mRNA_H-paniculata_contig16071.3518.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig16071.3518.1
Unique NamemRNA_H-paniculata_contig16071.3518.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
[Close]
BLAST of mRNA_H-paniculata_contig16071.3518.1 vs. uniprot
Match: D8LB03_ECTSI (Phosphoinositide phospholipase C n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LB03_ECTSI)

HSP 1 Score: 330 bits (846), Expect = 2.320e-106
Identity = 172/261 (65.90%), Postives = 199/261 (76.25%), Query Frame = 1 
Query:    1 LNIDASNAYIKAMMQEMDENGDGVLQFNEFVELMRALGKRPEVNAP----------------LKRCLRNGNVSRLPSESEKLILRQEQLPLSMFGVFLREVQGEALSDEPKSKSKSKSMRRGS---MTYRQFYNYISSVTFNSAMRPEAENTVYQDMTQPLSHYFIASSHNTYLEGDQLQSNSSVNRYINDLCKGCRCVELDCWDGDDGFPVIYHGYTLTGRIRFADVIQAVKDYAFEKTDYPVILSLENHCSIPQQQKMA 726
            LNI AS++YIK  M+E+D NGDGVLQF EFV LMR LG+RPEV A                 L RC+     +   +E+EKL LRQE +PLS F  FLREVQGE +SDE  ++  S++   GS   ++YR F+NYI SV  NS +  +  + VYQDM+QPLSHY+I+SSHNTYLEGDQLQSNSSVNRYINDLCKGCRCVELDCWDGDDG P+IYHGYTLTGRIRFADVIQAV DYAF+KTDYPVILSLENHCS+PQQQKMA
Sbjct:  166 LNITASSSYIKKKMKEVDFNGDGVLQFKEFVFLMRMLGERPEVEALFLTLLQASREPDPSRYLARCISEDRATDPRTEAEKLQLRQETMPLSTFAWFLREVQGEDVSDERVAELASEATSHGSDSVLSYRAFFNYIGSVNDNSPVDTKTVSEVYQDMSQPLSHYYISSSHNTYLEGDQLQSNSSVNRYINDLCKGCRCVELDCWDGDDGEPLIYHGYTLTGRIRFADVIQAVMDYAFKKTDYPVILSLENHCSLPQQQKMA 426
[Close]
BLAST of mRNA_H-paniculata_contig16071.3518.1 vs. uniprot
Match: A0A836C9T5_9STRA (Phosphoinositide phospholipase C n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C9T5_9STRA)

HSP 1 Score: 239 bits (610), Expect = 1.420e-70
Identity = 133/256 (51.95%), Postives = 169/256 (66.02%), Query Frame = 1 
Query:    1 LNIDASNAYIKAMMQEMDENGDGVLQFNEFVELMRALGKRPEVNAPLKRCLRNGNVSRLPSESEKLILRQEQLPL-------SMFGVFLREVQGEALSDEPKSKSKSKSMRR------GSMTYRQFYNYISSVTFNSAMRPEAENTVYQDMTQPLSHYFIASSHNTYLEGDQLQSNSSVNRYINDLCKGCRCVELDCWDGDDGFPVIYHGYTLTGRIRFADVIQAVKDYAFEKTDYPVILSLENHCSIPQQQKMAA 729
            LN+  S  +IKA + ++D N DGVLQF+EFVELMR L  R E+ + L   L+ G +  +   S + +    ++         S+F  FL ++QGE+LSDE ++               G + Y  F  Y++ +  NSA+    E  VYQDM QPL +Y+ ASSHNTYLEGDQL S +SVNRYI+DL KGCRCVELDCWDG+DG PVIYHG+TLTGRI+F DVI AV ++AF  +D PVILSLENHCSIPQQQ MAA
Sbjct:  177 LNLQLSRKHIKAEISKVDANNDGVLQFDEFVELMRQLSDRRELGS-LWAALKQGQLESIVRGSHETLPLTHEVSYHLLCCGASVFKRFLEDMQGESLSDEEQATQPGGGANAHPTPSDGKLGYPGFVAYMAGLA-NSAVDLAKEKGVYQDMDQPLCNYWCASSHNTYLEGDQLTSPASVNRYISDLSKGCRCVELDCWDGEDGQPVIYHGHTLTGRIKFVDVIMAVHEFAFTSSDMPVILSLENHCSIPQQQIMAA 430
[Close]
BLAST of mRNA_H-paniculata_contig16071.3518.1 vs. uniprot
Match: F6Y1S7_CIOIN (Phosphoinositide phospholipase C n=3 Tax=Ciona intestinalis TaxID=7719 RepID=F6Y1S7_CIOIN)

HSP 1 Score: 198 bits (503), Expect = 2.220e-55
Identity = 112/246 (45.53%), Postives = 155/246 (63.01%), Query Frame = 1 
Query:    1 LNIDASNAYIKAMMQEMDENGDGVLQFNEFVELMRALGKRPEVNAPLKRCLRNGNVSRLPSESEKLILRQEQLPLSMFGVFLREVQGEALSDEPKSKSKSKSMRRGS-MTYRQFYNYISSV---TFNSAMRPEAENTVYQDMTQPLSHYFIASSHNTYLEGDQLQSNSSVNRYINDLCKGCRCVELDCWDGDDGFPVIYHGYTLTGRIRFADVIQAVKDYAFEKTDYPVILSLENHCSIPQQQKMA 726
            LN  A++ YI  ++++ D +GD +L F+EF +  + +  RPEV   L +   + ++   P E  +  LR++Q         L +V  E      KS    +++R    M+   F  ++ S     FN+      E  V+ DMT+PLSHY+IASSHNTYL  DQL   SSV  YI  L +GCRCVELDCWDG+DG P+IYHGYTLT +I FADV++A++DYAF+ +DYPVILS+ENHCS+PQQ+KMA
Sbjct:  156 LNFQATSDYIDRVLKDTDISGDNLLSFDEFSDFFKKISWRPEVER-LYKTYCDADLKLQPKELARF-LREDQ--------GLNDVTEETAMSLVKSFEPDENLRSTHVMSIYGFMYFLLSPHCDVFNAK-----ERKVHMDMTRPLSHYYIASSHNTYLADDQLIGKSSVECYIRALERGCRCVELDCWDGEDGQPIIYHGYTLTSKIAFADVVEAIRDYAFKTSDYPVILSIENHCSVPQQKKMA 386
[Close]
BLAST of mRNA_H-paniculata_contig16071.3518.1 vs. uniprot
Match: A0A0D2U0B6_CAPO3 (Phosphoinositide phospholipase C n=1 Tax=Capsaspora owczarzaki (strain ATCC 30864) TaxID=595528 RepID=A0A0D2U0B6_CAPO3)

HSP 1 Score: 197 bits (501), Expect = 1.860e-54
Identity = 114/250 (45.60%), Postives = 148/250 (59.20%), Query Frame = 1 
Query:    1 LNIDASNAYIKAMMQ--EMDENGDGVLQFNEFVELMRALGKRPEVNAPLKRCLRNGNVSRLPSESEKLILRQEQLPLSMFGVFLREVQGEALSDEP------KSKSKSKSMRRGSMTYRQFYNYISSVTFNSAMRPEAENTVYQDMTQPLSHYFIASSHNTYLEGDQLQSNSSVNRYINDLCKGCRCVELDCWDGDDGFPVIYHGYTLTGRIRFADVIQAVKDYAFEKTDYPVILSLENHCSIPQQQKMA 726
            LN   SN  +K        D+ G   L F+EF    R L  RPE+   L R           S +E L      L L  F  FL   QG A+S         K +   +  +   ++Y   +N+++S T N    P A N +YQDM+QPL+HYF+ASSHNTYL GDQL+S SSV  Y+  L  GCRCVELDCWDG+DG P+IYHG+TLT +I+F+DVI+A+ DYAF  + +PVILS+ENHCS+PQQ+ MA
Sbjct:  313 LNAKVSNKELKKRFAAANSDDKGTKYLDFDEFGAFYRQLTLRPEIEQLLLRY----------SNTEPL-----SLTLDEFRRFLEVEQGMAVSSSDAAALIAKHEPAVEGTKSKLLSYEGLFNFLAS-TDNDLFNP-AHNRIYQDMSQPLTHYFVASSHNTYLLGDQLRSESSVEAYVRALQNGCRCVELDCWDGEDGDPIIYHGHTLTSKIKFSDVIKAIGDYAFATSPFPVILSIENHCSVPQQKVMA 545
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BLAST of mRNA_H-paniculata_contig16071.3518.1 vs. uniprot
Match: A0A7K7VNU0_EUDEL (Phosphoinositide phospholipase C (Fragment) n=1 Tax=Eudromia elegans TaxID=8805 RepID=A0A7K7VNU0_EUDEL)

HSP 1 Score: 189 bits (481), Expect = 2.910e-53
Identity = 109/244 (44.67%), Postives = 146/244 (59.84%), Query Frame = 1 
Query:    1 LNIDASNAYIKAMMQEMDENGDGVLQFNEFVELMRALGKRPEVNAPLKRCLRNGNVSRLPSESEKLILRQ--EQLPLSMFGVFLREVQGEALSDEPKSKSKSKSMRRGSMTYRQFYNYISSVTFNSAMRPEAENTVYQDMTQPLSHYFIASSHNTYLEGDQLQSNSSVNRYINDLCKGCRCVELDCWDGDDGFPVIYHGYTLTGRIRFADVIQAVKDYAFEKTDYPVILSLENHCSIPQQQKMA 726
            +NID  +AY   + QE D +GDG L   E  E  R L +RPE+     RC  +G+   L +E  +  LR+  E+  L      +R      LSD  K        ++  MT   F  Y+ S T    + PE    V+QDM+QPL HYFI+SSHNTYL  +Q+  +SS   Y+  L KGCRCVELDCW+G DG PV+YHG+TLT +I F DVI+++++YAF+++ YPVILSLENHC + QQ  MA
Sbjct:  171 INIDMDDAYAYELFQECDRSGDGRLVERELEEFCRRLLRRPELEELFGRC--SGDDCVLSAEELRDFLREQGEEATLRRARALIR---AHELSDAAK--------QQDLMTLDGFTMYLLS-TDGDILNPE-HTRVHQDMSQPLCHYFISSSHNTYLTRNQIGGSSSTEAYVRVLLKGCRCVELDCWEGSDGEPVVYHGHTLTSKILFRDVIESIREYAFQQSPYPVILSLENHCGLEQQATMA 399
[Close]
BLAST of mRNA_H-paniculata_contig16071.3518.1 vs. uniprot
Match: A0A0L0DIA0_THETB (Phosphoinositide phospholipase C n=1 Tax=Thecamonas trahens ATCC 50062 TaxID=461836 RepID=A0A0L0DIA0_THETB)

HSP 1 Score: 192 bits (487), Expect = 3.130e-53
Identity = 111/242 (45.87%), Postives = 142/242 (58.68%), Query Frame = 1 
Query:    1 LNIDASNAYIKAMMQEMDENGDGVLQFNEFVELMRALGKRPEVNAPLKRCLRNGNVSRLPSESEKLILRQEQLPLSMFGVFLREVQGEALSDEPKSKSKSKSMRRGSMTYRQFYNYISSVTFNSAMRPEAENTVYQDMTQPLSHYFIASSHNTYLEGDQLQSNSSVNRYINDLCKGCRCVELDCWDGDDGFPVIYHGYTLTGRIRFADVIQAVKDYAFEKTDYPVILSLENHCSIPQQQKMA 726
            LN+      +K+   E+D +  G L F EF+  +  L  RPE+NA   +   +GN   L  E  +  L  EQ+ L   GV + +V G   + E    ++        +    F +Y++S   NS   PE +  VYQ+M QPLSHYF+ASSHNTY  GDQL+  SSV  Y   L KGCRCVELDCWDG D  P+IYHG TLT RI+F DVI+ +K +AF  +DYPVILSLENHCS  QQ  MA
Sbjct:   45 LNLTVKKKVLKSKFNEVDVDKSGTLNFTEFMAFLNNLRNRPEINAVFAQY--SGNSDHLTPEQFREFLINEQMEL---GVTVNDVVGLIHTLEGSDSARH-------LYLSGFTSYMTSEVHNSWRAPEHKR-VYQNMDQPLSHYFVASSHNTYCSGDQLKGASSVEMYEYALKKGCRCVELDCWDGPDNEPLIYHGRTLTSRIKFRDVIECIKTHAFAVSDYPVILSLENHCSHAQQAVMA 273
[Close]
BLAST of mRNA_H-paniculata_contig16071.3518.1 vs. uniprot
Match: A0A7S3XN70_HETAK (Phosphoinositide phospholipase C n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XN70_HETAK)

HSP 1 Score: 186 bits (473), Expect = 4.250e-52
Identity = 101/187 (54.01%), Postives = 123/187 (65.78%), Query Frame = 1 
Query:  217 LPLSMFGVFLREVQGEALSDEPKSKSKSKSMRR-------GSMTYRQFYNYISSVTFNSAMRPEAENTVYQDMTQPLSHYFIASSHNTYLEGDQLQSNSSVNRYINDLCKGCRCVELDCWDGDDGF---------PVIYHGYTLTGRIRFADVIQAVKDYAFEKTDYPVILSLENHCSIPQQQKMAA 729
            LPL+   VF R+VQ +A + E   ++    + +        S+ Y  F  Y+     N    P  E  VYQD+ +PLSHY+IASSHNTYLEGDQL+S SSVNRYINDL KGCRCVELDCWDG+ G          P+IYHG+TLT +I F DVIQAV DY+F+ +  P+ILS ENHCSIP QQKMAA
Sbjct:   21 LPLAQAHVFFRDVQKDATAVEGGEEATRALLLKLDPENGGHSLGYEPFCTYLCGGD-NDVHDPRKEAEVYQDLGRPLSHYWIASSHNTYLEGDQLRSASSVNRYINDLSKGCRCVELDCWDGEPGVHGPKGEVPDPIIYHGHTLTKKILFKDVIQAVADYSFQTSPLPIILSFENHCSIPVQQKMAA 206
[Close]
BLAST of mRNA_H-paniculata_contig16071.3518.1 vs. uniprot
Match: A0A485KN29_9STRA (Phosphoinositide phospholipase C n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KN29_9STRA)

HSP 1 Score: 187 bits (476), Expect = 3.000e-51
Identity = 111/237 (46.84%), Postives = 142/237 (59.92%), Query Frame = 1 
Query:   28 IKAMMQEMDENGDGVLQFNEFVELMRALGKRPEVNAPLKRCLRNGNVSRLPSESEKLILRQEQLP---LSMFGVFLREVQGEALSDEPKSKSKSKSMRRGSMTYRQFYNYISSVTFNSA-MRPEAENTVYQDMTQPLSHYFIASSHNTYLEGDQLQSNSSVNRYINDLCKGCRCVELDCWDGDDGFPVIYHGYTLTGRIRFADVIQAVKDYAFEKTDYPVILSLENHCSIPQQQKMA 726
            ++ ++ E+D + DG L F+E+  LM  L  RPE++ PL     NG       E +  ++          ++ G+F +                      G  +  QF  YI+S + N A +   A N   QDMT PLSHYFIASSHNTYLE DQLQSNSSVN YI+ L + CRCVE+DCWDGDDG PV+YHG+TLT RI+FADVI+A+  +AF  + YPVILSLENHCS PQQ  MA
Sbjct:  236 LRRLISEVDADKDGELDFDEYCALMAQLRHRPELD-PLFNPRANGKTHLTTDEFKAFLVANGHTSDDVETIVGLFTQ---------------------NGGCSRSQFRRYITSHSNNWAKLETMALN---QDMTLPLSHYFIASSHNTYLERDQLQSNSSVNMYISALLRNCRCVEIDCWDGDDGQPVVYHGHTLTTRIKFADVIRAIHAHAFVASPYPVILSLENHCSGPQQIIMA 447
[Close]
BLAST of mRNA_H-paniculata_contig16071.3518.1 vs. uniprot
Match: A0A482URU1_9ARCH (Phosphatidylinositol-specific phospholipase C domain-containing protein (Fragment) n=1 Tax=archaeon TaxID=1906665 RepID=A0A482URU1_9ARCH)

HSP 1 Score: 179 bits (455), Expect = 3.640e-51
Identity = 84/135 (62.22%), Postives = 103/135 (76.30%), Query Frame = 1 
Query:  322 MTYRQFYNYISSVTFNSAMRPEAENTVYQDMTQPLSHYFIASSHNTYLEGDQLQSNSSVNRYINDLCKGCRCVELDCWDGDDGFPVIYHGYTLTGRIRFADVIQAVKDYAFEKTDYPVILSLENHCSIPQQQKMA 726
            +TY QF N +++  +      +     YQDMT PLS+Y++ASSHNTYLEGDQL SNSSV RYINDL  GCRCVELDCWDGDDG P+IYHG+T TGRI F DVI+A+ +YAF  + YPV+LS+ENHC + QQ+ MA
Sbjct:   69 ITYTQFLNVMTNYKYCGGYHTQKLQE-YQDMTLPLSYYYMASSHNTYLEGDQLTSNSSVKRYINDLLLGCRCVELDCWDGDDGQPIIYHGFTATGRILFKDVIKAIYEYAFITSPYPVVLSIENHCCLEQQKIMA 202
[Close]
BLAST of mRNA_H-paniculata_contig16071.3518.1 vs. uniprot
Match: UPI001CF494D9 (1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase delta-4-like isoform X1 n=3 Tax=Acropora TaxID=6127 RepID=UPI001CF494D9)

HSP 1 Score: 187 bits (475), Expect = 5.030e-51
Identity = 108/243 (44.44%), Postives = 151/243 (62.14%), Query Frame = 1 
Query:    1 LNIDASNAYIKAMMQEMDENGDGVLQFNEFVELMRALGKRPEVNAPLKRCLRNGNVSRLPSESEKLILRQEQLPLSMFGVFLREVQGEALSDEP-KSKSKSKSMRRGSMTYRQFYNYISSVTFNSAMRPEAENTVYQDMTQPLSHYFIASSHNTYLEGDQLQSNSSVNRYINDLCKGCRCVELDCWDGDDGFPVIYHGYTLTGRIRFADVIQAVKDYAFEKTDYPVILSLENHCSIPQQQKMA 726
            LN+  S + +K   +E++ +GD  L  NEF +  +++  R E+   + +   NG  + +  E  +  L +EQ    M G          L+ EP +S+ K + +    +T     NY+ S T      P A + +YQDM+ PL+ YF+ASSHNTYL  DQL+  SSV+ YIN L KGCRCVELDCWDG++G P+IYHG+TLT +I F DVI+AVK +AFE ++YPVILSLENHCS+P Q+ MA
Sbjct:  168 LNVKMSPSQVKRKFKEVNTDGDAALNKNEFAKFFKSISTRKEIVNLMTKFSTNG--ATMTVEDFQSFLVREQ---GMHGASKEYCLDMILTYEPTESRKKKRELGIDGLT-----NYLRS-TEGDVYNP-AHDEIYQDMSLPLTDYFVASSHNTYLLQDQLKGPSSVDAYINALKKGCRCVELDCWDGENGEPIIYHGHTLTSKILFKDVIEAVKKHAFEVSEYPVILSLENHCSLPNQKIMA 398
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig16071.3518.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LB03_ECTSI2.320e-10665.90Phosphoinositide phospholipase C n=1 Tax=Ectocarpu... [more]
A0A836C9T5_9STRA1.420e-7051.95Phosphoinositide phospholipase C n=1 Tax=Tribonema... [more]
F6Y1S7_CIOIN2.220e-5545.53Phosphoinositide phospholipase C n=3 Tax=Ciona int... [more]
A0A0D2U0B6_CAPO31.860e-5445.60Phosphoinositide phospholipase C n=1 Tax=Capsaspor... [more]
A0A7K7VNU0_EUDEL2.910e-5344.67Phosphoinositide phospholipase C (Fragment) n=1 Ta... [more]
A0A0L0DIA0_THETB3.130e-5345.87Phosphoinositide phospholipase C n=1 Tax=Thecamona... [more]
A0A7S3XN70_HETAK4.250e-5254.01Phosphoinositide phospholipase C n=1 Tax=Heterosig... [more]
A0A485KN29_9STRA3.000e-5146.84Phosphoinositide phospholipase C n=1 Tax=Aphanomyc... [more]
A0A482URU1_9ARCH3.640e-5162.22Phosphatidylinositol-specific phospholipase C doma... [more]
UPI001CF494D95.030e-5144.441-phosphatidylinositol 4,5-bisphosphate phosphodie... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig16071contigH-paniculata_contig16071:436..5307 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score333.6
Seed ortholog evalue7.9e-89
Seed eggNOG ortholog2880.D8LB03
KEGG rclassRC00017,RC00425
KEGG koko:K05857,ko:K19006
KEGG ReactionR03332,R03435,R10952
KEGG Pathwayko00562,ko01100,ko04020,ko04070,ko04919,ko04933,map00562,map01100,map04020,map04070,map04919,map04933
KEGG ModuleM00130
Hectar predicted targeting categoryother localisation
EggNOG free text desc.phosphatidylinositol phospholipase C activity
EggNOG OGsKOG0169@1,KOG0169@2759
EC3.1.4.11
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko04131
Exons6
Model size732
Cds size732
Stop1
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig16071.3518.1prot_H-paniculata_contig16071.3518.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig16071 436..5307 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929285.229604-CDS-H-paniculata_contig16071:435..5711622929285.229604-CDS-H-paniculata_contig16071:435..571Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig16071 436..571 +
1691480801.098987-CDS-H-paniculata_contig16071:435..5711691480801.098987-CDS-H-paniculata_contig16071:435..571Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig16071 436..571 +
1622929285.2466764-CDS-H-paniculata_contig16071:1974..21171622929285.2466764-CDS-H-paniculata_contig16071:1974..2117Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig16071 1975..2117 +
1691480801.1110203-CDS-H-paniculata_contig16071:1974..21171691480801.1110203-CDS-H-paniculata_contig16071:1974..2117Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig16071 1975..2117 +
1622929285.2595334-CDS-H-paniculata_contig16071:3045..31741622929285.2595334-CDS-H-paniculata_contig16071:3045..3174Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig16071 3046..3174 +
1691480801.1220696-CDS-H-paniculata_contig16071:3045..31741691480801.1220696-CDS-H-paniculata_contig16071:3045..3174Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig16071 3046..3174 +
1622929285.2752922-CDS-H-paniculata_contig16071:3943..40381622929285.2752922-CDS-H-paniculata_contig16071:3943..4038Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig16071 3944..4038 +
1691480801.1298518-CDS-H-paniculata_contig16071:3943..40381691480801.1298518-CDS-H-paniculata_contig16071:3943..4038Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig16071 3944..4038 +
1622929285.2878718-CDS-H-paniculata_contig16071:4350..44801622929285.2878718-CDS-H-paniculata_contig16071:4350..4480Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig16071 4351..4480 +
1691480801.137481-CDS-H-paniculata_contig16071:4350..44801691480801.137481-CDS-H-paniculata_contig16071:4350..4480Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig16071 4351..4480 +
1622929285.2996342-CDS-H-paniculata_contig16071:5208..53071622929285.2996342-CDS-H-paniculata_contig16071:5208..5307Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig16071 5209..5307 +
1691480801.144736-CDS-H-paniculata_contig16071:5208..53071691480801.144736-CDS-H-paniculata_contig16071:5208..5307Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig16071 5209..5307 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig16071.3518.1

>prot_H-paniculata_contig16071.3518.1 ID=prot_H-paniculata_contig16071.3518.1|Name=mRNA_H-paniculata_contig16071.3518.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=244bp
LNIDASNAYIKAMMQEMDENGDGVLQFNEFVELMRALGKRPEVNAPLKRC
LRNGNVSRLPSESEKLILRQEQLPLSMFGVFLREVQGEALSDEPKSKSKS
KSMRRGSMTYRQFYNYISSVTFNSAMRPEAENTVYQDMTQPLSHYFIASS
HNTYLEGDQLQSNSSVNRYINDLCKGCRCVELDCWDGDDGFPVIYHGYTL
TGRIRFADVIQAVKDYAFEKTDYPVILSLENHCSIPQQQKMAA*
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mRNA from alignment at H-paniculata_contig16071:436..5307+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig16071.3518.1 ID=mRNA_H-paniculata_contig16071.3518.1|Name=mRNA_H-paniculata_contig16071.3518.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=4872bp|location=Sequence derived from alignment at H-paniculata_contig16071:436..5307+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
CTTAATATCGATGCGAGCAACGCGTACATCAAGGCAATGATGCAGGAGAT
GGATGAAAATGGGGACGGGGTGTTGCAGTTCAACGAGTTCGTGGAGCTTA
TGCGAGCGCTGGGCAAGCGGCCAGAGGTAAATGCGCGTGTTGTAAGGACA
CGTAGTTGTGTCTTCAGTGTATGTTTTGTCGTACCCCCAGCCCACCTGGT
ATTTTGGCTGCGGTCCCCCCGCCAAGAAGGAAAATCTTGTTTTGGTTCGT
GTGATTCTCAACAATTTACGGTGGCGATTAGTGTCATAAGCAGCAGCGGT
TCGTGTATGTAAAAGAGGGTAGGGCCATCCGTTGAGAGTGTGATTTTAAT
ATGGGAAGATTTTGACAAAATCACAAACTAAAATCTTGGATGATTTGACC
GATTTCTCCTTCGGAGGATGGTGCTTTATTGACGTAACGGAGGATATTGA
ACATACTTGTGTGCAAATAATTTCTTTTTAGACACTACACATCGCCATTG
TGTGTCATGTCATGTACGCAGAACCATGTAGAAGCAGCAACGACCACTGC
CGGATGCATCGATCGCATAGGTCGCACGCGAGATTCCATAAAGTCTTCAC
ATATTCGGTAACTAACTACCCGTTTGAAACGAATAATCACATTTACGACC
CCTGAATCCCAATAGCAAAAAAAACAAATATACTTCTCTTGTTTCTCCGG
TACCGTTGATCTTTGACGCTTTTGAGATCGTTGTGTATGCGTGAGGTTTT
ATCTTGCAGCCGATCGATCCGCTGTTCAGCTTTACGTACCCCGTCGGGGG
GGCGAGAATCTAGTGTTAAGGGGTACAACCGTCTAATTAGTCACATAATC
AGAAGGACGACAAAATTAATCGTAAGATGTGTAAAAATATCTACCTCGAG
CTGTGCTTGGTATGATAGAACAATGGTGTTCGCTCTAGATTTCTTCGTCT
CCTCTGCCCAAGCGCGTGTTCATAAGTGTGATCTGTGATACCGCATGACT
TGTTCTATGTATAAGCTACTTGTACGCCATAAAGAGTAATTCGGAGATAG
TTTCGGAGTTTGTGTGTAACCTTGCCCGGAGATCGTGGACGTCGCGCTAT
ACCACGGCCGGGATGCGAGCACGGCCCAAATGTCCATGCCGTGCAAAACG
TACCTCGTATACTATGCCATGTTCCAAAGTGCTGCGGACTCGTTTGTCAT
GCAGCTTCTCTGTATGGTGGCTTTAAACCTATTCCTTTTCTGTCTTGTGC
GTGTGCCGTGGATGAGAACATTAAAGCATATCTGTACTAGCATCGTCATT
TTTTTTTTTTTTTTGTCTCAACTGGAAAACAATGACTATATCTTTTAAGG
GATACGGCTGTAACGCGACTGGTACCGGCTAGCAATATTGCTCTTAATCG
TTTTGCTTCCTGTTGTGACGAATAAACAAGTGACACAGCGAGAGTAACCT
CTGCTCCGTGTACCCTCGGTGCCTTGGAAAGGTGGAAGCGCTGTACCTGA
CGCTGCTCCACGTGAGCCGCGAGAGGAACCCGGGGGAAGCTTTGAAGCGC
TGCCTTCGTAACGGGAACGTGTCGAGATTGCCGTCAGAGTCGGAGAAGTT
GATCCTGCGTCAGGAGCAGCTGCCGCTGTCCATGTTCGGCGTGTTCCTGA
GAGAAGTGCAGGGAGAGGCTTTGTCAGACGAGGTGAGTTCGTTTGTTTTT
TTTACAGTAGCAAATGTTATGAGATGCTGATTGCGAGACGTGACAGTCAT
TGTCTAATGTGACGGTTCCATCCCCAATCCCCGGGTTTATGTAAGGTAGC
CTCAGTTGAGCTGGGAGCAGGAAGGACGGACCGTGTGACCATCCCACCAA
CTGACAGACTTGTATCGAGCCAGGGCTTTTCCTGATGTACAGCAATATAC
AGCTAATACAAGAGGCCAGACCATTGCCAAGGACTACTTGTACCACCCCA
GCCGTACCGCTCTGAGAGTATTGTACAGCATAGTCAGTAACAGGAAACAA
TAACCTACGTGTGTGAGATACTCCGCAATACGCACAGCAGTTATCATCAC
ACACAAATCACACAATTAGTAGAATGACGGAATACAACATAAGAAAACAA
TAGGACATAAGGGGAGAAATTCTGCGTATTTGTACGTGGTGTGTATGTTT
GTTTCAGGCTCGCACGGCATGTACGATGGTGGGTGTGCTGGCTGGACTTG
GATAGTCGATTTTTTCATGTTTCGATTGGTTTCTGTTGTTCCTTTGCGAT
TGATGGCACTCACTTTTTAAATGTGTTGCGTAGTACTGTCGTTGATGACT
GGTGACCTGATGATGGTGCTCGTTTTGTTAATCTTTTTCTGTAAAGTCGT
GCCGTCGATGGATTTTCCGATTGATGAGTGAATTGATGGATTTGTTTTGA
TTGGGTGATTAATTGATTGGTTGATTGAAGGGTTGTGCTGATTGTGCTGT
GGATGTTTCTCAATGTGTGGTTTTACTAATTTTGCTCTCTTTGTTTGGCT
GATCGTGGTGACATGTTGTTGGCTGACGACATGTGGACGTGCGCACGTGG
CAGGAGATAGCGGAGCTTGCACGGAAGCAGTACACGCCTGAGGGAAAGGG
AAAGGGCAAGCCAAAGTCGAAGTCGAAGTCAAAGTCAATGCGCAGGGGCT
CGATGACGTATCGCCAGTTTTACAATTACATTAGCAGCGTCACTTTCAAC
TCTGCTATGCGACCGGAGGCTGAAAACACCGTGTACCAGGTTGGTCGGTC
GGTGCTGTTGGTGTGGTTTGCTTCGTGGTGATGCTCGTGTTGCTGGCGGT
ACTGCACATGGCCCAATTCGAAGACCATCGCGGCGGCCCTGAAAACACGG
AGCGTAGCGAAGTTTTTTTTTTATCTCCCATCCCCACTGAATTTCTATTT
TGATAACCAAGGCATGACGCGTTCTTAATCCCACATACCCTCATATCGGT
ACCCTGTTGCCAGAGTGGGTGTGTGCTCTGTGGAGGCTGGTTCCCCGTGA
ACTTGTATCCTTTGACTGCCGGTCTGAGTGATTATTATGTTAGTGTGGTG
GAGAAAAAATATATGTTGTCTATCTACGAAAAGAACACACGACATGATGT
GTTTCACATGCCCCTCGTCTCCTCTTGTAACGGTTGACCGTGGGTCTGAG
CGATTTTGGAGTCATTTTTACCCGTAAAAAGTATTCTTGTAGAGAATACG
ACGCATCCTTTGGTCCCACAGGCATGTCCTGGGTGATTTCATCTCTGCTT
ATTTCGGGATTTTGTCATTCGTATGCAAAATTAGGTTTTCCAATCGCGAA
TTTGAGCAATTGTAGAAAAACAAATTTCTGACAAATAACGTATATTCTTC
AACTTGTTTGTCCACATTTTTTTGTTGATTAGTGCCCTACTTGGAGTTGT
AATGTTTCGAGACAAAATTCCTTTTTTTTTTTTTTTGGAACGAGATTTGA
CCCAACCTCTGTACCGTATGCCCCCCCCCCGCCCACTTATATACTGTTTT
GGTAATAGGACATGACGCAGCCGTTGTCCCATTACTTCATCGCGTCAAGT
CATAACACCTACCTGGAGGGGGACCAACTTCAGAGCAATTCTTCCGTAAA
CCGGTAATTTGCGGATTTGTACGGATTTGTACGGATTGCTTGAAATATAA
ATAAACTTGAGGTATGGACAAGTAACGTGAGCATGAATGACACTGCTAGA
CGGTCAAATACTATGATTACGGGGTTCGTCTTCGACGCCCGAGGGTGATT
TAGAGAAATCCGGATGATGTCCTGGCTTGGCAATCAATCCGTATGTACGT
AACGCGATCATCACAAGCAGTACATTAGTCTTTTTTCTTTTGTTTTTTAA
CTCTTGCTCGGTGATTTTGTTCCTCCGGTGTGCGACTATTGGGACTTTTT
TTATGAACACGACAGCTATATCAACGATCTCTGTAAAGGATGTCGATGCG
TGGAGCTGGACTGCTGGGACGGAGATGACGGGTTCCCCGTGATATACCAC
GGATACACGCTCACGGGCCGAATCCGATTCGCTGATGTAATCCAGGTCAG
AGTTGTTCATTTTGGTGGCAAACCGAAAGGATTTTAATTACAGTCCAATC
CGATTCCTCCATGATGCCACAAACAACAACCATGTGATTTCTCCTTTCAG
AGTGATTCTAACTGGCTTCTGATGACGCACAGAGTCGGTTGTAATTATGC
GCACGTCGGATATGTCAGATCAGAACAGAACAGAAGAATATGTCGAAGAT
AGTGTGGTATTGAACAGAACGTGTCTGTTCTGTTTTTTTCTGCTCTGTTG
TCTTGATATAGTGTCGAGGATGCTGCTTGATGCGACATGTCCAAAATGTC
TAGAATCTCTATACTGTAAGATTTGATCTCTCTGACGTATGCAATTATGG
CATCATCGTGAGTTTACAGTGTTGATTATTCTCGTCATACCGTGAAACCC
AACGGAGGTAGGTGATGATACTACCGGGGTGTAAACCTTTTCAAGCGTCA
TGATATCTCGAGCGTTACGGTATCACTGCCAAGTAATGACTTGTTATGCC
GTTGGAGGAAGATCTTGCAGAGATGTAGGTCTGTTGGTTGACGGATTGTT
TGTTTTTTTCGACTGCGTAAGGTCTGTCCCCGTTCTCGAAATATTTGCGT
TAGAAAAGCGTTCGTACCTCCGGTGACAGCGATACCTCCGGGATTTACGG
TATTCATGTTCCATGATACGTGACGATGCGTACCGGATTTTGAATTTGTT
TTCCTCCCGGTCGCCACCAATAGGCGGTGAAGGATTACGCATTTGAGAAG
ACGGACTATCCTGTTATCCTCTCCTTGGAGAACCACTGTAGCATTCCGCA
GCAGCAAAAAATGGCAGCGTGA
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Coding sequence (CDS) from alignment at H-paniculata_contig16071:436..5307+

>mRNA_H-paniculata_contig16071.3518.1 ID=mRNA_H-paniculata_contig16071.3518.1|Name=mRNA_H-paniculata_contig16071.3518.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1464bp|location=Sequence derived from alignment at H-paniculata_contig16071:436..5307+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
CTTAATATCGATGCGAGCAACGCGTACATCAAGGCAATGATGCAGGAGAT
GGATGAAAATGGGGACGGGGTGTTGCAGTTCAACGAGTTCGTGGAGCTTA
TGCGAGCGCTGGGCAAGCGGCCAGAGGTAAATGCGCCTTAATATCGATGC
GAGCAACGCGTACATCAAGGCAATGATGCAGGAGATGGATGAAAATGGGG
ACGGGGTGTTGCAGTTCAACGAGTTCGTGGAGCTTATGCGAGCGCTGGGC
AAGCGGCCAGAGGTAAATGCGCCTTTGAAGCGCTGCCTTCGTAACGGGAA
CGTGTCGAGATTGCCGTCAGAGTCGGAGAAGTTGATCCTGCGTCAGGAGC
AGCTGCCGCTGTCCATGTTCGGCGTGTTCCTGAGAGAAGTGCAGGGAGAG
GCTTTGTCAGACGAGCTTTGAAGCGCTGCCTTCGTAACGGGAACGTGTCG
AGATTGCCGTCAGAGTCGGAGAAGTTGATCCTGCGTCAGGAGCAGCTGCC
GCTGTCCATGTTCGGCGTGTTCCTGAGAGAAGTGCAGGGAGAGGCTTTGT
CAGACGAGCCAAAGTCGAAGTCGAAGTCAAAGTCAATGCGCAGGGGCTCG
ATGACGTATCGCCAGTTTTACAATTACATTAGCAGCGTCACTTTCAACTC
TGCTATGCGACCGGAGGCTGAAAACACCGTGTACCAGCCAAAGTCGAAGT
CGAAGTCAAAGTCAATGCGCAGGGGCTCGATGACGTATCGCCAGTTTTAC
AATTACATTAGCAGCGTCACTTTCAACTCTGCTATGCGACCGGAGGCTGA
AAACACCGTGTACCAGGACATGACGCAGCCGTTGTCCCATTACTTCATCG
CGTCAAGTCATAACACCTACCTGGAGGGGGACCAACTTCAGAGCAATTCT
TCCGTAAACCGGACATGACGCAGCCGTTGTCCCATTACTTCATCGCGTCA
AGTCATAACACCTACCTGGAGGGGGACCAACTTCAGAGCAATTCTTCCGT
AAACCGCTATATCAACGATCTCTGTAAAGGATGTCGATGCGTGGAGCTGG
ACTGCTGGGACGGAGATGACGGGTTCCCCGTGATATACCACGGATACACG
CTCACGGGCCGAATCCGATTCGCTGATGTAATCCAGCTATATCAACGATC
TCTGTAAAGGATGTCGATGCGTGGAGCTGGACTGCTGGGACGGAGATGAC
GGGTTCCCCGTGATATACCACGGATACACGCTCACGGGCCGAATCCGATT
CGCTGATGTAATCCAGGCGGTGAAGGATTACGCATTTGAGAAGACGGACT
ATCCTGTTATCCTCTCCTTGGAGAACCACTGTAGCATTCCGCAGCAGCAA
AAAATGGCAGCGTGAGCGGTGAAGGATTACGCATTTGAGAAGACGGACTA
TCCTGTTATCCTCTCCTTGGAGAACCACTGTAGCATTCCGCAGCAGCAAA
AAATGGCAGCGTGA
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