prot_H-paniculata_contig1601.3493.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig1601.3493.1
Unique Nameprot_H-paniculata_contig1601.3493.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length162
Homology
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BLAST of mRNA_H-paniculata_contig1601.3493.1 vs. uniprot
Match: D8LRM2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRM2_ECTSI)

HSP 1 Score: 92.0 bits (227), Expect = 1.240e-18
Identity = 55/82 (67.07%), Postives = 70/82 (85.37%), Query Frame = 0 
Query:    1 AKEAAEKGASEARSRAEEEARRTSSLEDSLCRKEREMLVALERLDKLKLRLQDVERSAREGEDDLRSMVRQRESEVERLTRR 82
            AKE A++ A EAR RA+EE ++ SSLE+SLCRKE +ML ALERL++LK+R ++VE  AREGE+DLRS+VRQRESE+E LTRR
Sbjct:  760 AKETAQRSALEARLRADEETKKRSSLEESLCRKESDMLAALERLNQLKIRQKEVEEHAREGEEDLRSLVRQRESEIESLTRR 841
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig1601.3493.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LRM2_ECTSI1.240e-1867.07Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 37..82
NoneNo IPR availableCOILSCoilCoilcoord: 2..22

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig1601contigH-paniculata_contig1601:21324..22934 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig1601.3493.1mRNA_H-paniculata_contig1601.3493.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig1601 21322..22934 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig1601.3493.1 ID=prot_H-paniculata_contig1601.3493.1|Name=mRNA_H-paniculata_contig1601.3493.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=162bp
AKEAAEKGASEARSRAEEEARRTSSLEDSLCRKEREMLVALERLDKLKLR
LQDVERSAREGEDDLRSMVRQRESEVERLTRRNGVLSEALSRLTTETDQD
GPRMEQKGAASSRDGALQRTDISSTSLVSQTSRSLGGACGSAISFDQNGS
PIIPRLGTGHDL
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