mRNA_H-paniculata_contig1604.3505.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig1604.3505.1 vs. uniprot
Match: D7FMF5_ECTSI (FYVE-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMF5_ECTSI) HSP 1 Score: 208 bits (529), Expect = 9.110e-60 Identity = 96/115 (83.48%), Postives = 107/115 (93.04%), Query Frame = 1
Query: 25 MVLEGYLSRFLVDRFGRYVKGLDAENLRLSAWKGEVLLNGLQLIPEALTEEVDLPVDVKWGHIGLFHLSIPWSKLGSKPVRVTLEDVYFLVSPLDTWGMDDMERQRRARYQKSTG 369
MVLEGYLSRFLV+RFGRYVKGLDAENLRLSAWKGE+LL GLQL+PEAL+E +D+PV+VKWGH+GLF LS+PW+KLGSKPV TLEDVY LV+PLDTW MDDMERQRRARYQKS G
Sbjct: 37 MVLEGYLSRFLVERFGRYVKGLDAENLRLSAWKGEILLKGLQLVPEALSEGLDIPVEVKWGHVGLFQLSVPWNKLGSKPVCATLEDVYILVTPLDTWSMDDMERQRRARYQKSRG 151
BLAST of mRNA_H-paniculata_contig1604.3505.1 vs. uniprot
Match: A0A6H5K6C3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K6C3_9PHAE) HSP 1 Score: 134 bits (336), Expect = 8.460e-34 Identity = 69/116 (59.48%), Postives = 78/116 (67.24%), Query Frame = 1
Query: 25 MVLEGYLSRFLVDRFGRYVKGLDAENLRLSAWKGEV-----------------------------------LLNGLQLIPEALTEEVDLPVDVKWGHIGLFHLSIPWSKLGSKPVR 267
MVLEGYLSRFLV+RFGRYVKGLDAENLRLSAWKGEV LL GLQL+PEAL+E +D+PV+VKWGH+GLF LS+PW+KLGSKPVR
Sbjct: 1 MVLEGYLSRFLVERFGRYVKGLDAENLRLSAWKGEVGKPRGVEEGVGRERVGGRHPGFTPIFRLDHNRLQILLTGLQLVPEALSEGLDIPVEVKWGHVGLFQLSVPWNKLGSKPVR 116
BLAST of mRNA_H-paniculata_contig1604.3505.1 vs. uniprot
Match: A0A836C849_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C849_9STRA) HSP 1 Score: 127 bits (320), Expect = 1.310e-31 Identity = 61/120 (50.83%), Postives = 84/120 (70.00%), Query Frame = 1
Query: 25 MVLEGYLSRFLVDRFGRYVKGLDAENLRLSAWKGEVLLNGLQLIPEALTEEVDLPVDVKWGHIGLFHLSIPWSKLGSKPVRVTLEDVYFLVSPLD------------TWGMDDMERQRRA 348
MVLEGY+SR + DRFGRYVK +D ENLR++AW+G++ L+ L+L PEAL E +++KWG++G FHLS+PW+ LG+KPV +TLE VY LV P+ T +D +ER+R A
Sbjct: 1 MVLEGYVSRVIADRFGRYVKQVDKENLRIAAWRGDIELHNLELNPEALNEGYSSALEIKWGYVGHFHLSVPWNALGTKPVTMTLEGVYLLVLPVXXXXXXXXXXXXXTRAVDALERRRHA 120
BLAST of mRNA_H-paniculata_contig1604.3505.1 vs. uniprot
Match: A0A8J6CHM4_DIALT (Peroxin/Ferlin domain-containing protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J6CHM4_DIALT) HSP 1 Score: 99.4 bits (246), Expect = 1.230e-21 Identity = 49/104 (47.12%), Postives = 76/104 (73.08%), Query Frame = 1
Query: 28 VLEGYLSRFLVDR-FGRYVKGLDAENLRLSAWKGEVLLNGLQLIPEALTEEVDLPVDVKWGHIGLFHLSIPWSKLGSKPVRVTLEDVYFLVSPLDTWGMDDMER 336
+L+G L+ L+DR GRYVKG+DA++L+++ W G+++L L+L EAL E + LPV+++ G IG L +PWSKLGS+P+RV ++DVY + +P+D D+ ER
Sbjct: 1 MLQG-LALALLDRALGRYVKGIDADSLKIALWSGQIVLESLELKREALFE-LGLPVNIEAGFIGRVELQVPWSKLGSEPIRVLIQDVYLIATPIDRDAWDETER 102
BLAST of mRNA_H-paniculata_contig1604.3505.1 vs. uniprot
Match: A0A3D8R395_9HELO (Vacuolar protein sorting-associated protein n=2 Tax=Coleophoma TaxID=453209 RepID=A0A3D8R395_9HELO) HSP 1 Score: 94.7 bits (234), Expect = 5.040e-20 Identity = 48/111 (43.24%), Postives = 70/111 (63.06%), Query Frame = 1
Query: 28 VLEGYLSRFLVDRFGRYVKGLDAENLRLSAWKGEVLLNGLQLIPEALTEEVDLPVDVKWGHIGLFHLSIPWSKLGSKPVRVTLEDVYFLVSPLDTWGMDDMERQRRARYQK 360
+LEG ++ L G Y+K D + L + W G+V L L+L EAL +++ LP++V+ GH+G LSIPWS+LGS PV+V +EDVY L +P + D+ E QRR + K
Sbjct: 1 MLEGLVASLLNRFLGMYIKNFDPKQLNVGIWSGDVKLRNLELRREAL-DQLKLPMNVEEGHLGQLTLSIPWSRLGSAPVKVFIEDVYLLAAPKEDAEWDEEEEQRRKQVVK 110
BLAST of mRNA_H-paniculata_contig1604.3505.1 vs. uniprot
Match: E1Z7T7_CHLVA (Chorein N-terminal domain-containing protein (Fragment) n=1 Tax=Chlorella variabilis TaxID=554065 RepID=E1Z7T7_CHLVA) HSP 1 Score: 86.3 bits (212), Expect = 1.410e-19 Identity = 42/90 (46.67%), Postives = 61/90 (67.78%), Query Frame = 1
Query: 34 EGYLSRFLVDRFGRYVKGLDAENLRLSAWKGEVLLNGLQLIPEALTEEVDLPVDVKWGHIGLFHLSIPWSKLGSKPVRVTLEDVYFLVSP 303
EGY+ +L G+YV G+D ++LR+S +KG+V+L LQL P+AL +DLPV V+ G +G L +PWS LG+ PV V ++ +Y L SP
Sbjct: 3 EGYVVYYLNQYLGKYVDGIDQKSLRISIYKGDVVLRNLQLKPDALAG-LDLPVTVRAGLLGSLTLKVPWSSLGTVPVEVKIDRLYLLASP 91
BLAST of mRNA_H-paniculata_contig1604.3505.1 vs. uniprot
Match: A0A0J8QVG8_COCIT (VPS13 protein n=1 Tax=Coccidioides immitis RMSCC 3703 TaxID=454286 RepID=A0A0J8QVG8_COCIT) HSP 1 Score: 87.0 bits (214), Expect = 2.130e-19 Identity = 45/106 (42.45%), Postives = 64/106 (60.38%), Query Frame = 1
Query: 28 VLEGYLSRFLVDRFGRYVKGLDAENLRLSAWKGEVLLNGLQLIPEALTEEVDLPVDVKWGHIGLFHLSIPWSKLGSKPVRVTLEDVYFLVSPLDTWGMDDMERQRR 345
+LEG ++ L G YVK DA L + W G+V L L+L EAL +++ LP++V GH+G LSIPWS L KPV++ +EDV+ L +P + D E +RR
Sbjct: 8 MLEGLVANLLNRFLGMYVKNFDAGQLNVGIWSGDVKLRNLELRREAL-DQLHLPLNVVEGHLGELTLSIPWSNLRGKPVKIEIEDVFLLAAPKEDSSYDPEEEKRR 112
BLAST of mRNA_H-paniculata_contig1604.3505.1 vs. uniprot
Match: A0A0U1LQW5_TALIS (Vacuolar protein sorting-associated protein n=1 Tax=Talaromyces islandicus TaxID=28573 RepID=A0A0U1LQW5_TALIS) HSP 1 Score: 92.8 bits (229), Expect = 2.380e-19 Identity = 49/111 (44.14%), Postives = 68/111 (61.26%), Query Frame = 1
Query: 28 VLEGYLSRFLVDRFGRYVKGLDAENLRLSAWKGEVLLNGLQLIPEALTEEVDLPVDVKWGHIGLFHLSIPWSKLGSKPVRVTLEDVYFLVSPLDTWGMDDMERQRRARYQK 360
+LEG ++ L G YVK DA+ L + W G+V L+ L+L EAL +++ LP++V GH+G LSIPWS L KPVRV +EDV+ L +P + D E +RRA K
