prot_H-paniculata_contig16067.3513.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig16067.3513.1
Unique Nameprot_H-paniculata_contig16067.3513.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length122
Homology
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BLAST of mRNA_H-paniculata_contig16067.3513.1 vs. uniprot
Match: D7G2Z2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2Z2_ECTSI)

HSP 1 Score: 195 bits (495), Expect = 2.990e-61
Identity = 90/119 (75.63%), Postives = 103/119 (86.55%), Query Frame = 0 
Query:    1 MRSNVLAKVVEFCNHHYVEPMKTIPKPIQYGLGVADHVQEWYADFASGLDDEMLFELLLAANYLDLAPLLEICAATVGLRAMNKTPEEVAREFNLTEPFSPEVEKKLREENKWSTEPPV 119
            MRSNV+AKVVEFC HH  +PM  IPKP+Q+G  V DHVQEWY+ F   L DEMLFE+LLAANYLDL+PLLE+CAATVGLRAMNKTPEE+ REFN+ EPFSPEVE+ LR+ENKWSTEPP+
Sbjct:   82 MRSNVVAKVVEFCQHHQTDPMTDIPKPVQFGKTVGDHVQEWYSTFVKALKDEMLFEMLLAANYLDLSPLLELCAATVGLRAMNKTPEEIQREFNIKEPFSPEVERTLRQENKWSTEPPI 200
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BLAST of mRNA_H-paniculata_contig16067.3513.1 vs. uniprot
Match: A0A836CJ49_9STRA (Skp1 family, dimerization domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJ49_9STRA)

HSP 1 Score: 149 bits (376), Expect = 1.690e-43
Identity = 68/119 (57.14%), Postives = 90/119 (75.63%), Query Frame = 0 
Query:    1 MRSNVLAKVVEFCNHHYVEPMKTIPKPIQYGLGVADHVQEWYADFASGLDDEMLFELLLAANYLDLAPLLEICAATVGLRAMNKTPEEVAREFNLTEPFSPEVEKKLREENKWSTEPPV 119
            +R  VLAKVV++C H+  EPM  IP+PI+YG  VADHVQ WYA+F   LD E LFEL+L+ NYLD+ PLL++ +A  GL  MNKTP+E+     + +PF+PEVE++LR+E +WSTEPPV
Sbjct:   58 VRGPVLAKVVDYCVHYQTEPMTEIPRPIKYGRTVADHVQPWYAEFVDALDKETLFELILSCNYLDVKPLLDLTSAVAGLMLMNKTPDEIRATLGIEQPFAPEVERQLRDEIRWSTEPPV 176
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BLAST of mRNA_H-paniculata_contig16067.3513.1 vs. uniprot
Match: A0A7S3XK24_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XK24_HETAK)

HSP 1 Score: 143 bits (360), Expect = 1.430e-40
Identity = 70/125 (56.00%), Postives = 91/125 (72.80%), Query Frame = 0 
Query:    1 MRSNVLAKVVEFCNHHYVEPMKTIPKPIQYGLGVADHVQEWYADFASGL----DDEMLFELLLAANYLDLAPLLEICAATVGLRAMNKTPEEVAREFNLTEPFSPEVEKKLREENKWSTEPPVSR 121
            ++S VL KV+EFC H++ E M  IP+PI+YGL VAD VQ+WY  F   L    + EMLF+L+LAANYLD+ PLL++  ATVGL  MNKTP+++   F + E FSPE+  +L +ENKWSTEPPV R
Sbjct:   83 LKSPVLVKVIEFCKHYHKEKMARIPEPIKYGLQVADVVQDWYGQFVDDLVSKKEFEMLFDLILAANYLDIKPLLDLTCATVGLLMMNKTPDQIREAFGIDEEFSPELYDQLLKENKWSTEPPVER 207
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BLAST of mRNA_H-paniculata_contig16067.3513.1 vs. uniprot
Match: A0A7S3UW02_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UW02_HETAK)

HSP 1 Score: 136 bits (343), Expect = 5.580e-38
Identity = 65/125 (52.00%), Postives = 92/125 (73.60%), Query Frame = 0 
Query:    1 MRSNVLAKVVEFCNHHYVEPMKTIPKPIQYGLGVADHVQEWYADFASGL----DDEMLFELLLAANYLDLAPLLEICAATVGLRAMNKTPEEVAREFNLTEPFSPEVEKKLREENKWSTEPPVSR 121
            ++SNVL KV+EFC +++ + M TIP+PI+YGL VAD VQ+WY ++   L    + EMLF+L+LAANYLD+  LL++ +AT+GL  MNKTP+++     L E FSPE+ ++L +E KWSTEP V R
Sbjct:   85 LKSNVLVKVIEFCKYYHKDKMATIPRPIKYGLQVADVVQDWYGEYVDALVNNKEFEMLFDLVLAANYLDIKSLLDLASATIGLLIMNKTPDQIRETLGLDEEFSPEMHEQLMQEMKWSTEPAVPR 209
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BLAST of mRNA_H-paniculata_contig16067.3513.1 vs. uniprot
Match: A0A4D9D5I6_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D5I6_9STRA)

HSP 1 Score: 124 bits (310), Expect = 1.550e-33
Identity = 59/113 (52.21%), Postives = 83/113 (73.45%), Query Frame = 0 
Query:    1 MRSNVLAKVVEFCNHHYVEPMKTIPKPIQYGLGVADHVQEWYADFASGLDDEMLFELLLAANYLDLAPLLEICAATVGLRAMNKTPEEVAREFNLTEPFSPEVEKKLREENKW 113
            +++NVLAKV+EFC HH  +PM  I KP++    + + VQ+WYA+F + +D E+LFEL+LAANY+D+ PLL++  ATV      KTPEE+ R FN+T  F+PE E ++REENKW
Sbjct:   58 VKNNVLAKVIEFCKHHKEDPMNDIEKPLK-SANMHEVVQDWYANFVN-VDQELLFELILAANYMDIKPLLDLTCATVASMIKGKTPEEIRRTFNITNDFTPEEEAQVREENKW 168
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BLAST of mRNA_H-paniculata_contig16067.3513.1 vs. uniprot
Match: A0A7S2EKS6_TRICV (Hypothetical protein n=2 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2EKS6_TRICV)

HSP 1 Score: 124 bits (312), Expect = 2.360e-33
Identity = 61/116 (52.59%), Postives = 84/116 (72.41%), Query Frame = 0 
Query:    1 MRSNVLAKVVEFCNHHYVEPMKTIPKPIQYGLGVADHVQEWYADFASGLDDEMLFELLLAANYLDLAPLLEICAATVGLRAMNKTPEEVAREFNLTEPFSPEVEKKLREENKWSTE 116
            +++ VLAKV+EFC HH  EPM  I KP++  + +AD VQ+WYADF + ++  +LFEL+LAANY+D+ PLL++  ATV      KTPEE+ + FN+T  FSPE E ++REENKW  E
Sbjct:  102 VKATVLAKVIEFCKHHQSEPMTEIEKPLKSAV-MADVVQKWYADFVN-VEQVLLFELILAANYMDIKPLLDLTCATVASMIKGKTPEEIRKTFNITNDFSPEEEAQVREENKWCEE 215
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BLAST of mRNA_H-paniculata_contig16067.3513.1 vs. uniprot
Match: A0A7S4EHL7_9STRA (Hypothetical protein n=1 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A7S4EHL7_9STRA)

HSP 1 Score: 123 bits (309), Expect = 3.160e-33
Identity = 61/116 (52.59%), Postives = 81/116 (69.83%), Query Frame = 0 
Query:    1 MRSNVLAKVVEFCNHHYVEPMKTIPKPIQYGLGVADHVQEWYADFASGLDDEMLFELLLAANYLDLAPLLEICAATVGLRAMNKTPEEVAREFNLTEPFSPEVEKKLREENKWSTE 116
            ++S+VL KV+EFC HH  EPM  I KP++    +AD VQ+WYADF   L+  +LFEL+LAANY+D+ PLL++  ATV      KTP+E+   FN+T  FSPE E ++REENKW  E
Sbjct:   74 VKSDVLKKVIEFCEHHLAEPMTEIEKPLK-SQSMADVVQKWYADFVD-LEQVLLFELILAANYMDIKPLLDLTCATVASMIKGKTPDEIRATFNITNDFSPEEEARVREENKWCEE 187
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BLAST of mRNA_H-paniculata_contig16067.3513.1 vs. uniprot
Match: B8CEN5_THAPS (Uncharacterized protein (Fragment) n=2 Tax=Thalassiosira TaxID=35127 RepID=B8CEN5_THAPS)

HSP 1 Score: 122 bits (306), Expect = 3.640e-33
Identity = 60/117 (51.28%), Postives = 82/117 (70.09%), Query Frame = 0 
Query:    1 MRSNVLAKVVEFCNHHYVEPMKTIPKPIQYGLGVADHVQEWYADFASGLDDEMLFELLLAANYLDLAPLLEICAATVGLRAMNKTPEEVAREFNLTEPFSPEVEKKLREENKWSTEP 117
            ++S VL KV+EFC HH  EPM  I KP++    +A+ VQ+WYADF + ++  +LFEL+LAANY+D+ PLL++  ATV      KTPEE+ + FN+   FSPE E ++REENKW  EP
Sbjct:   42 VKSTVLKKVIEFCKHHRSEPMTEIEKPLK-SAAMAEVVQKWYADFVN-VEQVLLFELILAANYMDIKPLLDLTCATVASMIKGKTPEEIRKTFNIANDFSPEEEAQVREENKWCEEP 156
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BLAST of mRNA_H-paniculata_contig16067.3513.1 vs. uniprot
Match: A0A1E7EVM1_9STRA (Skp1-like protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7EVM1_9STRA)

HSP 1 Score: 122 bits (307), Expect = 7.260e-33
Identity = 61/116 (52.59%), Postives = 80/116 (68.97%), Query Frame = 0 
Query:    1 MRSNVLAKVVEFCNHHYVEPMKTIPKPIQYGLGVADHVQEWYADFASGLDDEMLFELLLAANYLDLAPLLEICAATVGLRAMNKTPEEVAREFNLTEPFSPEVEKKLREENKWSTE 116
            ++S VL KV+EFC HH  EPM  I KP++    +AD VQ+WYADF   L+  +LFEL+LAANY+D+ PLL++  ATV      KTP+E+   FN+T  FSPE E ++REENKW  E
Sbjct:   79 VKSEVLKKVIEFCEHHLAEPMTEIEKPLK-SQNMADVVQKWYADFVD-LEQVLLFELILAANYMDIKPLLDLTCATVASMIKGKTPDEIRATFNITNDFSPEEEAQVREENKWCEE 192
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BLAST of mRNA_H-paniculata_contig16067.3513.1 vs. uniprot
Match: A0A7S0TDE4_9STRA (Hypothetical protein n=6 Tax=Bacillariophyta TaxID=2836 RepID=A0A7S0TDE4_9STRA)

HSP 1 Score: 120 bits (302), Expect = 9.530e-33
Identity = 59/117 (50.43%), Postives = 84/117 (71.79%), Query Frame = 0 
Query:    1 MRSNVLAKVVEFCNHHYVEPMKTIPKPIQYGLGVADHVQEWYADFASGLDDEMLFELLLAANYLDLAPLLEICAATVGLRAMNKTPEEVAREFNLTEPFSPEVEKKLREENKWSTEP 117
            +++ VL KV+EFC+HH  EPM  I KP++  + +A+ VQ+WYADF + ++  +LFEL+LAANY+D+ PLL++  ATV      KTPEE+ + FN+   FSPE E ++REENKW  EP
Sbjct:   27 VKAAVLKKVIEFCSHHKSEPMTEIEKPLKSAV-MAEVVQKWYADFVN-VEQVLLFELILAANYMDIKPLLDLTCATVASMIKGKTPEEIRKTFNIANDFSPEEEAQVREENKWCEEP 141
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig16067.3513.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G2Z2_ECTSI2.990e-6175.63Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A836CJ49_9STRA1.690e-4357.14Skp1 family, dimerization domain-containing protei... [more]
A0A7S3XK24_HETAK1.430e-4056.00Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S3UW02_HETAK5.580e-3852.00Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A4D9D5I6_9STRA1.550e-3352.21Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]
A0A7S2EKS6_TRICV2.360e-3352.59Hypothetical protein n=2 Tax=Trieres chinensis Tax... [more]
A0A7S4EHL7_9STRA3.160e-3352.59Hypothetical protein n=1 Tax=Pseudo-nitzschia aust... [more]
B8CEN5_THAPS3.640e-3351.28Uncharacterized protein (Fragment) n=2 Tax=Thalass... [more]
A0A1E7EVM1_9STRA7.260e-3352.59Skp1-like protein n=1 Tax=Fragilariopsis cylindrus... [more]
A0A7S0TDE4_9STRA9.530e-3350.43Hypothetical protein n=6 Tax=Bacillariophyta TaxID... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.30.710.10coord: 1..116
e-value: 7.2E-30
score: 106.0
NoneNo IPR availablePANTHERPTHR11165SKP1coord: 3..115
NoneNo IPR availablePANTHERPTHR11165:SF96SKP1-LIKE PROTEIN 14-RELATEDcoord: 3..115
IPR016072SKP1 component, dimerisationPFAMPF01466Skp1coord: 68..113
e-value: 6.2E-13
score: 48.7
IPR016897S-phase kinase-associated protein 1PIRSFPIRSF028729SCF_Skpcoord: 1..117
e-value: 3.8E-27
score: 92.8
IPR036296SKP1-like, dimerisation domain superfamilySUPERFAMILY81382Skp1 dimerisation domain-likecoord: 39..113

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig16067contigH-paniculata_contig16067:2884..4044 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig16067.3513.1mRNA_H-paniculata_contig16067.3513.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig16067 1026..4086 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig16067.3513.1 ID=prot_H-paniculata_contig16067.3513.1|Name=mRNA_H-paniculata_contig16067.3513.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=122bp
MRSNVLAKVVEFCNHHYVEPMKTIPKPIQYGLGVADHVQEWYADFASGLD
DEMLFELLLAANYLDLAPLLEICAATVGLRAMNKTPEEVAREFNLTEPFS
PEVEKKLREENKWSTEPPVSR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR016072Skp1_comp_dimer
IPR016897SKP1
IPR036296SKP1-like_dim_sf