mRNA_H-paniculata_contig16077.3520.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig16077.3520.1
Unique NamemRNA_H-paniculata_contig16077.3520.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
BLAST of mRNA_H-paniculata_contig16077.3520.1 vs. uniprot
Match: D7G579_ECTSI (Enoyl-Coenzyme A hydratase/3-hydroxyacyl Coenzyme A dehydrogenase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G579_ECTSI)

HSP 1 Score: 463 bits (1192), Expect = 7.460e-157
Identity = 220/293 (75.09%), Postives = 243/293 (82.94%), Query Frame = 1
Query:    1 PERIMGMHFFSPAHVMPLVECVRGEDTSSNTIAAVMAVTKRLNKVGVLVGNCDGFVGNRMLKWYTDETMFLLEEGASPMEVDRAIKAFGMGMGPLEMSDVAGNDISYLIRKERGLLDPANRDPNERYSSLGDKLVSLGRHGQKTGEAEKAGWYDYESGSRKPLASSEVSKLIDEHREELGRTKRAISAEEIVARCFYPLINEGFRCLEEGIAQHPADIDVVWANGYSWPRWRGGPMFWADEVGASVLAREMARYQRQLPDVSHWQPSPLMLKLAERGDTIGGYYTKTVVTSRL 879
            P  +MGMHFFSPAH+MPLVECVRG D S  TIA VM  TKRL KVGVLVGNCDGFVGNRMLKWYT ET F+LEEGASP+EVDRA+KAFGMGMGPLEMSDVAGNDISYLI+KERGLLDPA R+P+ERY SLGDKLV +GR+GQKTG+    GWYDYE GSRKPL S EV+ LI+ HR+E G   R IS EEIV RCFY LINEGFRCLEEGIA+HP DIDVVW  GY+WP WRGGPMFWADEVGA  L R+MA+YQ  LP+VSHWQPSPL+L+LAE G T+  YY    + SRL
Sbjct:  431 PSSVMGMHFFSPAHMMPLVECVRGADASPLTIAVVMGATKRLKKVGVLVGNCDGFVGNRMLKWYTAETEFMLEEGASPVEVDRAVKAFGMGMGPLEMSDVAGNDISYLIKKERGLLDPAKRNPHERYCSLGDKLVEVGRYGQKTGK----GWYDYEKGSRKPLPSPEVAALIEAHRKETGSRPRKISPEEIVERCFYALINEGFRCLEEGIAEHPDDIDVVWVYGYAWPGWRGGPMFWADEVGARTLVRQMAKYQELLPNVSHWQPSPLLLRLAETGQTVSAYYANKAINSRL 719          
BLAST of mRNA_H-paniculata_contig16077.3520.1 vs. uniprot
Match: A0A835ZCY2_9STRA (Enoyl-CoA hydratase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZCY2_9STRA)

HSP 1 Score: 333 bits (855), Expect = 3.400e-106
Identity = 163/285 (57.19%), Postives = 197/285 (69.12%), Query Frame = 1
Query:    1 PERIMGMHFFSPAHVMPLVECVRGEDTSSNTIAAVMAVTKRLNKVGVLVGNCDGFVGNRMLKWYTDETMFLLEEGASPMEVDRAIKAFGMGMGPLEMSDVAGNDISYLIRKERGLLDPANRDPNERYSSLGDKLVSLGRHGQKTGEAEKAGWYDYESGSRK-----PLASSEVSKLIDEHREELG-RTKRAISAEEIVARCFYPLINEGFRCLEEGIAQHPADIDVVWANGYSWPRWRGGPMFWADEVGASVLAREMARYQRQLPDVSHWQPSPLMLKLAERGDT 837
            P   MGMHFFSPA  MPLVECVRG  +S +TIA  +   KRL KVGVLVGNCDGFVGNRMLK Y DE +F+LEEGA+P ++D  ++ FGM +GPLE SD+AGNDIS+LIRK RGL DPA RDP  RY +LGD L   GR GQK G     GWY Y++G  +     P    EV+ LID HR   G    RAI A+EI  RC  P++NE F  L EGIA  P DIDVVW  GY+WP W+GGPMFWADE+G  V+  ++  Y  + PDV+HW+P+PL+ +L  RG+T
Sbjct:  422 PHACMGMHFFSPAQAMPLVECVRGRASSPHTIATTLGAAKRLGKVGVLVGNCDGFVGNRMLKGYQDEVLFMLEEGATPRQIDTVMRDFGMLLGPLETSDLAGNDISWLIRKARGLTDPARRDPGARYCALGDALCEAGRFGQKVGR----GWYRYDAGDSRSKGKAPQDDPEVAALIDAHRRAHGVAMPRAIVADEIAERCLLPMLNEAFLILGEGIADRPGDIDVVWVYGYAWPVWKGGPMFWADELGLDVVLAKLRAYGARHPDVAHWRPAPLLEELVARGET 702          
BLAST of mRNA_H-paniculata_contig16077.3520.1 vs. uniprot
Match: A0A0D2X5J3_CAPO3 (Enoyl-CoA hydratase n=1 Tax=Capsaspora owczarzaki (strain ATCC 30864) TaxID=595528 RepID=A0A0D2X5J3_CAPO3)

HSP 1 Score: 310 bits (793), Expect = 4.770e-97
Identity = 152/281 (54.09%), Postives = 194/281 (69.04%), Query Frame = 1
Query:    1 PERIMGMHFFSPAHVMPLVECVRGEDTSSNTIAAVMAVTKRLNKVGVLVGNCDGFVGNRMLKWYTDETMFLLEEGASPMEVDRAIKAFGMGMGPLEMSDVAGNDISYLIRKERGLLDPANRDPNE-RYSSLGDKLVSLGRHGQKTGEAEKAGWYDYESGSRKPLASSEVSKLIDEHREELGRTKRAISAEEIVARCFYPLINEGFRCLEEGIAQHPADIDVVWANGYSWPRWRGGPMFWADEVGASVLAREMARYQRQLPDVSHWQPSPLMLKLAERGDTI 840
            PE+ +G HFFSPA+VM L+E VRG+ +S +TIA VMA++K + KVGVLVGNCDGFVGNRML+ Y  E  F+LEEGA P +VD+ + +FGM MGP +M D+AGND+ + IR+ +G+ +PA R   E RY  LGDKL  LGR GQK G    AGWY YE G RK +    V+KLI+ H    G  +R+IS EEI  RC YPLINEGF+ LEEGIA  P DID++WA GY +PR+RGGPM  A  +G   +   +A+Y +Q P   H+ PS L+  LAE   T+
Sbjct:  434 PEQFIGTHFFSPANVMRLLENVRGKKSSPSTIATVMALSKTIKKVGVLVGNCDGFVGNRMLEGYAREASFMLEEGALPAQVDKVLTSFGMAMGPFQMGDLAGNDVGWRIRQGKGMTNPATRPAKEGRYCELGDKLCELGRFGQKAG----AGWYKYEQGQRKAIPDDAVAKLIEAHSSSKGIARRSISDEEIFERCMYPLINEGFKVLEEGIALRPGDIDIIWAYGYGFPRYRGGPMHVAQTIGLKKIYTALAKYSKQFPTSHHFVPSKLLQTLAETNTTL 710          
BLAST of mRNA_H-paniculata_contig16077.3520.1 vs. uniprot
Match: A0A6H5JH35_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JH35_9PHAE)

HSP 1 Score: 292 bits (747), Expect = 4.880e-91
Identity = 149/225 (66.22%), Postives = 167/225 (74.22%), Query Frame = 1
Query:    1 PERIMGMHFFSPAHVMPLVECVRGEDTSSNTIAAVMAVTKRLNKVGVLVGNCDGFVGNRMLKWYTDETMFLLEEGASPMEVDRAIKAFGMGMGPLEMSDVAGNDISYLIRKERGLLDPANRDPNERYSSLGDKLVSLGRHGQKTGEAEKAGWYDYESGSRKPLASSEVSKLIDEHREELGRTKRAISAEEIVARCFYPLINEGFRCLEEGIAQHPADIDVVWANG 675
            P  +MGMHFFSPAH+MPLVECVRG DTS  TIA VM  TKRL KVGVLVGNCDGFVGNRMLKWYT ET F+LEEGASP+EVD A+KAFGMGMGPLEMSDVAGNDISYLI+KERGLLDPA R+P+ERY SLGDKLV +GR+GQKTG+    GWYDYE GSRKPL S EV+ LI+ HR+E GR  +          CF+  +   +              D VW NG
Sbjct:  333 PSSVMGMHFFSPAHMMPLVECVRGADTSPLTIAVVMGATKRLKKVGVLVGNCDGFVGNRMLKWYTAETEFMLEEGASPVEVDWAVKAFGMGMGPLEMSDVAGNDISYLIKKERGLLDPAKRNPHERYCSLGDKLVEVGRYGQKTGK----GWYDYEKGSRKPLPSPEVAALIEAHRKETGRAGKP-------TYCFFLDVKMAY--------------DTVWRNG 532          
BLAST of mRNA_H-paniculata_contig16077.3520.1 vs. uniprot
Match: A0A519ITL0_9GAMM (3-hydroxyacyl-CoA dehydrogenase (Fragment) n=1 Tax=Haliea sp. TaxID=1932666 RepID=A0A519ITL0_9GAMM)

HSP 1 Score: 284 bits (726), Expect = 2.120e-90
Identity = 140/280 (50.00%), Postives = 192/280 (68.57%), Query Frame = 1
Query:    1 PERIMGMHFFSPAHVMPLVECVRGEDTSSNTIAAVMAVTKRLNKVGVLVGNCDGFVGNRMLKWYTDETMFLLEEGASPMEVDRAIKAFGMGMGPLEMSDVAGNDISYLIRKERGLLDPANRDPNERYSSLGDKLVSLGRHGQKTGEAEKAGWYDYESGSRKPLASSEVSKLIDEHREELGRTKRAISAEEIVARCFYPLINEGFRCLEEGIAQHPADIDVVWANGYSWPRWRGGPMFWADEVGASVLAREMARYQRQ-LPDVSHWQPSPLMLKLAERGDT 837
            P+ ++GMHFFSPA+VM L+E VRGE T+ + +A VM++ K++ K  V+ G CDGF+GNRM++ Y+ +  F+L+EGA+P +VDRAI+ FG  MGP  M D+AGNDI + IRK R +       PN  YS   DKL  LGR GQKTG    AGWYDY++G R  + S+ V K+I++HR+ELG T R IS +EIV R  + L+NEG R +E+GIA   +DID+V+  GY +P  RGGPM +AD+VG   +A  M R+Q+    D + W+P+PL+ KLA  G T
Sbjct:  152 PQDVVGMHFFSPANVMKLLEVVRGEKTAKDVLATVMSIGKKIKKTAVVSGVCDGFIGNRMIERYSQQAGFMLDEGATPQQVDRAIEKFGFAMGPFRMGDLAGNDIGWAIRKRRSV-----DTPNMLYSRTADKLCELGRFGQKTG----AGWYDYQAGKRDAIPSALVEKMIEDHRKELGITPRKISDDEIVQRLVFALVNEGARIVEDGIASRASDIDMVYLTGYGFPMHRGGPMMYADQVGLFNVAEAMKRFQKNPRDDAAFWEPAPLLAKLAAEGKT 422          
BLAST of mRNA_H-paniculata_contig16077.3520.1 vs. uniprot
Match: A0A109CWP1_9BURK (Enoyl-CoA hydratase n=4 Tax=Burkholderiales TaxID=80840 RepID=A0A109CWP1_9BURK)

HSP 1 Score: 283 bits (723), Expect = 2.760e-90
Identity = 141/282 (50.00%), Postives = 188/282 (66.67%), Query Frame = 1
Query:    1 PERIMGMHFFSPAHVMPLVECVRGEDTSSNTIAAVMAVTKRLNKVGVLVGNCDGFVGNRMLKWYTDETMFLLEEGASPMEVDRAIKAFGMGMGPLEMSDVAGNDISYLIRKERGLLDPANRDPNERYSSLGDKLVSLGRHGQKTGEAEKAGWYDYESGSRKPLASSEVSKLIDEHREELGRTKRAISAEEIVARCFYPLINEGFRCLEEGIAQHPADIDVVWANGYSWPRWRGGPMFWADEVGASVLAREMARYQRQ-LPDVSHWQPSPLMLKLAERGDTIG 843
            P+ ++GMHFFSPA+VM L+E VRG+ T+ + +A VM V K++ K  V+ G CDGF+GNRM++ Y+ +  FLL+EGA+P +VDRAI+ FG  MGP  M D+AGNDI + IRK R +       P+ +YS   DKL  LGR GQKTG    AGWYDY++G R  + S  V K+I++HR+ELG T R IS EEIV R  Y L+NEG   LE+GIA    DID+V+  GY +P WRGGPM +A++VG   +A  M R+ +    D + WQP+PL+ KL   G   G
Sbjct:  126 PQDVVGMHFFSPANVMKLLEVVRGKHTAKDVLATVMGVAKKIKKTAVVSGVCDGFIGNRMIEQYSRQAGFLLDEGATPQQVDRAIEKFGFAMGPFRMGDLAGNDIGWAIRKRRAV-----EHPDMKYSRTADKLCELGRFGQKTG----AGWYDYQAGKRDAIPSELVDKMIEDHRKELGITPRKISDEEIVQRLVYALVNEGAHILEDGIASKSGDIDMVYLTGYGFPIWRGGPMHYANQVGLFNVAEAMKRFAKNPRDDAAFWQPAPLIRKLVAEGRQFG 398          
BLAST of mRNA_H-paniculata_contig16077.3520.1 vs. uniprot
Match: A0A7X3TZZ1_9BACT (3-hydroxyacyl-CoA dehydrogenase n=1 Tax=Acidobacteria bacterium TaxID=1978231 RepID=A0A7X3TZZ1_9BACT)

HSP 1 Score: 286 bits (731), Expect = 4.590e-90
Identity = 149/281 (53.02%), Postives = 190/281 (67.62%), Query Frame = 1
Query:    1 PERIMGMHFFSPAHVMPLVECVRGEDTSSNTIAAVMAVTKRLNKVGVLVGNCDGFVGNRMLKWYTDETMFLLEEGASPMEVDRAIKAFGMGMGPLEMSDVAGNDISYLIRKERGLLDPANRDPNERYSSLGDKLVSLGRHGQKTGEAEKAGWYDYESGSRKPLASSEVSKLIDEHREELGRTKRAISAEEIVARCFYPLINEGFRCLEEGIAQHPADIDVVWANGYSWPRWRGGPMFWADEVGASVLAREMARYQRQLPDVSHWQPSPLMLKLAERGDTIG 843
            PE ++G HFFSPA+VM L+E VRG+ +S+ TIA VM + +RL KVGVLVG CDGFVGNRML  Y  E  FLLEEGA P +VD  I AFG+ MGP +MSD+AGND+S+ IR+ +     A R P+ RYS + D++  LGR GQKTG    AGWY YE GSR P+    V ++I     E G  +R ++ E+IV RC YPL+NEG R LEEGIA   +DIDVVW +GY +PR+RGGPMFWAD VG   +   M+R   +  +     P+PL+ +LAE+G   G
Sbjct:  238 PESVIGTHFFSPANVMRLMENVRGKQSSARTIATVMQLARRLGKVGVLVGVCDGFVGNRMLAPYLREAEFLLEEGALPQQVDGVIYAFGLPMGPFQMSDLAGNDVSWYIRQRQA----ATRPPDLRYSPIADRICELGRFGQKTG----AGWYRYEPGSRAPVPDPAVEEIIVAAAAEAGIERRPVADEDIVPRCLYPLVNEGARILEEGIALRASDIDVVWMHGYGFPRYRGGPMFWADLVGLRTIYDAMSRLYDEHGE--RLAPAPLLKRLAEQGKGFG 508          
BLAST of mRNA_H-paniculata_contig16077.3520.1 vs. uniprot
