prot_H-paniculata_contig16017.3497.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig16017.3497.1
Unique Nameprot_H-paniculata_contig16017.3497.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length166
Homology
BLAST of mRNA_H-paniculata_contig16017.3497.1 vs. uniprot
Match: D7FNE7_ECTSI (DEAD box helicase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNE7_ECTSI)

HSP 1 Score: 290 bits (743), Expect = 6.440e-91
Identity = 149/164 (90.85%), Postives = 158/164 (96.34%), Query Frame = 0
Query:    1 VRARTGSGKTAAFALPLLQKILRRKEAEPGLMQGVRAVVLVPTRELCEQARAHLSELMHYCRNCVSLLALVDDNMPAQQAALRDRADILVATPARLVAHLKAGNVELKDTVETLVVDEADLVLSFGYSDDIRSITACLPKICQGFLMSATLSPELEDLKRVVLH 164
            VRARTGSGKTAAFALPLLQKILRRKEAEPGL +GVRAVVLVPTRELC+QARAHLSELMHYCR+ VSLLALVDDNM AQ+AALRD+AD+LVATPARLVAHLKAGNVELKDTVETLVVDEADLVLSFGYS+DIR++T  LPKICQGFLMSATLS ELEDLKRVVLH
Sbjct:   89 VRARTGSGKTAAFALPLLQKILRRKEAEPGLPRGVRAVVLVPTRELCDQARAHLSELMHYCRDQVSLLALVDDNMAAQEAALRDKADVLVATPARLVAHLKAGNVELKDTVETLVVDEADLVLSFGYSEDIRAVTKRLPKICQGFLMSATLSAELEDLKRVVLH 252          
BLAST of mRNA_H-paniculata_contig16017.3497.1 vs. uniprot
Match: A0A6H5KX88_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KX88_9PHAE)

HSP 1 Score: 283 bits (725), Expect = 5.490e-90
Identity = 150/175 (85.71%), Postives = 158/175 (90.29%), Query Frame = 0
Query:    1 VRARTGSGKTAAFALPLLQKILRRKEAEPGLMQGVRAVVLVPTRELCEQA-----------RAHLSELMHYCRNCVSLLALVDDNMPAQQAALRDRADILVATPARLVAHLKAGNVELKDTVETLVVDEADLVLSFGYSDDIRSITACLPKICQGFLMSATLSPELEDLKRVVLH 164
            VRARTGSGKTAAFALPLLQKILRRKEAEPGL +GVRAVVLVPTRELCEQA           RAHLSELMHYCR+ VSLLALVDDNM AQ+AALRD+AD+LVATPARLVAHLKAGNVELKDTVETLVVDEADLVLSFGYS+DIR++T  LPKICQGFLMSATLS ELEDLKRVVLH
Sbjct:   87 VRARTGSGKTAAFALPLLQKILRRKEAEPGLTRGVRAVVLVPTRELCEQASSSVCGVTHRARAHLSELMHYCRDQVSLLALVDDNMAAQEAALRDKADVLVATPARLVAHLKAGNVELKDTVETLVVDEADLVLSFGYSEDIRAVTKRLPKICQGFLMSATLSAELEDLKRVVLH 261          
BLAST of mRNA_H-paniculata_contig16017.3497.1 vs. uniprot
Match: A0A835ZDE1_9STRA (DEAD box helicase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZDE1_9STRA)

HSP 1 Score: 256 bits (654), Expect = 6.560e-79
Identity = 131/164 (79.88%), Postives = 142/164 (86.59%), Query Frame = 0
Query:    1 VRARTGSGKTAAFALPLLQKILRRKEAEPGLMQGVRAVVLVPTRELCEQARAHLSELMHYCRNCVSLLALVDDNMPAQQAALRDRADILVATPARLVAHLKAGNVELKDTVETLVVDEADLVLSFGYSDDIRSITACLPKICQGFLMSATLSPELEDLKRVVLH 164
            VRARTGSGKTAAF LPLLQK+L R+EAEP L   VRAVVLVPTRELCEQ R  L ELM YCR+ V LLALVDDNM AQQA LRD+ DI+VATPARLVAHLKAGN+ LKD VETLVVDEADLVLS+GY DDIR +TA LPK+CQGFLMSATLS ELE+LKRV+LH
Sbjct:   55 VRARTGSGKTAAFGLPLLQKLLARREAEPDLAAAVRAVVLVPTRELCEQVRGQLWELMAYCRDIVGLLALVDDNMSAQQAQLRDKPDIVVATPARLVAHLKAGNITLKDAVETLVVDEADLVLSYGYRDDIRHVTAHLPKVCQGFLMSATLSEELEELKRVILH 218          
BLAST of mRNA_H-paniculata_contig16017.3497.1 vs. uniprot
Match: A0A3M6VU95_9STRA (Uncharacterized protein n=2 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VU95_9STRA)

HSP 1 Score: 221 bits (562), Expect = 2.240e-65
Identity = 114/164 (69.51%), Postives = 132/164 (80.49%), Query Frame = 0
Query:    1 VRARTGSGKTAAFALPLLQKILRRKEAEPGLMQGVRAVVLVPTRELCEQARAHLSELMHYCRNCVSLLALVDDNMPAQQAALRDRADILVATPARLVAHLKAGNVELKDTVETLVVDEADLVLSFGYSDDIRSITACLPKICQGFLMSATLSPELEDLKRVVLH 164
            VRARTGSGKTAAFALPLL KIL+ K+  P     VRA+VLVPT+EL EQ R H+ ELM+YC++ VSLLAL   +M AQQA LRD  D+LVATP RLVAHL+AGN+ LKD+V+T+V+DEADLVLSFGY +DIR+I   LPK CQ F MSATLSPELE LKR VLH
Sbjct:   59 VRARTGSGKTAAFALPLLHKILQHKQDAPASDSAVRALVLVPTKELVEQTRRHMIELMYYCQDTVSLLALGSQSMNAQQALLRDAPDVLVATPGRLVAHLEAGNLTLKDSVQTVVIDEADLVLSFGYGEDIRTIFNALPKACQTFCMSATLSPELEKLKRSVLH 222          
BLAST of mRNA_H-paniculata_contig16017.3497.1 vs. uniprot
Match: H3GBC9_PHYRM (Uncharacterized protein n=16 Tax=Phytophthora TaxID=4783 RepID=H3GBC9_PHYRM)

HSP 1 Score: 220 bits (560), Expect = 3.970e-65
Identity = 113/164 (68.90%), Postives = 133/164 (81.10%), Query Frame = 0
Query:    1 VRARTGSGKTAAFALPLLQKILRRKEAEPGLMQGVRAVVLVPTRELCEQARAHLSELMHYCRNCVSLLALVDDNMPAQQAALRDRADILVATPARLVAHLKAGNVELKDTVETLVVDEADLVLSFGYSDDIRSITACLPKICQGFLMSATLSPELEDLKRVVLH 164
            VRARTGSGKTAAFALPLL KIL+ K+  P     VRA+VLVPT+EL EQ R H++ELM+YC++ VSLLAL   +M AQQA LRD  D+LVATP RLVAHL+AGN+ LK++V+T+V+DEADLVLSFGY +DIR+I   LPK CQ F MSATLSPELE LKR VLH
Sbjct:   59 VRARTGSGKTAAFALPLLHKILQHKQDAPASDPAVRALVLVPTKELVEQTRRHMTELMYYCQDTVSLLALGGQSMSAQQALLRDAPDVLVATPGRLVAHLEAGNLTLKESVQTVVIDEADLVLSFGYGEDIRTIFNALPKACQTFCMSATLSPELEKLKRSVLH 222          
BLAST of mRNA_H-paniculata_contig16017.3497.1 vs. uniprot
Match: M4BKX7_HYAAE (Uncharacterized protein n=4 Tax=Peronosporaceae TaxID=4777 RepID=M4BKX7_HYAAE)

HSP 1 Score: 219 bits (557), Expect = 1.420e-64
Identity = 114/164 (69.51%), Postives = 130/164 (79.27%), Query Frame = 0
Query:    1 VRARTGSGKTAAFALPLLQKILRRKEAEPGLMQGVRAVVLVPTRELCEQARAHLSELMHYCRNCVSLLALVDDNMPAQQAALRDRADILVATPARLVAHLKAGNVELKDTVETLVVDEADLVLSFGYSDDIRSITACLPKICQGFLMSATLSPELEDLKRVVLH 164
            VRARTGSGKTAAFALPLL KIL+ K  +      VRA+VLVPT+EL EQ R HL ELM+YC++ VSLLAL   +M AQQA LRD  D+LVATP RLVAHL+AGN+ LKD+V+T+V+DEADLVLSFGY +DIR I   LPK CQ F MSATLSPELE LKR VLH
Sbjct:   59 VRARTGSGKTAAFALPLLHKILQTKVQDAAAAAAVRALVLVPTKELVEQTRRHLLELMYYCQDTVSLLALGGQSMNAQQALLRDAPDVLVATPGRLVAHLEAGNLTLKDSVQTVVIDEADLVLSFGYGEDIRKIVNALPKACQTFCMSATLSPELETLKRSVLH 222          
BLAST of mRNA_H-paniculata_contig16017.3497.1 vs. uniprot
Match: A0A662YEI0_9STRA (Uncharacterized protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662YEI0_9STRA)

HSP 1 Score: 216 bits (549), Expect = 2.030e-63
Identity = 113/164 (68.90%), Postives = 130/164 (79.27%), Query Frame = 0
Query:    1 VRARTGSGKTAAFALPLLQKILRRKEAEPGLMQGVRAVVLVPTRELCEQARAHLSELMHYCRNCVSLLALVDDNMPAQQAALRDRADILVATPARLVAHLKAGNVELKDTVETLVVDEADLVLSFGYSDDIRSITACLPKICQGFLMSATLSPELEDLKRVVLH 164
            VRARTGSGKTAAFALPLL KIL+ K+        VRA+VLVPT+EL EQ R HL ELM+YC + VSLLAL   +M AQQA LRD  D+LVATP RLVAHL+AGN+ LKD+V+T+V+DEADLVLSFGY +D+R+I   LPK CQ F MSATLSPELE LKR VLH
Sbjct:   61 VRARTGSGKTAAFALPLLHKILQLKQDAATSEPAVRALVLVPTKELVEQTRRHLLELMYYCSDVVSLLALGGQSMSAQQALLRDAPDVLVATPGRLVAHLEAGNLTLKDSVQTVVIDEADLVLSFGYGEDVRAIFNALPKACQTFCMSATLSPELEKLKRSVLH 224          
BLAST of mRNA_H-paniculata_contig16017.3497.1 vs. uniprot
Match: A0A421GZS4_9STRA (Uncharacterized protein n=4 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A421GZS4_9STRA)

HSP 1 Score: 214 bits (546), Expect = 2.900e-63
Identity = 109/164 (66.46%), Postives = 132/164 (80.49%), Query Frame = 0
Query:    1 VRARTGSGKTAAFALPLLQKILRRKEAEPGLMQGVRAVVLVPTRELCEQARAHLSELMHYCRNCVSLLALVDDNMPAQQAALRDRADILVATPARLVAHLKAGNVELKDTVETLVVDEADLVLSFGYSDDIRSITACLPKICQGFLMSATLSPELEDLKRVVLH 164
            VRARTGSGKTAAF+LPLL KIL++K+        +RA+VLVPT+EL EQ R H+ ELM+YC++ VSLLAL   +M AQQA LRD  D+LVATP RLVAHL+AGN+ LKD+V+T+V+DEADLVLSFGY +D+R+I   LPK CQ F MSATLSPELE LK+ VLH
Sbjct:   61 VRARTGSGKTAAFSLPLLHKILQQKQDAAASEPAIRALVLVPTKELVEQTRRHMLELMYYCQDTVSLLALGGQSMNAQQALLRDAPDVLVATPGRLVAHLEAGNLTLKDSVQTVVIDEADLVLSFGYGEDVRTIFNALPKACQTFCMSATLSPELEKLKKSVLH 224          
BLAST of mRNA_H-paniculata_contig16017.3497.1 vs. uniprot
Match: A0A5D6XSV1_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XSV1_9STRA)

HSP 1 Score: 214 bits (546), Expect = 2.900e-63
Identity = 111/167 (66.47%), Postives = 136/167 (81.44%), Query Frame = 0
Query:    1 VRARTGSGKTAAFALPLLQKILRRKEAEPG---LMQGVRAVVLVPTRELCEQARAHLSELMHYCRNCVSLLALVDDNMPAQQAALRDRADILVATPARLVAHLKAGNVELKDTVETLVVDEADLVLSFGYSDDIRSITACLPKICQGFLMSATLSPELEDLKRVVLH 164
            VRARTGSGKTAAFALPLL KIL++K+ +     ++  V+A+VLVPT+EL EQ R H++ELM+YC + VSLLAL   +M AQQA LRD  D++VATP RLVAHL+AGN++LKD+V+TLV+DEADLVLSFGY +DIR+I   LPK CQ F MSATLSPELE LK+ VLH
Sbjct:   59 VRARTGSGKTAAFALPLLHKILQQKQDQSSAGAMLPSVKALVLVPTKELVEQIRKHMAELMYYCSDVVSLLALGGQSMNAQQALLRDVPDVVVATPGRLVAHLEAGNIKLKDSVQTLVIDEADLVLSFGYGEDIRTIFNHLPKACQSFCMSATLSPELEKLKKSVLH 225          
BLAST of mRNA_H-paniculata_contig16017.3497.1 vs. uniprot
Match: K3WG30_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WG30_GLOUD)

HSP 1 Score: 213 bits (543), Expect = 1.620e-62
Identity = 111/167 (66.47%), Postives = 134/167 (80.24%), Query Frame = 0
Query:    1 VRARTGSGKTAAFALPLLQKILRRKEAEPG---LMQGVRAVVLVPTRELCEQARAHLSELMHYCRNCVSLLALVDDNMPAQQAALRDRADILVATPARLVAHLKAGNVELKDTVETLVVDEADLVLSFGYSDDIRSITACLPKICQGFLMSATLSPELEDLKRVVLH 164
            VRARTGSGKTAAF LPLL KIL++K+ +     L   V+A+VLVPT+EL EQ + H+SELM+YC + VSLLAL   +M AQQA LRD  DI++ATP RLVAHL+AGN++LKD+V+TLV+DEADLVLSFGY +DIR+I   LPK CQ F MSATLSPELE LK+ VLH
Sbjct:   65 VRARTGSGKTAAFGLPLLHKILQQKQDQSSAGALQPSVKALVLVPTKELVEQTKRHMSELMYYCNDVVSLLALGGQSMNAQQALLRDVPDIIIATPGRLVAHLEAGNLKLKDSVQTLVIDEADLVLSFGYGEDIRTIFNHLPKACQNFCMSATLSPELEKLKKSVLH 231          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig16017.3497.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FNE7_ECTSI6.440e-9190.85DEAD box helicase n=1 Tax=Ectocarpus siliculosus T... [more]
A0A6H5KX88_9PHAE5.490e-9085.71Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835ZDE1_9STRA6.560e-7979.88DEAD box helicase n=1 Tax=Tribonema minus TaxID=30... [more]
A0A3M6VU95_9STRA2.240e-6569.51Uncharacterized protein n=2 Tax=Peronospora effusa... [more]
H3GBC9_PHYRM3.970e-6568.90Uncharacterized protein n=16 Tax=Phytophthora TaxI... [more]
M4BKX7_HYAAE1.420e-6469.51Uncharacterized protein n=4 Tax=Peronosporaceae Ta... [more]
A0A662YEI0_9STRA2.030e-6368.90Uncharacterized protein n=2 Tax=Nothophytophthora ... [more]
A0A421GZS4_9STRA2.900e-6366.46Uncharacterized protein n=4 Tax=Phytophthora kerno... [more]
A0A5D6XSV1_9STRA2.900e-6366.47Uncharacterized protein n=1 Tax=Pythium brassicum ... [more]
K3WG30_GLOUD1.620e-6266.47Uncharacterized protein n=1 Tax=Globisporangium ul... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR014001Helicase superfamily 1/2, ATP-binding domainSMARTSM00487ultradead3coord: 1..165
e-value: 1.7E-14
score: 64.1
IPR014001Helicase superfamily 1/2, ATP-binding domainPROSITEPS51192HELICASE_ATP_BIND_1coord: 1..165
score: 22.751
NoneNo IPR availableGENE3D3.40.50.300coord: 1..165
e-value: 7.5E-46
score: 158.5
NoneNo IPR availablePANTHERPTHR24031:SF96ATP-DEPENDENT RNA HELICASE DDX56-RELATEDcoord: 1..160
NoneNo IPR availablePANTHERPTHR24031RNA HELICASEcoord: 1..160
IPR011545DEAD/DEAH box helicase domainPFAMPF00270DEADcoord: 1..157
e-value: 1.8E-33
score: 115.8
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 1..164

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig16017contigH-paniculata_contig16017:1499..5515 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig16017.3497.1mRNA_H-paniculata_contig16017.3497.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig16017 1499..5515 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig16017.3497.1 ID=prot_H-paniculata_contig16017.3497.1|Name=mRNA_H-paniculata_contig16017.3497.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=166bp
VRARTGSGKTAAFALPLLQKILRRKEAEPGLMQGVRAVVLVPTRELCEQA
RAHLSELMHYCRNCVSLLALVDDNMPAQQAALRDRADILVATPARLVAHL
KAGNVELKDTVETLVVDEADLVLSFGYSDDIRSITACLPKICQGFLMSAT
LSPELEDLKRVVLHR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR014001Helicase_ATP-bd
IPR011545DEAD/DEAH_box_helicase_dom
IPR027417P-loop_NTPase