prot_H-paniculata_contig1616.3550.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig1616.3550.1
Unique Nameprot_H-paniculata_contig1616.3550.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length69
Homology
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BLAST of mRNA_H-paniculata_contig1616.3550.1 vs. uniprot
Match: D7FHU9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHU9_ECTSI)

HSP 1 Score: 91.7 bits (226), Expect = 5.210e-20
Identity = 47/68 (69.12%), Postives = 55/68 (80.88%), Query Frame = 0 
Query:    2 GVVDGPVKVVETVEGLEPNATYEVFLTTETINSNGIYRQKMEPLMATTHPMPPAFLDARARAADASAS 69
            GV  G V  +ETVEGLEPNATYE+F+ TET NSNG+Y  K EP++ATTHP+PP  LDARA AADAS+S
Sbjct:  196 GVATGGV--LETVEGLEPNATYEIFIATETTNSNGVYHAKSEPVLATTHPVPPVLLDARAHAADASSS 261
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig1616.3550.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FHU9_ECTSI5.210e-2069.12Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig1616contigH-paniculata_contig1616:3096..4259 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig1616.3550.1mRNA_H-paniculata_contig1616.3550.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig1616 3094..4259 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig1616.3550.1 ID=prot_H-paniculata_contig1616.3550.1|Name=mRNA_H-paniculata_contig1616.3550.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=69bp
TGVVDGPVKVVETVEGLEPNATYEVFLTTETINSNGIYRQKMEPLMATTH
PMPPAFLDARARAADASAS
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