prot_H-paniculata_contig15986.3470.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig15986.3470.1
Unique Nameprot_H-paniculata_contig15986.3470.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length122
Homology
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BLAST of mRNA_H-paniculata_contig15986.3470.1 vs. uniprot
Match: A0A6H5LBA6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LBA6_9PHAE)

HSP 1 Score: 90.9 bits (224), Expect = 7.880e-19
Identity = 40/67 (59.70%), Postives = 54/67 (80.60%), Query Frame = 0 
Query:    1 MAAPPIIGQCELVSGCSGERELTIITQQELEQLGSLQDVHLFVKLSGLRVGGLWCVECHQQLRDAAS 67
            M+  P +G C LV+GC+G++++T ITQ++L  LGSL+DV LFVKLS LRVGG+WC +CHQ L +AAS
Sbjct:    1 MSETPAVGPCGLVAGCAGDKQVTFITQEQLNGLGSLRDVDLFVKLSALRVGGIWCEDCHQLLFNAAS 67
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig15986.3470.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5LBA6_9PHAE7.880e-1959.70Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig15986contigH-paniculata_contig15986:5362..5727 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig15986.3470.1mRNA_H-paniculata_contig15986.3470.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig15986 3763..5727 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig15986.3470.1 ID=prot_H-paniculata_contig15986.3470.1|Name=mRNA_H-paniculata_contig15986.3470.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=122bp
MAAPPIIGQCELVSGCSGERELTIITQQELEQLGSLQDVHLFVKLSGLRV
GGLWCVECHQQLRDAASASHHHEPSASVVHQQVQHHGPAAVAHHQATAMQ
QQQQQPHHTQQQRQESGRKRDY
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