mRNA_H-paniculata_contig15976.3464.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig15976.3464.1
Unique NamemRNA_H-paniculata_contig15976.3464.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
BLAST of mRNA_H-paniculata_contig15976.3464.1 vs. uniprot
Match: D7FQ82_ECTSI (3-ketoacyl-(Acyl-carrier-protein) reductase, 3-oxoacyl-[acyl-carrier-protein] reductase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FQ82_ECTSI)

HSP 1 Score: 296 bits (759), Expect = 4.500e-99
Identity = 153/179 (85.47%), Postives = 163/179 (91.06%), Query Frame = 1
Query:    4 QVVNEIQGNGGKAVAVKADVSKIDDVQALFTAAAEAFPDEKIEILVNNAGITRDTLTLRMKPDMWQQVIDLNLSGVFYCSQAAAKLMLKQRTGRIVNISSIVGLIGNPGQANYAAAKAGVIGMTMSMAREFAGRGVTVNAVCPGFIESDMTAELDQDAIKKMIPLGRLGKPEEIAGIVK 540
            +VV  IQ  GGKA AVKADVSK D+V+ LF  AA AFPDEKIE++VNNAGITRDTLT+RMKPD WQ VIDLNLSGVFY SQAA KLMLKQR GRI+NISSIVGLIGNPGQANYAAAKAGVIGMTMSMAREFA RGVTVNAVCPGFIESDMTA+LDQDAIKKMIPLGRLGKP+EIAG+VK
Sbjct:   88 EVVKSIQEAGGKAAAVKADVSKTDEVKTLFADAAAAFPDEKIEVVVNNAGITRDTLTMRMKPDQWQSVIDLNLSGVFYVSQAACKLMLKQRKGRIINISSIVGLIGNPGQANYAAAKAGVIGMTMSMAREFAARGVTVNAVCPGFIESDMTADLDQDAIKKMIPLGRLGKPDEIAGMVK 266          
BLAST of mRNA_H-paniculata_contig15976.3464.1 vs. uniprot
Match: A0A835YXE5_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YXE5_9STRA)

HSP 1 Score: 260 bits (665), Expect = 1.830e-85
Identity = 130/177 (73.45%), Postives = 150/177 (84.75%), Query Frame = 1
Query:    7 VVNEIQGNGGKAVAVKADVSKIDDVQALFTAAAEAFPDEKIEILVNNAGITRDTLTLRMKPDMWQQVIDLNLSGVFYCSQAAAKLMLKQRTGRIVNISSIVGLIGNPGQANYAAAKAGVIGMTMSMAREFAGRGVTVNAVCPGFIESDMTAELDQDAIKKMIPLGRLGKPEEIAGIV 537
            VV +I+  GG+AVA++AD SK+ DV+A+F  A EAFP + +E+LVNNAGITRDTL LRMKPD WQ VIDLNL+GVFYCSQAAAK MLK+R GRIVNISS+VG IGNPGQANYAAAK GVI MT +M +EFA RGVTVNAVCPGFIESDMTA+L  DAIK MIP+ RLGK  E+AG+V
Sbjct:   42 VVADIKAKGGEAVAIQADCSKLADVEAMFKGAVEAFPGDNVEVLVNNAGITRDTLVLRMKPDQWQDVIDLNLTGVFYCSQAAAKTMLKKRAGRIVNISSVVGQIGNPGQANYAAAKGGVIAMTRTMGKEFASRGVTVNAVCPGFIESDMTADLQLDAIKAMIPMARLGKASEVAGLV 218          
BLAST of mRNA_H-paniculata_contig15976.3464.1 vs. uniprot
Match: X5CV96_9EUKA (FabG n=2 Tax=Eukaryota TaxID=2759 RepID=X5CV96_9EUKA)

HSP 1 Score: 241 bits (615), Expect = 3.680e-77
Identity = 126/182 (69.23%), Postives = 150/182 (82.42%), Query Frame = 1
