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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Ec32 ortholog description | PHD-type zinc finger protein |
| Ec32 ortholog | Ec-09_003920.1 |
| Exons | 4 |
| Model size | 939 |
| Cds size | 939 |
| Stop | 0 |
| Start | 0 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig15973.3463.1 >prot_H-paniculata_contig15973.3463.1 ID=prot_H-paniculata_contig15973.3463.1|Name=mRNA_H-paniculata_contig15973.3463.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=313bp
GGVDGREEGAAAPDEAVMVSGGGGEGMSGCSRKDFRPNSGGVEGLSSCSS
LSSSSSSVSSCSREGAGCDPPRFRLSEFYAGGGGSETGSGSGDGDERGQG
LGLEEMVQGETTAEDVLMEMKEDDVAEIDRISSEQTVEMQRLQLEEEIAD
ARVAVEEAVAVVGIEFPSRQKGPRDRDAQCQLCPVPGGAFLRASKGKARG
RGMGWCHCLCALSLQLPMRNRVVQTKGYGPREKGQVTGPPCSLCKKAGRG
AMIPCAERGCPAKFHPLCGKDYGGSAHRGPQIPTKCWTARCPAHAWVAVE
AAGAGARVRTGAR back to topmRNA from alignment at H-paniculata_contig15973:2196..4705+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_H-paniculata_contig15973.3463.1 ID=mRNA_H-paniculata_contig15973.3463.1|Name=mRNA_H-paniculata_contig15973.3463.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=2510bp|location=Sequence derived from alignment at H-paniculata_contig15973:2196..4705+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
GGCGGTGTTGATGGCAGGGAGGAAGGTGCCGCCGCCCCAGACGAAGCGGT
GATGGTTTCGGGTGGGGGAGGGGAGGGGATGAGCGGTTGTTCTCGGAAGG
ATTTTCGACCAAATTCTGGTGGCGTTGAAGGTTTATCGAGTTGTTCATCT
CTGTCGTCGTCTTCGTCTTCTGTTTCTTCTTGTTCTCGGGAAGGCGCTGG
TTGTGACCCTCCGAGGTTTCGGCTTTCAGAGTTTTATGCCGGCGGCGGCG
GCAGCGAGACGGGAAGTGGGAGTGGAGATGGTGACGAGCGCGGGCAGGGT
CTTGGTCTGGAAGAGATGGTACAAGGAGAAACAACGGCGGAGGATGTCTT
GATGGAGATGAAGGAAGATGATGTAGCGGAGATCGATCGGATTTCGTCCG
AACAGACAGTAGAGGTGAGAAAGTCAATTCGCCTTTTTTGTGCCACTGAA
TTTTTGGTCTGTTTGTAGATTGAGTCACTCAGTCAGGTTGAAAAATTACG
GAGGGCGGGTGCATGAACCTCCAGGTTGGGTGGATGATGGTCAGCATTTA
GTGCGGCATATTTTTCCTGTACTTTGTATATATGTATATTATTCTGTTAC
CTGAACTTTTTTTTCTTTTTTTCAATTTGTATCTGTTTTCACCCATGGTT
CATTAAAAAAAAAAAATCTACGATGCTGGTAACCTTTGAATGCAATGCTC
ATCAACATCCCTCTTTTCTTCTGGTGTGTGTGTGTGTGTATTTTATCATT
GCCCGTAATGCTCCTCGCGGAATCCCCAGATGCAGCGTCTGCAGCTGGAA
GAAGAAATTGCGGACGCGAGAGTTGCAGTGGAAGAGGCAGTAGCGGTAAG
TCGACGATAGCGATGGCAGCGGGCGGGGCGGACCCAGGGGGGTGTCATGT
TGAGATTGTACAGCTTATTTCAGACTTAAGTTGTTTACACTTACTAGCAA
ATTTTTGAAGATGACCAATAGAAGGGGGTTACTCATGTCCTGCATGTTGT
AATCGTTACACTATTGACCGCGCGTCCTCGCGAGGACGGACAGAGCTTTG
TTCCAATCAGAGTGATTTCCGATGGCCAATCGCTCTGAGAGGAGAAGGGG
GGTGGGGGGGGGGGAGTTTGCACATGAACAACGGGAAAAAAACCCCAAAA
AATCCTATGCACCCACCAGGATTATTATTTGTGAGTTAACCCACGTGCCT
CTGTTGAGTTATAGATGTGACGATAATTTAATAACTCCAGTGTACTTTTG
CTGATTCTGTGTCTTTTCGCCCTTACTTCTATTGGTCTTTTTCATTTCTA
CTTTTCTTTTTTAACGGTGTCTCTTCCCTGGATTTTGTTTCCCCCCATCT
GATGATTATTGACATGATTCGATGATATCATGTTTTTATGCTCCTTAAGT
TCACTCATCAAGTCGGTCTGCACCCTGCCCCCCCCTCCCCCCGGGCATCA
GGTGGTAGGCATAGAGTTCCCATCGCGACAGAAGGGACCAAGGGACAGAG
ACGCGCAGTGCCAGCTGTGCCCTGTTCCAGGCGGAGCGTTCCTCCGCGCT
TCCAAGGGCAAGGCTCGTGGCAGGGGGATGGGATGGTGCCACTGCCTGTG
CGCACTATCACTTCAGCTCCCCATGAGGAATCGAGTGGTACAGGTGAGTA
AAAAAAAACAAGAACTCGTGAAACACGCATTCGTGCTCTAAAGAACCACC
GTATGTATTTTAAGAGTATTGAAATATATTGCTATGGCCCGTGTTGTTGT
TGTTGTTGTTGTTGTTGTCACGTGTGTGCCTTTCTGTGCTACGTCAACTT
GAACCTTCAGGGCCTGGACTTTGTAACGATCAACAAATCAATTCATAATC
AATCAGTTTGAAAATACGCATTTTTGTTGAAGTCCCATCACTCTAAATGT
CTTCATTTTTTTGTGGAGTCAGTCATTATCATCACTACCTAGTATCATTG
GTACAAGCGTACCTCCAGTTTTGATTGCATGTGTACATGCATGTGCATGT
TCATGTTTTCGATTTGATCCCCACCCCCCCCCACCCCACCCCAAGCTTGT
GACCCCCTCCACCAAAGAGGGTAGATGAAAGATTTTTGAGCCGCTTTTGG
CAACAAATTAAGAAAACAACGGTTAGCTGTCTGAAATCGGACTGATGCAA
AGCTCCGCCCTCCCGACTACGAACAACTACGCCATGCAAAACGCGAGCCC
CGCCGCCGCCTCCTCCCTTAATCCCGATCTACGCAACCATTAGACGAAGG
GGTATGGACCGAGAGAGAAGGGACAGGTGACGGGCCCACCGTGTAGCTTG
TGCAAAAAGGCTGGCCGAGGCGCCATGATCCCCTGCGCCGAGCGAGGGTG
CCCCGCCAAATTCCACCCCTTGTGCGGGAAGGACTATGGAGGCAGCGCCC
ACCGGGGGCCTCAAATTCCTACCAAGTGTTGGACGGCGCGTTGCCCGGCG
CACGCATGGGTGGCAGTTGAGGCAGCGGGAGCAGGGGCTAGGGTCAGGAC
AGGGGCGAGG back to topCoding sequence (CDS) from alignment at H-paniculata_contig15973:2196..4705+ >mRNA_H-paniculata_contig15973.3463.1 ID=mRNA_H-paniculata_contig15973.3463.1|Name=mRNA_H-paniculata_contig15973.3463.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1878bp|location=Sequence derived from alignment at H-paniculata_contig15973:2196..4705+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
GGCGGTGTTGATGGCAGGGAGGAAGGTGCCGCCGCCCCAGACGAAGCGGT
GATGGTTTCGGGTGGGGGAGGGGAGGGGATGAGCGGTTGTTCTCGGAAGG
ATTTTCGACCAAATTCTGGTGGCGTTGAAGGTTTATCGAGTTGTTCATCT
CTGTCGTCGTCTTCGTCTTCTGTTTCTTCTTGTTCTCGGGAAGGCGCTGG
TTGTGACCCTCCGAGGTTTCGGCTTTCAGAGTTTTATGCCGGCGGCGGCG
GCAGCGAGACGGGAAGTGGGAGTGGAGATGGTGACGAGCGCGGGCAGGGT
CTTGGTCTGGAAGAGATGGTACAAGGAGAAACAACGGCGGAGGATGTCTT
GATGGAGATGAAGGAAGATGATGTAGCGGAGATCGATCGGATTTCGTCCG
AACAGACAGTAGAGGGCGGTGTTGATGGCAGGGAGGAAGGTGCCGCCGCC
CCAGACGAAGCGGTGATGGTTTCGGGTGGGGGAGGGGAGGGGATGAGCGG
TTGTTCTCGGAAGGATTTTCGACCAAATTCTGGTGGCGTTGAAGGTTTAT
CGAGTTGTTCATCTCTGTCGTCGTCTTCGTCTTCTGTTTCTTCTTGTTCT
CGGGAAGGCGCTGGTTGTGACCCTCCGAGGTTTCGGCTTTCAGAGTTTTA
TGCCGGCGGCGGCGGCAGCGAGACGGGAAGTGGGAGTGGAGATGGTGACG
AGCGCGGGCAGGGTCTTGGTCTGGAAGAGATGGTACAAGGAGAAACAACG
GCGGAGGATGTCTTGATGGAGATGAAGGAAGATGATGTAGCGGAGATCGA
TCGGATTTCGTCCGAACAGACAGTAGAGATGCAGCGTCTGCAGCTGGAAG
AAGAAATTGCGGACGCGAGAGTTGCAGTGGAAGAGGCAGTAGCGATGCAG
CGTCTGCAGCTGGAAGAAGAAATTGCGGACGCGAGAGTTGCAGTGGAAGA
GGCAGTAGCGGTGGTAGGCATAGAGTTCCCATCGCGACAGAAGGGACCAA
GGGACAGAGACGCGCAGTGCCAGCTGTGCCCTGTTCCAGGCGGAGCGTTC
CTCCGCGCTTCCAAGGGCAAGGCTCGTGGCAGGGGGATGGGATGGTGCCA
CTGCCTGTGCGCACTATCACTTCAGCTCCCCATGAGGAATCGAGTGGTAC
AGGTGGTAGGCATAGAGTTCCCATCGCGACAGAAGGGACCAAGGGACAGA
GACGCGCAGTGCCAGCTGTGCCCTGTTCCAGGCGGAGCGTTCCTCCGCGC
TTCCAAGGGCAAGGCTCGTGGCAGGGGGATGGGATGGTGCCACTGCCTGT
GCGCACTATCACTTCAGCTCCCCATGAGGAATCGAGTGGTACAGACGAAG
GGGTATGGACCGAGAGAGAAGGGACAGGTGACGGGCCCACCGTGTAGCTT
GTGCAAAAAGGCTGGCCGAGGCGCCATGATCCCCTGCGCCGAGCGAGGGT
GCCCCGCCAAATTCCACCCCTTGTGCGGGAAGGACTATGGAGGCAGCGCC
CACCGGGGGCCTCAAATTCCTACCAAGTGTTGGACGGCGCGTTGCCCGGC
GCACGCATGGGTGGCAGTTGAGGCAGCGGGAGCAGGGGCTAGGGTCAGGA
CAGGGGCGAGGACGAAGGGGTATGGACCGAGAGAGAAGGGACAGGTGACG
GGCCCACCGTGTAGCTTGTGCAAAAAGGCTGGCCGAGGCGCCATGATCCC
CTGCGCCGAGCGAGGGTGCCCCGCCAAATTCCACCCCTTGTGCGGGAAGG
ACTATGGAGGCAGCGCCCACCGGGGGCCTCAAATTCCTACCAAGTGTTGG
ACGGCGCGTTGCCCGGCGCACGCATGGGTGGCAGTTGAGGCAGCGGGAGC
AGGGGCTAGGGTCAGGACAGGGGCGAGG back to top
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