mRNA_H-paniculata_contig16135.3539.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig16135.3539.1 vs. uniprot
Match: A0A0R5QMD6_SACJA (Mannose-6-phosphate isomerase n=2 Tax=Saccharina japonica TaxID=88149 RepID=A0A0R5QMD6_SACJA) HSP 1 Score: 407 bits (1045), Expect = 7.110e-135 Identity = 251/414 (60.63%), Postives = 280/414 (67.63%), Query Frame = 1
Query: 1 QSQVAALVSRLIKNVPKPPEDCSPISPPPSKTPEEAPEPLRSVMTSIQQAEK--------------------------------------VDDG-------LTRNPSSHLGGFGPNGTG----------NAPRDFEPLEGNLN----DLWSPSNSSHSSNGNGVSSKRMESVDELNALDVLADDSASEEIFGKAFRGGRAAAAGLMTRLQREDADVQRVMLRLSKEYPGDLGILMPLMLNLLQLKPGMSFFMTVDEPHAYLRGDILEVMACSNNVVRAALTPKFRDVNLLVEMLTYNMGAPAVLPPETVDACRRRYTPPINDFEIQVLQVPADEKYELEAMPVPVVMVALKGGAGGRVIERGDKSGAGGREIAACEGGVFFLPAYTPVVVCSGS-GEGIELALAHTNLHWGSLA 1062
++QVAALVSRL KN P P+SPPPSK PE APEP+R + + + A + V +G LTRN S HLGG G G +A + L+ L+ S S +G+ S R E D+ A D LAD++ASEEIFGKAFRGG AA L RLQREDAD QRVMLR SKEYPGDLGILMPLMLNLLQLKPG++FFMTVDEPHAYLRGDILEVMACSNNVVRAALTPKFRDVNLLVEMLTYNMGAPAVLP ETVDACR+RYTPPINDFEIQ+LQVPA+E+YELEAM VPVVMVAL GGA GRVIE GREI ACEGGVFFLPAYTPVVVCSG+ G+GI++ALAHTNLHWG+LA
Sbjct: 201 RTQVAALVSRLEKNAPVV-NPGRPVSPPPSKNPERAPEPIREALIAHKAAVESXXXXXXXXXXXXXXXXXXXXXXXXXXXXSADGCVIPAVPEGCVIGGGSLTRNASMHLGGSMRGGAGGRQAMVGTLPSAKLSHDSLDRMLDVDVGXXXXXXAVSVSGDGSESSPIRAEPGDKC-ARDTLADETASEEIFGKAFRGGPEAATRLAARLQREDADSQRVMLRPSKEYPGDLGILMPLMLNLLQLKPGLAFFMTVDEPHAYLRGDILEVMACSNNVVRAALTPKFRDVNLLVEMLTYNMGAPAVLPAETVDACRKRYTPPINDFEIQILQVPANERYELEAMEVPVVMVALAGGADGRVIES-----ESGREIKACEGGVFFLPAYTPVVVCSGTKGDGIKMALAHTNLHWGTLA 607
BLAST of mRNA_H-paniculata_contig16135.3539.1 vs. uniprot
Match: D7FPP3_ECTSI (Mannose-6-phosphate isomerase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FPP3_ECTSI) HSP 1 Score: 372 bits (954), Expect = 2.320e-122 Identity = 226/341 (66.28%), Postives = 251/341 (73.61%), Query Frame = 1
Query: 1 QSQVAALVSRLIKNVPKP--PEDCSPISPPPSKTPEEAPEPLRSVMTSIQQAEKVDDG--------LTRNPSSHLGGFGPNG--TGNAPRDFEPLEGNLNDLWSPSNSSHSSNGNGVSSKRMESVDELNALDVLADDSASEEIFGKAFRGGRAAAAGLMTRLQREDADVQRVMLRLSKEYPGDLGILMPLMLNLLQLKPGMSFFMTVDEPHAYLRGDILEVMACSNNVVRAALTPKFRDVNLLVEMLTYNMGAPAVLPPETVDACRRRYTPPINDFEIQVLQVPADEKYELEAMPVPVVMVALKGGAGGRVIERGDKSGAGGREIAACEGGVFFLPAYTPV 987
++QVAALVSRL KN P P+D S S K ++APEPLR V+ + A + + G L +NPS HLGG+ G G AP P G + S S ++ + S + + A DVLAD SEEIFGKAFRGG AAAGLM RLQREDAD QRVMLRLSKEYPGDLGILMPLMLNLL LKPG++FFMTVDEPHAYLRGDILEVMACSNNVVRAALTPKFRDVNLLVEMLTYNMGAPAVLP ETVDACR+RYTPPINDFEIQ+LQVPA+E+YELEAMPVPVVMVAL+GG GGRVIE REI ACEGGVFFLPA+TPV
Sbjct: 201 RTQVAALVSRLEKNFPAEATPDDVS-ASMNGLKI-DQAPEPLREVLAAKSAAGQDNGGAVPDEQKTLNKNPSMHLGGYVFKGGEQGGAPSP-PPTLGTVPSFSVGSPSRDGADCDASVSSPPGAEERKRAEDVLADVDKSEEIFGKAFRGGPKAAAGLMARLQREDADSQRVMLRLSKEYPGDLGILMPLMLNLLHLKPGLAFFMTVDEPHAYLRGDILEVMACSNNVVRAALTPKFRDVNLLVEMLTYNMGAPAVLPAETVDACRKRYTPPINDFEIQILQVPANERYELEAMPVPVVMVALEGGDGGRVIESKTD-----REIKACEGGVFFLPAFTPV 533
BLAST of mRNA_H-paniculata_contig16135.3539.1 vs. uniprot
Match: A0A0R5QMD0_SACJA (Mannose-6-phosphate isomerase n=1 Tax=Saccharina japonica TaxID=88149 RepID=A0A0R5QMD0_SACJA) HSP 1 Score: 266 bits (680), Expect = 6.970e-82 Identity = 138/226 (61.06%), Postives = 169/226 (74.78%), Query Frame = 1
Query: 382 SEEIFGKAFRGGRAAAAGLMTRLQREDADVQRVMLRLSKEYPGDLGILMPLMLNLLQLKPGMSFFMTVDEPHAYLRGDILEVMACSNNVVRAALTPKFRDVNLLVEMLTYNMGAPAVLPPETVDACRRRYTPPINDFEIQVLQVPADEKYELEAMPVPVVMVALKGGAGGRVIERGDKSGAGGREIAACEGGVFFLPAYTPVVVCSGSGEGIELALAHTNLHWGSL 1059
+E +F FR G AA L R+++E+ DV RVMLRLS EYPGDLGILMPL+LNLL LK G +FFMTVDEPHAYLRGDILE MACSNNVVR ALTPK+RDV+LLV+ML+YNM APAVL P TVD R+R+TPP+ DFEI+ + VPA++ Y LE MPVP V+V LKG GG +++ G+EI A GG+FFLPA T + SG + +A+AHTNL+WG +
Sbjct: 250 TETMFDSRFRQGSLAAEALDKRMKKENPDVVRVMLRLSTEYPGDLGILMPLVLNLLMLKTGKAFFMTVDEPHAYLRGDILECMACSNNVVRCALTPKYRDVDLLVDMLSYNMAAPAVLHPHTVDDNRKRFTPPVADFEIEDIHVPANDVYGLEPMPVPAVLVTLKGTQGGLLLDEDT-----GKEIEAAAGGIFFLPANTHCTLVSGKLSELHIAMAHTNLNWGPM 470
BLAST of mRNA_H-paniculata_contig16135.3539.1 vs. uniprot
Match: D8LB30_ECTSI (Mannose-6-phosphate isomerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LB30_ECTSI) HSP 1 Score: 257 bits (656), Expect = 2.890e-78 Identity = 132/226 (58.41%), Postives = 164/226 (72.57%), Query Frame = 1
Query: 382 SEEIFGKAFRGGRAAAAGLMTRLQREDADVQRVMLRLSKEYPGDLGILMPLMLNLLQLKPGMSFFMTVDEPHAYLRGDILEVMACSNNVVRAALTPKFRDVNLLVEMLTYNMGAPAVLPPETVDACRRRYTPPINDFEIQVLQVPADEKYELEAMPVPVVMVALKGGAGGRVIERGDKSGAGGREIAACEGGVFFLPAYTPVVVCSGSGEGIELALAHTNLHWGSL 1059
+E++F FR G + L R++ DV RVMLRLS EYPGDLGILMPL+LNLL LK G +FFMTVDEPHAYLRGDILE MACSNNVVR ALTPKFRDV+LLV+MLTYNM APAVL P +D R+R+TPP++ FEI+++ VP ++ Y L MPVP V+V L G GG +++ G+EI A EGG+FFLPA T + SG + +A+AHTNL+WG +
Sbjct: 253 TEQMFEARFRQGCPTSEALDKRMKDGTPDVVRVMLRLSTEYPGDLGILMPLVLNLLMLKTGQAFFMTVDEPHAYLRGDILECMACSNNVVRCALTPKFRDVDLLVDMLTYNMAAPAVLRPHIIDDNRKRFTPPVDVFEIEMINVPGNDAYRLNPMPVPAVLVTLHGAQGGLLLDEDT-----GKEIPAAEGGIFFLPANTYCTMVSGKTSDLRIAMAHTNLNWGPM 473
BLAST of mRNA_H-paniculata_contig16135.3539.1 vs. uniprot
Match: A0A835YY41_9STRA (Mannose-6-phosphate isomerase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YY41_9STRA) HSP 1 Score: 181 bits (459), Expect = 1.970e-49 Identity = 105/242 (43.39%), Postives = 151/242 (62.40%), Query Frame = 1
Query: 349 NALDVLADDSASEEIFGKAF--RGGRAAAAGL-----MTRLQREDADVQRVMLRLSKEYPGDLGILMPLMLNLLQLKPGMSFFMTVDEPHAYLRGDILEVMACSNNVVRAALTPKFRDVNLLVEMLTYNMGAPAVLPPETVDACRRRYTPPINDFEIQVLQVPADEKYELEAMPVPVVMVALKGGAGGRVIERGDKSGAGGREIAACEGGVFFLPAYTPVVVCSGSGEG-IELALAHTNLHW 1050
NA D+ EE+ GK G GL + RL+ E+ + ++MLRL++EYPGD+GI+MPL+LN L+L+PG +FFM +EPHAYLRGDI+EVMA S+NVVR ALTPK+RDV LL ++LTY MGAP ++ P V R+TPP+ DFE++V+ +P +++ +++ VP + + L GG G + G G E G F+PA V + S + + +A+AHTN+HW
Sbjct: 215 NASAEAEDEVELEEMLGKVICLAAGDGECPGLTARTMLRRLRAEERSIHKLMLRLNEEYPGDIGIMMPLLLNYLRLEPGQAFFMGANEPHAYLRGDIMEVMARSDNVVRVALTPKYRDVPLLCDILTYKMGAPPLVLPRRVSPYCLRFTPPVADFELEVVTLPHAQQFSFDSIKVPSIFLVL-GGTGWATDDDG------GAEKELWSGVSMFVPARCAVNFRATSTDAPLLVAVAHTNIHW 449
BLAST of mRNA_H-paniculata_contig16135.3539.1 vs. uniprot
Match: A0A6H5KTB4_9PHAE (Mannose-6-phosphate isomerase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KTB4_9PHAE) HSP 1 Score: 181 bits (459), Expect = 2.740e-49 Identity = 103/224 (45.98%), Postives = 139/224 (62.05%), Query Frame = 1
Query: 385 EEIFGKAFRGGRAAAAGLMTRLQREDADVQRVMLRLSKEYPGDLGILMPLMLNLLQLKPGMSFFMTVDEPHAYLRGDILEVMACSNNVVRAALTPKFRDVNLLVEMLTYNMGAPAVLPPETVDACRRRYTPPINDFEIQVLQVPADEKYELEAMPVPVVMVALKGGAGGRVIERGDKSGAGGREIAACEGGVFFLPAYTPVVVCSGSGEGIELALAHTNLHWGS 1056
E+I+G + R ++ RL+ ED VQ +M RLSKEYPGD+GI+MPL+LN L++ G SFFM +EPHAYL+GDI+EVMA S+NVVR ALTPK RDV LL E+LTYNMGAP ++ P VD C R+TPPI DFE+ ++VP +Y A+PVP + + L+G + G R+ G V F+ A + +G + + HTNL+ S
Sbjct: 247 EDIYGADYEY-REKGEMMLGRLRTEDYYVQDLMRRLSKEYPGDIGIMMPLLLNYLRMGEGESFFMAANEPHAYLKGDIMEVMARSDNVVRVALTPKHRDVPLLCEILTYNMGAPPIVAPIQVDQCCHRFTPPIKDFELDDMKVPEGSEYTPLAIPVPSICMVLEGVG---------SASDGVRDTVLRPGVVVFVAARSVATFKPDAGSSLRVIRTHTNLNMDS 460
BLAST of mRNA_H-paniculata_contig16135.3539.1 vs. uniprot
Match: A0A6H5KZH6_9PHAE (Mannose-6-phosphate isomerase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZH6_9PHAE) HSP 1 Score: 176 bits (446), Expect = 8.210e-46 Identity = 96/205 (46.83%), Postives = 130/205 (63.41%), Query Frame = 1
Query: 445 RLQREDADVQRVMLRLSKEYPGDLGILMPLMLNLLQLKPGMSFFMTVDEPHAYLRGDILEVMACSNNVVRAALTPKFRDVNLLVEMLTYNMGAPAVLPPETVDACRRRYTPPINDFEIQVLQVPADEKYELEAMPVPVVMVALKGGAGGRVIERGDKSGAGGREIAACEGGVFFLPAYTPVVV---CSGSGEGIELALAHTNLHW 1050
R +ED ++ ++LRL++EYPGD+GI+MPL+LN L++ G SFFM +EPHAYL+GDILEVMA S+NVVR ALTPK RDV LL ++LTYNMGAP ++ P VD C RYTPPI DFE+ +QVP ++Y PV + + + G + AG C G FF+PA T VV C + + LA +N+++
Sbjct: 533 RRAKEDLALRELILRLAEEYPGDIGIMMPLLLNYLRMGEGESFFMAANEPHAYLKGDILEVMARSDNVVRVALTPKHRDVPLLCQILTYNMGAPPIVTPIQVDQCCSRYTPPIKDFEMLDIQVPHGQEYATPPAPVAALAIVMAGTG---------VACAGNGTQRLCRGMAFFVPAETTVVYTNSCVAGEAALWVCLARSNINY 728
BLAST of mRNA_H-paniculata_contig16135.3539.1 vs. uniprot
Match: A0A6H5KK22_9PHAE (Mannose-6-phosphate isomerase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KK22_9PHAE) HSP 1 Score: 160 bits (406), Expect = 3.970e-45 Identity = 78/142 (54.93%), Postives = 102/142 (71.83%), Query Frame = 1
Query: 628 MACSNNVVRAALTPKFRDVNLLVEMLTYNMGAPAVLPPETVDACRRRYTPPINDFEIQVLQVPADEKYELEAMPVPVVMVALKGGAGGRVIERGDKSGAGGREIAACEGGVFFLPAYTPVVVCSGSGEGIELALAHTNLHWG 1053
MACSNNVVR ALTPKFRDV+LLV+ML+YNM APAVL P +D R+R+TPP++ FEI+++ VP ++ Y L MPVP V+V L G GG +++ G+EI A EGG+FFLPA T + SG + +A+AHTNL+WG
Sbjct: 1 MACSNNVVRCALTPKFRDVDLLVDMLSYNMAAPAVLQPHVIDDNRKRFTPPVDVFEIEMINVPGNDAYRLNPMPVPAVLVTLHGAQGGLLLDEDT-----GKEIPAAEGGIFFLPANTYCTMVSGKKSDLRIAMAHTNLNWG 137
BLAST of mRNA_H-paniculata_contig16135.3539.1 vs. uniprot
Match: D7FIF5_ECTSI (Mannose-6-phosphate isomerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIF5_ECTSI) HSP 1 Score: 145 bits (367), Expect = 5.880e-39 Identity = 84/179 (46.93%), Postives = 109/179 (60.89%), Query Frame = 1
Query: 523 LMPLMLNLLQLKPGMSFFMTVDEPHAYLRGDILEVMACSNNVVRAALTPKFRDVNLLVEMLTYNMGAPAVLPPETVDACRRRYTPPINDFEIQVLQVPADEKYELEAMPVPVVMVALKGGAGGRVIERGDKSGAGGREIAACEGGVFFLPAYTPVVV---CSGSGEGIELALAHTNLHW 1050
+MPL+LN L++ G SFFM +EPHAYL+GDILEVMA S+NVVR ALTPK RDV LL ++LTYNMGAP ++ P VD RYTPPI DFE+ +QVP ++Y PV + V + G G GR+ C G FF+PA T VV C + + LA +N+++
Sbjct: 1 MMPLLLNYLRMGEGESFFMAANEPHAYLKGDILEVMARSDNVVRVALTPKHRDVPLLCQILTYNMGAPPIVTPIQVDQFCSRYTPPIKDFEMLDIQVPHGQEYATPPAPVAALAVVMAG--------TGFACAGNGRQ-RLCRGMAFFVPAETTVVYTNSCVAGEAALWVCLARSNINY 170
BLAST of mRNA_H-paniculata_contig16135.3539.1 vs. uniprot
Match: A0A7S1TSA3_9STRA (Mannose-6-phosphate isomerase n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TSA3_9STRA) HSP 1 Score: 147 bits (371), Expect = 1.990e-38 Identity = 80/198 (40.40%), Postives = 121/198 (61.11%), Query Frame = 1
Query: 457 EDADVQRVMLRLSKEYPGDLGILMPLMLNLLQLKPGMSFFMTVDEPHAYLRGDILEVMACSNNVVRAALTPKFRDVNLLVEMLTYNMGAPAVLPPETVDACRRRYTPPINDFEIQVLQVPADEKYELEAMPVPVVMVALKGGAGGRVIERGDKSGAGG--REIAACEGGVFFLPAYTPVVVC-SGSGEGIELALAHTN 1041
E+A+++++MLRL+ ++PGD G ++PL+LN L+L+PG FFM ++PHAY+ GDILE MACS+NVVR ALTPK+RDV LVEMLTY G P + +DA + ++PP+ + E+ + + E Y L A+ +++ AG V E +G + G +F+PA V + +G+ +A AHTN
Sbjct: 67 EEAELRKLMLRLNAQFPGDTGAMVPLLLNYLKLEPGQGFFMGANKPHAYIAGDILETMACSDNVVRVALTPKYRDVETLVEMLTYECGVPTIDSGAAIDAHTKVFSPPVYECEVDMTSIAGAESYALRALGSCSILLVTDV-AGAVVAEAAPLAGVPHLLSRVELKVGETYFIPAGVEVTLTGAGADAACSVARAHTN 263 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig16135.3539.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig16135.3539.1 >prot_H-paniculata_contig16135.3539.1 ID=prot_H-paniculata_contig16135.3539.1|Name=mRNA_H-paniculata_contig16135.3539.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=355bp QSQVAALVSRLIKNVPKPPEDCSPISPPPSKTPEEAPEPLRSVMTSIQQAback to top mRNA from alignment at H-paniculata_contig16135:165..4136+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig16135.3539.1 ID=mRNA_H-paniculata_contig16135.3539.1|Name=mRNA_H-paniculata_contig16135.3539.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=3972bp|location=Sequence derived from alignment at H-paniculata_contig16135:165..4136+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig16135:165..4136+ >mRNA_H-paniculata_contig16135.3539.1 ID=mRNA_H-paniculata_contig16135.3539.1|Name=mRNA_H-paniculata_contig16135.3539.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=2130bp|location=Sequence derived from alignment at H-paniculata_contig16135:165..4136+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |