mRNA_H-paniculata_contig161.3528.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig161.3528.1 vs. uniprot
Match: A0A6H5JTW1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTW1_9PHAE) HSP 1 Score: 414 bits (1063), Expect = 5.880e-132 Identity = 304/626 (48.56%), Postives = 389/626 (62.14%), Query Frame = 1
Query: 250 KINSEMSGNFQKLLVTLLRGERDESTEP-NVEQAEVQANELHETKDPSATFVEILTSSSRAQVAAISDAYEKMHGKSLVKHVTKTFSGDMEDALLSLLFDPIEIFARGLKNAFHGIGTDKEAVCRILAGNDKATCMAIAERYQAKYDASLVDALKKELRAGTFEEGAVAWVSSIDPSGGAEADTETSLEEAAEESEGEDPDIHSF---DREMTQEGDN------------GEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMKCRLAKAKTEAK------KARQRNRMLTKKRNCALRVSKISCGAREQV-DFAKNRYENDSIPGLTVWGKFQPHLYAQHNDDVDVDEAWEHFMKSGFTQGRLVRMDNDCGAFVGSLDLKAYVERHGVDVSDVNQKPPFERELFGWRHYVNEGKEADLDIPIT-----------------------------RVVPIFLLAKFDVARYVSKYPDVWRASRPARPGKFSVAGYLKLHPEAEEEGMSAFQHYTKNRQNEICVRGLVGPPNRR--QKKYGKRFKHFFRRGFNEGLHIKVISESMSPLAHYCRYGHAEGRELWLLTAVGAFDGVLDKVAFMSVRRA 1965
+I+SEMSG F+ LL+ LL+GERDES E + E AE QA LH+T D + TFVE+L SSRAQV I AYE +G+SL K + K F G MEDALLSLLFDPIE FARGLK AFHG+GTDK+AVCRIL GNDK TC IAER++ KYD SLVDALK ELR G FE+G VAWVS+IDP+ G E A E E ED + E ++G XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXM+ R+ +AK +A+ RM ++R + + + RY +D+I GLTVWGK+ LY +HN+D++ + W HF KSGF++GRLVR+DN+ GAFVG +D+ AY+++H ++ S V ++ PFE+ L G++H+V G + LDI IT +VVPI+LL F+ +Y+S + + P RPGKF GY KLHPE E+EG+ F+H+ NR+NEICVRG G NRR ++K G+ +GLHIKV +++PL H+C G +GR+L + T VG FDG++D F+ + A
Sbjct: 5 QISSEMSGAFRDLLLMLLKGERDESAEEGDPEVAEAQAETLHDTDDKNTTFVEVLAKSSRAQVTCIRKAYEDKYGRSLAKTIEKKFFGKMEDALLSLLFDPIENFARGLKAAFHGLGTDKDAVCRILGGNDKQTCRLIAERFEQKYDQSLVDALKDELR-GKFEKGTVAWVSAIDPAAGKEG-----FRIAREPCEQEDQXXXXXXXGEIETPRKGGQPXXXXXXGKPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQAAXXXXXXXXXXXMRARMVRAKRQAEVEXXXXXXXXXXRMFAQRRTLPENMRAAAAFVMILLRTILPRRYGSDAIEGLTVWGKWDSELYVKHNEDIEGEHGWSHFRKSGFSEGRLVRIDNNFGAFVGVVDMSAYMDKHDINASAVGKRRPFEKPLIGFKHFVETGCDESLDIAITHVGGTVMVFMTVRLLLMRKCSLRPFVGAAQVVPIYLLGDFNHRKYISVNRNAKQEMEPPRPGKFDDEGYRKLHPEIEDEGLEPFEHFKANRRNEICVRGRAGKVNRRWYKRKXXXXXXXXXXXGYRKGLHIKVKGHALTPLQHFCTLGFKDGRKLRMQTGVGVFDGMVDLDVFLELYPA 624
BLAST of mRNA_H-paniculata_contig161.3528.1 vs. uniprot
Match: D8LG01_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LG01_ECTSI) HSP 1 Score: 350 bits (897), Expect = 5.200e-107 Identity = 188/264 (71.21%), Postives = 214/264 (81.06%), Query Frame = 1
Query: 1 FRESYGMTLKAQLEKDMSGDLQTFMVYTQMKTDEFDALQMKKAMAGIGTDEDIMIMMLTTRSNEAIAAARKYYEGCFDESLIDKINSEMSGNFQKLLVTLLRGERDESTEP-NVEQAEVQANELHETKDPSATFVEILTSSSRAQVAAISDAYEKMHGKSLVKHVTKTFSGDMEDALLSLLFDPIEIFARGLKNAFHGIGTDKEAVCRILAGNDKATCMAIAERYQAKYDASLVDALKKELRAGTFEEGAVAWVSSIDPSGGAE 789
+R YGMTL+ QLEKD+SGDL+TFMVYTQM+T EFDAL MKKAMAGIGTDEDIMIM+LTTR N AIAAA+ YYEG +DESL+DKI+SEMSG F+ LL+ LLRGERDES E + E AE QA LH+T D + TFVE+L SSRAQVA I AYE +G+SL K + K F G MEDALLSLLFDPIE FARGLK AFHG+GTDK+AVCRIL GNDK TC IAER++ KYD SLVDALK ELR G FE+G VAWVS+IDP+ G E
Sbjct: 328 YRTMYGMTLREQLEKDLSGDLKTFMVYTQMETQEFDALLMKKAMAGIGTDEDIMIMLLTTRDNAAIAAAQTYYEGRYDESLVDKISSEMSGAFRDLLLVLLRGERDESAEEGDPEAAEAQAETLHDTDDKNTTFVEVLAKSSRAQVACIRKAYEDKYGRSLAKTIEKKFFGKMEDALLSLLFDPIENFARGLKAAFHGLGTDKDAVCRILGGNDKQTCRLIAERFEQKYDQSLVDALKDELR-GKFEKGTVAWVSAIDPAAGKE 590
BLAST of mRNA_H-paniculata_contig161.3528.1 vs. uniprot
Match: D8LG00_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LG00_ECTSI) HSP 1 Score: 208 bits (530), Expect = 7.360e-60 Identity = 91/181 (50.28%), Postives = 129/181 (71.27%), Query Frame = 1
Query: 1198 NRYENDSIPGLTVWGKFQPHLYAQHNDDVDVDEAWEHFMKSGFTQGRLVRMDNDCGAFVGSLDLKAYVERHGVDVSDVNQKPPFERELFGWRHYVNEGKEADLDIPITRVVPIFLLAKFDVARYVSKYPDVWRASRPARPGKFSVAGYLKLHPEAEEEGMSAFQHYTKNRQNEICVRGLVG 1740
+RY +D+I GLTVWGK+ LY +HN+D++ + W HF KSGF++GRLVR+DN+ GAFVG +D+ AY+++H ++ S V ++ PFE+ L G++HYV G + LDI IT VVPI+LL F+ +Y+S + + P RPGKF GY KLHPE E+EG+ F+H+ NR++EICVRG G
Sbjct: 10 HRYGSDAIEGLTVWGKWDSELYFKHNEDIEGEHGWSHFRKSGFSEGRLVRIDNNFGAFVGVVDMSAYMDKHDINASAVGKRRPFEKPLTGFKHYVETGCDEGLDIAITHVVPIYLLGDFNHRKYISVNRNAKQEMAPPRPGKFDDEGYRKLHPEIEDEGLEPFEHFKANRRSEICVRGRAG 190
BLAST of mRNA_H-paniculata_contig161.3528.1 vs. uniprot
Match: A0A6H5L407_9PHAE (Annexin n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L407_9PHAE) HSP 1 Score: 171 bits (433), Expect = 4.510e-41 Identity = 105/266 (39.47%), Postives = 152/266 (57.14%), Query Frame = 1
Query: 1 FRESYGMTLKAQLEKDMSGDLQTFMVYTQMKTDEFDALQMKKAMAGIGTDEDIMIMMLTTRSNEAIAAARKYYEGCFDESLIDKINSEMSGNFQKLLVTLLRGERDESTEPNVEQ--AEVQANELHETK------DPSATFVEILTSSSRAQVAAISDAYEKMHGKSLVKHVTKTFSGDMEDALLSLLFDPIEIFARGLKNAFHGIGTDKEAVCRILAGNDKATCMAIAERYQAKYDASLVDALKKELRAGTFEEGAVAWVSSIDP 774
+ YGM+++AQ++ + G + F+ Y + +FDAL +KKAM G+GT+E ++I L SN I AA+ ++ + + LID++ SE+SG + +++ L+RGER E V++ A QA ELH TF+ ILT +SR Q+ I YE+ HG SL K + K SG E LL+++ DPI +A LK AF GI +DK + R+L GNDK T IAE + Y SLV ALK E +G F + W+ S DP
Sbjct: 396 YHSLYGMSVEAQVKHECFGVYKDFLSYVLLPEADFDALMLKKAMDGLGTNEGLIISTLAPLSNARILAAKARHDQKYPKPLIDRLKSELSGAMEDVVLALIRGERQEDV---VDEGLAVQQAQELHAAGIGKRLGTDKKTFIRILTQASRPQIELIRQYYERNHGMSLEKAIKKECSGSFETMLLAMIKDPIAYYALLLKTAFKGISSDKSTIARVLGGNDKPTVQKIAELFLTNYGESLVAALKTET-SGKFRRAVLTWLCSSDP 657
BLAST of mRNA_H-paniculata_contig161.3528.1 vs. uniprot
Match: D7FJE4_ECTSI (Annexin n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJE4_ECTSI) HSP 1 Score: 168 bits (425), Expect = 2.980e-40 Identity = 104/266 (39.10%), Postives = 152/266 (57.14%), Query Frame = 1
Query: 1 FRESYGMTLKAQLEKDMSGDLQTFMVYTQMKTDEFDALQMKKAMAGIGTDEDIMIMMLTTRSNEAIAAARKYYEGCFDESLIDKINSEMSGNFQKLLVTLLRGERDESTEPNVEQ--AEVQANELHETK------DPSATFVEILTSSSRAQVAAISDAYEKMHGKSLVKHVTKTFSGDMEDALLSLLFDPIEIFARGLKNAFHGIGTDKEAVCRILAGNDKATCMAIAERYQAKYDASLVDALKKELRAGTFEEGAVAWVSSIDP 774
+ YGM+++AQ++ + G + F+ Y + +FDAL +KKAM G+GT+E ++I L SN I AA+ ++ + + LID++ SE+SG + +++ L+RGER E V++ A QA ELH TF+ ILT +SR Q+ I YE+ HG SL K + K SG E LL+++ DPI +A LK AF GI +DK A+ R+L GNDK IAE + Y SL+ ALK E +G F + W+ S DP
Sbjct: 417 YHSLYGMSVEAQVKYECFGVYKDFLSYVLLPEADFDALMLKKAMDGLGTNEGLIISTLAPLSNARILAAKARHDQKYPKPLIDRLKSELSGAMEDVVLALIRGERQEDV---VDEGLAVQQAQELHAAGIGKRLGTDKKTFIRILTQASRPQIELIRQYYERNHGMSLEKAIKKECSGSFETMLLAMIKDPIAYYALLLKTAFKGISSDKSAIARVLGGNDKPMVEKIAELFLTNYGESLMAALKTET-SGKFRRAVLTWLCSSDP 678
BLAST of mRNA_H-paniculata_contig161.3528.1 vs. uniprot
Match: A0A835YT40_9STRA (Anxa6 protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YT40_9STRA) HSP 1 Score: 164 bits (414), Expect = 1.120e-38 Identity = 101/258 (39.15%), Postives = 146/258 (56.59%), Query Frame = 1
Query: 1 FRESYGMTLKAQLEKDMSGDLQTFMVYTQMKTDEFDALQMKKAMAGIGTDEDIMIMMLTTRSNEAIAAARKYYEGCFDESLIDKINSEMSGNFQKLLVTLLRGERDESTEPNVEQAEVQANELHETK-----DPSATFVEILTSSSRAQVAAISDAYEKMHGKSLVKHVTKTFSGDMEDALLSLLFDPIEIFARGLKNAFHGIGTDKEAVCRILAGNDKATCMAIAERYQAKYDASLVDALKKELRAGTFEEGAVAWV 759
+ +G +L A++ + +G + M Y M TD+ DA+ +K+A G+GTDE +++ L SN + A + +E + + LID++NSE+SG + ++V LLR RDE + + E A QA +LH TF+ ILT +S QV AI AYE+ G SL + GD E+ALL+LL P +A LK AF G+GTD AV R L NDK IA+ Y + +LV+ALK+EL +G+F AV WV
Sbjct: 417 YHSLFGTSLLAEVHDETTGYYRQLMEYALMPTDDLDAMVVKQACDGLGTDETLLVEALAPLSNSRMIALKAKFEAKYGQPLIDRMNSELSGTLRTVIVALLRAVRDEGSAVDSELAANQAEQLHAAGAGRLGTDEETFISILTRASFEQVQAIKAAYERAQGASLESAIRSESRGDAENALLALLRTPHAGYAAALKRAFRGLGTDDAAVARALGSNDKPDVARIADIYLENFGQTLVEALKEEL-SGSFRLAAVTWV 673
BLAST of mRNA_H-paniculata_contig161.3528.1 vs. uniprot
Match: A0A836CML3_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CML3_9STRA) HSP 1 Score: 158 bits (400), Expect = 5.870e-38 Identity = 94/251 (37.45%), Postives = 143/251 (56.97%), Query Frame = 1
Query: 1 FRESYGMTLKAQLEKDMSGDLQTFMVYTQMKTDEFDALQMKKAMAGIGTDEDIMIMMLTTRSNEAIAAARKYYEGCFDESLIDKINSEMSGNFQKLLVTLLRGERDESTEPNVEQAEVQANELHETK-----DPSATFVEILTSSSRAQVAAISDAYEKMHGKSLVKHVTKTFSGDMEDALLSLLFDPIEIFARGLKNAFHGIGTDKEAVCRILAGNDKATCMAIAERYQAKYDASLVDALKKELRAGTFE 738
+ + +L ++ + SG+ + +V + D+FDA+ +K+A G+GT+E I+I +L R+N I + Y+ D LID +NSE+SG F+K++V LL +RDE +V +A QA L + FV T +SRAQ+ AI YEK+ G SL V + SGD+E L++LL++P E +AR L AF G+GTD+ AV R+L DK +A+ Y Y +L +A+K EL +G FE
Sbjct: 287 YHRLFSKSLVDMIKSECSGNYEDLLVGAVLPYDDFDAIMVKRACDGVGTNEQILIELLAPRANARIRGMKLKYDARNDAPLIDHLNSELSGTFKKIIVQLLHAQRDEEGPADVARASAQARALLDAGVGQWGTDEGVFVSTFTRASRAQIQAIKAEYEKLAGHSLRSAVERETSGDVEAVLVALLYEPTEYYARLLHKAFKGMGTDEAAVVRVLTSLDKREMKPVADHYLETYGRTLTEAIKSEL-SGDFE 536
BLAST of mRNA_H-paniculata_contig161.3528.1 vs. uniprot
Match: A0A836CCJ5_9STRA (Annexin n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CCJ5_9STRA) HSP 1 Score: 160 bits (404), Expect = 2.790e-37 Identity = 104/301 (34.55%), Postives = 156/301 (51.83%), Query Frame = 1
Query: 1 FRESYGMTLKAQLEKDMSGDLQTFMVYTQMKTDEFDALQMKKAMAGIGTDEDIMIMMLTTRSNEAIAAARKYYEGCFDESLIDKINSEMSGNFQKLLVTLLRGERDESTEPNVEQAEVQANELHETKDP-----SATFVEILTS-----------------------------SSRAQVAAISDAYEKMHGKSLVKHVTKTFSGDMEDALLSLLFDPIEIFARGLKNAFHGIG---------TDKEAVCRILAGNDKATCMAIAERYQAKYDASLVDALKKELRAGTFEEGAVAWVSSIDP 774
+ + +L +++ + SG Q ++ + DEFDA +KKA G+GT+E ++I L RSN I A + Y+ + LID++NSE+SGNF+K+++ LL +RDE+ PN E A QA LH+ + F +IL SSRA + AI AYE+++G SL K + + SGD+ED L++LL+ P E +AR L A G+G T+ + V R+L +DK IAE Y A Y+ SL + L EL +G F+ A+ WV + DP
Sbjct: 429 YHRLFNKSLAQEIKSETSGHYQDLLMAIVLPYDEFDAAIIKKACDGLGTNEQVLIECLAPRSNGRIRALKAKYDAKHNTPLIDRLNSELSGNFKKIIIALLMADRDENAPPNAELAGRQAQMLHDAGEARWGTDERVFQDILVRIKAPAXXXXXXXXXXXXXXXXXXXXXXXXSSRAHIEAIKSAYERLYGHSLRKAIERETSGDLEDVLVALLYTPTEYYARQLHKACKGMGLQKACKEMRTNDDMVVRVLGSHDKNELALIAEHYLATYNRSLTELLASEL-SGNFKSAALTWVGAPDP 728
BLAST of mRNA_H-paniculata_contig161.3528.1 vs. uniprot
Match: R7TDC5_CAPTE (Annexin n=1 Tax=Capitella teleta TaxID=283909 RepID=R7TDC5_CAPTE) HSP 1 Score: 137 bits (346), Expect = 1.860e-32 Identity = 84/261 (32.18%), Postives = 154/261 (59.00%), Query Frame = 1
Query: 1 FRESYGMTLKAQLEKDMSGDLQTFMVYTQMKTDEFDALQMKKAMAGIGTDEDIMIMMLTTRSNEAIAAARKYYEGCFDESLIDKINSEMSGNFQKLLVTLLRGERDESTEPNVEQAEVQANELHETKDPS-----ATFVEILTSSSRAQVAAISDAYEKMHGKSLVKHVTKTFSGDMEDALLSLLF---DPIEIFARGLKNAFHGIGTDKEAVCRILAGNDKATCMAIAERYQAKYDASLVDALKKELRAGTFEEGAVAWV 759
++ YG L +L+ ++ GD + +V M FDA ++++AM GIGTDE +I +L +R+N+ I ++ YE F+ +L + + SE SG+F++LLV++L R+E E +VE+A+ +A E++E + +TF+ IL+ S Q+ A +AY+++ K + + K FSG+++D LL+++ P FA L + G+GTD++ + R++A + I E ++ Y+ +LVD + ++R G F++ +A V
Sbjct: 52 YKTMYGEDLIDELKSELRGDFEDAVVAIMMPARVFDAHELRRAMKGIGTDEASLIDILCSRTNDEIEEIKELYESEFERNLEEDVQSETSGDFKRLLVSMLNAGREEDGEVDVEKADEEAQEIYEAGEDQWGTDESTFMRILSLRSYTQLRATFEAYQRISDKDMETVIEKEFSGNLKDGLLAIVRYARHPPRYFAIKLYESMKGLGTDEKTLIRVIATRAEVDMQEIKEAFEKIYEKTLVDFIDGDIR-GDFKKVMLAMV 311
BLAST of mRNA_H-paniculata_contig161.3528.1 vs. uniprot
Match: A0A7S0HV11_9EUKA (Annexin (Fragment) n=1 Tax=Phaeocystis antarctica TaxID=33657 RepID=A0A7S0HV11_9EUKA) HSP 1 Score: 135 bits (340), Expect = 2.410e-30 Identity = 91/241 (37.76%), Postives = 135/241 (56.02%), Query Frame = 1
Query: 88 MKTDEFDALQMKKAMAGIGTDEDIMIMMLTTRSNEAIAAARKYYEGCFDESLIDKINSEMSGNFQKLLVTLLRGER----DESTEPNVEQAEVQANELHETKDPS-----ATFVEILTSSSRAQVAAISDAYEKMHGKSLVKHVTKTFSG----DMEDALLSLLFDPIEIFARGLKNAFHGIGTDKEAVCRILAGNDKATCMAIAERYQAKYDASLVDALKKELRAGTFEEGAVAWVSSID 771
+ +E D + AM G+GT E +I L R + AA+ +EG D SL+D++++E+SG+FQ L +TLL+G+R DE E N+E AE A+ LH + + F+E+L + S Q AI++AYE + KSL + FS ++ +ALL+LL DP E +A LK AF G+GT VCRIL DK + IA ++ KY L +K E +G ++ A+AWV+ D
Sbjct: 152 LSEEESDLRLLDLAMDGLGTTEAALIEFLCARPPARVRAAKAKWEGRHDASLVDRLDAELSGHFQTLCLTLLKGQRFVESDEERECNMEAAEEAADSLHASGEGQWGTNEEAFIELLCACSPKQSKAIAEAYENKYDKSLAGMIKSEFSAVFDPNLRNALLALLQDPDEWYAYRLKKAFKGLGTADRTVCRILGCADKQGALKIAAAFENKYAKPLRSMIKSEC-SGDYKRLAIAWVTMPD 391 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig161.3528.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig161.3528.1 >prot_H-paniculata_contig161.3528.1 ID=prot_H-paniculata_contig161.3528.1|Name=mRNA_H-paniculata_contig161.3528.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=652bp MTLKAQLEKDMSGDLQTFMVYTQMKTDEFDALQMKKAMAGIGTDEDIMIMback to top mRNA from alignment at H-paniculata_contig161:33793..48441- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig161.3528.1 ID=mRNA_H-paniculata_contig161.3528.1|Name=mRNA_H-paniculata_contig161.3528.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=14649bp|location=Sequence derived from alignment at H-paniculata_contig161:33793..48441- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig161:33793..48441- >mRNA_H-paniculata_contig161.3528.1 ID=mRNA_H-paniculata_contig161.3528.1|Name=mRNA_H-paniculata_contig161.3528.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=3912bp|location=Sequence derived from alignment at H-paniculata_contig161:33793..48441- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |