prot_H-paniculata_contig16015.3496.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig16015.3496.1 vs. uniprot
Match: W7TII5_9STRA (Gag-pol polyprotein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TII5_9STRA) HSP 1 Score: 117 bits (294), Expect = 2.640e-29 Identity = 62/146 (42.47%), Postives = 93/146 (63.70%), Query Frame = 0
Query: 1 MSTLRTVFSLAAEHDFEFEGMDVDAAYMNAPVEEELFVKLPP---EVSPFSRDIPFVHRLRKCLYGLKQSGRNWNNTLDDFLVGIGLDRSTTNSCLYISRDDGGETNLLVTVYVDDLVIAGR-REKVDEFKHNITQRFRIKDLGSL 142
++T+R + ++A D E + MDVD AY+ + +EE+++VK PP + P ++ V RLRK LYGLKQSGRNW+ +D + G G S+ + CLY+ GE L++ +YVDDL+IAG R+ VD+FK I++ +KDL L
Sbjct: 64 ITTIRLILAIACILDLELDNMDVDTAYLQSDLEEKIYVKQPPGYEQCGPNGEEL--VCRLRKSLYGLKQSGRNWHKKIDGWFRGYGFHSSSADPCLYVKFGSSGEM-LVIVLYVDDLIIAGNSRDMVDDFKQAISKEISMKDLKEL 206
BLAST of mRNA_H-paniculata_contig16015.3496.1 vs. uniprot
Match: W7TCB8_9STRA (Gag-pol polyprotein n=3 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TCB8_9STRA) HSP 1 Score: 117 bits (293), Expect = 3.190e-28 Identity = 63/144 (43.75%), Postives = 90/144 (62.50%), Query Frame = 0
Query: 1 MSTLRTVFSLAAEHDFEFEGMDVDAAYMNAPVEEELFVKLPPEVSPF-SRDIPFVHRLRKCLYGLKQSGRNWNNTLDDFLVGIGLDRSTTNSCLYISRDDGGETNLLVTVYVDDLVIAGR-REKVDEFKHNITQRFRIKDLGSL 142
++T+R V +LA D E + MDV+ AY+ + +EE+++VK PP + S V RLRK LYGLKQSGRNW+ +D + G G S+ + CLY+ GE L++ +YVDDL+I RE V +FKH I++ F +KDL L
Sbjct: 64 ITTIRLVLALACILDLELDNMDVEPAYLQSDLEEKVYVKQPPGYEQYGSNGEELVCRLRKSLYGLKQSGRNWHKKIDGWFRGYGFHPSSADPCLYVKFGSSGEI-LVIVLYVDDLIITSNSREMVGKFKHAISREFSMKDLKEL 206
BLAST of mRNA_H-paniculata_contig16015.3496.1 vs. uniprot
Match: A0A7D9HG25_PARCT (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9HG25_PARCT) HSP 1 Score: 117 bits (293), Expect = 3.680e-28 Identity = 56/144 (38.89%), Postives = 94/144 (65.28%), Query Frame = 0
Query: 1 MSTLRTVFSLAAEHDFEFEGMDVDAAYMNAPVEEELFVKLPPEVSPFSRD-IPFVHRLRKCLYGLKQSGRNWNNTLDDFLVGIGLDRSTTNSCLYISRDDGGETNLLVTVYVDDLVIAGRR-EKVDEFKHNITQRFRIKDLGSL 142
++++ + LAA++D MDV A+++AP++ E+F++ P S + + V+RL+K LYGLKQSGRNWN LD++L+ G R+ + C+Y + GE ++V ++VDDL+IA +K+ +FK N+ +FR+KDLG +
Sbjct: 234 ITSITILMQLAAQYDLTVHQMDVKTAFLHAPIDHEIFMEQPMGFEELSENGVKLVYRLKKSLYGLKQSGRNWNRVLDEYLISDGFVRNPVDHCVY--QKQTGEDIIIVVIWVDDLIIASSNTDKIRQFKENMKSKFRMKDLGEI 375
BLAST of mRNA_H-paniculata_contig16015.3496.1 vs. uniprot
Match: A0A6S7HLY2_PARCT (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A6S7HLY2_PARCT) HSP 1 Score: 117 bits (292), Expect = 1.140e-27 Identity = 55/144 (38.19%), Postives = 94/144 (65.28%), Query Frame = 0
Query: 1 MSTLRTVFSLAAEHDFEFEGMDVDAAYMNAPVEEELFVKLPPEVSPFSRD-IPFVHRLRKCLYGLKQSGRNWNNTLDDFLVGIGLDRSTTNSCLYISRDDGGETNLLVTVYVDDLVIAGRR-EKVDEFKHNITQRFRIKDLGSL 142
++++R + LAA+++ MDV A+++ P++ E+F++ P S + + V+RL+K LYGLKQSGRNWN LD++L+ G R+ + C+Y + GE ++V ++VDDL+IA +K+ +FK N+ +FR+KDLG +
Sbjct: 259 ITSIRILMQLAAQYNLTVHQMDVKTAFLHVPIDHEIFMEQPMGFEELSENGVKLVYRLKKSLYGLKQSGRNWNRVLDEYLISDGFIRNPVDHCVY--QKQTGEDIIIVVIWVDDLIIASSNTDKISQFKENMKSKFRMKDLGEI 400
BLAST of mRNA_H-paniculata_contig16015.3496.1 vs. uniprot
Match: W7TJ26_9STRA (Gag-pol polyprotein n=2 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TJ26_9STRA) HSP 1 Score: 115 bits (288), Expect = 4.620e-27 Identity = 62/144 (43.06%), Postives = 89/144 (61.81%), Query Frame = 0
Query: 1 MSTLRTVFSLAAEHDFEFEGMDVDAAYMNAPVEEELFVKLPPEVSPFSRDI-PFVHRLRKCLYGLKQSGRNWNNTLDDFLVGIGLDRSTTNSCLYISRDDGGETNLLVTVYVDDLVIAGR-REKVDEFKHNITQRFRIKDLGSL 142
M+T+R V +LA D E + MDVD AY+ + +EE++++K PP + + V RLRK LYGLKQSGRNW+ +D + G GL S + CLY+ GE L++ +YVDDL+I R D+FK +I++ F +KDL L
Sbjct: 284 MTTIRLVLALACILDLELDNMDVDTAYLQSDLEEKVYIKQPPGYEKYGPNGGELVCRLRKSLYGLKQSGRNWHKKIDGWFRGYGLHPSYADPCLYVKFASSGEI-LVIVLYVDDLIIGSNSRTMTDKFKQDISREFSMKDLKEL 426
BLAST of mRNA_H-paniculata_contig16015.3496.1 vs. uniprot
Match: A0A409WVI7_9AGAR (Integrase catalytic domain-containing protein (Fragment) n=1 Tax=Panaeolus cyanescens TaxID=181874 RepID=A0A409WVI7_9AGAR) HSP 1 Score: 114 bits (285), Expect = 1.290e-26 Identity = 62/143 (43.36%), Postives = 90/143 (62.94%), Query Frame = 0
Query: 1 MSTLRTVFSLAAEHDFEFEGMDVDAAYMNAPVEEELFVKLPPEVSPFSRDIPFVH--RLRKCLYGLKQSGRNWNNTLDDFLVGIGLDRSTTNSCLYISRDDGGETNLLVTVYVDDLVIAGR-REKVDEFKHNITQRFRIKDLG 140
+ ++R + +LAA+HD E + MDV AY+N + E+L++ LPP+ DIP H +L+K LYGLKQ+GR WN T D L +G R +CLY+ R +GG+ LV VYVDDL++A R +DE K + F+++DLG
Sbjct: 1093 LESIRIILALAAKHDLELDQMDVQTAYLNGKLTEDLYL-LPPD----GVDIPKGHCWKLKKSLYGLKQAGRTWNKTFDSSLKDLGFTRLDAETCLYVMRGEGGKLCFLV-VYVDDLILAATSRAYMDEIKTKLAATFKMRDLG 1229
BLAST of mRNA_H-paniculata_contig16015.3496.1 vs. uniprot
Match: W7T0T3_9STRA (Gag-pol polyprotein n=2 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7T0T3_9STRA) HSP 1 Score: 113 bits (283), Expect = 2.300e-26 Identity = 60/144 (41.67%), Postives = 90/144 (62.50%), Query Frame = 0
Query: 1 MSTLRTVFSLAAEHDFEFEGMDVDAAYMNAPVEEELFVKLPPEVSPF-SRDIPFVHRLRKCLYGLKQSGRNWNNTLDDFLVGIGLDRSTTNSCLYISRDDGGETNLLVTVYVDDLVIAGR-REKVDEFKHNITQRFRIKDLGSL 142
++T+R + ++A D E + MDV+ AY+ + +EE+++VK P + S V RLRK LYGLKQSGRNW+ +D + G G S+ + CLY+ GE L++ +YVDDL+I RE V++FKH I++ F +KDL L
Sbjct: 504 ITTIRLILAIACILDLELDNMDVETAYLQSDLEEKVYVKQPIGYEQYGSNGEELVCRLRKSLYGLKQSGRNWHKKIDGWFRGYGFHPSSADPCLYVKFGSSGEI-LVIVLYVDDLIITSNSREMVNKFKHAISREFSMKDLKEL 646
BLAST of mRNA_H-paniculata_contig16015.3496.1 vs. uniprot
Match: W7T174_9STRA (Gag-pol polyprotein n=2 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7T174_9STRA) HSP 1 Score: 112 bits (281), Expect = 4.310e-26 Identity = 62/144 (43.06%), Postives = 88/144 (61.11%), Query Frame = 0
Query: 1 MSTLRTVFSLAAEHDFEFEGMDVDAAYMNAPVEEELFVKLPPEVSPFSRDI-PFVHRLRKCLYGLKQSGRNWNNTLDDFLVGIGLDRSTTNSCLYISRDDGGETNLLVTVYVDDLVIAGR-REKVDEFKHNITQRFRIKDLGSL 142
M+T+R V +LA D E + MDVD AY+ + +EE++++K P + + V RLRK LYGLKQSGRNW+ +D + G G S+ + CLY+ GE L+V +YVDDL+IA R D+FK I++ F +KDL L
Sbjct: 582 MTTIRLVLALACILDLELDNMDVDTAYLQSDLEEKVYIKQPHGYEKYGPNGGELVCRLRKSLYGLKQSGRNWHKKIDGWFRGYGFHPSSADPCLYVKFGSSGEM-LVVVLYVDDLIIASNSRTMADKFKQAISREFSMKDLKEL 724
BLAST of mRNA_H-paniculata_contig16015.3496.1 vs. uniprot
Match: A0A2R6NJS8_9APHY (Integrase catalytic domain-containing protein n=1 Tax=Hermanssonia centrifuga TaxID=98765 RepID=A0A2R6NJS8_9APHY) HSP 1 Score: 112 bits (280), Expect = 5.910e-26 Identity = 56/142 (39.44%), Postives = 88/142 (61.97%), Query Frame = 0
Query: 2 STLRTVFSLAAEHDFEFEGMDVDAAYMNAPVEEELFVKLPPEVSPFSRDIPFVHRLRKCLYGLKQSGRNWNNTLDDFLVGIGLDRSTTNSCLYISRDDGGETNLLVTVYVDDLVIAGRR-EKVDEFKHNITQRFRIKDLGSL 142
+TLR S A+ D+E MDV AY+ ++EE+++K+P + ++ + RL+K LYGLKQSGR W LD+ + +G ++ + CLY+ ++DG L+V VYVDD+ +AG++ V FKH++ +RF I D G L
Sbjct: 655 TTLRAFMSFVADQDWELHQMDVVGAYLQGDLDEEIYMKVPEGIKEPGKE-GWCWRLKKALYGLKQSGRQWKKKLDEAMAELGFEKGQADECLYVLKEDG-HIVLMVLVYVDDMAVAGKKLALVKRFKHDLAERFDITDGGDL 794
BLAST of mRNA_H-paniculata_contig16015.3496.1 vs. uniprot
Match: A0A7D9L0S1_PARCT (Retrovirus-related Pol poly from transposon TNT 1-94 n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9L0S1_PARCT) HSP 1 Score: 106 bits (265), Expect = 6.700e-26 Identity = 56/144 (38.89%), Postives = 92/144 (63.89%), Query Frame = 0
Query: 1 MSTLRTVFSLAAEHDFEFEGMDVDAAYMNAPVEEELFVKLPPEVSPFSRDIPF-VHRLRKCLYGLKQSGRNWNNTLDDFLVGIGLDRSTTNSCLYISRDDGGETNLLVTVYVDDLVIAGR-REKVDEFKHNITQRFRIKDLGSL 142
M+++R + LA +++ MDV AY+NAP++ EL+V+ P + +D + V++LRK LYGLKQSGRNWN+ L LV G +S ++SC+Y G++ +V ++VDD++IA + K N+++RF++KD+G L
Sbjct: 71 MTSIRILMQLAMQYNLTIHQMDVKTAYLNAPIDCELYVEQPEGFTMTGKDGEYLVYKLRKSLYGLKQSGRNWNSVLHSHLVSEGFIQSQSDSCVYTKIS--GKSMTIVIIWVDDIIIASNCTVTLTNVKGNLSKRFQMKDMGKL 212 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig16015.3496.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_H-paniculata_contig16015.3496.1 ID=prot_H-paniculata_contig16015.3496.1|Name=mRNA_H-paniculata_contig16015.3496.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=148bpback to top |