Query:    4 QVVNEIQGNGGKAVAVKADVSKIDDVQALFTAAAEAFPDEKIEILVNNAGITRDTLTLRMKPDMWQQVIDLNLSGVFYCSQAAAKLMLKQRTGRIVNISSIVGLIGNPGQANYAAAKAGVIGMTMSMAREFAGRGVTVNAVCPGFIESDMTAELDQDAIK---KMIPLGRLGKPEEIAGIVK 540
            +VV EI+G GG  VAV+AD+S I+ + ALF A A+AFPD  +E+LVNNAGITRDTL LRMKP+ W+ VI+ NL+GVFY SQAAAK+MLK+R GRI+NI+S+VG IGNPGQANYAAAK GVI MTM+MA+EFA RGVTVNAV PGFI SDMT EL  D I+   K IP+GR GKPEE+AG+VK
Sbjct:   89 KVVEEIKGLGGDGVAVQADMSSIEGISALFEATAKAFPDP-VEVLVNNAGITRDTLVLRMKPNQWEDVINTNLNGVFYASQAAAKVMLKKRKGRIINIASVVGKIGNPGQANYAAAKGGVIAMTMTMAKEFASRGVTVNAVAPGFISSDMTDELPADIIEQVTKSIPVGRFGKPEEVAGLVK 269          
BLAST of mRNA_H-paniculata_contig15976.3464.1 vs. uniprot
Match: A0A2V3ICR5_9FLOR (3-oxoacyl-[acyl-carrier-protein] reductase n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ICR5_9FLOR)

HSP 1 Score: 239 bits (611), Expect = 1.840e-76
Identity = 124/179 (69.27%), Postives = 147/179 (82.12%), Query Frame = 1
Query:    4 QVVNEIQGNGGKAVAVKADVSKIDDVQALFTAAAEAFPDEKIEILVNNAGITRDTLTLRMKPDMWQQVIDLNLSGVFYCSQAAAKLMLKQRTGRIVNISSIVGLIGNPGQANYAAAKAGVIGMTMSMAREFAGRGVTVNAVCPGFIESDMTAELDQDAIKKMIPLGRLGKPEEIAGIVK 540
            +VV  I+ +GG A+AVK +VSK D V ALF AA + F   +I+++VNNAGITRDTL LRMK D WQ VIDLNL+GVF C+QAAAKLMLKQR+GRIVNI+S+VGLIGNPGQ NY AAKAGVIG+TMS A+E A RG+TVNAV PGFI SDMTA L  D IKKMIP+ R G+PEE+AG+V+
Sbjct:  101 EVVTTIKSSGGDAIAVKGNVSKSDQVDALFKAAKDHFG--RIDVVVNNAGITRDTLMLRMKQDQWQDVIDLNLTGVFLCTQAAAKLMLKQRSGRIVNITSVVGLIGNPGQVNYGAAKAGVIGLTMSAAKECASRGITVNAVAPGFINSDMTANLPVDDIKKMIPMNRFGEPEEVAGLVR 277          
BLAST of mRNA_H-paniculata_contig15976.3464.1 vs. uniprot
Match: A0A7S0I0W7_9CRYP (Hypothetical protein n=1 Tax=Hanusia phi TaxID=3032 RepID=A0A7S0I0W7_9CRYP)

HSP 1 Score: 237 bits (605), Expect = 5.490e-76
Identity = 127/180 (70.56%), Postives = 147/180 (81.67%), Query Frame = 1
Query:    7 VVNEIQGNGGKAVAVKADVSKIDDVQALFTAAAEAFPDEKIEILVNNAGITRDTLTLRMKPDMWQQVIDLNLSGVFYCSQAAAKLMLKQRTGRIVNISSIVGLIGNPGQANYAAAKAGVIGMTMSMAREFAGRGVTVNAVCPGFIESDMTAELD---QDAIKKMIPLGRLGKPEEIAGIV 537
            VV E++G G KA+AVKAD S    V A+F A AE+F DE I +LVNNAGITRDTL +RMK + W+ VID+NL GVF CSQAAAK+MLK+R GRI+NISS+VG IGNPGQANYAAAK GVIGMTMS A+EFAGRGVTVN VCPGFIESDMTAEL+    + +KKMIPLGRLG   E+AG+V
Sbjct:   66 VVKELEGMGVKAMAVKADTSDPAQVDAMFKAIAESF-DEPISVLVNNAGITRDTLVMRMKFEDWKSVIDVNLGGVFLCSQAAAKVMLKKRAGRIINISSVVGQIGNPGQANYAAAKGGVIGMTMSNAKEFAGRGVTVNCVCPGFIESDMTAELNAEYMEEVKKMIPLGRLGLASEVAGMV 244          
BLAST of mRNA_H-paniculata_contig15976.3464.1 vs. uniprot
Match: A0A7S1HNK2_HEMAN (Hypothetical protein n=2 Tax=Hemiselmis TaxID=77924 RepID=A0A7S1HNK2_HEMAN)

HSP 1 Score: 232 bits (591), Expect = 1.590e-73
Identity = 124/180 (68.89%), Postives = 143/180 (79.44%), Query Frame = 1
Query:    7 VVNEIQGNGGKAVAVKADVSKIDDVQALFTAAAEAFPDEKIEILVNNAGITRDTLTLRMKPDMWQQVIDLNLSGVFYCSQAAAKLMLKQRTGRIVNISSIVGLIGNPGQANYAAAKAGVIGMTMSMAREFAGRGVTVNAVCPGFIESDMTAELD---QDAIKKMIPLGRLGKPEEIAGIV 537
            V  EI G G KA+AVKAD S  DDV+A+F AAA+ F DE I +LVNNAGIT+DTL LRMK   +  VI++NL GVF CSQ A+K+MLK+R GRI+NISS+VG IGNPGQANYAAAK GVIGM MS A+EFA RGV VN VCPGFIESDMTAEL+    D +KKMIP+GRLGK  EIAG+V
Sbjct:   91 VAEEINGMGAKAIAVKADTSNADDVKAMFKAAADEF-DEPISVLVNNAGITKDTLMLRMKEGDFMDVININLKGVFLCSQEASKVMLKKRAGRIINISSVVGQIGNPGQANYAAAKGGVIGMMMSNAKEFAARGVKVNCVCPGFIESDMTAELNAEYMDEVKKMIPMGRLGKASEIAGMV 269          
BLAST of mRNA_H-paniculata_contig15976.3464.1 vs. uniprot
Match: Q00GM6_KARBR (Plastid beta-ketoacyl-ACP reductase protein n=1 Tax=Karenia brevis TaxID=156230 RepID=Q00GM6_KARBR)

HSP 1 Score: 232 bits (591), Expect = 4.580e-73
Identity = 123/182 (67.58%), Postives = 146/182 (80.22%), Query Frame = 1
Query:    4 QVVNEIQGNGGKAVAVKADVSKIDDVQALFTAAAEAFPDEKIEILVNNAGITRDTLTLRMKPDMWQQVIDLNLSGVFYCSQAAAKLMLKQRTGRIVNISSIVGLIGNPGQANYAAAKAGVIGMTMSMAREFAGRGVTVNAVCPGFIESDMTAELDQDAIK---KMIPLGRLGKPEEIAGIVK 540
            +VV EI+  GG  VAV+AD+S  + V  LF AAAEAF DE + +LVNNAGITRD LT+RMKP  W  VI+ NL+GVF+ +QAA+K+MLK+R GRI+NI+S+VG IGNPGQANYAAAK GVI MTMSMAREF  RG+TVNAV PGFIESDMTAEL Q+ +    K IPLGR GKPEE+AG+VK
Sbjct:  124 EVVEEIKKLGGDGVAVQADMSTKEGVDGLFKAAAEAF-DEPVGVLVNNAGITRDALTMRMKPAQWTDVINTNLNGVFFAAQAASKVMLKKRKGRIINIASVVGKIGNPGQANYAAAKGGVIAMTMSMAREFGSRGITVNAVAPGFIESDMTAELPQEIVDLQLKNIPLGRFGKPEEVAGLVK 304          
BLAST of mRNA_H-paniculata_contig15976.3464.1 vs. uniprot
Match: A0A4D9D9L3_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D9L3_9STRA)

HSP 1 Score: 230 bits (586), Expect = 8.280e-73
Identity = 117/180 (65.00%), Postives = 146/180 (81.11%), Query Frame = 1
Query:    1 MQVVNEIQGNGGKAVAVKADVSKIDDVQALFTAAAEAFPDEKIEILVNNAGITRDTLTLRMKPDMWQQVIDLNLSGVFYCSQAAAKLMLKQRTGRIVNISSIVGLIGNPGQANYAAAKAGVIGMTMSMAREFAGRGVTVNAVCPGFIESDMTAELDQDAIKKMIPLGRLGKPEEIAGIVK 540
            + VV EI+  G +AVA+KAD+SK ++V+ALF   A AF D  + ILVNNAGIT+D L + MKP+ WQ VID+NLSGVFY S+AAA +ML+ R GRI+N++S+VG IGNPGQANYAAAK GV+G+T + A+EFA RGVTVNAVCPGFIESDMT +LD D IKK IPLGRLG+  E+AG+V+
Sbjct:   88 LAVVEEIKALGSEAVAIKADMSKPEEVEALFKETAAAFKDP-VNILVNNAGITKDGLVMTMKPEAWQAVIDINLSGVFYASKAAASVMLRARRGRIINMASVVGQIGNPGQANYAAAKGGVLGLTKANAKEFAARGVTVNAVCPGFIESDMTEKLDLDGIKKAIPLGRLGRASEVAGMVR 266          
BLAST of mRNA_H-paniculata_contig15976.3464.1 vs. uniprot
Match: A0A7S0BVC7_9RHOD (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S0BVC7_9RHOD)

HSP 1 Score: 229 bits (583), Expect = 1.270e-72
Identity = 118/179 (65.92%), Postives = 143/179 (79.89%), Query Frame = 1
Query:    4 QVVNEIQGNGGKAVAVKADVSKIDDVQALFTAAAEAFPDEKIEILVNNAGITRDTLTLRMKPDMWQQVIDLNLSGVFYCSQAAAKLMLKQRTGRIVNISSIVGLIGNPGQANYAAAKAGVIGMTMSMAREFAGRGVTVNAVCPGFIESDMTAELDQDAIKKMIPLGRLGKPEEIAGIVK 540
            +VV  I+ +GG+A+AVK DVS+ +DV ALF A  E F    ++ILVNNAGITRDTL +RMK   WQ+VIDLNL+GV+ C Q A K+M+K++TGRIVNISS+VG IGNPGQ NYA+AKAGVIGMTM+ A+E   RG+TVNAV PGFIESDMT +L  D IKK IPL RLG PEE+AG+VK
Sbjct:   71 KVVETIKASGGQALAVKGDVSQSEDVDALFKATVEEFGT--VDILVNNAGITRDTLVMRMKKTQWQEVIDLNLTGVYLCLQEAVKIMMKKKTGRIVNISSVVGKIGNPGQVNYASAKAGVIGMTMATAKEVGSRGITVNAVAPGFIESDMTEDLPLDEIKKAIPLTRLGTPEEVAGLVK 247          
BLAST of mRNA_H-paniculata_contig15976.3464.1 vs. uniprot
Match: A0A7S3Z1W0_9EUKA (Hypothetical protein n=1 Tax=Lotharella globosa TaxID=91324 RepID=A0A7S3Z1W0_9EUKA)

HSP 1 Score: 230 bits (587), Expect = 2.080e-72
Identity = 122/182 (67.03%), Postives = 147/182 (80.77%), Query Frame = 1
Query:    4 QVVNEIQGNGGKAVAVKADVSKIDDVQALFTAAAEAFPDEKIEILVNNAGITRDTLTLRMKPDMWQQVIDLNLSGVFYCSQAAAKLMLKQRTGRIVNISSIVGLIGNPGQANYAAAKAGVIGMTMSMAREFAGRGVTVNAVCPGFIESDMTAELDQDAIK---KMIPLGRLGKPEEIAGIVK 540
            +VV EI+  GG  VAV AD+S ++ VQALF AA EA+ DE +EILVNNAGITRD L LRMKPD W  VI+ NL+GVFY  Q+AAK+MLK+R GRI+NI+S+VGLIGNPGQANYAAAK GVIGMTM+ A+EFA RGVTVN++ PGFIES+MT  L  + I+   K IPLGR GKPEE+AG+V+
Sbjct:  129 KVVEEIKQLGGDGVAVAADMSTMEGVQALFKAAGEAY-DEPVEILVNNAGITRDNLVLRMKPDQWTDVINTNLNGVFYALQSAAKVMLKKRKGRIINIASVVGLIGNPGQANYAAAKGGVIGMTMATAKEFAARGVTVNSIAPGFIESEMTQALKPEIIETVTKGIPLGRFGKPEEVAGLVR 309          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig15976.3464.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FQ82_ECTSI4.500e-9985.473-ketoacyl-(Acyl-carrier-protein) reductase, 3-oxo... [more]
A0A835YXE5_9STRA1.830e-8573.45Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
X5CV96_9EUKA3.680e-7769.23FabG n=2 Tax=Eukaryota TaxID=2759 RepID=X5CV96_9EU... [more]
A0A2V3ICR5_9FLOR1.840e-7669.273-oxoacyl-[acyl-carrier-protein] reductase n=1 Tax... [more]
A0A7S0I0W7_9CRYP5.490e-7670.56Hypothetical protein n=1 Tax=Hanusia phi TaxID=303... [more]
A0A7S1HNK2_HEMAN1.590e-7368.89Hypothetical protein n=2 Tax=Hemiselmis TaxID=7792... [more]
Q00GM6_KARBR4.580e-7367.58Plastid beta-ketoacyl-ACP reductase protein n=1 Ta... [more]
A0A4D9D9L3_9STRA8.280e-7365.00Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]
A0A7S0BVC7_9RHOD1.270e-7265.92Hypothetical protein n=1 Tax=Rhodosorus marinus Ta... [more]
A0A7S3Z1W0_9EUKA2.080e-7267.03Hypothetical protein n=1 Tax=Lotharella globosa Ta... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig15976contigH-paniculata_contig15976:1799..5004 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score300.1
Seed ortholog evalue7.2e-79
Seed eggNOG ortholog2880.D7FQ82
KEGG rclassRC00029,RC00117
KEGG koko:K00059
KEGG ReactionR04533,R04534,R04536,R04543,R04566,R04953,R04964,R07759,R07763,R10116,R10120,R11671
KEGG Pathwayko00061,ko00333,ko00780,ko01040,ko01100,ko01130,ko01212,map00061,map00333,map00780,map01040,map01100,map01130,map01212
KEGG ModuleM00083,M00572
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0003824,GO:0004312,GO:0004316,GO:0005488,GO:0005507,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0008150,GO:0008152,GO:0009507,GO:0009526,GO:0009532,GO:0009536,GO:0009570,GO:0009941,GO:0016491,GO:0016614,GO:0016616,GO:0016740,GO:0016746,GO:0016747,GO:0031967,GO:0031975,GO:0043167,GO:0043169,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044422,GO:0044424,GO:0044434,GO:0044435,GO:0044444,GO:0044446,GO:0044464,GO:0046872,GO:0046914,GO:0055114
EggNOG free text desc.3-oxoacyl-[acyl-carrier-protein] reductase (NADH) activity
EggNOG OGsCOG1028@1,KOG1200@2759
Ec32 ortholog description3-ketoacyl-(acyl-carrier-protein) reductase, 3-oxoacyl-[acyl-carrier-protein] reductase.
Ec32 orthologEc-01_007100.1
EC1.1.1.100
COG Functional cat.IQ
BiGG ReactioniRC1080.CRv4_Au5_s3_g10590_t1
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko01004
Exons4
Model size543
Cds size543
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig15976.3464.1prot_H-paniculata_contig15976.3464.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig15976 1799..5004 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929276.6750932-CDS-H-paniculata_contig15976:1798..19871622929276.6750932-CDS-H-paniculata_contig15976:1798..1987Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig15976 1799..1987 -
1691480797.1594248-CDS-H-paniculata_contig15976:1798..19871691480797.1594248-CDS-H-paniculata_contig15976:1798..1987Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig15976 1799..1987 -
1622929276.7101905-CDS-H-paniculata_contig15976:2475..26251622929276.7101905-CDS-H-paniculata_contig15976:2475..2625Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig15976 2476..2625 -
1691480797.1743414-CDS-H-paniculata_contig15976:2475..26251691480797.1743414-CDS-H-paniculata_contig15976:2475..2625Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig15976 2476..2625 -
1622929276.7268195-CDS-H-paniculata_contig15976:3062..31341622929276.7268195-CDS-H-paniculata_contig15976:3062..3134Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig15976 3063..3134 -
1691480797.1825953-CDS-H-paniculata_contig15976:3062..31341691480797.1825953-CDS-H-paniculata_contig15976:3062..3134Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig15976 3063..3134 -
1622929276.7376575-CDS-H-paniculata_contig15976:4872..50041622929276.7376575-CDS-H-paniculata_contig15976:4872..5004Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig15976 4873..5004 -
1691480797.1901631-CDS-H-paniculata_contig15976:4872..50041691480797.1901631-CDS-H-paniculata_contig15976:4872..5004Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig15976 4873..5004 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig15976.3464.1

>prot_H-paniculata_contig15976.3464.1 ID=prot_H-paniculata_contig15976.3464.1|Name=mRNA_H-paniculata_contig15976.3464.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=181bp
MQVVNEIQGNGGKAVAVKADVSKIDDVQALFTAAAEAFPDEKIEILVNNA
GITRDTLTLRMKPDMWQQVIDLNLSGVFYCSQAAAKLMLKQRTGRIVNIS
SIVGLIGNPGQANYAAAKAGVIGMTMSMAREFAGRGVTVNAVCPGFIESD
MTAELDQDAIKKMIPLGRLGKPEEIAGIVK*
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mRNA from alignment at H-paniculata_contig15976:1799..5004-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig15976.3464.1 ID=mRNA_H-paniculata_contig15976.3464.1|Name=mRNA_H-paniculata_contig15976.3464.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=3206bp|location=Sequence derived from alignment at H-paniculata_contig15976:1799..5004- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGCAGGTCGTGAACGAGATCCAAGGCAATGGCGGCAAGGCAGTGGCGGT GAAGGCGGACGTGTCCAAGATAGATGACGTGCAAGCGCTCTTCACTGCAG CCGCGGAGGCATTCCCGGACGAGAAGATAGAGGTAAGGCGGCTGACCTAT GGGTAAACCAGACGAAACACTCTGTAGTGTACTGTGCACTGTCATTCGGT GTCCTTTTTAATACTGACTCTAAAAATCCCTTGCAACCAACCTGCCTGGA TGTGCTTCTAACTGCGTGCTAACGGTAGAAATACGTGCAATAGATGGATT AGCAAAGTCCAGCCCACCCTGGATAGCTCAAAAAGCAGGCACAATATACC GTCATATACGCGCGGAGTCCCCACATATGATTGCTGAAACAATGGCTGAG GTGTCTTCTTGAGGTGTCGTAATACGCTGCTTTGGCGAGAGCTGCTGCAA GTGTGGCTATTTGAAAAAAGATGGTAATGTCGACAAAAATTGAAGGATTG TGTGTCTGTAAAACTGTCGTTGAATGGATCTGTGTAAATCAGCACCATAA CCAAGCAAGTGGGAAACAGTGCGTTGTACCAACTGTCGTGAAAACGTCAG GTTCCTCCCATGCACCTACTGTGTACGATTTTATTTGCTGCGGCGAAATC GCGCAGGAGATGAGCTGTTCATGTACCCAAAAATTCCGGGTCCGGCCGAA GTTACATACTTCATGCACCATGCACCAGTCGGCAATGGCGCCACATGACA ATCTTCTTCTGCCCCCCCTTGAGCAATGTTGGAACCTCAACTACAGCTCG CGAGTCCTTGCTGTCATTATTTAATACGTGGTAATTGGTAAGGTAGTCGT CGTTTCAGAATAGCTTGCTAATACTGTACCCAAGTAACTCGTGAAAAGAA ATCTTGATTCGAGCACGGGAAGTTCGTGAGTCGAGGCTGAACACAGACTG CACACGAGTGTAGCTGTAGTTCTACCTTAAGTATCGAGTACTGCAGCTGT CTAATAGCCGGTCTTACATGTTGAACGAAATTCGGTCGTTCTGTGTGTCA CCTGTTGAGGTGCCGCGGTAGAACAAGGTTGTAAGCGGAATAGAAGCGGA GCAACTGTCAGGATCTAGGATGCATTCGACTTATACCGCATCCCCCCATC CTCCATTCCATCACCCCTACCGGCGCGAAAGAGTGGGAGGCTTGGCAACC CAGCCAGCTCCCAGGGACGTTGCGTGCCGAGATGAACGATGAGCATATTC GAGCCGATTCACCTTTTTGGTGTGGTCGGTTTTAGGTGTGCTTGTTTTAC CTGTCTTCAAGATGCCTTCAGTGCATGCGCTGTACAAGCGCCGTTGCCTG TGGGGCATAATCGATTAGGCACATTGCCATTGCCCCCCCCCCCCGGAGGA AAGAGCGATTGGCAATTATATCGTTCTGATAAGAACAATGCTCCATCCTC CCGAGGACGAGTGGTCAATTGTGTAACAGACTACGGCATGCAAAACATGA CTACGCCCCCCTACCGATTGAGGTTGAGGTTGTCTCTCGTGAGAAAAGCG CTGTATAGGTGGGCAACATATAGTCAGCCGGAGTGCCCAATGAACCCATG GACCATGGCAAAATTTGGCCTGTAGTACTGTAGCAACGCATGTATGGTGA CTACAACTGGCGGCTAGAGTAAAACCCCTGTTCTGAAAGTAGCTCTGCCG GGAGAAATAGCATTATGTCTTATGGAAGAACATGTAATAAAGAGGGGAAA TAGTGCCTAGAGTTGATTTCAGTCCTCAGTCGCGCCATCTCGCTATAGCG TATCTTTGTATGTGCTTACGTCGGCTGGTGTCGTTCGTGGTGGTCGTGTC ATAATGCTGTTTACTGGCAGATTCTCGTGAACAACGCTGGTATTACGAGA GATACGCTGACTTTGCGGATGAAGCCCGACATGTGGCAGCAGGTATGTAC GCAGTCGAGTGTACTTCAGGTATGGAGCGTTCTCAGTTTTGGCACACACG TACACACACACAAACGAAGCGTTTCATCTCTACCTTTTCGCGGAACAAGG ATCAAACGCTAGCATACAGGTTTCTTGATATTTTTCAATGCGCTAAAAGC TGTTTTTTGTTTCTCAGGAATTTTGGGTGTCTCGGCTGACGAAGGTTCCT TCGGTCCTGTGATCCTTTTGTGCCCAGCGCCTGTCGAAAAATACCTGTTT TTCAACTTTTGTTTTTTTTGTGAATTCATTCCGTCACAAGGTCTTCAGTA TGTATTTGTAAGGACTATTTAGCACACATGAGCACCTCGTCGACCATCCT GTTGGGTCTCTCTTTTCCCCTTCGGCGTTTTTCTCTCTGCTTTCCTACCT CTCTTTCTCGGTTTTGGTCCCTTGATCAGGTGATCGACCTCAACCTGAGC GGAGTGTTTTACTGCTCTCAGGCGGCGGCCAAGCTTATGCTCAAGCAGCG TACGGGGCGCATCGTTAACATCTCATCCATCGTGGGCCTCATCGGCAACC CCGGACAGGCCAACTATGCTGCCGCCAAGGTGTGGCAGATTTTGTTTTTT TTCTAACCCTCCAATGACAGTGACGAGCATGTTTTTGGATCTTCAACTGT ATTTCTAGGTACATGAACGATCAAGCGTGCAAGTTATATTAAATTAAGAG CAACAGATATCAACCACATTACAAAGCTACTTTCTTTGTAGGTGATATTA TCAAGAGAAATTGTATGACGGGTTAGGAGATGGTGAACGAACAGGATATG TGACCCGTCTCTATTGGTGAAGAGCTTTACGGGAACCTTGACGGGTATAT GTAGTTTTTGGTTGAATAAAATATGCAAATATGAACACACGAGCGCCACG AACGTCGACAATGACGATTGTGTACTGCAGACAAACGGCAAAAACAGAGA AAATCGATAAGAAAATGCTAATTTAAGAGAAGAGTGACAAGAGGTTCGAA ACTGCCGTTAGCTATGCAAAATGTTCTAGTATACACTCTCCCTTTCTCTT CTACGTGTGCCTGGTAGGCTGGAGTGATCGGCATGACGATGTCTATGGCT AGGGAGTTCGCAGGAAGAGGCGTGACCGTTAACGCAGTGTGCCCAGGTTT CATCGAGAGCGATATGACGGCTGAGCTTGACCAGGACGCCATCAAGAAGA TGATTCCTTTGGGCAGGCTGGGCAAGCCGGAGGAAATCGCGGGTATTGTC AAGTGA
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Coding sequence (CDS) from alignment at H-paniculata_contig15976:1799..5004-

>mRNA_H-paniculata_contig15976.3464.1 ID=mRNA_H-paniculata_contig15976.3464.1|Name=mRNA_H-paniculata_contig15976.3464.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1086bp|location=Sequence derived from alignment at H-paniculata_contig15976:1799..5004- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGCAGGTCGTGAACGAGATCCAAGGCAATGGCGGCAAGGCAGTGGCGGT
GAAGGCGGACGTGTCCAAGATAGATGACGTGCAAGCGCTCTTCACTGCAG
CCGCGGAGGCATTCCCGGACGAGAAGATAGAGATGCAGGTCGTGAACGAG
ATCCAAGGCAATGGCGGCAAGGCAGTGGCGGTGAAGGCGGACGTGTCCAA
GATAGATGACGTGCAAGCGCTCTTCACTGCAGCCGCGGAGGCATTCCCGG
ACGAGAAGATAGAGATTCTCGTGAACAACGCTGGTATTACGAGAGATACG
CTGACTTTGCGGATGAAGCCCGACATGTGGCAGCAGATTCTCGTGAACAA
CGCTGGTATTACGAGAGATACGCTGACTTTGCGGATGAAGCCCGACATGT
GGCAGCAGGTGATCGACCTCAACCTGAGCGGAGTGTTTTACTGCTCTCAG
GCGGCGGCCAAGCTTATGCTCAAGCAGCGTACGGGGCGCATCGTTAACAT
CTCATCCATCGTGGGCCTCATCGGCAACCCCGGACAGGCCAACTATGCTG
CCGCCAAGGTGATCGACCTCAACCTGAGCGGAGTGTTTTACTGCTCTCAG
GCGGCGGCCAAGCTTATGCTCAAGCAGCGTACGGGGCGCATCGTTAACAT
CTCATCCATCGTGGGCCTCATCGGCAACCCCGGACAGGCCAACTATGCTG
CCGCCAAGGCTGGAGTGATCGGCATGACGATGTCTATGGCTAGGGAGTTC
GCAGGAAGAGGCGTGACCGTTAACGCAGTGTGCCCAGGTTTCATCGAGAG
CGATATGACGGCTGAGCTTGACCAGGACGCCATCAAGAAGATGATTCCTT
TGGGCAGGCTGGGCAAGCCGGAGGAAATCGCGGGTATTGTCAAGTGAGCT
GGAGTGATCGGCATGACGATGTCTATGGCTAGGGAGTTCGCAGGAAGAGG
CGTGACCGTTAACGCAGTGTGCCCAGGTTTCATCGAGAGCGATATGACGG
CTGAGCTTGACCAGGACGCCATCAAGAAGATGATTCCTTTGGGCAGGCTG
GGCAAGCCGGAGGAAATCGCGGGTATTGTCAAGTGA
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