mRNA_H-paniculata_contig1616.3551.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig1616.3551.1 vs. uniprot
Match: A0A6H5KTC0_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KTC0_9PHAE) HSP 1 Score: 261 bits (666), Expect = 1.770e-71 Identity = 280/661 (42.36%), Postives = 319/661 (48.26%), Query Frame = 1
Query: 421 MFNFLWQGKVGEIMAPIKSPEAQLLIAIQNRQQDKIRELLEVQGVGANNANDRGIRPMHVACQSGDMPLVQRLLELGADTTTTDNXXXXXXXXXXXXXXXXXXXXXXXXXXGVEKRNSSRQTAYEVATDHVIRQYLLPLQLKAEADNPEYAVHGMGITSDT-PRNYEQYGVPGM-TMGSSHSHGQQYRGHGVGVPSGGMDPMSAALGALMQPAPSMANAPRPGTVAVGGAPPP---------------PAPPVGVGVATGNPPRPPGSFSPPDGTYNLNGFPATPSISAHATPRVTSSLPIPSAAPPLSPIPPRSPMAHFPGPA--------------------AAGPRPLVGL-GRGGSVSLLMNEGAASPRTFPPVAVQV------NQHPTTGKSTAAGATDGSVDINSGIPSVDTPPSPAGPSPVEGVDVPAISVGAGAADSSPAEVVVERDADQSASPKVVHITADVGGLGGGGFGVGAGVPPGSGGLAGAHGAVKTGIELPSRFQMQTTLASPSGGVLNVNAAHSPPPPGXXXXQAPTQRPTTAA---GDQSGK-FKLIKPDGFHSSASDPKLQERYGHTKILRDLGAPPTHAQLGGAGGLGAPYGAP-PMVGGPPRYAGAGYGQAQQPQYLPQTGHYAQFGGATNGGQSFGQPFG 2256
MFNFL QGKVGE+MAP++S EAQLLIAIQNRQQDKIRELLEV+GVGAN ANDRG+RPMH+ACQ+G+ LVQRLLELGAD XXXXXXXXXXXXXXXXXXXXXXXXX VE+RNS R TAY+VATDHVIRQ+LLPLQLKAEA NP+YAV+ MGITSD PR+YE +GVPGM + GG M AALGALMQ + APRPG G PPP P P G A + PGS+SPP +PA P S P T SLP+ A P P L G G + PR+FP VAVQ+ + A A D + P D P + P G SSP V+ + A V G GAG G G + G N A + PPP XXX +Q+GK FKLIKPDGFHSSASD LQ RYGHTKI+++ GAPPT AQLGGA G G G P P+ G PP G AQ+PQ Q G G +GQPFG
Sbjct: 1 MFNFLLQGKVGEMMAPVQSQEAQLLIAIQNRQQDKIRELLEVKGVGANTANDRGVRPMHMACQTGNNHLVQRLLELGADIIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPVEQRNSYRLTAYDVATDHVIRQFLLPLQLKAEAGNPDYAVNTMGITSDAAPRSYEHHGVPGMGSXXXXXXXXXXXXXXXXXXXXGGASSMDAALGALMQAPTMVPLAPRPGAGMAG--PPPMXXXXXXXXXXXXVYPPGPAGFPGA-----QQPGSYSPPGEGXXXXXYPAPPGASP---PAATGSLPLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAEGKTEVASPAPKGDLAGTGPPDAAAAAAATGGPRSFPGVAVQLAAXXXXXXXXXXXXXSPAAAPKAGEDFSGRPPFEDESLRPGAEAKANSSSSP------GDGPSSPLMSTVDLSSKFQAQVAV--------------SGAGAGAAAVEGSFVGGXXXXXXPVXXXXXH----------GSEPNCATAGAAPPPSVXXXXXXXXXXXXXXXPPAEQTGKKFKLIKPDGFHSSASDKVLQARYGHTKIVKEFGAPPTAAQLGGAKG-GYMAGPPMPLPGPPPNING----YAQKPQRQAQYGMMPPQQAVGGGQGHYGQPFG 616
BLAST of mRNA_H-paniculata_contig1616.3551.1 vs. uniprot
Match: D7FP01_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FP01_ECTSI) HSP 1 Score: 171 bits (432), Expect = 1.770e-45 Identity = 115/142 (80.99%), Postives = 126/142 (88.73%), Query Frame = 1
Query: 421 MFNFLWQGKVGEIMAPIKSPEAQLLIAIQNRQQDKIRELLEVQGVGANNANDRGIRPMHVACQSGDMPLVQRLLELGADTTTTDNXXXXXXXXXXXXXXXXXXXXXXXXXXGVEKRNSSRQTAYEVATDHVIRQYLLPLQLK 846
MFNFL QGKVGE+MAP++S EAQLLIAIQNRQQDKIRELLEV+GVGAN ANDRG+RPMH+ACQ+G+ LVQRLLELGAD T XXXXXXXXXXXXXXXXXXXXXXX VE+RNS R TAY+VATDHVIRQ+LLPLQLK
Sbjct: 1 MFNFLLQGKVGEMMAPVQSQEAQLLIAIQNRQQDKIRELLEVKGVGANTANDRGVRPMHMACQTGNNHLVQRLLELGADIITXXXXXXXXXXXXXXXXXXXXXXXXXXQGAAVEQRNSHRLTAYDVATDHVIRQFLLPLQLK 142
BLAST of mRNA_H-paniculata_contig1616.3551.1 vs. uniprot
Match: A0A835YRJ6_9STRA (Ankyrin repeat-containing domain protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YRJ6_9STRA) HSP 1 Score: 137 bits (346), Expect = 1.890e-33 Identity = 99/151 (65.56%), Postives = 121/151 (80.13%), Query Frame = 1
Query: 421 MFNFLWQGKVGEIMAPIKSPEAQLLIAIQNRQQDKIRELLEVQGVGANNANDRGIRPMHVACQSGDMPLVQRLLELGADTTTTDNXXXXXXXXXXXXXXXXXXXXXXXXXXGVEKRNSSRQTAYEVATDHVIRQYLLPLQLKAEADNPEYA 873
MFNFL+QG +G+I+API+SPE QLLIAIQNRQ DK + ++ + N A D G+ P+H+ACQ+G L++RL ELG D DNXXXXXXXXXXXXXXXXXXXXXXXXXX V+ RN+SRQ+ Y++AT+HV+RQYLLPLQLKAEA NP A
Sbjct: 1 MFNFLFQGNLGDIIAPIQSPEQQLLIAIQNRQMDKAKAMVCMYACLRNTAVDSGVTPVHMACQAGLQELLRRLAELGGDLAGADNXXXXXXXXXXXXXXXXXXXXXXXXXXXVDARNASRQSPYDLATNHVVRQYLLPLQLKAEASNPSSA 151
BLAST of mRNA_H-paniculata_contig1616.3551.1 vs. uniprot
Match: W7TGZ7_9STRA (Serine threonine-protein phosphatase 6 regulatory n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TGZ7_9STRA) HSP 1 Score: 103 bits (256), Expect = 1.950e-19 Identity = 64/168 (38.10%), Postives = 92/168 (54.76%), Query Frame = 1
Query: 415 SKMFNFLWQGKVGEIMAPIKSPEAQLLIAIQNRQQDKIRELLEVQGV--GANNANDRGIRPMHVACQSGDMPLVQRLLELGADT-TTTDNXXXXXXXXXXXXXXXXXXXXXXXXXXGVEKRNSSRQTAYEVATDHVIRQYLLPLQLKAE---ADNPEYAVHGMGITSD 900
S MF FL QG +GE++AP+K+P QL AI+ + DK +LL+ +GV A +A P+H ACQ+G+ ++ +L+E+GAD + TD V +RN+ RQTAY+VA H++RQ+LLPLQL+AE A AVH + D
Sbjct: 20 SGMFAFLSQGPLGELLAPVKAPHQQLHQAIEEHRHDKANQLLQ-EGVYFNAPDAGRGDALPIHTACQAGNQTMIDKLMEMGADARSATDRHGNGTLHAAAKGGKLETVKFLLAHGLDVSRRNAYRQTAYDVAESHIVRQFLLPLQLRAEPEPAAGSLAAVHNPDVIRD 186
BLAST of mRNA_H-paniculata_contig1616.3551.1 vs. uniprot
Match: A0A4D9DC57_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9DC57_9STRA) HSP 1 Score: 100 bits (249), Expect = 2.010e-18 Identity = 62/166 (37.35%), Postives = 90/166 (54.22%), Query Frame = 1
Query: 421 MFNFLWQGKVGEIMAPIKSPEAQLLIAIQNRQQDKIRELLEVQGV--GANNANDRGIRPMHVACQSGDMPLVQRLLELGADT-TTTDNXXXXXXXXXXXXXXXXXXXXXXXXXXGVEKRNSSRQTAYEVATDHVIRQYLLPLQLKAE---ADNPEYAVHGMGITSD 900
MF FL QG +GE++AP+K+P QL AI+ + DK +LL+ +GV A +A P+H ACQ+G+ ++ +L+E+GAD + TD V +RN+ RQTAY+VA H++RQ+LLPLQL+ E A AVH + D
Sbjct: 1 MFAFLSQGPLGELLAPVKAPHQQLHQAIEEHRHDKANQLLQ-EGVYFNAPDAGRGDALPIHTACQAGNQMMIDKLMEMGADVRSATDRHGNGTLHAAAKGGKLETVKFLLAHGLDVSRRNAYRQTAYDVAESHIVRQFLLPLQLRTEPEPAAGTLAAVHNPDVIRD 165
BLAST of mRNA_H-paniculata_contig1616.3551.1 vs. uniprot
Match: A0A7S3JRB0_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3JRB0_9STRA) HSP 1 Score: 68.2 bits (165), Expect = 5.010e-8 Identity = 46/142 (32.39%), Postives = 70/142 (49.30%), Query Frame = 1
Query: 445 KVGEIMAPIKSPEAQLLIAIQNRQQDKIRELLE---VQGVGANNANDRGIRPMHVACQSGDMPLVQRLLELGADTTTTDNXXXXXXXXXXXXXXXXXXXXXXXXXXG-VEKRNSSRQTAYEVATDHVIRQYLLPLQLKAEAD 858
++GE++AP+++ +L I+I+ R + ELL V +G N + D + P+HVAC + V+ LL GAD D + RN+ QT Y+VA D +RQ+LLPLQL+AEA+
Sbjct: 15 RIGEVVAPVQNENQELFISIRRRDWPRTHELLSSPNVDALGKNGSVD--MTPLHVACAEDFVQCVEYLLVNGADVNVRDTRAHETPLHHGARGGHSRVCRLLVERGASLVARNARNQTPYDVAKDLSLRQWLLPLQLRAEAE 154
BLAST of mRNA_H-paniculata_contig1616.3551.1 vs. uniprot
Match: A0A7R9U2B4_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U2B4_9STRA) HSP 1 Score: 65.9 bits (159), Expect = 2.150e-7 Identity = 55/210 (26.19%), Postives = 82/210 (39.05%), Query Frame = 1
Query: 421 MFNFLWQGKVGEIMAPIKSPEAQLLIAIQNRQQDKIRELL----------EVQGVGANNAN-----------------------DRGIRPMHVACQSGDMPLVQRLLELGADTTTTDNXXXXXXXXXXXXXXXXXXXXXXXXXXGVEKRNSSRQTAYEVATDHVIRQYLLPLQLKAEADNPEYAVHGMGITSDTPRNYEQYGV---PGMT 942
MF+ L+ G++GEI+AP+ P A++ +DK+ E L + +G A +A RG P+H AC+ G + +V+ +L D V RN + QT Y+ A HV+RQYLLP+QL+ E + G+ + TP Y Y V PG T
Sbjct: 1 MFDALFSGRIGEILAPLADPVDVFFRALETGDRDKMAEALASDAGLWQQRDRKGRSAAHATXXXXXXXXXXXXXXXXXXXXXXXQRGNTPLHYACEGGSLDMVKHILGKQVD---------------------------------VLARNGANQTPYDCAESHVVRQYLLPIQLRVENERGIGVDAGLSMLISTPAAYGHYDVMPPPGAT 177
BLAST of mRNA_H-paniculata_contig1616.3551.1 vs. uniprot
Match: A0A8J2SL02_9STRA (Hypothetical protein n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SL02_9STRA) HSP 1 Score: 65.1 bits (157), Expect = 2.950e-7 Identity = 64/144 (44.44%), Postives = 95/144 (65.97%), Query Frame = 1
Query: 445 KVGEIMAPIKSPEAQLLIAIQNRQQDKIRELLEVQGVGANNAND---RGIRPMHVACQSGDMPLVQRLLELGADTTT-TDNXXXXXXXXXXXXXXXXXXXXXXXXXXGVEKRNSSRQTAYEVATDHVIRQYLLPLQLKAEADNP 864
++GE++AP++ P +L IAI+ + LL+ G + N P+H+A ++ +P V+ LL+ GAD T + XXXXXXXXXXXXXXXXXXXXXXX R++ R+TAY+V+++ +RQ+LLPLQ++AEA+ P
Sbjct: 17 RIGEVVAPVEGPAQELQIAIRKHDWPTTQRLLQENFFGGDALNQPLGSDCTPLHLAAEADFVPCVEYLLDEGADVDARTRSTHEXXXXXXXXXXXXXXXXXXXXXXXXXXXRDNMRRTAYDVSSNLALRQWLLPLQMRAEAEEP 160
BLAST of mRNA_H-paniculata_contig1616.3551.1 vs. uniprot
Match: A0A7S3YI50_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3YI50_HETAK) HSP 1 Score: 53.5 bits (127), Expect = 5.560e-5 Identity = 20/34 (58.82%), Postives = 28/34 (82.35%), Query Frame = 1
Query: 1960 KLIKPDGFHSSASDPKLQERYGHTKILRDLGAPP 2061
++I+PDGFH+S SDP+LQ YGHTK+ R++ PP
Sbjct: 74 RIIQPDGFHTSTSDPRLQALYGHTKVRREVAPPP 107 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig1616.3551.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 9
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig1616.3551.1 >prot_H-paniculata_contig1616.3551.1 ID=prot_H-paniculata_contig1616.3551.1|Name=mRNA_H-paniculata_contig1616.3551.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=710bp MFNFLWQGKVGEIMAPIKSPEAQLLIAIQNRQQDKIRELLEVQGVGANNAback to top mRNA from alignment at H-paniculata_contig1616:12825..20872+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig1616.3551.1 ID=mRNA_H-paniculata_contig1616.3551.1|Name=mRNA_H-paniculata_contig1616.3551.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=8048bp|location=Sequence derived from alignment at H-paniculata_contig1616:12825..20872+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig1616:12825..20872+ >mRNA_H-paniculata_contig1616.3551.1 ID=mRNA_H-paniculata_contig1616.3551.1|Name=mRNA_H-paniculata_contig1616.3551.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=4260bp|location=Sequence derived from alignment at H-paniculata_contig1616:12825..20872+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |