prot_H-paniculata_contig16115.3534.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig16115.3534.1
Unique Nameprot_H-paniculata_contig16115.3534.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length870
Homology
BLAST of mRNA_H-paniculata_contig16115.3534.1 vs. uniprot
Match: D8LKD6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKD6_ECTSI)

HSP 1 Score: 208 bits (529), Expect = 2.220e-54
Identity = 128/361 (35.46%), Postives = 207/361 (57.34%), Query Frame = 0
Query:  508 VRKVVAAESAADKLMNLRGNVTKILLLDVCGPGDLLPDDPDIMIPKGNKYMLIFFNIAGNTSLINPSNPHYPQKLVNSLVFLHNILDDKGTIIIALEGLDGEHLVVVRGALQKAELLVEQNPIVSLYVHGRSGRIPDTMKNQLQNQASNVVIAHKGSDWVCNG---GGARGGQGARAKQARLEPPRTVESEAIGVVWSYKHPPSRTFLAPNVADWCIKRFTDPGDAVLVSAADRDDLASLVLGEGRKYGALVSNAAKASDVAKDLDTACEIAVERGWFGSLTQSPIMPGADTLPCSVPVSQ------ELVKAQESINDDEDGD---LAHRTIAETFAAPFDLEIKESPKHGKGLFAAKDLK 856
            VR +  A +  ++   LR  VT +  +D+    D       + + + +  ML+F N+  + SL++ ++    ++L   LV L ++L  +GT++IA+  +       +   L+ A+L +E+NP+VS+Y+ G+ GRIP+ +KN L  Q  +V++AHK +D+ C+G   G  R  +GA A  A  + PR    EA+G V S KHP + TFL+ + AD  I RFT PGD VLV+  + + LASLVLG+GR  GALV+++ KA +   +++ AC  A + GWF  L ++ ++    TLP  +P S       +  ++Q + +D+ED D   L+   +A   A   +LEIK+S  HG GLFA KD++
Sbjct:   26 VRTLSKAAAKTEQWAKLRKEVTTVQSVDIFS-SDFDSTTRPLEVDR-DSAMLVFVNLGADPSLLDGTD-EATERLHAGLVALESVLHPRGTVVIAMGSIANFDFPCMEARLKAADLAMEKNPVVSIYLEGQPGRIPERLKNHLTTQGCSVLVAHKTNDFACHGHPLGKRRAARGA-ASSASFKSPRQASFEAVGFVVSDKHPSTATFLSTSTADHLINRFTVPGDCVLVTTFEENPLASLVLGQGRHLGALVADSTKAENAEVEVNEACVTATKHGWFAELNKTEVIMTGSTLPSCIPSSNLSAHAAKQYESQRATDDEEDTDGDVLSALDVARELAGAMELEIKDS-SHGLGLFATKDIE 381          
BLAST of mRNA_H-paniculata_contig16115.3534.1 vs. uniprot
Match: A0A6H5KBC1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBC1_9PHAE)

HSP 1 Score: 87.0 bits (214), Expect = 6.390e-14
Identity = 75/251 (29.88%), Postives = 105/251 (41.83%), Query Frame = 0
Query:   12 LSGLLERTFLGTFTVPVSNLTLTRSGRDLREAGVLQIRQSIENDGWLGSSVIVAALESGTDTQMTQERASTLPLRVIDGNHRCCALQRLDLERGTASKLSVQLHQPMTFTTEKFVAECMNLKAELIVERTLADKIRWYQSFVIAEQKKTPAISINTIATRLKALFKDQGVECPSAPTLKKNIQAVINITKRGLAALKDVTHLEDREPNSLDLRPTA-GLQYKRITLKALLRDEFAKAEAVVQETYIYRIAA 261
            ++  L  +F+G++ VPV NL LT SGR +R  GV Q R+SI ++GWL + +I A   +G +    + +A T  LRVIDG HR     R                                                       A+ KK+       +A   +AL ++                        GL AL DVT+L +R     DL+P+  GL + R+TLKALLR EFA     VQ  YIYR+A+
Sbjct:    1 MNSRLTESFVGSWKVPVCNLDLTGSGRQVRHQGVAQTRKSIASNGWLDTRII-ACWGAGDEEVFDEGKAKTTTLRVIDGRHRFGIRTR-------------------------------------------------------AQGKKS-------VANATRALKEE------------------------GLNALMDVTYLPERPAGHRDLQPSPDGLHFARVTLKALLRPEFAAMPGEVQAAYIYRMAS 164          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig16115.3534.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LKD6_ECTSI2.220e-5435.46Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KBC1_9PHAE6.390e-1429.88Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 398..432

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig16115contigH-paniculata_contig16115:412..5887 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig16115.3534.1mRNA_H-paniculata_contig16115.3534.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig16115 396..5999 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig16115.3534.1 ID=prot_H-paniculata_contig16115.3534.1|Name=mRNA_H-paniculata_contig16115.3534.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=870bp
MSTSIAPEKKGLSGLLERTFLGTFTVPVSNLTLTRSGRDLREAGVLQIRQ
SIENDGWLGSSVIVAALESGTDTQMTQERASTLPLRVIDGNHRCCALQRL
DLERGTASKLSVQLHQPMTFTTEKFVAECMNLKAELIVERTLADKIRWYQ
SFVIAEQKKTPAISINTIATRLKALFKDQGVECPSAPTLKKNIQAVINIT
KRGLAALKDVTHLEDREPNSLDLRPTAGLQYKRITLKALLRDEFAKAEAV
VQETYIYRIAAGYLTGIVTEEQYVRLDHEANIIGRTITAVENIAPRDKWS
SAFTLTMHKLRTYDRAQKSLSHFDTVQATIDIYKKKLPEGMEPCERYVDV
LEAHPPAHVLKAIKDDSALSSFYETFDVERRAAKIAADDAVTAFKQKLLD
NERAAKEAEGAAKKAKEAEEAAEKAKEAAEVAPAAAAAAAKEAADAAAKA
AGKTPTATADQTASVPGYKASATITPAASSANKEDGEKGENKTALGAAQK
KRKREAPVRKVVAAESAADKLMNLRGNVTKILLLDVCGPGDLLPDDPDIM
IPKGNKYMLIFFNIAGNTSLINPSNPHYPQKLVNSLVFLHNILDDKGTII
IALEGLDGEHLVVVRGALQKAELLVEQNPIVSLYVHGRSGRIPDTMKNQL
QNQASNVVIAHKGSDWVCNGGGARGGQGARAKQARLEPPRTVESEAIGVV
WSYKHPPSRTFLAPNVADWCIKRFTDPGDAVLVSAADRDDLASLVLGEGR
KYGALVSNAAKASDVAKDLDTACEIAVERGWFGSLTQSPIMPGADTLPCS
VPVSQELVKAQESINDDEDGDLAHRTIAETFAAPFDLEIKESPKHGKGLF
AAKDLKQEHIDVRLMGNFR*
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