mRNA_H-paniculata_contig160.3482.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig160.3482.1 vs. uniprot
Match: D7G8Q7_ECTSI (Peptidylprolyl isomerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8Q7_ECTSI) HSP 1 Score: 290 bits (743), Expect = 1.660e-94 Identity = 149/242 (61.57%), Postives = 180/242 (74.38%), Query Frame = 3
Query: 99 SRSDMLRSLGLAGSAMVFGQALSGRPGPASA--EEDLPTVGKITKNGVKYFEYRVGSGEAPRWGQACVVRFVLYGRPKADANLLKIDASDNNGEPYLFKHGNGRQIKGMEEGLHSMRVGGKRRVIIPREMGYTVQGLGPYPANARNRDALVKVLKSFENSP-GELVMDVELLDVFDDEADQGYYEDETPNLEELQQIISDTGRFSTSS-FERLPGQVAFSTEDVVGATGDS-----PPEIGK 797
SR D+LRS+GL GSA++ GQALS R A EE++PTVGKITK G+KYF++RVG G +PRWGQ C++RF +YGR D L+KI +SDNN E YLFKHGNG QIKGMEEG+HSMRVGGKRRVI+P+ MGY+VQGLGPYPA+ R RD LV+VL SFE + GELVMD+ELLD FDDEADQGYYED E+LQ I+ +TGRFS E+LPGQ+A ED + P ++GK
Sbjct: 79 SRMDLLRSMGLVGSAVIGGQALSERAEAAGMQEEEEVPTVGKITKAGIKYFDFRVGEGPSPRWGQDCIIRFTMYGRSTPDEKLIKIQSSDNNKEKYLFKHGNGFQIKGMEEGMHSMRVGGKRRVIMPQSMGYSVQGLGPYPADPRKRDILVEVLTSFEKTTTGELVMDIELLDAFDDEADQGYYEDTAVTPEQLQDIVRETGRFSGGQPMEKLPGQLASPMEDTTSSAAKKGGAGLPGQLGK 320
BLAST of mRNA_H-paniculata_contig160.3482.1 vs. uniprot
Match: A0A835YXX3_9STRA (Peptidylprolyl isomerase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YXX3_9STRA) HSP 1 Score: 224 bits (570), Expect = 1.460e-69 Identity = 113/197 (57.36%), Postives = 147/197 (74.62%), Query Frame = 3
Query: 159 ALSGRPGPASAEE---DLPTVGKITKNGVKYFEYRVGSGEAPRWGQACVVRFVLYGRPKADANLLKIDASDNNGEPYLFKHGNGRQIKGMEEGLHSMRVGGKRRVIIPREMGYTVQGLGPYPANARNRDALVKVLKSFENSPGELVMDVELLDVFDDEADQGYYEDETPNLEELQQI--ISDTGRFSTSSFERLPGQ 734
+L+ RPG A A++ + TVGKITK+GVKYF+ GSG+ +WG+ C ++F LYGRP + L ++D+SDNNGEP+LFKHGNGRQIKG+EEG+H+MRVGGKRR+IIP +GYTV GLGP+PA A +R AL K+L S + G+LVMDVELLD FDDEAD GYY D + NLEE+Q + ++D + + LPGQ
Sbjct: 36 SLAIRPGSAQAKQSEYEAATVGKITKSGVKYFDAAEGSGDKIQWGKMCSIKFTLYGRPAQEGRLQRLDSSDNNGEPFLFKHGNGRQIKGLEEGMHTMRVGGKRRIIIPPTLGYTVSGLGPFPAGALSRMALDKMLDSLGTN-GQLVMDVELLDAFDDEADLGYYTDSSLNLEEMQDVMRVTDLLLDGKAKLQALPGQ 231
BLAST of mRNA_H-paniculata_contig160.3482.1 vs. uniprot
Match: W7TQC7_9STRA (Peptidylprolyl isomerase n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TQC7_9STRA) HSP 1 Score: 162 bits (409), Expect = 6.540e-44 Identity = 96/267 (35.96%), Postives = 150/267 (56.18%), Query Frame = 3
Query: 15 LHAKATGGERRRMDVIDYSN-CNILGDSSSRSDMLRSLGLAGSAMVFGQALSG------RPGPASA------EEDLPTVGKITKNGVKYFEYRVGSGEAPRWGQACVVRFVLYGRPKADANLLKIDASDNNGEPYLFKHGNGRQIKGMEEGLHSMRVGGKRRVIIPREMGYTVQGLGPYPANARNRDALVKVLKSFE--NSPGELVMDVELLDVFDDEADQGYYEDETPNLEELQQIISDTGRFSTSSFERLPGQVAFSTE-DVVGA 767
