prot_H-paniculata_contig1601.3494.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig1601.3494.1
Unique Nameprot_H-paniculata_contig1601.3494.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length96
Homology
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BLAST of mRNA_H-paniculata_contig1601.3494.1 vs. uniprot
Match: D8LRM2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRM2_ECTSI)

HSP 1 Score: 88.2 bits (217), Expect = 2.590e-18
Identity = 52/84 (61.90%), Postives = 63/84 (75.00%), Query Frame = 0 
Query:    2 EAGQRVVERTYERNLAAVHEEAKKRLAAEGERRTREVAEERRKSKAVVGALQALQGELRSSDEKGSGLERQVLQLSARINKVES 85
            EA  R VER ++R L A+ EEAKK+L  E  RR REV++ R+KSKAVV ALQ LQGEL  S+ KGSGLERQV QLSAR+++  S
Sbjct:  620 EASHRAVERNHDRALVAIREEAKKKLLEEEARRVREVSDARKKSKAVVEALQTLQGELTQSEAKGSGLERQVSQLSARMSRAGS 703
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig1601.3494.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LRM2_ECTSI2.590e-1861.90Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig1601contigH-paniculata_contig1601:23412..24756 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig1601.3494.1mRNA_H-paniculata_contig1601.3494.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig1601 23412..24756 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig1601.3494.1 ID=prot_H-paniculata_contig1601.3494.1|Name=mRNA_H-paniculata_contig1601.3494.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=96bp
MEAGQRVVERTYERNLAAVHEEAKKRLAAEGERRTREVAEERRKSKAVVG
ALQALQGELRSSDEKGSGLERQVLQLSARINKVESVGNTGRSDSGS
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