Sbjct: 1 MLEGVVANLLNRFLGMYVKNFDAKQLNIGIWSGDVKLHNLELRREAL-DQLHLPLNVVEGHLGQLTLSIPWSNLRGKPVRVDIEDVFLLAAPREDSDYDAEEEERRAHVIK 110
BLAST of mRNA_H-paniculata_contig1604.3505.1 vs. uniprot
Match: A0A1F5LFI4_9EURO (Vacuolar protein sorting-associated protein n=1 Tax=Penicillium arizonense TaxID=1835702 RepID=A0A1F5LFI4_9EURO) HSP 1 Score: 92.4 bits (228), Expect = 3.240e-19 Identity = 49/111 (44.14%), Postives = 67/111 (60.36%), Query Frame = 1
Query: 28 VLEGYLSRFLVDRFGRYVKGLDAENLRLSAWKGEVLLNGLQLIPEALTEEVDLPVDVKWGHIGLFHLSIPWSKLGSKPVRVTLEDVYFLVSPLDTWGMDDMERQRRARYQK 360
+LEG ++ L G YVK DA+ L + W G+V L L+L EAL +++ LP++V GH+G LSIPWS L KPV+V +EDVY L +P + D E +RRA K
Sbjct: 1 MLEGVVANLLNRFLGIYVKNFDAKQLNIGIWSGDVKLRNLELRREAL-DQLHLPLNVVEGHLGELTLSIPWSNLQGKPVKVDIEDVYLLAAPREDADYDPEEEERRANVLK 110
BLAST of mRNA_H-paniculata_contig1604.3505.1 vs. uniprot
Match: A0A100IAW3_ASPNG (Vacuolar protein sorting-associated protein n=5 Tax=Aspergillus TaxID=5052 RepID=A0A100IAW3_ASPNG) HSP 1 Score: 92.4 bits (228), Expect = 3.240e-19 Identity = 46/111 (41.44%), Postives = 67/111 (60.36%), Query Frame = 1
Query: 28 VLEGYLSRFLVDRFGRYVKGLDAENLRLSAWKGEVLLNGLQLIPEALTEEVDLPVDVKWGHIGLFHLSIPWSKLGSKPVRVTLEDVYFLVSPLDTWGMDDMERQRRARYQK 360
+LEG ++ L G Y+K D L + W G+V L+ L+L EAL +++ LP++V GH+G LSIPWS L KPV+V +EDV+ L +P + D E +RRA + K
Sbjct: 1 MLEGLVANLLNRTLGMYIKNFDGRQLNIGIWSGDVKLHNLELRREAL-DQLRLPLNVVEGHVGELTLSIPWSNLRGKPVKVDIEDVFLLAAPKEDQDYDPKEEERRAHHLK 110 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig1604.3505.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig1604.3505.1 >prot_H-paniculata_contig1604.3505.1 ID=prot_H-paniculata_contig1604.3505.1|Name=mRNA_H-paniculata_contig1604.3505.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=122bp MVLEGYLSRFLVDRFGRYVKGLDAENLRLSAWKGEVLLNGLQLIPEALTEback to top mRNA from alignment at H-paniculata_contig1604:19326..21864+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig1604.3505.1 ID=mRNA_H-paniculata_contig1604.3505.1|Name=mRNA_H-paniculata_contig1604.3505.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=2539bp|location=Sequence derived from alignment at H-paniculata_contig1604:19326..21864+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig1604:19326..21864+ >mRNA_H-paniculata_contig1604.3505.1 ID=mRNA_H-paniculata_contig1604.3505.1|Name=mRNA_H-paniculata_contig1604.3505.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=732bp|location=Sequence derived from alignment at H-paniculata_contig1604:19326..21864+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |