mRNA_H-paniculata_contig16066.3512.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig16066.3512.1 vs. uniprot
Match: D8LT02_ECTSI (Dimethylargininase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LT02_ECTSI) HSP 1 Score: 154 bits (390), Expect = 2.220e-44 Identity = 75/102 (73.53%), Postives = 85/102 (83.33%), Query Frame = 1
Query: 31 AIDFELAAQQHDEYVSALSKIVDSVETIPSAEEYPDCPFVEDTVVYARGTAVTLRQGHESRRGEVDAVIEALKTRPSLKSINMVHMEDPEALCDGGDVLFTG 336
AID+ LA++QH YV ALSKIVDSVE +P+ E +PDCPFVED VVYARG AVTLRQGH+SR GEVDAV EAL T P+LK + VHMEDP+A CDGGDVLFTG
Sbjct: 39 AIDWALASKQHAGYVDALSKIVDSVEALPALEAHPDCPFVEDAVVYARGIAVTLRQGHDSRIGEVDAVREALATNPALKCVKTVHMEDPDARCDGGDVLFTG 140
BLAST of mRNA_H-paniculata_contig16066.3512.1 vs. uniprot
Match: A0A835YN07_9STRA (Dimethylargininase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YN07_9STRA) HSP 1 Score: 103 bits (257), Expect = 1.600e-24 Identity = 57/105 (54.29%), Postives = 66/105 (62.86%), Query Frame = 1
Query: 34 IDFELAAQQHDEYVSALSKIVDSVETIPSAEEYPDCPFVEDTVVYARGTAVTLRQGHESRRGEVDAVIEALKTRPSLKS----INMVHMEDPEALCDGGDVLFTG 336
ID LA QQ YVSAL K+VD+V IP+ + YPDCPF+EDTVV ARGTAV R GH SR GEV AV + KT + + D EA DGGDVL+TG
Sbjct: 33 IDVALAKQQWQGYVSALRKLVDTVHVIPADDAYPDCPFIEDTVVCARGTAVLTRPGHPSRMGEVQAVGDWFKTAEEYAEGALQLQTLAELDAEATLDGGDVLYTG 137
BLAST of mRNA_H-paniculata_contig16066.3512.1 vs. uniprot
Match: B8CD40_THAPS (Dimethylargininase (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8CD40_THAPS) HSP 1 Score: 84.3 bits (207), Expect = 2.310e-17 Identity = 47/113 (41.59%), Postives = 66/113 (58.41%), Query Frame = 1
Query: 16 GSSVAAIDFELAAQQHDEYVSALSKIVDSVETIPSAEEYPDCPFVEDTVVYARGTAVTLRQGHESRRGEVDAVIEALKTRPSLKSINMVHMEDPE------ALCDGGDVLFTG 336
G+S + +L+ QQHD+Y++ L K + ++ +P +PDC FVED+VV TAV + GH SRR EVD++ E L +M ++ E ALCDGGDVLFTG
Sbjct: 23 GASSEDVSLDLSRQQHDKYLAELRKHIPTL-CLPPLPNHPDCLFVEDSVVAIGDTAVITQMGHPSRRREVDSIKEVLHQLGMKNMYDMREKDEKEHHVGEMALCDGGDVLFTG 134
BLAST of mRNA_H-paniculata_contig16066.3512.1 vs. uniprot
Match: UPI000CF7DC98 (N(G),N(G)-dimethylarginine dimethylaminohydrolase 1 isoform X2 n=1 Tax=Oryzias melastigma TaxID=30732 RepID=UPI000CF7DC98) HSP 1 Score: 83.6 bits (205), Expect = 2.330e-17 Identity = 50/107 (46.73%), Postives = 65/107 (60.75%), Query Frame = 1
Query: 19 SSVAAIDFELAAQQHDEYVSAL-SKIVDSVETIPSAEEYPDCPFVEDTVVYARGTAVTLRQGHESRRGEVDAVIEALKTRPSLKSINMVHMEDPEALCDGGDVLFTG 336
+S A +D + A +HD YV L +++ V +P+ E PDC FVED V TA+ R G ESRRGE +A+ EALK LK +N+V + D A DGGDVLFTG
Sbjct: 30 TSQAEVDLDKARGEHDAYVQVLRTRLGLEVVELPADEALPDCVFVEDAAVVCGDTALITRPGAESRRGETEAMKEALK---DLK-MNIVEITDENATLDGGDVLFTG 132
BLAST of mRNA_H-paniculata_contig16066.3512.1 vs. uniprot
Match: A0A2I4CFR3_9TELE (Dimethylargininase n=1 Tax=Austrofundulus limnaeus TaxID=52670 RepID=A0A2I4CFR3_9TELE) HSP 1 Score: 84.7 bits (208), Expect = 6.240e-17 Identity = 48/107 (44.86%), Postives = 64/107 (59.81%), Query Frame = 1
Query: 19 SSVAAIDFELAAQQHDEYVSAL-SKIVDSVETIPSAEEYPDCPFVEDTVVYARGTAVTLRQGHESRRGEVDAVIEALKTRPSLKSINMVHMEDPEALCDGGDVLFTG 336
SS A +D + A ++HD Y L +++ V +P+ E PDC FVED V TA+ R G ESRRGE +A+ EALK ++N+V M + A DGGDVLFTG
Sbjct: 187 SSQAEVDLDAARREHDAYAEVLRTRLGLEVVELPADETLPDCVFVEDVAVVCGETALITRPGAESRRGETEAMREALKNL----NLNIVEMTEENATLDGGDVLFTG 289
BLAST of mRNA_H-paniculata_contig16066.3512.1 vs. uniprot
Match: A0A8C6TER7_9GOBI (Dimethylargininase n=2 Tax=Gobiidae TaxID=8220 RepID=A0A8C6TER7_9GOBI) HSP 1 Score: 82.8 bits (203), Expect = 9.420e-17 Identity = 49/107 (45.79%), Postives = 62/107 (57.94%), Query Frame = 1
Query: 19 SSVAAIDFELAAQQHDEYVSAL-SKIVDSVETIPSAEEYPDCPFVEDTVVYARGTAVTLRQGHESRRGEVDAVIEALKTRPSLKSINMVHMEDPEALCDGGDVLFTG 336
SS + +D A Q+H EYV L +++ V +P+ E PDC FVED V TA+ R G SRRGE +A+ EALK +N+V M D A DGGDVLFTG
Sbjct: 30 SSQSEVDLAKAHQEHAEYVEVLRTRLGLEVVELPADEALPDCVFVEDAAVVCGDTALITRPGAVSRRGETEAMKEALKKL----DLNLVEMTDENATLDGGDVLFTG 132
BLAST of mRNA_H-paniculata_contig16066.3512.1 vs. uniprot
Match: A0A4Y2TG27_ARAVE (Dimethylargininase n=1 Tax=Araneus ventricosus TaxID=182803 RepID=A0A4Y2TG27_ARAVE) HSP 1 Score: 78.6 bits (192), Expect = 4.880e-16 Identity = 44/101 (43.56%), Postives = 57/101 (56.44%), Query Frame = 1
Query: 34 IDFELAAQQHDEYVSALSKIVDSVETIPSAEEYPDCPFVEDTVVYARGTAVTLRQGHESRRGEVDAVIEALKTRPSLKSINMVHMEDPEALCDGGDVLFTG 336
ID LA +QH+E L + V +P E PDC FVEDT + GTA+ R G +R+ EVD V LK L +V + +PEA+ DGGD+LFTG
Sbjct: 29 IDLPLARKQHEELRKVLRDLGVDVIELPPDESQPDCVFVEDTAIVCNGTALICRPGLPTRQKEVDIVRSILKKDMELP---IVDIANPEAMVDGGDILFTG 126
BLAST of mRNA_H-paniculata_contig16066.3512.1 vs. uniprot
Match: D8QPQ2_SELML (Dimethylargininase n=6 Tax=Selaginella moellendorffii TaxID=88036 RepID=D8QPQ2_SELML) HSP 1 Score: 80.9 bits (198), Expect = 6.040e-16 Identity = 46/106 (43.40%), Postives = 62/106 (58.49%), Query Frame = 1
Query: 22 SVAAIDFELAAQQHDEYVSAL--SKIVDSVETIPSAEEYPDCPFVEDTVVYARGTAVTLRQGHESRRGEVDAVIEALKTRPSLKSINM-VHMEDPEALCDGGDVLF 330
S AAID ELA +QH +YV+ L S +VD V + +E+PDCPF+EDT V A+ R G RRGEV+AV L+++ +H +P DGGDVL+
Sbjct: 57 SEAAIDVELARKQHSDYVNILRGSLLVDHVVELSPMDEFPDCPFIEDTAVVIGSKALITRPGASLRRGEVEAV------EAELRNLGFEIHNVEPPGTIDGGDVLY 156
BLAST of mRNA_H-paniculata_contig16066.3512.1 vs. uniprot
Match: A0A6J8BDV6_MYTCO (Dimethylargininase n=1 Tax=Mytilus coruscus TaxID=42192 RepID=A0A6J8BDV6_MYTCO) HSP 1 Score: 80.1 bits (196), Expect = 1.070e-15 Identity = 41/103 (39.81%), Postives = 61/103 (59.22%), Query Frame = 1
Query: 28 AAIDFELAAQQHDEYVSALSKIVDSVETIPSAEEYPDCPFVEDTVVYARGTAVTLRQGHESRRGEVDAVIEALKTRPSLKSINMVHMEDPEALCDGGDVLFTG 336
A ID E A ++H + V L K + EEYP+CPFV+D VV TA+ R G ++R+GEV + L+++ + +V + DP+A+ +GGDVLFTG
Sbjct: 35 AEIDMEKARKEHKDLVETLKKCDVRTIELDGTEEYPECPFVDDCVVAIGNTALITRPGSKTRQGEVSEIRRYLQSQMKM---TIVEIRDPDAIVEGGDVLFTG 134
BLAST of mRNA_H-paniculata_contig16066.3512.1 vs. uniprot
Match: A0A8B6D255_MYTGA (Dimethylargininase n=2 Tax=Mytilus TaxID=6548 RepID=A0A8B6D255_MYTGA) HSP 1 Score: 79.7 bits (195), Expect = 1.720e-15 Identity = 40/103 (38.83%), Postives = 61/103 (59.22%), Query Frame = 1
Query: 28 AAIDFELAAQQHDEYVSALSKIVDSVETIPSAEEYPDCPFVEDTVVYARGTAVTLRQGHESRRGEVDAVIEALKTRPSLKSINMVHMEDPEALCDGGDVLFTG 336
A +D E A ++H + V L K + EEYP+CPFV+D VV TA+ R G ++R+GEV + L+++ + +V + DP+A+ +GGDVLFTG
Sbjct: 35 AEVDMEKARKEHKDLVETLKKCDVRTIELDGTEEYPECPFVDDCVVAIGNTALITRPGSKTRQGEVSEIRRYLQSQMKM---TIVEIRDPDAIVEGGDVLFTG 134 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig16066.3512.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig16066.3512.1 >prot_H-paniculata_contig16066.3512.1 ID=prot_H-paniculata_contig16066.3512.1|Name=mRNA_H-paniculata_contig16066.3512.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=112bp MNTGRGSSVAAIDFELAAQQHDEYVSALSKIVDSVETIPSAEEYPDCPFVback to top mRNA from alignment at H-paniculata_contig16066:898..5824+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig16066.3512.1 ID=mRNA_H-paniculata_contig16066.3512.1|Name=mRNA_H-paniculata_contig16066.3512.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=4927bp|location=Sequence derived from alignment at H-paniculata_contig16066:898..5824+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig16066:898..5824+ >mRNA_H-paniculata_contig16066.3512.1 ID=mRNA_H-paniculata_contig16066.3512.1|Name=mRNA_H-paniculata_contig16066.3512.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=672bp|location=Sequence derived from alignment at H-paniculata_contig16066:898..5824+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |