mRNA_H-paniculata_contig1618.3560.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig1618.3560.1
Unique NamemRNA_H-paniculata_contig1618.3560.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
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BLAST of mRNA_H-paniculata_contig1618.3560.1 vs. uniprot
Match: A0A6H5JDR1_9PHAE (MYND-type domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JDR1_9PHAE)

HSP 1 Score: 156 bits (395), Expect = 6.040e-39
Identity = 88/189 (46.56%), Postives = 109/189 (57.67%), Query Frame = 2 
Query:  713 TCDASGCHEPATQRCSRCKSVRYCCRECQRQHWTME-HKDSCAYLSTRTAMIHESEILQDTARQQSMDSRTGQSILTILDSIVGSRVIPPEEAPTPAR--ANGWELCPVVNMLGVPLAIKKVSACQCQQCVGCTATQDVPANQIATRLAIEPQTGRAPFRWAGSGTNHLGTVWVARTDGQAFTSKEYAV 1270
            TC A GC E  +QRCS CK+ +YC RECQR+ W +  HKD C  L+ +         LQ          R+   I++I D  V + ++  EE PT     A GWELCPVVNMLGVPLAI KV  C C  C+   +    P NQ+ATRLAIEP  G AP +W G   NHLGTV VAR D + FT +++ V
Sbjct:    3 TCAAPGCMELTSQRCSSCKTAKYCSRECQRRDWIVGGHKDRCRELARQRGATDSEAALQ---------GRSTVGIVSIFDQQVSNSIMSLEELPTAGAPGAQGWELCPVVNMLGVPLAIMKVCPCACHICLRGNSQIPEPRNQVATRLAIEPHNGLAPPKWQGGPHNHLGTVAVARMDLRDFTVEDWRV 182
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BLAST of mRNA_H-paniculata_contig1618.3560.1 vs. uniprot
Match: D7FQD2_ECTSI (Hypothetical leucine rich repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQD2_ECTSI)

HSP 1 Score: 127 bits (320), Expect = 2.960e-27
Identity = 92/247 (37.25%), Postives = 120/247 (48.58%), Query Frame = 2 
Query: 4880 SGIAYLSFLPSLEHLNLARCCQIGDEAAAALGRGNCSDSLRWLDLSGTATTDDGVSSLHHTKLLEFISLSSTTVSLALVNALARDLNLPAALPDAPKMHARSNRTLLMGSRWSRRQSGFAPRRLPHSTRNTAGSLRYGHGTSKRGWEG-----------GPSKLLRIGTGVGVGDCQVGGSRKRPVLAGEPVVQK-VQVGFGDGEGGDXXXXXXXXXXXXXXXXXGRELLVELVNGIVRLWPAVPVR 5584
            SG+AY+++LP+LE L LAR C + D A  A+  G C  SLRWLDL+ TA +    +SL   + LE             V ALARDL LPA LP+APK  ARS+R LL+GS+WS  Q    P++   +T  TA       G   + W             GPSK +R+          +G + +    +  P     V+VGF D                      GR+LL+ LV GIVRLWPAVP R
Sbjct:  207 SGVAYIAYLPALEQLCLAR-CNVSDAAVVAITTGVCRQSLRWLDLTCTAISAAAAASLRDLQRLEXXXXXXXXXXXXXVAALARDLRLPAFLPEAPKTRARSSRALLLGSKWSETQLRSLPKKRAATTAATAA------GAPAKSWRNSIASVICYERDGPSKAMRL----------IGAASRVSSSSSSPCADDLVEVGFRD----------------DGIEEGGRKLLLNLVQGIVRLWPAVPSR 420
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BLAST of mRNA_H-paniculata_contig1618.3560.1 vs. uniprot
Match: F6HRG0_VITVI (Uncharacterized protein n=4 Tax=Vitis TaxID=3603 RepID=F6HRG0_VITVI)

HSP 1 Score: 60.1 bits (144), Expect = 6.450e-5
Identity = 31/78 (39.74%), Postives = 42/78 (53.85%), Query Frame = 2 
Query:  686 PTA*QKMSATCDASGCHEPATQRCSRCKSVRYCCRECQRQHWTMEHKDSCAYLSTRTAMIHESEILQDTARQQSMDSR 919
            P      S   + + C  PAT RCSRCKSVRYC  +CQ  HW   HK+ C  L T +++      L+D A ++S+  R
Sbjct:   64 PLVSSSKSGNHECARCFGPATTRCSRCKSVRYCSGKCQIIHWRQVHKEECQQLETHSSITS----LKDAAIEESVHER 137
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig1618.3560.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5JDR1_9PHAE6.040e-3946.56MYND-type domain-containing protein n=2 Tax=Ectoca... [more]
D7FQD2_ECTSI2.960e-2737.25Hypothetical leucine rich repeat protein n=1 Tax=E... [more]
F6HRG0_VITVI6.450e-539.74Uncharacterized protein n=4 Tax=Vitis TaxID=3603 R... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig1618contigH-paniculata_contig1618:4052..17477 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeViridiplantae
Seed ortholog score61.2
Seed ortholog evalue8.9e-07
Seed eggNOG ortholog29760.VIT_19s0140g00200.t01
Preferred nameUBP15
KEGG koko:K11855
Hectar predicted targeting categoryother localisation
EggNOG free text desc.Ubiquitin carboxyl-terminal hydrolase
EggNOG OGs37PZG@33090,3GBVJ@35493,KOG1865@1,KOG1865@2759
Ec32 ortholog descriptionZinc finger, MYND-type
Ec32 orthologEc-01_006560.1
EC3.4.19.12
COG Functional cat.O
Best tax levelStreptophyta
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000,ko01002,ko04121
Exons6
Model size6819
Cds size858
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig1618.3560.1prot_H-paniculata_contig1618.3560.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig1618 4755..10984 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929291.9215236-UTR-H-paniculata_contig1618:4051..47541622929291.9215236-UTR-H-paniculata_contig1618:4051..4754Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig1618 4052..4754 +
1691480803.6184545-UTR-H-paniculata_contig1618:4051..47541691480803.6184545-UTR-H-paniculata_contig1618:4051..4754Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig1618 4052..4754 +
1622929292.0284011-UTR-H-paniculata_contig1618:10984..143681622929292.0284011-UTR-H-paniculata_contig1618:10984..14368Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig1618 10985..14368 +
1691480803.6673288-UTR-H-paniculata_contig1618:10984..143681691480803.6673288-UTR-H-paniculata_contig1618:10984..14368Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig1618 10985..14368 +
1622929292.0478985-UTR-H-paniculata_contig1618:15603..174771622929292.0478985-UTR-H-paniculata_contig1618:15603..17477Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig1618 15604..17477 +
1691480803.675012-UTR-H-paniculata_contig1618:15603..174771691480803.675012-UTR-H-paniculata_contig1618:15603..17477Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig1618 15604..17477 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929291.9359481-CDS-H-paniculata_contig1618:4754..48191622929291.9359481-CDS-H-paniculata_contig1618:4754..4819Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1618 4755..4819 +
1691480803.6285145-CDS-H-paniculata_contig1618:4754..48191691480803.6285145-CDS-H-paniculata_contig1618:4754..4819Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1618 4755..4819 +
1622929291.9473794-CDS-H-paniculata_contig1618:5598..57391622929291.9473794-CDS-H-paniculata_contig1618:5598..5739Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1618 5599..5739 +
1691480803.636592-CDS-H-paniculata_contig1618:5598..57391691480803.636592-CDS-H-paniculata_contig1618:5598..5739Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1618 5599..5739 +
1622929291.971135-CDS-H-paniculata_contig1618:8207..84331622929291.971135-CDS-H-paniculata_contig1618:8207..8433Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1618 8208..8433 +
1691480803.644437-CDS-H-paniculata_contig1618:8207..84331691480803.644437-CDS-H-paniculata_contig1618:8207..8433Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1618 8208..8433 +
1622929291.9929206-CDS-H-paniculata_contig1618:9741..98771622929291.9929206-CDS-H-paniculata_contig1618:9741..9877Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1618 9742..9877 +
1691480803.65217-CDS-H-paniculata_contig1618:9741..98771691480803.65217-CDS-H-paniculata_contig1618:9741..9877Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1618 9742..9877 +
1622929292.0132322-CDS-H-paniculata_contig1618:10694..109841622929292.0132322-CDS-H-paniculata_contig1618:10694..10984Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1618 10695..10984 +
1691480803.6597824-CDS-H-paniculata_contig1618:10694..109841691480803.6597824-CDS-H-paniculata_contig1618:10694..10984Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1618 10695..10984 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig1618.3560.1

>prot_H-paniculata_contig1618.3560.1 ID=prot_H-paniculata_contig1618.3560.1|Name=mRNA_H-paniculata_contig1618.3560.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=286bp
MSATCDASGCHEPATQRCSRCKSVRYCCRECQRQHWTMEHKDSCAYLSTR
TAMIHESEILQDTARQQSMDSRTGQSILTILDSIVGSRVIPPEEAPTPAR
ANGWELCPVVNMLGVPLAIKKVSACQCQQCVGCTATQDVPANQIATRLAI
EPQTGRAPFRWAGSGTNHLGTVWVARTDGQAFTSKEYAVNPGRVHFQQHL
RCLGLGSPRPRQDAAQRVQQAGVLALLRQQDVRRRHACRLLKHLQTHQNL
EIGIVRRSTVVGSWWRCGRDWGGVHYVDRNRNWGK*
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mRNA from alignment at H-paniculata_contig1618:4052..17477+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig1618.3560.1 ID=mRNA_H-paniculata_contig1618.3560.1|Name=mRNA_H-paniculata_contig1618.3560.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=13426bp|location=Sequence derived from alignment at H-paniculata_contig1618:4052..17477+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
TCACGGGTCAGCCCAGGATGCCCGAACGTGGCCCGTTCCTGCGGCTTGAA
GCTACGAAACCCCTGCCACGCAGATGTTCTGCAGCCTGAGCAATCGAGGT
TTCGCCGACGATGGAGCTCTTGTGTCTGCTCCCACTGCCCGTTCTCTCGA
CGATGCCGTCCCCGGCGTCTTATGCTGAGAGCTCAACTCCACGAGATAAA
GGGACGTCTATCTCCTTCCCAACTATTTTTACCGTCGGGATAAGGGAATC
CGGAACAGGGGGTTGTGGTGTGGTGTGGGTGCGCGTCAACATCTAATGCA
CAGAGTCGCAGCCCATAAAATTCAAAAATTCAAACGAAGAAATCGGATTC
AGTGCAAGGGGCCTGGGCAGGGCCGAACCCAAGAGTGCTGGGGCAATGGA
GTGATGTGATGCAGAAAAAACCAAGCCGACCGCATAGATCGAGGTTAATC
TTTTACCTATGCTGTACCCCCCGACTACTGAGTACCAAGAAGAGATGGCA
CAGTAAAAGTAACGGCAATAACAACAGCAGCAACGCAATCTCTCTCCCTG
TTCATGTGTGTGCTCCGTCGACTTGTCTCCCACCATCAAGAAACTGGACC
CCTATTTCGGTATATTGTAGCATTCCCCAAAACCAATCTGATCCCGTTAT
ACTTGTAGGCATGGGTCATTCACTCCACACCTTCACCAACAGCATAGCAG
AAAATGAGTGCGACATGTGATGCATCCGGTTGCCATGAGCCTGCTACACA
ACGGTGCTCTCGCTGCAAGTGAGTGGATGAACCACAGAATTGCGTCTCCG
ACTTGCGCTGTCTGTCAACTCTTATAGCTCTGTATAGAAGTAACAGTGCT
CAACAGAACAAAGTACGAGTACTTGCACAGGATTGCTGAAGTGCGACCAT
GTCAGCGCGCGTGTGTGTTCGACCAGTCAAGGAGTTTCAGCTGGGGTGTG
TTTTATTTTGTACAGCCGGCATTTTACCACAGTTGATCTGCAGTGTATAT
GTATGTCTATCTCCCTCTCGTTTTCCCTCTCTGTCTGCTTTTGTTTCTCT
TTGATGGACCTGGTCTGGACATTGGTGATGATATGATCTTACCGTCGTTT
GCTCTCTCTGTCTGGATATATCCTGACCTCGACCGTGGACAGCTCCCAGG
ATTGTTGGTGGTGGATGACTACTGCTGCAAACATATGTTATGACTGTCGT
ATTATTTATATTTTCTGTGCCGTGTATATGAGATGCCCTGCGCTCCCGAA
GTCTCTTGAGTGCTATTTCATCTGCTGAATGCAAACCGTCTGTCGCTCGA
TTCTCTAACCATCCTCACACAGAGCAGTGTAAACCACGGTGAACACCTCA
AATTACCGTTATCCCTGTTCCATTAAAATACCCCCGCGCCCATGCGCTGC
ACCGACCATTCAATGTTTGACCGCTACCGAAAACCGTACTCCGTCTTCAG
GTTGCCCCGATTTGCCTCCAACGATTCTTACATAAAACACTGCATTACGC
CCCCCTCCGTTGTTGTGTGGCATTGCGTCTCATCGGGACATACGAAGATC
TGTGCGATACTGTTGCCGCGAGTGTCAGCGGCAGCATTGGACGATGGAGC
ACAAGGACAGCTGTGCTTATCTCAGCACTCGTACGGCAATGATACATGAG
AGCGAGATACTGCAAGATACCGCACGCCAACAGAGCATGTGGGTGAACAT
GTTGACCCCTCCTTGTCCCTGTAACAACAAACACAGACTTGTCTGTGGCG
ATTCTACCAGCAACTTGATTTGCAAGATTGTTTTCGCTTGTTTTATGTTT
TTTGTCTGTTTCTTTAGTCTCGGTCGAGCTGCAGCAGTATACAGTACAGC
ATCCTCTTTGTTGGTGTCAAGCACATACTGTGTCATCCACACCGAGTTCT
TGGGAGCCCCCCTCCCCATTTCTTCTTTATATTTTAACTGATGAATGTAC
GCAGCTTTGATTTCAGCTAGACTGCATAACTTCAGCACGCGTACAACAGA
CTTGCTGTGTCTGCCACCCCGTTCACTTCTACCGGCCTGAAACGCGGCCA
TACATCGCACTGACGGTTGAAGTAGGGCACAAGAACTTGCGAACTTTCTA
TTTTATGGACGCTCGAGTCCGTTTCTTTTATAGGCATCGAGATCTTGACC
TTTTTTGGCTGTAGGATTTCACGCAGTACCATGTATCTACCCATCTTGTT
TTACTTTTGTAAAAATCAGGTTTCGAAAGCACAACTCGAACGCCAGCAGC
TGACAGACGGCTTTATCAGGACTAGGTTTTTTGTTTTTTTTCCTGCGGGC
CGTGGTCGCACACGACTGAGAGTCTAAGTTTTCAATTTTGTATGCAGCTG
TCAACCGATGAGAATAAGACATAAATGGTCCGCACTGATCGGGATACCCG
GCGCGCAGTTCGCTCGTTGTAAGCTGAAGGGCGCTTTGTTGCCTTGTACC
AACATAGAAAAGTTCTTCAGTTTAGGAGAGGATGCGAAGAACACTCCCCC
TTTGCCTACCGTCCGTGTCCATCGAGCGTCAAACGACGTGGTACATACAC
TCATGTACGTCTCTCCAAAACGTAACAAAACCGAAAACGAGAGCGAACAA
AAACGTTTCGGTTTTCGCTTCCCCAGGTGTGTTCGGAGGGCCGCAGCAAA
AAGCGTGGTAAGCAAAAAACTGACAACCCCCGCACAGGAAGACACTGGCC
CCAACACCACCGTCTCGAATATTGGCGTGAAAGTTCCCGTGCCTCCAAAA
CCACTCTTCTTGATAGCCCAAAATGTGACCCTTGGTCAGCCATGCCGTGT
GCTTCGTTTCGATTTTGAGTGTGTCAAGAACTGAAAGGGCAATGCTACTA
GTATGTGTCGAGGTGTTAAGCATCTAGTGGGACTGTCTATTGGGAGAATC
TGAGATTCCTGCTGTACGCGATGAAAGGTAAGGCACACATTTTTCACCGC
ACCTTCGTCACAATGTCACAGTTGTGAACAAAAAATAACGTGGCGCTGAT
CGATTCGCCTTAATTTTTCGTTCTCGAGATTGACTTGGAGTTAGAGGAGC
TTCCCCGAACAGAAAAATGAGTTTGGTGTTTTTCATACCCCGTGCGGATT
AGTCATAGCCGAGTTTATTTTCATTTTTAGAGCCGTTATATTTCGCAAAA
TGAGTTCTATTTCAATACCGTGAAACAACTATGAACAGAGTATATAAGTT
TCGCTCGCTGACACCACAGATGCACGTCTCGGCATCCCAAGGGAAACTCC
GTTAGCGTGGGCCCACTTGAAAATGCTGAGATACTGCCACTTTTCACCTG
TAGCCGCCGCGTGTTGGTTAACATCAAACCTGGTCGGAGGTAGCTACTGG
GACATATATATCGACGTGACGACCTGCTGCCACCGTGCAGGTGCCTATCG
TCAAGTGGGCAGCCAATATCTTGCGCTTGCTTCTTTGTGGTGGAAACTCG
CAGCAACGACGGACAGGGTATTCCGCTCCCAGTCCTCAGGCCAGGCTACC
TGAAAACAAAACCGTGACTCGTTCTCGAGGATGGCCACATCGCCCTATTC
GACAGCACATTGAAGTGCCAAGTCATCGTTCGCAGACGTCTCTTTCTCTA
GATACTTGATGGCATCAACGTGTCCAACGTCCGCGGCAGAAATATAGTAC
AGTTGTCTCTCGCGTGCTGTTGAATTGAAAATGGCAACCGAATGGCCATA
TCCTGATCCAGCATGAATTACCGGGCGCGCTGCAACCCGCGCAGGTGTCC
CGCAAGGATAGTGTTGTTTCCCGATCAGTGCTGGCCGAATTCTGCAGCCC
GAAGCCAGTTTTCCTCACCCTAGCATGGAGTGAGCAGCTTGATGCGGCCA
TGTATATACTACCATTGTGGCGCAGGGTAATCGCAGCGTGCGGTAAGCGC
CTCATTTGACCATAAACCGTACCCTCTGGTGCCCGCTCTTCCGTCGTGCG
GGAGAAGGCGGTAACCCGCATATTGCAGCCCTTAAGTACAAGCACTACCG
GAAGAATTTTTTCGATTACCCGCCGTGTGGTGTGTCGAGATTTTCGAACC
AAAAATCCTGCATTTGTACCGGATCCGTGTCGCTCATACATGTTGCAATT
GACTCTGTTTTAATCCCATGTTTTTTCTCTTTTATCGTTGTGTCGGGCAA
TGGCAGGGACTCGCGTACAGGACAGAGCATACTGACGATACTCGACTCCA
TTGTCGGGTCGCGCGTTATTCCGCCGGAAGAAGCCCCGACACCGGCAAGG
GCAAACGGTTGGGAGCTGTGCCCTGTTGTCAACATGCTCGGTGTCCCGCT
TGCTATCAAGAAGGTTTCCGCCTGCCAATGCCAGCAATGTGTGGGGTGCA
CGGCAACCCAAGACGTACCTGCGAACCAGATTGTGAGTTTTCGTTTTCGG
GCCGATTACAGCTCCCCTTGAACAACTGTATTTCTTATGACAATCGATGC
AGCGTTGGTAGCGCATAAAGCTGAACGTTGGACTCGTTCAGATTTGTATC
CTGAGGTTGAAGTAGCCTATAATGCGGTGTTTGGTCGCTATGTATTTTGT
TTGACTTCCCCTCATGTACGTTGAACAACTGTATTTCTTATGACAATCGA
TGCAGCGTTGGTAGCGCGTAAAGCTGAACGTCGGACTCGTGCAGATTTGT
ATCCTGAGGTTGAAGTACCTTGTAATGCGGTGTTTGGCCGCTATGTATTT
TGTTCTACTTCCCCTCATGTACGTTTACACGGCTTCCCCCTTTGACTTGA
CAGTCGCAGGCGTGCCGTAGGAATCAAGATGTTTGAATGTTCCTTCTGCC
GTTATATATTCATTGATCTCTCCACACCCCTAAAACATCGGGGACAACAC
TATTCAATCTTATCACATGAACCGTTTCTATTGAATTCCTAGATCGTCAA
CTATAGTGCTACTCGAATCAGAGTACACAGTAGAGTGCGAAATCGAAGAC
ATTTTGTCACTAGAGTAGCGAGCTTCCGCGTCGAGAGCACCGTGGATCAT
GCACTCGAGTGTGTTGGAAGGAAACCACTGAGCAGGAATAATGTTCTCTC
CCCACTATAGCGGCGGATGGTCATTGAATGCCAAATCAAGCGTTGAAAAT
ATAGTCTAGAGCGATCTTATACAGCGAGTGTTTGCTTCGTGCCTTTTCAG
ACATCGATCATCCCGCAAAATGTTATCCTAACACTGTATATGACAGACGG
CCTTACATCACATTGGCACCCGAACGAGTCTAGCACGACTTGTCAATGCG
ATCATGTGGAATAACACGTACGTGGCGTAGAACTAGACACAGGAGAAGGC
ATGGGCGGTCAAGCAAACGTTGTGTCTTGGCTGTCTTGTACGTGCTGTTG
GTGTTCTGTACAAAGCTGTGTATGTATACTCTTCCTTTTATTGACAGATG
CATCTGGGAAACTTGATACCTCTTGCACGGTTTATGGCGTTTCACCGTGT
TGGTCGTACTACCTGGTACGGTTACCACTCACGGCACCACGTAAAGTACG
CGGGACTCTCCAGCTATCTGTACAGCCTTATTAGTAGTGACTTCAATATT
TCTGCATGTCTCCACTGTTTTCACTGCATTCAGTATGTAGGATGATGGCA
TGAGCAACGACCAAAGTAATAGCCAGGCTACAAGTAGTACTCCGTATCTC
ACTCAGTCCACGCGTTTTTTTTTTTGTCATTTTCCCTTAGGCTACTCGTC
TAGCGATCGAGCCGCAGACTGGTCGGGCACCATTCAGATGGGCGGGTAGC
GGTACTAATCACCTTGGCACCGTGTGGGTGGCGCGGACCGACGGTCAAGC
CTTCACCTCGAAAGAGTATGCTGTAAGTGCGTCCTTGTACTGTAGCAGTT
ATTAGGGCTTACACGTTCGTGGTTGTCGAAGCTGTCATGGCGTTGGACAT
GTTGCGCTTGTCGAGGAGAGCGATTAGGTGAACGTATTGGAAGGGGGGGG
GGGAATTGAGACCATGTGAGAAGGTCTTCGTAGCATGCACACGAGTTTTT
TGTGTGCCTGTGCGTTTATTTACACCCGATCATTGTGGTGGCAGGGCTCA
GGGCTATTGGTTTAATATCCCCGCGCAGATGCTTCCAAGTCAACCTGTCT
AAGGAAGACAACTAACCGTTCGAATTTGACCGCCGAAAAAAGCAGAGCTG
TGACAAGGTAATACATTACGTTTTCTTTTCCCATTAGACATCCAGAACTT
CGGCGCCACTCGTGGGTACTCGGTTATTGATTAGATACGTTATCAATGTA
TTCGACATCGTACAAGCCACAAGGTGTTTTGTTTGTTGTTCGCGTCGTTG
TCGCACAAGGATACTGCTGAAGCGGCGACACCAATTTTACGACCAAGCAA
TGTAGACGTTCTGCACCTATGTCCGTATCTGCAGGACAAAGGCTGCTCTT
GTATATTTGTAATTCAATCGTTCCGCGAGCGATTAGATTTCGTGTAAATC
TATACCCATGTATGTACGCCCTCTCACCGTAACCTCTTGGAGACAATACC
GTGGTGAAGGCGCACCACAGCACTACAGCGAATCCATCTTGTGATCACGG
TCAGCCTATACCTGTTCTCAGTAGCTTGTCTCAACGTGCTGTACACCCGC
TATTCGGCACTTTCGCGTTTTCCCCAATGGTCACAAAACGCAGATCCTGG
ACGAGTACATTTTCAACAACATCTTCGATGTTTGGGGCTTGGATCCCCCC
GACCGCGACAGGATGCTGCCCAGCGTGTACAACAGGCAGGCGTACTCGCG
CTACTTCGCCAGCAGGATGTCCGAAGACGGCATGCGTGCCGGCTTTTGAA
GCATCTGCAAACTCACCAAAATCTAGAAATTGGTATTGTGCGCCGTTCAA
CAGTAGTTGGGTCATGGTGGCGCTGTGGGAGAGATTGGGGGGGGGTTCAT
TATGTCGACAGGAACAGGAATTGGGGGAAATAATGGCCGGTAAAGCTTCT
GTTTCCATCAACTGAGCGCACAAATAGGTTGTTTTTGCATTTGACGTTTT
GCGACGGCTTACGGGGATGCATTCATTTCATATACATCCTTTTTAAAGGG
AGGGTGCGGTTGACGTTACGCCTCCGTTCAAAGGTTCTTATTTTTTTTTG
CAGCATCAACTGTGGTGTGGGGGTATTGATAGTGTTCCACCTCATTCCCG
GTGAACGAGGCTAGGGTAAATGATACCTCTCTCGTTCCGGGGGTATGTTT
AGCTTGGAGTTTCTCGATTCTCACCACACTCTCACATTCACATTGTGCGC
CAATGCCTATTATAATTACAATTTGGGCAACAAGATTAGGATTTTTTTTT
CATGCTTTCGCTGGAAGCTAGTGTTGAAAAAAGACGACGAGCTGTTCGAG
GGGAAATTTTTAAGGAGAGGAAAATTGCTGGCGTGAGGAGGTGGTGCGTG
TATTCAAAGGCTAGCCCTAGGACGTGTAACGTAGATAGAAAGTAGAAAGT
AGAAATAGCGTAGAAGCGTTTTGTCCCACCAGTTTTTCAGCAGTTTTGCC
CAGTGTCTGCACCTAGGCTGAGATCACCAATCCCTCTGGGTGGGACTTTA
TTCGTTTGTGTTTGTGTTCGTGATGTTGCCCAGGTAGTAACTTCGTCGAG
GCGCAATTCGTACTCTTCGGTATATATATATATATGGTGGTGTAAGCGAA
GCCGCATACACAGGGCAAAGTCGGATACACATGTGCGTTGCCTTTGTCCA
CTTGATGTCCACTTGACGTCCACTTGGTGAGAGTTGTACGTTTCGATGAC
CCAGATTATATTGTCAAAGAAGTCTTAATTTTTAGTAGTAGTGGTTGTGT
ACAGCTTTGAGCGAACTGTTGGCCGATGGGATCTGCATTCTTTTGTACGC
GCAACATCATCTGACCATATTTTTTTATGAGCAGTTAACCGCTCTGTGTG
CGTGAGGTTTTCGTGCTATCGGGAGATGAACAATACAAGTGGTGCATGGG
TTATTAATAGGGTAATTTTGTTGGGATCTTCAATTCCGCGTTTTGTGTAC
AATGCTGGTGGTGGCCTGGATGGATGTTCAAGAACCCTTTTCTTGATTCA
TGTAGGTTGATTGTATAGTATTAATAGTGGAACTTACGGGTTTTGTGCAG
CTTTTTCATCACCATTTTGCGACCAACGGGACTACTCAGCAATCTAATTT
TGATGAGAAAAATATGTTTTTGACTAACCGCATGAGGTGTCTCAATTACA
CGTACCAGTAGCACAAACGTGCAAAACCGACAGCCAGCGCACCTACTAGC
CAGGTGGCACGTCGGCAATCGATGTCGGAATGGTTTCCTCCAGATATTAT
CTCTCGAACGAGACATGAGGGTTATCTCAGCTGCACGCGGGTCGAAGATG
CAGGTGATGTTTCACTTTCATACCTCTGTCTTAGATCCCTCGAGAGCTCC
CTCGGGAAAGGTTTGGCATCACTTTCCTTGCAGGGTCTGCCTCTTGGCCT
AGCCGAGAAGATATATAGATACGTCGCCGAGAGAGGTTCGCGTATGGCTC
AGATGGAGGTTTCCCGTGCCCTGGCTCCCCTGCTGTCACGAACGGTGATA
TGCCTTGATTTCACTAACTCGGAAACGGAACATCAATCGTCGTGCAGTGG
TGGTAGCAGCTGTGGTTACAGTAACGGCTTCATCGGGGAATCTGCGCTGT
TAGAACTTGCTAACGGGTGCGGCATGGGGTTGATCCACCTAGATCTCGGT
GGTTGTCGGTTGGTGAAGAATGCTGGCGTGCTGGCGGTGCTGGCTAGGTG
TCAGAATCTGTCGTCGCTTGGATTGTCAGGACTTGATGGTGTCAGCGACC
AGGTAGGTTCAACTCAAACACTAGTCACGTCACCAACAGCAGCTGGAGTG
TGGAGCAGCACATCGTAATTATTTTTGTGCATCACATCGGATCACTCTAG
AATTTTTTGTGCTAGAACACTGCCCAGTTGTCTTTGAGTCTATCTGATGT
TTTTTTTGGCCGTGCAAGCAAACGGTCATTGTGGTGCAGCTCCCCCCAGC
CCAGAACTCACGCTCAGTTGTCACGATGTACTTGTAGTCTTCGGAAGAGT
TTTGCGTTAGTTTATTACGAAGATCATGAGAATGTATCTAGCGGTGTGTG
TAGGAGGTGTCGAAGGCGTATCCTGCAATGGATGTCCCGTTCAGATGCAT
TCATCGGTTGTGCATTCTTTCGCTATTCCCTTCCCCCCCCTCCCTCAATG
TCTGTTATCCTCGATGAGGAGGAGTGGCGCTGGTGATATTATTATTTGGC
TCAGAATCAGGACACAAATTGCATGTCGTCGCAACTTCAATTTGTTCTTG
GGTGTCTTTCCATAATCTGCAAGTTCGTGACGCAACACAAAACCGGAATC
AACCCTTTTCACAAAAAACACAAGGCCTGCTATGTACAAGCGTTCTTTGC
GTTCTGGCACAAAGTCTGACCATCCTGACCTTAGCGGTTTTTCAAACTTG
CCAGTCGAGTCGCTGCATGGAGGGCAATACGCGACTCTGCGTAGTATCAT
TGACCTATTTACTGTGGATGTGCCCTGATCCTTATCTCTCACTCGTCTCT
CGTACTGAATCCCACATATGTAAAAGTAGAAGATAGGATTTGTCTTCGAC
AGAGCCTTGTGGCAATTATGCGTTTCTGAGGGTGTTCACTTACATTACTT
CCACCCCGCTTTTTTAAGGTCATTGCGTGCGTTTGCATCAGGCTTGTACG
AGTGAGCGATTTCGATCGGGTGGTGGTGAGGTACATCTGTAGTCCACCTT
TTTTTTTTCGCGGTCCTCTCTCCATGATGTATGTGGATTCATGTTATCAG
AAGTTTCACTACTTCAATTGTATCTATTCCCCCAACATTTTTGTGGCCTT
CAATATTTTCATTTTCACCCGTTTAGCGTTTCTGGTGGTGACCGGACTGG
AACCTGTGGCCCTGTGGACTAGAATTAGGCACATTATCTCTTCGTGTCGC
CAATGTGAAAGTAGAGTTTGTCCTCGACGGAGACTTGTGGGAATAATGCC
TTTCTAAGGGTGTTCTCCACAATAATATATTTTATTATGTTGACTGCCTG
TGTTTCCGTTCAACTTGCTTTAGTTTATCTGTGTTGGATTGCTTCTTATC
CAACCTCATGCTCTTCCACCGGGTATTATGCACTTTTTAGTTCGTATTTT
TCCCGTGCCCCCGTCCGTCCTACCAGGCGTTATATTTGATTCCTCATCAG
ATCCCTTACCTAACGAAATTGAACTTGGCGGGCTTGAGTGGAATAACCGC
GAGTGGGATCGCATACCTTTCCTTCTTGCCCTCCCTCGAGCATCTCAACC
TGGCGAGGTGCTGTCAGGTGCGCCATATGACATATGATTTTCCTGGACAT
ACTGCGACCCTAAGCCGGTGTTCCAGATCTTACGTCAAGATACTTCATGG
CTTTGTTCTTGTGCTAGCTTTTCCGATGCCGGCATAGCGTTTTTGGCGGA
TCTCCCGAGCAGGAACGCCGACCAATGCTAGCCCTTAGATTTTGACTCGG
TAACTAAGAACGGCTGAGGTCATTTGTTGAACAAGCGCTGCCCACAGTAC
GCAATGCTCTTGCTTTCTTCATTCGTGTGCTTGCACCCACTACGGTATCT
AGGGCCCCCTCCAAGACTTGGAATTTGATTTTGACCGATTTTTCTTCATT
CGGGCTGTTCTAAACGTATACGTTTTCCCCCCCTTTTTCCCGTTTTTTTT
TACCATGTCGAATTTTTCGAAATATCAAAAACAAAAATGTACTATCTCTG
CCTACAGTGTTCCCTTTATCCCTCTGGCGCCATGCCAAATTATTGCCGAG
CATCTGAAGTTGACAATCCAGGTATCTTGGGGGGGGGGGGGTGGCATATG
AAAAGGGGGAGGGGACATCTACCCGGGATCGGTGAATATTGGAAGATGGC
CAATACAATGTGCATAGACGAACCACAAGTGCACTGTCGTTAGTTGTGTT
GTTCTCGTCATTTCTTTTTCGCTGAACCGATACAACGGTATTTTCCTGAA
AACATCCTACATCCTAGGGCAACACATCATCACCTCTGTCTCCCCCGATC
TCAATCTATTTCTCCCTATCGTCGGCTGTCTGTATTTTACACTCAGACTT
CTGCCTGTTCTAAATTATGACGTATACTATGTCTACCAGGCCGGGCTCTA
TCTCCGTGTTGACCAACTTTTCGTGGCAGGCCCTCCTAGTTTCCTTTGTG
TGACTGTCGTACTTTTCCGGCAGAGCCTCCCAAGCCGCCCGTCCGTTTCC
AGGTAGCGGGGTTTCCTTCCCAGTATCTTTATATTGGCGTTGTCGTGCAA
TCCCTGAAACATTTATTCATTCCCATATGTTTGGTTATGGTTCGTCTGCG
GTTCATTTGGCAGTGTGGCACCAAAGGGGTTGAACCTACTTCAATTTTTT
TAGATTCAGCGTGTTATGGACGTAATTGAAAAAAAGAGAAAAGAGGAGAG
AGAAAAAGGGGGGGAAATACCCACAGTTAGAACGCCCCTTGTGCGGATCA
ACCCTGTTGTCGTTAGTCTTCCTTTCAATAACTCACTCGTTATCATCAAC
AGATCGGTGACGAGGCCGCAGCAGCGCTGGGACGTGGAAATTGCAGCGAC
TCCCTGAGATGGCTCGACCTATCTGGCACCGCGACGACCGATGACGGCGT
ATCATCTCTTCACCACACCAAGCTCCTGGAGTTCATCTCGCTGTCCTCTA
CTACCGTCTCTCTTGCCCTCGTCAACGCCCTTGCACGAGATCTTAACCTA
CCCGCCGCTCTACCAGACGCTCCCAAAATGCACGCGCGCTCTAACCGCAC
GTTGCTCATGGGGTCCCGCTGGTCTCGCCGGCAATCGGGCTTTGCCCCGC
GCAGACTTCCCCACTCTACTCGGAACACCGCGGGATCGCTTCGCTATGGC
CACGGCACGTCCAAACGTGGCTGGGAAGGCGGACCGAGTAAACTGCTGCG
CATCGGAACCGGGGTGGGGGTGGGGGACTGCCAGGTCGGCGGTAGTCGCA
AGAGACCTGTATTAGCGGGGGAGCCCGTTGTGCAGAAGGTGCAGGTGGGG
TTTGGGGACGGGGAAGGGGGGGATGGCGGCGGGGAAGGGGGGGATGGCGG
GGGGGGAGGAAGGGTGGGATATGGTGGGAGAGAGCTCTTGGTAGAATTGG
TGAACGGGATTGTTCGGCTATGGCCCGCGGTTCCTGTGCGTTGATGTTTT
AGCCATGGCTGATCAAAGTGCGCCGCAGATGCTGGTTTGACTCCTGTCCA
GGAAAATCTTCTAGGTTCCATAGTAGAAGTGATGTTTAGCGCAGTGAGAT
GTAAATGTGGTGGGGTGTGCCTGGGGTGTTGTTGGTAATGCCCAAGCTGC
GGAGAAAATGTATATAATTATCGGTATTATAGATGAGATGGCGAAGGAAA
TTTGTACAGTTGAGGCGAAACATTTTGGCCTGTTTAGTGGGATTTTGGTT
AAATTCATTACAATGGTTTTGTTCAACAGACTGTCATGAAACCCGCGTGC
ATGGCTGGACGGGCTCTTCAGTCGTCCTTGTTGCGTGCTTCTTTTCAACG
TGGTGTCAAAAAGGACTCGCGAACGCGTGTGGAGGTTTCGAGGAAAGCGC
CAATTACGGCTGCGGGGAGGAATGTGTCAGCTGATGAGCACACGATAGTC
AAGGGGCATGGGAAAAGGTGTACATTTAGCAGGTTTGAACCAGGCAGAAT
CAGATCAGACGGTATCTGTTTGCGCTCTTATTTTTTTACTGAAGTCACGG
TGTTGCGGTTATTAGCACCCACAGTAACAGGGTTGCCTTCGAAGGAAATG
ACCAAGCGGTTATCCCGGGCCCATTGCCAAGTTGTTTGCAACATGTCACG
AATCGGATTAAGTTTTTTTCTGTCAATCGTTGTGTATTTGTAGTATTTCA
AATTTAGTGCCTAAGAGCTCGAGAGATCCGGAAGTACATTGCAGGCTTTA
CGTGACCACGAGGAAAGCTCTTGGGCCACCAGCCGTTGATAAAGAGTCCA
CGGCGTTGGGTACTCTTTATACTCCAAAGCACAAGTAACGAGAGGCAGCA
GCTGCCGATCCGGCGTCTGTGGCTGCAAAAGCGTGTTATTGCAGTACAAC
GGGATTCCTGATATAGCGGGGTCGAAATCGCTTTTCGCGGTTGCAACGTG
ATATAGTAGGGTATCCCACTTTTTAGGGACTTTCCTCAAAAGCGCAATCC
CGGGTCTGACAATCGGGATATTAATAAAAAACGGCACGACTACGCTGTCA
TTCGAAGATTGTTGAAATATATGAGGCGCATTCAAAGTTCAAAATATGCG
GCTGTAGACTTGAGCTTGCAGTGGCTCAGCCGTGCGCATCAGCAGCACAC
GTGCAATGTGCAGCAGGAGAGCTGTGTATCATTCAATTAGCCACACCAAA
AGCCCCCAATGCCCACGTGTGGCGCG
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Coding sequence (CDS) from alignment at H-paniculata_contig1618:4052..17477+

>mRNA_H-paniculata_contig1618.3560.1 ID=mRNA_H-paniculata_contig1618.3560.1|Name=mRNA_H-paniculata_contig1618.3560.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1716bp|location=Sequence derived from alignment at H-paniculata_contig1618:4052..17477+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGAGTGCGACATGTGATGCATCCGGTTGCCATGAGCCTGCTACACAACG
GTGCTCTCGCTGCAAATGAGTGCGACATGTGATGCATCCGGTTGCCATGA
GCCTGCTACACAACGGTGCTCTCGCTGCAAATCTGTGCGATACTGTTGCC
GCGAGTGTCAGCGGCAGCATTGGACGATGGAGCACAAGGACAGCTGTGCT
TATCTCAGCACTCGTACGGCAATGATACATGAGAGCGAGATACTGCAAGA
TACCGCACGCCAACAGAGCATATCTGTGCGATACTGTTGCCGCGAGTGTC
AGCGGCAGCATTGGACGATGGAGCACAAGGACAGCTGTGCTTATCTCAGC
ACTCGTACGGCAATGATACATGAGAGCGAGATACTGCAAGATACCGCACG
CCAACAGAGCATGGACTCGCGTACAGGACAGAGCATACTGACGATACTCG
ACTCCATTGTCGGGTCGCGCGTTATTCCGCCGGAAGAAGCCCCGACACCG
GCAAGGGCAAACGGTTGGGAGCTGTGCCCTGTTGTCAACATGCTCGGTGT
CCCGCTTGCTATCAAGAAGGTTTCCGCCTGCCAATGCCAGCAATGTGTGG
GGTGCACGGCAACCCAAGACGTACCTGCGAACCAGATTGGACTCGCGTAC
AGGACAGAGCATACTGACGATACTCGACTCCATTGTCGGGTCGCGCGTTA
TTCCGCCGGAAGAAGCCCCGACACCGGCAAGGGCAAACGGTTGGGAGCTG
TGCCCTGTTGTCAACATGCTCGGTGTCCCGCTTGCTATCAAGAAGGTTTC
CGCCTGCCAATGCCAGCAATGTGTGGGGTGCACGGCAACCCAAGACGTAC
CTGCGAACCAGATTGCTACTCGTCTAGCGATCGAGCCGCAGACTGGTCGG
GCACCATTCAGATGGGCGGGTAGCGGTACTAATCACCTTGGCACCGTGTG
GGTGGCGCGGACCGACGGTCAAGCCTTCACCTCGAAAGAGTATGCTGTAA
GCTACTCGTCTAGCGATCGAGCCGCAGACTGGTCGGGCACCATTCAGATG
GGCGGGTAGCGGTACTAATCACCTTGGCACCGTGTGGGTGGCGCGGACCG
ACGGTCAAGCCTTCACCTCGAAAGAGTATGCTGTAAATCCTGGACGAGTA
CATTTTCAACAACATCTTCGATGTTTGGGGCTTGGATCCCCCCGACCGCG
ACAGGATGCTGCCCAGCGTGTACAACAGGCAGGCGTACTCGCGCTACTTC
GCCAGCAGGATGTCCGAAGACGGCATGCGTGCCGGCTTTTGAAGCATCTG
CAAACTCACCAAAATCTAGAAATTGGTATTGTGCGCCGTTCAACAGTAGT
TGGGTCATGGTGGCGCTGTGGGAGAGATTGGGGGGGGGTTCATTATGTCG
ACAGGAACAGGAATTGGGGGAAATAAATCCTGGACGAGTACATTTTCAAC
AACATCTTCGATGTTTGGGGCTTGGATCCCCCCGACCGCGACAGGATGCT
GCCCAGCGTGTACAACAGGCAGGCGTACTCGCGCTACTTCGCCAGCAGGA
TGTCCGAAGACGGCATGCGTGCCGGCTTTTGAAGCATCTGCAAACTCACC
AAAATCTAGAAATTGGTATTGTGCGCCGTTCAACAGTAGTTGGGTCATGG
TGGCGCTGTGGGAGAGATTGGGGGGGGGTTCATTATGTCGACAGGAACAG
GAATTGGGGGAAATAA
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