LH ++G + +++ I G S+R D LR L G S RP A A + DLP V TK+G++Y++ R G G +P+WGQ ++++ Y R + L+ D + PYL KHGNGR I+G++EG+HSM++GG RR+++P E+GYT GLGP P NA R LV+ L E + PGE++ DVEL+ ++DDEAD GYY+D T + LQ+ ++ + + ++P +F T+ +++G+
Sbjct: 82 LHDSSSGPRAASLRSSHHNSFARIKGSQSTRGDFLRQGLLTAGGAAMGAFFSPDPDFPRRPRHAHAAANRVQDMDLPAVAFETKSGLRYYDVRKGEGMSPKWGQVAIIQYEGYVRASPFSKLVLFDDTYARKTPYLVKHGNGRVIRGLDEGIHSMKLGGLRRIVVPLELGYTKTGLGPLPPNAFRRKILVRELGKAEVNDPPGEIIYDVELVSLYDDEADLGYYDDLTFDPGYLQEGMAKSLQELRDKGVKVPSTKSFMTKPEILGS 348
BLAST of mRNA_H-paniculata_contig160.3482.1 vs. uniprot
Match: A0A4D9D9B5_9STRA (Peptidylprolyl isomerase n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D9B5_9STRA) HSP 1 Score: 157 bits (397), Expect = 1.510e-43 Identity = 79/193 (40.93%), Postives = 125/193 (64.77%), Query Frame = 3
Query: 198 DLPTVGKITKNGVKYFEYRVGSGEAPRWGQACVVRFVLYGRPKADANLLKIDASDNNGEPYLFKHGNGRQIKGMEEGLHSMRVGGKRRVIIPREMGYTVQGLGPYPANARNRDALVKVLKSFE--NSPGELVMDVELLDVFDDEADQGYYEDETPNLEELQQIISDTGRFSTSSFERLPGQVAFSTE-DVVGA 767
DLP V TK+G++Y++ R G G +P+WGQ ++++ Y R + L+ D + PYL KHGNGR I+G++EG+HSM++GG RR+++P E+GYT GLGP P NA R LV+ L E + PGE++ DVEL+ ++DDEAD GYY+D T + LQ+ ++ + + ++P +F T+ +++G+
Sbjct: 29 DLPPVAFETKSGLRYYDVRKGEGMSPKWGQVAIIQYEGYVRASPFSKLVLFDDTYARKTPYLVKHGNGRVIRGLDEGIHSMKLGGLRRIVVPLELGYTKTGLGPLPPNAFRRKILVRELGKAEVNDPPGEIIYDVELVSLYDDEADLGYYDDLTFDPGYLQEGMAKSLQELRDKGVKVPSTKSFMTKPEILGS 221
BLAST of mRNA_H-paniculata_contig160.3482.1 vs. uniprot
Match: A0A7S2HMU8_9STRA (Peptidylprolyl isomerase n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2HMU8_9STRA) HSP 1 Score: 150 bits (379), Expect = 1.340e-40 Identity = 72/169 (42.60%), Postives = 109/169 (64.50%), Query Frame = 3
Query: 198 DLPTVGKITKNGVKYFEYRVGSGEAPRWGQACVVRFVLYGRPKADANLLKIDAS-DNNGEPYLFKHGNGRQIKGMEEGLHSMRVGGKRRVIIPREMGYTVQGLGPYPANARNRDALVKVLKSFENSPGELVMDVELLDVFDDEADQGYYEDETPNLEELQQIISDTGRF 701
+LP+ G +K+G+KYF+Y VG G P++GQ +V+++ + L D+S + G Y+ KHGNGR + G++EG+H+MRVGGKRR+++P +GYTV GLGP+P A +R L K+L ++S G + DV L+D +DD+AD GYY+D L Q+ + RF
Sbjct: 81 ELPSSGFASKSGMKYFDYEVGPGSPPKYGQVIIVKYIASAKATGKEKLQIFDSSFERGGGDYIMKHGNGRCVLGLDEGIHTMRVGGKRRILVPPNLGYTVPGLGPFPPEAADRRILNKILAKMDDS-GYVAFDVMLIDAYDDDADAGYYDDTDLPPGVLDQVYGNIERF 248
BLAST of mRNA_H-paniculata_contig160.3482.1 vs. uniprot
Match: A0A8J2WWV0_9STRA (Peptidylprolyl isomerase n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2WWV0_9STRA) HSP 1 Score: 142 bits (358), Expect = 8.350e-38 Identity = 80/192 (41.67%), Postives = 110/192 (57.29%), Query Frame = 3
Query: 129 LAGSAMVFGQALSGRPGPASAEE----DLPTV--GKITKNGVKYFEYRVGSGEAPRWGQACVVRFVLYGRPKADANLLKIDASDNNGEPYLFKHGNGRQIKGMEEGLHSMRVGGKRRVIIPREMGYTVQGLGPYPANARNRDALVKVLKSFENSPGELVM-DVELLDVFDDEADQGYYEDETPNLEELQQII 683
LAG+A P P + +LP G KNG+K+ + VG GE RWGQ +++V Y R DA L + DASD YL +HGNGR ++G++EG+H+MRVGG RRV +P +GYT GLGP P +A R L + L PG V+ DV +L + D+AD GYY DE+ + +E+Q I+
Sbjct: 27 LAGAAAAIACPARANPPPVDTDRVAVPELPQQPRGLKLKNGLKFTDGTVGPGEKLRWGQVVKIKYVAYTRESGDAPLKRYDASD----AYLVRHGNGRDVRGLDEGIHTMRVGGTRRVEVPPNLGYTAPGLGPMPESAGGRRTLDRALDDMAGKPGAAVVYDVAVLSAWTDDADAGYYADESFSGDEIQVIV 214
BLAST of mRNA_H-paniculata_contig160.3482.1 vs. uniprot
Match: A0A7S1U697_9STRA (Peptidylprolyl isomerase n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U697_9STRA) HSP 1 Score: 138 bits (348), Expect = 3.530e-36 Identity = 65/148 (43.92%), Postives = 97/148 (65.54%), Query Frame = 3
Query: 222 TKNGVKYFEYRVGSGEAPRWGQACVVRFVLYGRPKADANLLKIDASDNNGEPYLFKHGNGRQIKGMEEGLHSMRVGGKRRVIIPREMGYTVQGLGPYPANARNRDALVKVLKSFENSPGELVMDVELLDVFDDEADQGYYEDETPNLE 665
T++GVKY+E GSG P+WG +++F Y A+ +KI+ D NG Y+FKHGNGRQ++G+E+G+HSM++G RR+I+P + YT +GP P + N L L + N G+++ DV L++ F DEAD+GYY DETP ++
Sbjct: 80 TESGVKYYELTEGSGPTPQWGDTTIIKFTQYISRSANDEPVKIE--DWNGNNYVFKHGNGRQLEGLEDGIHSMKIGTTRRIIVPARLAYTTNQVGPLPRSTANLQKLTTELDAMVNG-GQIIFDVTLVNTFRDEADRGYYADETPAVD 224
BLAST of mRNA_H-paniculata_contig160.3482.1 vs. uniprot
Match: K0SEG5_THAOC (Peptidylprolyl isomerase n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0SEG5_THAOC) HSP 1 Score: 136 bits (342), Expect = 6.310e-35 Identity = 74/171 (43.27%), Postives = 108/171 (63.16%), Query Frame = 3
Query: 165 SGRPGPASAEEDLPTVGKITKNGVKYFEYRVGSGEAPRWGQACVVRFVLYGR-PKADANLLKIDASDNNGEPYLFKHGNGRQIKGMEEGLHSMRVGGKRRVIIPREMGYTVQGLGPYPANARNRDALVKVL-KSFENSPGELVMDVELLDVFDDEADQGYYEDETPNLEEL 671
S +P ++A ED V K T +G++Y E R GSGE+P++G + + Y + P +D D++ + YL KHGNGR I G++EGLH+M+VGGKRR+IIP ++GY GLGP P R L ++L K E G +V+DVE+ + +DEADQGYYED++ + E+
Sbjct: 90 STKPPTSTASEDGVRVFK-TNSGLQYIELREGSGESPKYGNFVTIAYRAYVKLPDTSEKKFDLDEFDSD-KAYLIKHGNGRTIPGLDEGLHTMKVGGKRRIIIPPKLGYVTNGLGPLPVGPYGRFKLYRLLEKMVEYRGGNVVVDVEMKSIMEDEADQGYYEDDSLSPEDF 258
BLAST of mRNA_H-paniculata_contig160.3482.1 vs. uniprot
Match: A0A7S4NDU7_9STRA (Peptidylprolyl isomerase n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4NDU7_9STRA) HSP 1 Score: 132 bits (332), Expect = 3.680e-33 Identity = 83/196 (42.35%), Postives = 112/196 (57.14%), Query Frame = 3
Query: 180 PASAEEDLPTVGKIT----KNGVKYFEYRVGSGEAPRWGQACVVRFVLYGR-PKADANLLKIDASDNNGEPYLFKHGNGRQIKGMEEGLHSMRVGGKRRVIIPREMGYTVQGLGPYPANARNRDALVKVL-KSFENSPGELVMDVELLDVFDDEADQGYYEDETPNLEE---LQQIISDTGRFS-TSSFERLPGQV 737
P A E P G +T K+G+KY E R GSG PR+GQ + + Y + P K+D D++ YL KHGNGR I G++EGLH+M++GGKRR+IIP ++GY G+GP P R L +L K E G +V DVEL DDEADQGYYED + + E+ L++ + G + TSSF Q+
Sbjct: 111 PGGAPE-APAGGGVTLFQTKSGLKYIELREGSGPTPRYGQLVSISYKAYVKLPDIKGQTQKLDEFDSD-RAYLIKHGNGRTIPGLDEGLHTMKIGGKRRIIIPPKLGYVSPGVGPIPEGPLARRKLNSLLDKMIEVRGGNVVFDVELRSAMDDEADQGYYEDGSLSPEDFDTLRKNLQQAGIDARTSSFRESQDQI 304
BLAST of mRNA_H-paniculata_contig160.3482.1 vs. uniprot
Match: A0A6U3SBH4_9STRA (Peptidylprolyl isomerase n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6U3SBH4_9STRA) HSP 1 Score: 129 bits (325), Expect = 4.740e-32 Identity = 78/199 (39.20%), Postives = 109/199 (54.77%), Query Frame = 3
Query: 183 ASAEEDLPTVGK----------ITKNGVKYFEYRVGSGEAPRWGQACVVRFVLYGR--------PKADANLLKIDASDNNGEPYLFKHGNGRQIKGMEEGLHSMRVGGKRRVIIPREMGYTVQGLGPYPANARNRDALVKVLKSF-ENSPGELVMDVELLDVFDDEADQGYYEDETPNLEELQQIISDTGRFSTSSFER 722
A+ E +PT TK+G+KY E R G+G P++GQ C + + Y + K L + D SDN +L KHGNGR + G++EGLH++RVGGKRR+I+P ++G+ GLGP P R L ++L E G LV DVEL FDDEADQGYYED + E+ Q + ++ R + E+
Sbjct: 109 AAPEASIPTASTSADEGGVKLFTTKSGLKYIELREGTGPTPKYGQLCSISYKAYIKLPDSVSSDKKISTKLQEFD-SDN---AFLVKHGNGRILPGLDEGLHTIRVGGKRRIIVPPKLGFVSNGLGPLPETPWGRYKLNQLLNQMVEVKGGNLVFDVELRSAFDDEADQGYYEDRSLTPEQFQTLRNNFERGAREEREK 303 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig160.3482.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig160.3482.1 >prot_H-paniculata_contig160.3482.1 ID=prot_H-paniculata_contig160.3482.1|Name=mRNA_H-paniculata_contig160.3482.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=250bp MDVIDYSNCNILGDSSSRSDMLRSLGLAGSAMVFGQALSGRPGPASAEEDback to top mRNA from alignment at H-paniculata_contig160:27355..36747- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig160.3482.1 ID=mRNA_H-paniculata_contig160.3482.1|Name=mRNA_H-paniculata_contig160.3482.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=9393bp|location=Sequence derived from alignment at H-paniculata_contig160:27355..36747- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig160:27355..36747- >mRNA_H-paniculata_contig160.3482.1 ID=mRNA_H-paniculata_contig160.3482.1|Name=mRNA_H-paniculata_contig160.3482.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1500bp|location=Sequence derived from alignment at H-paniculata_contig160:27355..36747- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |