prot_H-paniculata_contig1604.3505.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig1604.3505.1
Unique Nameprot_H-paniculata_contig1604.3505.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length122
Homology
BLAST of mRNA_H-paniculata_contig1604.3505.1 vs. uniprot
Match: D7FMF5_ECTSI (FYVE-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMF5_ECTSI)

HSP 1 Score: 209 bits (531), Expect = 3.520e-60
Identity = 96/115 (83.48%), Postives = 107/115 (93.04%), Query Frame = 0
Query:    1 MVLEGYLSRFLVDRFGRYVKGLDAENLRLSAWKGEVLLNGLQLIPEALTEEVDLPVDVKWGHIGLFHLSIPWSKLGSKPVRVTLEDVYFLVSPLDTWGMDDMERQRRARYQKSTG 115
            MVLEGYLSRFLV+RFGRYVKGLDAENLRLSAWKGE+LL GLQL+PEAL+E +D+PV+VKWGH+GLF LS+PW+KLGSKPV  TLEDVY LV+PLDTW MDDMERQRRARYQKS G
Sbjct:   37 MVLEGYLSRFLVERFGRYVKGLDAENLRLSAWKGEILLKGLQLVPEALSEGLDIPVEVKWGHVGLFQLSVPWNKLGSKPVCATLEDVYILVTPLDTWSMDDMERQRRARYQKSRG 151          
BLAST of mRNA_H-paniculata_contig1604.3505.1 vs. uniprot
Match: A0A6H5K6C3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K6C3_9PHAE)

HSP 1 Score: 134 bits (338), Expect = 3.340e-34
Identity = 69/116 (59.48%), Postives = 78/116 (67.24%), Query Frame = 0
Query:    1 MVLEGYLSRFLVDRFGRYVKGLDAENLRLSAWKGEV-----------------------------------LLNGLQLIPEALTEEVDLPVDVKWGHIGLFHLSIPWSKLGSKPVR 81
            MVLEGYLSRFLV+RFGRYVKGLDAENLRLSAWKGEV                                   LL GLQL+PEAL+E +D+PV+VKWGH+GLF LS+PW+KLGSKPVR
Sbjct:    1 MVLEGYLSRFLVERFGRYVKGLDAENLRLSAWKGEVGKPRGVEEGVGRERVGGRHPGFTPIFRLDHNRLQILLTGLQLVPEALSEGLDIPVEVKWGHVGLFQLSVPWNKLGSKPVR 116          
BLAST of mRNA_H-paniculata_contig1604.3505.1 vs. uniprot
Match: A0A836C849_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C849_9STRA)

HSP 1 Score: 128 bits (322), Expect = 5.130e-32
Identity = 61/120 (50.83%), Postives = 84/120 (70.00%), Query Frame = 0
Query:    1 MVLEGYLSRFLVDRFGRYVKGLDAENLRLSAWKGEVLLNGLQLIPEALTEEVDLPVDVKWGHIGLFHLSIPWSKLGSKPVRVTLEDVYFLVSPLD------------TWGMDDMERQRRA 108
            MVLEGY+SR + DRFGRYVK +D ENLR++AW+G++ L+ L+L PEAL E     +++KWG++G FHLS+PW+ LG+KPV +TLE VY LV P+             T  +D +ER+R A
Sbjct:    1 MVLEGYVSRVIADRFGRYVKQVDKENLRIAAWRGDIELHNLELNPEALNEGYSSALEIKWGYVGHFHLSVPWNALGTKPVTMTLEGVYLLVLPVXXXXXXXXXXXXXTRAVDALERRRHA 120          
BLAST of mRNA_H-paniculata_contig1604.3505.1 vs. uniprot
Match: A0A8J6CHM4_DIALT (Peroxin/Ferlin domain-containing protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J6CHM4_DIALT)

HSP 1 Score: 100 bits (248), Expect = 4.860e-22
Identity = 49/104 (47.12%), Postives = 76/104 (73.08%), Query Frame = 0
Query:    2 VLEGYLSRFLVDR-FGRYVKGLDAENLRLSAWKGEVLLNGLQLIPEALTEEVDLPVDVKWGHIGLFHLSIPWSKLGSKPVRVTLEDVYFLVSPLDTWGMDDMER 104
            +L+G L+  L+DR  GRYVKG+DA++L+++ W G+++L  L+L  EAL E + LPV+++ G IG   L +PWSKLGS+P+RV ++DVY + +P+D    D+ ER
Sbjct:    1 MLQG-LALALLDRALGRYVKGIDADSLKIALWSGQIVLESLELKREALFE-LGLPVNIEAGFIGRVELQVPWSKLGSEPIRVLIQDVYLIATPIDRDAWDETER 102          
BLAST of mRNA_H-paniculata_contig1604.3505.1 vs. uniprot
Match: A0A3D8R395_9HELO (Vacuolar protein sorting-associated protein n=2 Tax=Coleophoma TaxID=453209 RepID=A0A3D8R395_9HELO)

HSP 1 Score: 95.5 bits (236), Expect = 2.010e-20
Identity = 48/111 (43.24%), Postives = 70/111 (63.06%), Query Frame = 0
Query:    2 VLEGYLSRFLVDRFGRYVKGLDAENLRLSAWKGEVLLNGLQLIPEALTEEVDLPVDVKWGHIGLFHLSIPWSKLGSKPVRVTLEDVYFLVSPLDTWGMDDMERQRRARYQK 112
            +LEG ++  L    G Y+K  D + L +  W G+V L  L+L  EAL +++ LP++V+ GH+G   LSIPWS+LGS PV+V +EDVY L +P +    D+ E QRR +  K
Sbjct:    1 MLEGLVASLLNRFLGMYIKNFDPKQLNVGIWSGDVKLRNLELRREAL-DQLKLPMNVEEGHLGQLTLSIPWSRLGSAPVKVFIEDVYLLAAPKEDAEWDEEEEQRRKQVVK 110          
BLAST of mRNA_H-paniculata_contig1604.3505.1 vs. uniprot
Match: E1Z7T7_CHLVA (Chorein N-terminal domain-containing protein (Fragment) n=1 Tax=Chlorella variabilis TaxID=554065 RepID=E1Z7T7_CHLVA)

HSP 1 Score: 87.0 bits (214), Expect = 5.350e-20
Identity = 42/92 (45.65%), Postives = 62/92 (67.39%), Query Frame = 0
Query:    2 VLEGYLSRFLVDRFGRYVKGLDAENLRLSAWKGEVLLNGLQLIPEALTEEVDLPVDVKWGHIGLFHLSIPWSKLGSKPVRVTLEDVYFLVSP 93
            + EGY+  +L    G+YV G+D ++LR+S +KG+V+L  LQL P+AL   +DLPV V+ G +G   L +PWS LG+ PV V ++ +Y L SP
Sbjct:    1 MFEGYVVYYLNQYLGKYVDGIDQKSLRISIYKGDVVLRNLQLKPDALAG-LDLPVTVRAGLLGSLTLKVPWSSLGTVPVEVKIDRLYLLASP 91          
BLAST of mRNA_H-paniculata_contig1604.3505.1 vs. uniprot
Match: A0A0J8QVG8_COCIT (VPS13 protein n=1 Tax=Coccidioides immitis RMSCC 3703 TaxID=454286 RepID=A0A0J8QVG8_COCIT)

HSP 1 Score: 87.8 bits (216), Expect = 8.060e-20
Identity = 45/106 (42.45%), Postives = 64/106 (60.38%), Query Frame = 0
Query:    2 VLEGYLSRFLVDRFGRYVKGLDAENLRLSAWKGEVLLNGLQLIPEALTEEVDLPVDVKWGHIGLFHLSIPWSKLGSKPVRVTLEDVYFLVSPLDTWGMDDMERQRR 107
            +LEG ++  L    G YVK  DA  L +  W G+V L  L+L  EAL +++ LP++V  GH+G   LSIPWS L  KPV++ +EDV+ L +P +    D  E +RR
Sbjct:    8 MLEGLVANLLNRFLGMYVKNFDAGQLNVGIWSGDVKLRNLELRREAL-DQLHLPLNVVEGHLGELTLSIPWSNLRGKPVKIEIEDVFLLAAPKEDSSYDPEEEKRR 112          
BLAST of mRNA_H-paniculata_contig1604.3505.1 vs. uniprot
Match: A0A0U1LQW5_TALIS (Vacuolar protein sorting-associated protein n=1 Tax=Talaromyces islandicus TaxID=28573 RepID=A0A0U1LQW5_TALIS)

HSP 1 Score: 93.6 bits (231), Expect = 9.480e-20
Identity = 49/111 (44.14%), Postives = 68/111 (61.26%), Query Frame = 0
Query:    2 VLEGYLSRFLVDRFGRYVKGLDAENLRLSAWKGEVLLNGLQLIPEALTEEVDLPVDVKWGHIGLFHLSIPWSKLGSKPVRVTLEDVYFLVSPLDTWGMDDMERQRRARYQK 112
            +LEG ++  L    G YVK  DA+ L +  W G+V L+ L+L  EAL +++ LP++V  GH+G   LSIPWS L  KPVRV +EDV+ L +P +    D  E +RRA   K
Sbjct:    1 MLEGVVANLLNRFLGMYVKNFDAKQLNIGIWSGDVKLHNLELRREAL-DQLHLPLNVVEGHLGQLTLSIPWSNLRGKPVRVDIEDVFLLAAPREDSDYDAEEEERRAHVIK 110          
BLAST of mRNA_H-paniculata_contig1604.3505.1 vs. uniprot
Match: A0A1F5LFI4_9EURO (Vacuolar protein sorting-associated protein n=1 Tax=Penicillium arizonense TaxID=1835702 RepID=A0A1F5LFI4_9EURO)

HSP 1 Score: 93.2 bits (230), Expect = 1.290e-19
Identity = 49/111 (44.14%), Postives = 67/111 (60.36%), Query Frame = 0
Query:    2 VLEGYLSRFLVDRFGRYVKGLDAENLRLSAWKGEVLLNGLQLIPEALTEEVDLPVDVKWGHIGLFHLSIPWSKLGSKPVRVTLEDVYFLVSPLDTWGMDDMERQRRARYQK 112
            +LEG ++  L    G YVK  DA+ L +  W G+V L  L+L  EAL +++ LP++V  GH+G   LSIPWS L  KPV+V +EDVY L +P +    D  E +RRA   K
Sbjct:    1 MLEGVVANLLNRFLGIYVKNFDAKQLNIGIWSGDVKLRNLELRREAL-DQLHLPLNVVEGHLGELTLSIPWSNLQGKPVKVDIEDVYLLAAPREDADYDPEEEERRANVLK 110          
BLAST of mRNA_H-paniculata_contig1604.3505.1 vs. uniprot
Match: A0A100IAW3_ASPNG (Vacuolar protein sorting-associated protein n=5 Tax=Aspergillus TaxID=5052 RepID=A0A100IAW3_ASPNG)

HSP 1 Score: 93.2 bits (230), Expect = 1.290e-19
Identity = 46/111 (41.44%), Postives = 67/111 (60.36%), Query Frame = 0
Query:    2 VLEGYLSRFLVDRFGRYVKGLDAENLRLSAWKGEVLLNGLQLIPEALTEEVDLPVDVKWGHIGLFHLSIPWSKLGSKPVRVTLEDVYFLVSPLDTWGMDDMERQRRARYQK 112
            +LEG ++  L    G Y+K  D   L +  W G+V L+ L+L  EAL +++ LP++V  GH+G   LSIPWS L  KPV+V +EDV+ L +P +    D  E +RRA + K
Sbjct:    1 MLEGLVANLLNRTLGMYIKNFDGRQLNIGIWSGDVKLHNLELRREAL-DQLRLPLNVVEGHVGELTLSIPWSNLRGKPVKVDIEDVFLLAAPKEDQDYDPKEEERRAHHLK 110          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig1604.3505.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FMF5_ECTSI3.520e-6083.48FYVE-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5K6C3_9PHAE3.340e-3459.48Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A836C849_9STRA5.130e-3250.83Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A8J6CHM4_DIALT4.860e-2247.12Peroxin/Ferlin domain-containing protein n=1 Tax=D... [more]
A0A3D8R395_9HELO2.010e-2043.24Vacuolar protein sorting-associated protein n=2 Ta... [more]
E1Z7T7_CHLVA5.350e-2045.65Chorein N-terminal domain-containing protein (Frag... [more]
A0A0J8QVG8_COCIT8.060e-2042.45VPS13 protein n=1 Tax=Coccidioides immitis RMSCC 3... [more]
A0A0U1LQW5_TALIS9.480e-2044.14Vacuolar protein sorting-associated protein n=1 Ta... [more]
A0A1F5LFI4_9EURO1.290e-1944.14Vacuolar protein sorting-associated protein n=1 Ta... [more]
A0A100IAW3_ASPNG1.290e-1941.44Vacuolar protein sorting-associated protein n=5 Ta... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR026854Vacuolar protein sorting-associated protein 13, N-terminal domainPFAMPF12624Chorein_Ncoord: 3..112
e-value: 1.8E-28
score: 99.0
NoneNo IPR availablePANTHERPTHR16166:SF93VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN 13Dcoord: 7..97
IPR026847Vacuolar protein sorting-associated protein 13PANTHERPTHR16166VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN VPS13coord: 7..97

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig1604contigH-paniculata_contig1604:19350..21864 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig1604.3505.1mRNA_H-paniculata_contig1604.3505.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig1604 19326..21864 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig1604.3505.1 ID=prot_H-paniculata_contig1604.3505.1|Name=mRNA_H-paniculata_contig1604.3505.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=122bp
MVLEGYLSRFLVDRFGRYVKGLDAENLRLSAWKGEVLLNGLQLIPEALTE
EVDLPVDVKWGHIGLFHLSIPWSKLGSKPVRVTLEDVYFLVSPLDTWGMD
DMERQRRARYQKSTGTWVDSV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR026854VPS13_N
IPR026847VPS13