prot_H-paniculata_contig1618.3560.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig1618.3560.1
Unique Nameprot_H-paniculata_contig1618.3560.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length286
Homology
BLAST of mRNA_H-paniculata_contig1618.3560.1 vs. uniprot
Match: A0A6H5JDR1_9PHAE (MYND-type domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JDR1_9PHAE)

HSP 1 Score: 156 bits (394), Expect = 6.150e-43
Identity = 88/189 (46.56%), Postives = 109/189 (57.67%), Query Frame = 0
Query:    4 TCDASGCHEPATQRCSRCKSVRYCCRECQRQHWTME-HKDSCAYLSTRTAMIHESEILQDTARQQSMDSRTGQSILTILDSIVGSRVIPPEEAPTPAR--ANGWELCPVVNMLGVPLAIKKVSACQCQQCVGCTATQDVPANQIATRLAIEPQTGRAPFRWAGSGTNHLGTVWVARTDGQAFTSKEYAV 189
            TC A GC E  +QRCS CK+ +YC RECQR+ W +  HKD C  L+ +         LQ          R+   I++I D  V + ++  EE PT     A GWELCPVVNMLGVPLAI KV  C C  C+   +    P NQ+ATRLAIEP  G AP +W G   NHLGTV VAR D + FT +++ V
Sbjct:    3 TCAAPGCMELTSQRCSSCKTAKYCSRECQRRDWIVGGHKDRCRELARQRGATDSEAALQ---------GRSTVGIVSIFDQQVSNSIMSLEELPTAGAPGAQGWELCPVVNMLGVPLAIMKVCPCACHICLRGNSQIPEPRNQVATRLAIEPHNGLAPPKWQGGPHNHLGTVAVARMDLRDFTVEDWRV 182          
BLAST of mRNA_H-paniculata_contig1618.3560.1 vs. uniprot
Match: F6HRG0_VITVI (Uncharacterized protein n=4 Tax=Vitis TaxID=3603 RepID=F6HRG0_VITVI)

HSP 1 Score: 59.3 bits (142), Expect = 3.270e-6
Identity = 29/67 (43.28%), Postives = 40/67 (59.70%), Query Frame = 0
Query:    6 DASGCHEPATQRCSRCKSVRYCCRECQRQHWTMEHKDSCAYLSTRTAMIHESEILQDTARQQSMDSR 72
            + + C  PAT RCSRCKSVRYC  +CQ  HW   HK+ C  L T +++      L+D A ++S+  R
Sbjct:   75 ECARCFGPATTRCSRCKSVRYCSGKCQIIHWRQVHKEECQQLETHSSITS----LKDAAIEESVHER 137          
BLAST of mRNA_H-paniculata_contig1618.3560.1 vs. uniprot
Match: A0A5J5VD71_GOSBA (MYND-type domain-containing protein n=4 Tax=Gossypium TaxID=3633 RepID=A0A5J5VD71_GOSBA)

HSP 1 Score: 53.9 bits (128), Expect = 1.300e-5
Identity = 23/42 (54.76%), Postives = 28/42 (66.67%), Query Frame = 0
Query:   10 CHEPATQRCSRCKSVRYCCRECQRQHWTMEHKDSCAYLSTRT 51
            C  PA+++CSRCKSVRYC   CQR  W   HK  C  +ST+T
Sbjct:   66 CSNPASKKCSRCKSVRYCSSACQRVDWKDGHKTKCKEISTQT 107          
BLAST of mRNA_H-paniculata_contig1618.3560.1 vs. uniprot
Match: A0A2K1LAL7_PHYPA (MYND-type domain-containing protein n=2 Tax=Physcomitrium patens TaxID=3218 RepID=A0A2K1LAL7_PHYPA)

HSP 1 Score: 56.2 bits (134), Expect = 1.420e-5
Identity = 23/43 (53.49%), Postives = 29/43 (67.44%), Query Frame = 0
Query:   10 CHEPATQRCSRCKSVRYCCRECQRQHWTMEHKDSCAYLSTRTA 52
            C +P  +RCSRCKS+ YC RECQ +HW+ EHK  C  L   T+
Sbjct:  216 CQKPTKRRCSRCKSISYCSRECQVKHWSEEHKFQCQPLDAGTS 258          
BLAST of mRNA_H-paniculata_contig1618.3560.1 vs. uniprot
Match: UPI00053C9DEC (ubiquitin carboxyl-terminal hydrolase 15-like n=1 Tax=Tarenaya hassleriana TaxID=28532 RepID=UPI00053C9DEC)

HSP 1 Score: 57.0 bits (136), Expect = 1.830e-5
Identity = 25/43 (58.14%), Postives = 28/43 (65.12%), Query Frame = 0
Query:   10 CHEPATQRCSRCKSVRYCCRECQRQHWTMEHKDSCAYLSTRTA 52
            C  PAT RCSRCKSVRYC  +CQ  HW   HKD C  + T +A
Sbjct:   80 CFSPATTRCSRCKSVRYCSGKCQIIHWRQAHKDECVPVETCSA 122          
BLAST of mRNA_H-paniculata_contig1618.3560.1 vs. uniprot
Match: A0A6N2NAV1_SALVM (Uncharacterized protein n=1 Tax=Salix viminalis TaxID=40686 RepID=A0A6N2NAV1_SALVM)

HSP 1 Score: 56.6 bits (135), Expect = 2.280e-5
Identity = 23/43 (53.49%), Postives = 28/43 (65.12%), Query Frame = 0
Query:   10 CHEPATQRCSRCKSVRYCCRECQRQHWTMEHKDSCAYLSTRTA 52
            C  PAT RCSRCKSVRYC  +CQ  HW   HK+ C  + T ++
Sbjct:   86 CFRPATTRCSRCKSVRYCSGKCQINHWRQVHKEECQQMETTSS 128          
BLAST of mRNA_H-paniculata_contig1618.3560.1 vs. uniprot
Match: A0A834ZKE3_9MAGN (Uncharacterized protein n=1 Tax=Tetracentron sinense TaxID=13715 RepID=A0A834ZKE3_9MAGN)

HSP 1 Score: 56.6 bits (135), Expect = 2.340e-5
Identity = 31/82 (37.80%), Postives = 38/82 (46.34%), Query Frame = 0
Query:    6 DASGCHEPATQRCSRCKSVRYCCRECQRQHWTMEHKDSCAYLSTRTA-----------MIHESEILQDTARQQSMDSRTGQS 76
            + + C  PAT RCSRCKSVRYC  +CQ  HW   HK  C  L T  +             HE  +L D+   Q  +    QS
Sbjct:   75 ECARCFGPATTRCSRCKSVRYCSGKCQIIHWRHSHKQECQQLETTCSNSSSESASIDESFHERVLLNDSMNSQFFEYNVKQS 156          
BLAST of mRNA_H-paniculata_contig1618.3560.1 vs. uniprot
Match: A0A5N5KVM3_9ROSI (Uncharacterized protein n=3 Tax=Salix TaxID=40685 RepID=A0A5N5KVM3_9ROSI)

HSP 1 Score: 56.6 bits (135), Expect = 2.350e-5
Identity = 23/43 (53.49%), Postives = 28/43 (65.12%), Query Frame = 0
Query:   10 CHEPATQRCSRCKSVRYCCRECQRQHWTMEHKDSCAYLSTRTA 52
            C  PAT RCSRCKSVRYC  +CQ  HW   HK+ C  + T ++
Sbjct:   79 CFSPATTRCSRCKSVRYCSGKCQINHWRQVHKEECQQMETTSS 121          
BLAST of mRNA_H-paniculata_contig1618.3560.1 vs. uniprot
Match: A0A836Y1P2_9ROSI (GLUCAN SYNTHASE family protein n=1 Tax=Salix suchowensis TaxID=1278906 RepID=A0A836Y1P2_9ROSI)

HSP 1 Score: 56.6 bits (135), Expect = 2.430e-5
Identity = 23/43 (53.49%), Postives = 28/43 (65.12%), Query Frame = 0
Query:   10 CHEPATQRCSRCKSVRYCCRECQRQHWTMEHKDSCAYLSTRTA 52
            C  PAT RCSRCKSVRYC  +CQ  HW   HK+ C  + T ++
Sbjct:   79 CFSPATTRCSRCKSVRYCSGKCQINHWRQVHKEECQQMETTSS 121          
BLAST of mRNA_H-paniculata_contig1618.3560.1 vs. uniprot
Match: A0A803NAP4_CHEQI (Uncharacterized protein n=4 Tax=Chenopodium quinoa TaxID=63459 RepID=A0A803NAP4_CHEQI)

HSP 1 Score: 56.6 bits (135), Expect = 2.460e-5
Identity = 23/39 (58.97%), Postives = 26/39 (66.67%), Query Frame = 0
Query:    6 DASGCHEPATQRCSRCKSVRYCCRECQRQHWTMEHKDSC 44
            + + CH PAT RCSRCKSVRYC   CQ  HW   HK+ C
Sbjct:  123 ECARCHSPATTRCSRCKSVRYCSGRCQIIHWRQGHKEQC 161          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig1618.3560.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 23
Match NameE-valueIdentityDescription
A0A6H5JDR1_9PHAE6.150e-4346.56MYND-type domain-containing protein n=2 Tax=Ectoca... [more]
F6HRG0_VITVI3.270e-643.28Uncharacterized protein n=4 Tax=Vitis TaxID=3603 R... [more]
A0A5J5VD71_GOSBA1.300e-554.76MYND-type domain-containing protein n=4 Tax=Gossyp... [more]
A0A2K1LAL7_PHYPA1.420e-553.49MYND-type domain-containing protein n=2 Tax=Physco... [more]
UPI00053C9DEC1.830e-558.14ubiquitin carboxyl-terminal hydrolase 15-like n=1 ... [more]
A0A6N2NAV1_SALVM2.280e-553.49Uncharacterized protein n=1 Tax=Salix viminalis Ta... [more]
A0A834ZKE3_9MAGN2.340e-537.80Uncharacterized protein n=1 Tax=Tetracentron sinen... [more]
A0A5N5KVM3_9ROSI2.350e-553.49Uncharacterized protein n=3 Tax=Salix TaxID=40685 ... [more]
A0A836Y1P2_9ROSI2.430e-553.49GLUCAN SYNTHASE family protein n=1 Tax=Salix sucho... [more]
A0A803NAP4_CHEQI2.460e-558.97Uncharacterized protein n=4 Tax=Chenopodium quinoa... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.30.60.180coord: 1..48
e-value: 2.7E-10
score: 41.8
NoneNo IPR availablePANTHERPTHR24006:SF752UBIQUITIN CARBOXYL-TERMINAL HYDROLASE 17coord: 8..80
NoneNo IPR availablePANTHERPTHR24006FAMILY NOT NAMEDcoord: 8..80
NoneNo IPR availableSUPERFAMILY144232HIT/MYND zinc finger-likecoord: 9..49
IPR002893Zinc finger, MYND-typePFAMPF01753zf-MYNDcoord: 9..44
e-value: 1.0E-8
score: 35.1
IPR002893Zinc finger, MYND-typePROSITEPS01360ZF_MYND_1coord: 5..44
IPR002893Zinc finger, MYND-typePROSITEPS50865ZF_MYND_2coord: 5..44
score: 11.378

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig1618contigH-paniculata_contig1618:4755..10984 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig1618.3560.1mRNA_H-paniculata_contig1618.3560.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig1618 4052..17477 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig1618.3560.1 ID=prot_H-paniculata_contig1618.3560.1|Name=mRNA_H-paniculata_contig1618.3560.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=286bp
MSATCDASGCHEPATQRCSRCKSVRYCCRECQRQHWTMEHKDSCAYLSTR
TAMIHESEILQDTARQQSMDSRTGQSILTILDSIVGSRVIPPEEAPTPAR
ANGWELCPVVNMLGVPLAIKKVSACQCQQCVGCTATQDVPANQIATRLAI
EPQTGRAPFRWAGSGTNHLGTVWVARTDGQAFTSKEYAVNPGRVHFQQHL
RCLGLGSPRPRQDAAQRVQQAGVLALLRQQDVRRRHACRLLKHLQTHQNL
EIGIVRRSTVVGSWWRCGRDWGGVHYVDRNRNWGK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002893Znf_MYND