Match: A0A2D6T3M8_9PROT (3-hydroxyacyl-CoA dehydrogenase n=1 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A2D6T3M8_9PROT)

HSP 1 Score: 290 bits (741), Expect = 1.520e-89
Identity = 150/278 (53.96%), Postives = 187/278 (67.27%), Query Frame = 1
Query:    1 PERIMGMHFFSPAHVMPLVECVRGEDTSSNTIAAVMAVTKRLNKVGVLVGNCDGFVGNRMLKWYTDETMFLLEEGASPMEVDRAIKAFGMGMGPLEMSDVAGNDISYLIRKERGLLDPANRDPNERYSSLGDKLVSLGRHGQKTGEAEKAGWYDYESGSRKPLASSEVSKLIDEHREELGRTKRAISAEEIVARCFYPLINEGFRCLEEGIAQHPADIDVVWANGYSWPRWRGGPMFWADEVGASVLAREMARY-QRQLPDVSHWQPSPLMLKLAERG 831
            P  ++GMHFFSPA+VM L+E VRG+ T  + IA VM + K++ KV VLVG CDGFVGNRML  Y  E  FLLEEGA P ++DR I  FG+ MGP  M D+AG DI + IRK +     A+R  N+RYS LGDKL  LGR GQKTG    +GWY YE G+R P+   EV K+I E   ELG  +R IS EEI+ARC YPLINEG R LEEG+A   +DID +W NGY +P +RGGPMF+AD+VG   +   + ++   Q P    W+P+PL+ KLA  G
Sbjct:  426 PGSVIGMHFFSPANVMRLLEVVRGDKTDKDVIATVMGLGKKIGKVSVLVGVCDGFVGNRMLHGYLREANFLLEEGALPAQIDRVIYDFGLPMGPFAMGDLAGLDIGWRIRKAKA----ASRPSNQRYSPLGDKLCELGRFGQKTG----SGWYRYEEGNRAPIEDPEVEKIIVETSAELGMERREISDEEILARCIYPLINEGARILEEGMALRASDIDTIWINGYGFPSYRGGPMFYADQVGTKAVYDAIVKFADEQGPQF--WEPAPLLAKLAAEG 693          
BLAST of mRNA_H-paniculata_contig16077.3520.1 vs. uniprot
Match: A0A6A7GB66_9CRUS (Peroxisomal bifunctional enzyme (Fragment) n=1 Tax=Hirondellea gigas TaxID=1518452 RepID=A0A6A7GB66_9CRUS)

HSP 1 Score: 286 bits (732), Expect = 4.230e-89
Identity = 137/287 (47.74%), Postives = 198/287 (68.99%), Query Frame = 1
Query:    1 PERIMGMHFFSPAHVMPLVECVRGEDTSSNTIAAVMAVTKRLNKVGVLVGNCDGFVGNRMLKWYTDETMFLLEEGASPMEVDRAIKAFGMGMGPLEMSDVAGNDISYLIRKERGLLDPANRDPNERYS-SLGDKLVSLGRHGQKTGEAEKAGWYDYESGSRKPLASSEVSKLIDEHREELGRTKRAISAEEIVARCFYPLINEGFRCLEEGIAQHPADIDVVWANGYSWPRWRGGPMFWADEVGASVLAREMARYQRQLPDVSHWQPSPLMLKLAERGDTIGGYYTK 858
            PE+++G HFFSPA+VM L+E VRG  +S  TIA VM + + + KVGVLVGNC  FVGNRML  Y +E   LL+EGA P +VD AI+ FG  MGP +M+D+AGND+S+ IR  +GLLDPANRDPNERY+ S+ D L   GR GQK     + GWYDY  GSR+ +   EV++++ +   + G  ++  ++++I+ RC  P+INEGF+ LEEGIA  P+DIDV+W  GY +PR  GGPM + + +G   +   + +Y    P  S+W+P+PL++++AE G+++  ++ +
Sbjct:  320 PEKVIGTHFFSPANVMLLLENVRGAKSSDETIATVMKMARTIGKVGVLVGNCWAFVGNRMLDRYRNEAWCLLQEGALPSDVDGAIQGFGFPMGPFQMADLAGNDVSWRIRDGKGLLDPANRDPNERYTGSVADALCERGRFGQKV----QKGWYDYPEGSRQGVIPDEVTQIVKDFAAKSGYPQKKWTSQDIIERCMSPMINEGFKILEEGIASRPSDIDVIWIYGYGFPRANGGPMHYGERIGFKRILELVKKYCALDPKTSYWKPAPLLVEIAESGESLQKFWER 602          
BLAST of mRNA_H-paniculata_contig16077.3520.1 vs. uniprot
Match: A0A0G4J7P1_PLABS (Enoyl-CoA hydratase n=1 Tax=Plasmodiophora brassicae TaxID=37360 RepID=A0A0G4J7P1_PLABS)

HSP 1 Score: 287 bits (734), Expect = 3.020e-88
Identity = 150/294 (51.02%), Postives = 196/294 (66.67%), Query Frame = 1
Query:    1 PERIMGMHFFSPAHVMPLVECVRGEDTSSNTIAAVMAVTKRLNKVGVLVGNCDGFVGNRMLKWYTDETMFLLEEGASPMEVDRAIKAFGMGMGPLEMSDVAGNDISYLIRKERGLLDPANRDPNERY-SSLGDKLVSLGRHGQKTGEAEKAGWYDYESGSRKPLASSEVSKLIDEHREELGRTKRA-ISAEEIVARCFYPLINEGFRCLEEGIAQHPADIDVVWANGYSWPRWRGGPMFWADEVGASVLAREMARYQRQLPDVSHWQPSPLMLKLAERGDTIGGYYTKTVVTSR 876
            P  ++G HFFSPA+ M L+E VRG  +S   IA VM + K++ KVGVLVGNC GFVGNR+L+ Y  E  +L+EEGA+  +VD  +  FGM MGP  M D+AGNDI   IRK  GLLDP  R   ERY  +LGD+L  +GR G K G+    GWYDY  G RK   S+EVS +I  +R+E    +R+ IS EEI+ RC YPLINEGFRCLEEGIA  P+DID+VW  GY WP +RGGPM++ADE+G   +   + +Y     +VSHW+PS L+++L E+  T+  Y+     +S+
Sbjct:  434 PASVVGAHFFSPANKMKLLENVRGSASSEVAIATVMQMGKQIKKVGVLVGNCFGFVGNRLLEPYGREAAYLVEEGAAVGQVDGVLFKFGMPMGPFSMGDLAGNDIPLKIRKSLGLLDPKTRPKGERYHGALGDRLCDMGRLGMKVGK----GWYDYGPG-RKRGPSAEVSAMIAAYRKEADIPQRSNISDEEILERCVYPLINEGFRCLEEGIALKPSDIDIVWVYGYGWPAYRGGPMYYADEIGLGTVLAGLNKYSSIHRNVSHWKPSKLLVQLVEQKTTVAAYWAAKSKSSK 722          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig16077.3520.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G579_ECTSI7.460e-15775.09Enoyl-Coenzyme A hydratase/3-hydroxyacyl Coenzyme ... [more]
A0A835ZCY2_9STRA3.400e-10657.19Enoyl-CoA hydratase n=1 Tax=Tribonema minus TaxID=... [more]
A0A0D2X5J3_CAPO34.770e-9754.09Enoyl-CoA hydratase n=1 Tax=Capsaspora owczarzaki ... [more]
A0A6H5JH35_9PHAE4.880e-9166.22Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
A0A519ITL0_9GAMM2.120e-9050.003-hydroxyacyl-CoA dehydrogenase (Fragment) n=1 Tax... [more]
A0A109CWP1_9BURK2.760e-9050.00Enoyl-CoA hydratase n=4 Tax=Burkholderiales TaxID=... [more]
A0A7X3TZZ1_9BACT4.590e-9053.023-hydroxyacyl-CoA dehydrogenase n=1 Tax=Acidobacte... [more]
A0A2D6T3M8_9PROT1.520e-8953.963-hydroxyacyl-CoA dehydrogenase n=1 Tax=Rhodospiri... [more]
A0A6A7GB66_9CRUS4.230e-8947.74Peroxisomal bifunctional enzyme (Fragment) n=1 Tax... [more]
A0A0G4J7P1_PLABS3.020e-8851.02Enoyl-CoA hydratase n=1 Tax=Plasmodiophora brassic... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig16077contigH-paniculata_contig16077:382..3383 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score462.6
Seed ortholog evalue1.3e-127
Seed eggNOG ortholog2880.D7G579
Preferred nameFAO1
Hectar predicted targeting categoryother localisation
EggNOG free text desc.enoyl-CoA hydratase activity
EggNOG OGsCOG1024@1,KOG1683@2759
COG Functional cat.I
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons6
Model size882
Cds size870
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929285.4841475-UTR-H-paniculata_contig16077:381..3931622929285.4841475-UTR-H-paniculata_contig16077:381..393Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig16077 382..393 +
1691480801.1987042-UTR-H-paniculata_contig16077:381..3931691480801.1987042-UTR-H-paniculata_contig16077:381..393Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig16077 382..393 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929285.5005736-CDS-H-paniculata_contig16077:393..5131622929285.5005736-CDS-H-paniculata_contig16077:393..513Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig16077 394..513 +
1691480801.2148724-CDS-H-paniculata_contig16077:393..5131691480801.2148724-CDS-H-paniculata_contig16077:393..513Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig16077 394..513 +
1622929285.5179596-CDS-H-paniculata_contig16077:1020..12171622929285.5179596-CDS-H-paniculata_contig16077:1020..1217Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig16077 1021..1217 +
1691480801.2233498-CDS-H-paniculata_contig16077:1020..12171691480801.2233498-CDS-H-paniculata_contig16077:1020..1217Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig16077 1021..1217 +
1622929285.5346594-CDS-H-paniculata_contig16077:1418..15391622929285.5346594-CDS-H-paniculata_contig16077:1418..1539Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig16077 1419..1539 +
1691480801.2308228-CDS-H-paniculata_contig16077:1418..15391691480801.2308228-CDS-H-paniculata_contig16077:1418..1539Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig16077 1419..1539 +
1622929285.6183107-CDS-H-paniculata_contig16077:1934..20261622929285.6183107-CDS-H-paniculata_contig16077:1934..2026Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig16077 1935..2026 +
1691480801.2383502-CDS-H-paniculata_contig16077:1934..20261691480801.2383502-CDS-H-paniculata_contig16077:1934..2026Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig16077 1935..2026 +
1622929285.6281621-CDS-H-paniculata_contig16077:2460..26711622929285.6281621-CDS-H-paniculata_contig16077:2460..2671Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig16077 2461..2671 +
1691480801.245989-CDS-H-paniculata_contig16077:2460..26711691480801.245989-CDS-H-paniculata_contig16077:2460..2671Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig16077 2461..2671 +
1622929285.6377172-CDS-H-paniculata_contig16077:3254..33831622929285.6377172-CDS-H-paniculata_contig16077:3254..3383Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig16077 3255..3383 +
1691480801.2542903-CDS-H-paniculata_contig16077:3254..33831691480801.2542903-CDS-H-paniculata_contig16077:3254..3383Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig16077 3255..3383 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig16077.3520.1prot_H-paniculata_contig16077.3520.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig16077 394..3383 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig16077.3520.1

>prot_H-paniculata_contig16077.3520.1 ID=prot_H-paniculata_contig16077.3520.1|Name=mRNA_H-paniculata_contig16077.3520.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=290bp
MGMHFFSPAHVMPLVECVRGEDTSSNTIAAVMAVTKRLNKVGVLVGNCDG
FVGNRMLKWYTDETMFLLEEGASPMEVDRAIKAFGMGMGPLEMSDVAGND
ISYLIRKERGLLDPANRDPNERYSSLGDKLVSLGRHGQKTGEAEKAGWYD
YESGSRKPLASSEVSKLIDEHREELGRTKRAISAEEIVARCFYPLINEGF
RCLEEGIAQHPADIDVVWANGYSWPRWRGGPMFWADEVGASVLAREMARY
QRQLPDVSHWQPSPLMLKLAERGDTIGGYYTKTVVTSRL*
back to top

mRNA from alignment at H-paniculata_contig16077:382..3383+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig16077.3520.1 ID=mRNA_H-paniculata_contig16077.3520.1|Name=mRNA_H-paniculata_contig16077.3520.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=3002bp|location=Sequence derived from alignment at H-paniculata_contig16077:382..3383+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
CCGGAACGCATCATGGGGATGCACTTCTTTTCCCCAGCGCATGTGATGCC ACTGGTGGAGTGCGTTCGCGGAGAAGACACGTCCTCGAACACGATAGCTG CGGTTATGGCTGTCACAAAGCGTCTCAACAAGGTGCGTATCGCACGGAAC TGTTTGGATCGCCAAATGCGGTTGCTATTTGACGCAAAAGCCACCTCTGA TACCGCAAGATCGTTCAATAACCACCCCCCTCGCGTTTTCAGGGCAGATT TCTTCAAAAACTGCAGCACCAGTAACACCCAGATTTGTGTCCTAGAAAAT ATTTGTGAAGATGTGTCAATAGACGTGCTTTTGTGGACAGTTGTAGGGTC GTACTTATCGAGGAATAGATTTTGAAACACGTTAACACGTTCGAGGGGGG TGGGTAGGAAACGGTAGTTCAGATTGCCTACATGTATTGGCGCTGTATTT CACGGTGTCGAAGATATCATAGAACACGTTGTACAAGTGGCATGGTACGG TATGGAATGGTATGGGTGTGGCAGTTCCTCCGTAAGTGTGGGGTCTCTAG GCGGCGGGTTGACTTCTTTTTCTAGTGCCGCACCATTCCGATTTTCTTCT TTCCGATGCCATGCCTCATTCAACACGCCTTCGCTTCAGGTTGGGGTTTT GGTGGGCAACTGCGACGGCTTTGTGGGTAATCGTATGCTCAAATGGTATA CGGACGAAACCATGTTTTTGCTGGAAGAAGGCGCGTCGCCGATGGAGGTG GATAGGGCCATCAAGGCGTTCGGCATGGGCATGGGGCCACTCGAAATGTC CGACGTCGCAGGGAACGATATTTCTTATCTCATTAGGTGTGCGGTGTCCA TGCTTCCGTCCTTCGTCCGGTTCACACAAGAAATAGTCAGCGTTGTTTCT CCTCCGAGCTATATGTATATATATATATATATATATATTGTCTTGTTGAG CGTTTTTGGCGACTCGCGACAGAAACAGGAAAATTGACATGTTCGTTACT AAAAATGGTTGTTGCTGGTACCCTTGTACTTGACCAGGAAGGAGAGAGGC TTGCTGGACCCAGCGAATCGCGATCCCAACGAGCGTTACAGTTCGCTAGG GGATAAGCTGGTGTCGCTGGGCCGACATGGGCAAAAGACAGGCGAGGCTG AAAAGGCTGTTGTGCTGCAGTATTTCGTACATAATAGTGATCCCGTAGGT ATTAGAGTTGTTCATACGTCGCTGTAGTTGAGAGGTTGGCGAGTAGCGCA GGGTGTATTTCTCGAGCGCGTTGTGGAAATATCGAGGCGAAGGTGCAAGA GTTTGGTTCGTTGTGTTGTGTGTCGGTAAGAGCTTGTATGGTATTCAGCG AAGTACGATGCAAATGCTTGCAAACGGACGAACTTGGGCTTGTGTGCAGG CGATTTGTTTTCCCCGCGATTTGTAGCAGGCCTCAGGCTTCCTCTTGACA CACGTTTTCTGGTGCGTTTATTTTTGTATCGTTCCCGTGATTGGCTTCTT TCTCTATGCACTTTTACCGTTCGCTTGTTGCCTGCTTACTCTCAATAGGC AAGGGGTGGTATGACTACGAGAGCGGAAGTCGCAAGCCACTGGCCTCGTC GGAGGTCTCTAAGCTCATCGACGAGCATCGTGAGGAACTTGGCAGGTAAT GTACAGTAAGTAGTAGTAGAGTGGTGCGTTCCACCCTCCTTTCGTTTCCC ATATGGTTGTTCTGCCTCACAAGGAGGTTCCATAGTAATTTGCCGTGCTA CGCACAATGCATATTTTAGCTCGGTGTGCCAGCGGTTCATCTGTGGGACT ATTGCACATCCCAAAACTTTGGTGACAAGTATATTATTTTGACAACCTCA GCCCTTGACACGTGTACAGTATGTGTACGTTTGTTGATGGGGTCTGCAGG ATATCGTAAGTTTCTATCATGTGCTGACGCCCTTATTTTATTTGTAGCAG AGCCAGTATTTTCAACCAAGTCAAAACCCTGGTGAAATTTGGTTCATTCG TAACCGCTCCCTATTAAGCCCTTGTATGGTGTCCTGTTTAATATTCACCC GACCATACCCCACTAATACGGTGTATCAGGACAAAACGAGCCATCTCTGC CGAGGAAATTGTGGCTCGCTGCTTCTATCCCCTTATAAACGAAGGATTCC GATGCTTGGAGGAAGGCATCGCGCAACACCCCGCCGACATTGATGTCGTT TGGGCCAATGGGTACTCGTGGCCGCGTTGGAGGGGAGGGCCCATGTTCTG GGCCGATGAAGTGGGAGCGTCAGTGTTGGCGCGGGAAATGGTGAGACGCC GATGTTATGTTGTTTTGGTCAAGTGCTGTCTGGGGTTGGGTTGCACCAGA CCCAGAACATGGGTTCGACGCACGCTTGAGTTTGGTTCTGCTTATCGCAC AGCTAGATGGCTGAATAACAAACACGGGTGAGATGCACAGAGTGTGCCAG CAACGGATGCTGTAGTCCCTGATGAGGTTCGTTGCAAACGGGCCATTTTT TTGTTTGGACGTCTCATTTGTCGTCTGTAAGTGATGAAAATGCAGTGTTT CATGGGCGGGTGACGGTTGGAAAGCTTTTTGAGCGTAGGATCTGATTGCA AACAATTTAAAGTCTTGCCTCGACGATGATGAGCGATATGCAGTAGTCTG GCCCCTACATTCCTGCCGTCTAACAGCGGTTGAGCATGATGTTGTCAGAG CCAGTGTAACTGAATCATTGTAGACTGCGCTACAGTAAATATATCAAGCG TCGCAACGGGCCGTGTATTTTTGATAGCCCCTGACGTCTCAACTTATCCC AAACCGAATATACTGTAATATCCTGTCCTCTGATTCATGGTTAAACCTCC TGCCCAACATGAACAACTGACAGGCAAGGTACCAGCGGCAATTACCGGAT GTGTCACACTGGCAGCCGAGTCCCCTCATGTTGAAGCTGGCCGAGCGAGG AGACACTATTGGCGGCTACTACACGAAGACGGTCGTTACCAGCAGACTGT GA
back to top

Coding sequence (CDS) from alignment at H-paniculata_contig16077:382..3383+

>mRNA_H-paniculata_contig16077.3520.1 ID=mRNA_H-paniculata_contig16077.3520.1|Name=mRNA_H-paniculata_contig16077.3520.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1740bp|location=Sequence derived from alignment at H-paniculata_contig16077:382..3383+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGGGGATGCACTTCTTTTCCCCAGCGCATGTGATGCCACTGGTGGAGTG
CGTTCGCGGAGAAGACACGTCCTCGAACACGATAGCTGCGGTTATGGCTG
TCACAAAGCGTCTCAACAAGATGGGGATGCACTTCTTTTCCCCAGCGCAT
GTGATGCCACTGGTGGAGTGCGTTCGCGGAGAAGACACGTCCTCGAACAC
GATAGCTGCGGTTATGGCTGTCACAAAGCGTCTCAACAAGGTTGGGGTTT
TGGTGGGCAACTGCGACGGCTTTGTGGGTAATCGTATGCTCAAATGGTAT
ACGGACGAAACCATGTTTTTGCTGGAAGAAGGCGCGTCGCCGATGGAGGT
GGATAGGGCCATCAAGGCGTTCGGCATGGGCATGGGGCCACTCGAAATGT
CCGACGTCGCAGGGAACGATATTTCTTATCTCATTAGGTTGGGGTTTTGG
TGGGCAACTGCGACGGCTTTGTGGGTAATCGTATGCTCAAATGGTATACG
GACGAAACCATGTTTTTGCTGGAAGAAGGCGCGTCGCCGATGGAGGTGGA
TAGGGCCATCAAGGCGTTCGGCATGGGCATGGGGCCACTCGAAATGTCCG
ACGTCGCAGGGAACGATATTTCTTATCTCATTAGGAAGGAGAGAGGCTTG
CTGGACCCAGCGAATCGCGATCCCAACGAGCGTTACAGTTCGCTAGGGGA
TAAGCTGGTGTCGCTGGGCCGACATGGGCAAAAGACAGGCGAGGCTGAAA
AGGCTGAAGGAGAGAGGCTTGCTGGACCCAGCGAATCGCGATCCCAACGA
GCGTTACAGTTCGCTAGGGGATAAGCTGGTGTCGCTGGGCCGACATGGGC
AAAAGACAGGCGAGGCTGAAAAGGCTGGGTGGTATGACTACGAGAGCGGA
AGTCGCAAGCCACTGGCCTCGTCGGAGGTCTCTAAGCTCATCGACGAGCA
TCGTGAGGAACTTGGCAGGGGTGGTATGACTACGAGAGCGGAAGTCGCAA
GCCACTGGCCTCGTCGGAGGTCTCTAAGCTCATCGACGAGCATCGTGAGG
AACTTGGCAGGACAAAACGAGCCATCTCTGCCGAGGAAATTGTGGCTCGC
TGCTTCTATCCCCTTATAAACGAAGGATTCCGATGCTTGGAGGAAGGCAT
CGCGCAACACCCCGCCGACATTGATGTCGTTTGGGCCAATGGGTACTCGT
GGCCGCGTTGGAGGGGAGGGCCCATGTTCTGGGCCGATGAAGTGGGAGCG
TCAGTGTTGGCGCGGGAAATGGACAAAACGAGCCATCTCTGCCGAGGAAA
TTGTGGCTCGCTGCTTCTATCCCCTTATAAACGAAGGATTCCGATGCTTG
GAGGAAGGCATCGCGCAACACCCCGCCGACATTGATGTCGTTTGGGCCAA
TGGGTACTCGTGGCCGCGTTGGAGGGGAGGGCCCATGTTCTGGGCCGATG
AAGTGGGAGCGTCAGTGTTGGCGCGGGAAATGGCAAGGTACCAGCGGCAA
TTACCGGATGTGTCACACTGGCAGCCGAGTCCCCTCATGTTGAAGCTGGC
CGAGCGAGGAGACACTATTGGCGGCTACTACACGAAGACGGTCGTTACCA
GCAGACTGTGAGCAAGGTACCAGCGGCAATTACCGGATGTGTCACACTGG
CAGCCGAGTCCCCTCATGTTGAAGCTGGCCGAGCGAGGAGACACTATTGG
CGGCTACTACACGAAGACGGTCGTTACCAGCAGACTGTGA
back to top