Reverse transcriptase Ty1/copia-type domain-contai... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig16199contigH-paniculata_contig16199:887..2320 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score64.3
Seed ortholog evalue6.4e-08
Seed eggNOG ortholog164328.Phyra71619
Hectar predicted targeting categoryother localisation
EggNOG free text desc.Reverse transcriptase (RNA-dependent DNA polymerase)
EggNOG OGs3QHW0@4776,COG2801@1,KOG0017@2759
COG Functional cat.L
Best tax levelPeronosporales
Best eggNOG OGNA|NA|NA
Exons1
Model size1434
Cds size525
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig16199.3568.1prot_H-paniculata_contig16199.3568.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig16199 1475..1999 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929294.4472728-UTR-H-paniculata_contig16199:886..14741622929294.4472728-UTR-H-paniculata_contig16199:886..1474Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig16199 887..1474 -
1691480803.9685757-UTR-H-paniculata_contig16199:886..14741691480803.9685757-UTR-H-paniculata_contig16199:886..1474Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig16199 887..1474 -
1622929294.4893622-UTR-H-paniculata_contig16199:1999..23201622929294.4893622-UTR-H-paniculata_contig16199:1999..2320Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig16199 2000..2320 -
1691480803.99445-UTR-H-paniculata_contig16199:1999..23201691480803.99445-UTR-H-paniculata_contig16199:1999..2320Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig16199 2000..2320 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929294.4718544-CDS-H-paniculata_contig16199:1474..19991622929294.4718544-CDS-H-paniculata_contig16199:1474..1999Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig16199 1475..1999 -
1691480803.9801176-CDS-H-paniculata_contig16199:1474..19991691480803.9801176-CDS-H-paniculata_contig16199:1474..1999Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig16199 1475..1999 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig16199.3568.1

>prot_H-paniculata_contig16199.3568.1 ID=prot_H-paniculata_contig16199.3568.1|Name=mRNA_H-paniculata_contig16199.3568.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=175bp
MYIELSEAYQALPGAVGKLKKAVQAGRCWYNELNNDLKAPGFQSSYAKLC
AYSRIVDRELDILVVAYGYDRLIASKGNEAMDWFVAELESGYKIQDLEEV
SYYIGCPITRNRDAWELKIYQHLYVQTIAVGIVKTSAIPVEAGVKSLLKE
DGPKSPEEEKEMQRFRNRESVRLM*
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mRNA from alignment at H-paniculata_contig16199:887..2320-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig16199.3568.1 ID=mRNA_H-paniculata_contig16199.3568.1|Name=mRNA_H-paniculata_contig16199.3568.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=1434bp|location=Sequence derived from alignment at H-paniculata_contig16199:887..2320- (Halopteris paniculata Hal_grac_a_UBK monoicous)
GCAGAGGAAAAGGAGATAGCCGGCCTCATCGAGAAGGGAGTGTTCGAGCA GGTGGAGCGCCCTCAAGGAAAATTGGTGGTGGGGACCAAGATGCTCTACA GGCGGAAGACCAATGCGAACGGCGAGATTTTGAAATACAATTGTCGCTCC GTCGCCCAGGGCTTGTGCCAGAAACTGGGAGAGCACTACACCGTGTCAGA GTCTCCTACCCCGGCCATGGCCGTCACCCGCATGGCGCCTTCGACCACGG CGATTAACGACATGGAGCTTCGCCACATAAACTTCAAGTAAGCGTTTTTG ACGGCAGACAACGACACCGAGATGTACATCGAGCTGTCGGAGGCGTATCA GGCACTTCCGGGAGCCGTGGGAAAGCTGAAGAAGGCCGTGCAAGCCGGTC GCTGCTGGTACAACGAGCTTAACAACGACCTGAAAGCGCCGGGGTTCCAG TCATCATACGCTAAGCTCTGCGCGTACAGCCGGATCGTGGACAGAGAGTT AGATATACTGGTGGTGGCGTACGGGTACGACCGCCTGATCGCCAGCAAAG GAAATGAGGCCATGGATTGGTTTGTGGCAGAGCTGGAATCGGGGTACAAG ATTCAGGACCTGGAGGAGGTGTCCTATTACATTGGCTGCCCCATCACGCG CAACAGGGACGCATGGGAGCTGAAGATCTACCAGCACCTCTACGTGCAGA CGATAGCCGTCGGGATCGTCAAGACCAGCGCTATCCCCGTAGAGGCAGGG GTCAAATCGCTGTTGAAGGAAGATGGGCCGAAATCCCCGGAGGAGGAGAA GGAGATGCAGCGTTTCCGCAACAGAGAGTCAGTCAGGCTCATGTGAATCG CGACGATGTTGCGGCCCGATATCGCAAATCCTGTCCCCTCCATGGGAACG TTCTGTGAGAAGCTTGGCGTGCAGCACAAAGAAGCGGTGGAGAAGATTCT GCAGTACGTGCTCCAAACGGGAGACAAGGGAACCACCTACGGCAGAAAGC CGTACCACGGGAACGAGATGGTGGCATTTGCCGACTCGAACCACTCTACC TGCCTGGACACTAGGCAGTTGGTATCCGGGGGGGCAGTTATGCTGGGGGG GGGCACGATCAACTGGCTTTCACGCACCCAGGAAACTACGTCGTCGAGTA CCCCGGAGTTGGAGTGCGTGGCGTTGTAGGAGGTTGTGAAGGAAGCGCTT TTCCTCCGCCAAGTGCAGGCGTTCATGGTGCCGACGATCCAGGACTACCC GACAGTCATCAAGGAGGACAACGAGGAGGCGATAAAGATGGCGAACAACA AGCACAGCAGCAGGAGGACGAGACATATCGATGTCAAGCACCATGTTGTA TGTGATGCGGCGGAAGCTGGAATGGTCAAGATCGACTACGTGGGAACGGA AGACCAGCACGCGGATGAACTCACCAAGTCGCTC
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Coding sequence (CDS) from alignment at H-paniculata_contig16199:887..2320-

>mRNA_H-paniculata_contig16199.3568.1 ID=mRNA_H-paniculata_contig16199.3568.1|Name=mRNA_H-paniculata_contig16199.3568.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1050bp|location=Sequence derived from alignment at H-paniculata_contig16199:887..2320- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGTACATCGAGCTGTCGGAGGCGTATCAGGCACTTCCGGGAGCCGTGGG
AAAGCTGAAGAAGGCCGTGCAAGCCGGTCGCTGCTGGTACAACGAGCTTA
ACAACGACCTGAAAGCGCCGGGGTTCCAGTCATCATACGCTAAGCTCTGC
GCGTACAGCCGGATCGTGGACAGAGAGTTAGATATACTGGTGGTGGCGTA
CGGGTACGACCGCCTGATCGCCAGCAAAGGAAATGAGGCCATGGATTGGT
TTGTGGCAGAGCTGGAATCGGGGTACAAGATTCAGGACCTGGAGGAGGTG
TCCTATTACATTGGCTGCCCCATCACGCGCAACAGGGACGCATGGGAGCT
GAAGATCTACCAGCACCTCTACGTGCAGACGATAGCCGTCGGGATCGTCA
AGACCAGCGCTATCCCCGTAGAGGCAGGGGTCAAATCGCTGTTGAAGGAA
GATGGGCCGAAATCCCCGGAGGAGGAGAAGGAGATGCAGCGTTTCCGCAA
CAGAGAGTCAGTCAGGCTCATGTGAATGTACATCGAGCTGTCGGAGGCGT
ATCAGGCACTTCCGGGAGCCGTGGGAAAGCTGAAGAAGGCCGTGCAAGCC
GGTCGCTGCTGGTACAACGAGCTTAACAACGACCTGAAAGCGCCGGGGTT
CCAGTCATCATACGCTAAGCTCTGCGCGTACAGCCGGATCGTGGACAGAG
AGTTAGATATACTGGTGGTGGCGTACGGGTACGACCGCCTGATCGCCAGC
AAAGGAAATGAGGCCATGGATTGGTTTGTGGCAGAGCTGGAATCGGGGTA
CAAGATTCAGGACCTGGAGGAGGTGTCCTATTACATTGGCTGCCCCATCA
CGCGCAACAGGGACGCATGGGAGCTGAAGATCTACCAGCACCTCTACGTG
CAGACGATAGCCGTCGGGATCGTCAAGACCAGCGCTATCCCCGTAGAGGC
AGGGGTCAAATCGCTGTTGAAGGAAGATGGGCCGAAATCCCCGGAGGAGG
AGAAGGAGATGCAGCGTTTCCGCAACAGAGAGTCAGTCAGGCTCATGTGA
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