mRNA_H-paniculata_contig15964.3459.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig15964.3459.1 vs. uniprot
Match: D8LTW4_ECTSI (Fructose-bisphosphatase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LTW4_ECTSI) HSP 1 Score: 377 bits (967), Expect = 1.380e-124 Identity = 200/273 (73.26%), Postives = 220/273 (80.59%), Query Frame = 1
Query: 226 RPRERVTLGRFMIQSCVGSPETEAMLPIMKAVGKTCTAVSGLVRRAQVEGMAGLHQEG-----TNGDYAAGSMNVQGEVQKELDVLSNRIFLTGLCQPHDMSCVASEEEEYPRMCSKVVGEETHGGEYAAVFDPLDGSANIEAGLPCGTIFGILRTSGSAREGRTAGPSTIVLSGRRLVAAGYCLYGPSTKLVFTLGSGVFEFTLDEDV-WGGSGANAGTERRGGGLGGGTLEFVLSRSNMRIPSSGKLYSVNEANSPSWPEAIQDFFLDFKT 1026
RP R TLG FM+++ SP+ EAM+PIMK+VGKTCTAVS LVRRAQ+EGMAGLHQ+G +NVQGEVQKELDVLSN IFLTG CQP MSCVASEEEE PRMC+ VVG+E HGGEYAAVFDPLDGSANIEAGLPCGTIFGILR SGSAREGR AGPST+VL GRRLVAAGYCLYGPSTKLVFTLG+GVFEFTL +V GG+G GGLGGG L+FVL+RSN+RIP SG +YSVNEANS SW EAIQD+F D KT
Sbjct: 133 RPVPRTTLGTFMVETRSRSPDMEAMVPIMKSVGKTCTAVSRLVRRAQIEGMAGLHQDGGXXXXXXXXXXXXXVNVQGEVQKELDVLSNSIFLTGFCQPGGMSCVASEEEETPRMCAAVVGDEKHGGEYAAVFDPLDGSANIEAGLPCGTIFGILRASGSAREGRKAGPSTVVLPGRRLVAAGYCLYGPSTKLVFTLGAGVFEFTLRGEVAQGGAGE--------GGLGGGELDFVLTRSNLRIPRSGNVYSVNEANSVSWSEAIQDYFQDLKT 397
BLAST of mRNA_H-paniculata_contig15964.3459.1 vs. uniprot
Match: A0A6H5K7J4_9PHAE (Fructose-bisphosphatase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K7J4_9PHAE) HSP 1 Score: 390 bits (1003), Expect = 3.120e-120 Identity = 226/352 (64.20%), Postives = 255/352 (72.44%), Query Frame = 1
Query: 13 GFVIRPQVWKSFKEEQKEVTGALL----ENA-GEKISGSAIKLIEASG--SAIINSGAQVQEGKGVTTDRSAAEAATGRPRERVTLGRFMIQSCVGSPETEAMLPIMKAVGKTCTAVSGLVRRAQVEGMAGLHQEGTNGDYAAG-----SMNVQGEVQKELDVLSNRIFLTGLCQPHDMSCVASEEEEYPRMCSKVVGEETHGGEYAAVFDPLDGSANIEAGLPCGTIFGILRTSGSAREGRTAGPSTIVLSGRRLVAAGYCLYGPSTKLVFTLGSGVFEFTLDEDVWGGSGANAGTERRGG--GLGGGTLEFVLSRSNMRIPSSGKLYSVNEANSPSWPEAIQDFFLDFKT 1026
G +I P VW +FKEEQK VT LL +NA G++ G A E +G S + N + E + R E RP R+TLG FM ++ SP+ EAM+PIMK+VGKTCTAVS LVRRAQ+EGMAGLHQ+ S+NVQGEVQKELDVLSN IFLTG CQP MSCVASEEEE PRMC+ VVG+E HGGEYAAVFDPLDGSANIEAGLPCGTIFGILR SGSAREGR AGPST+VL GRRLVAAGYCLYGPSTKLVFTLG+GVFEFTL + G + RGG GLGGG L+FVL+RSN+RIP SG +YSVNEANS SW EAIQD+F D KT
Sbjct: 1304 GLLIGPAVWAAFKEEQKGVTRTLLGFDDDNASGKEADGKAAPPPERAGEESGVEN---ETMEEELRRWRRQQEEQLRQRPVPRMTLGTFMAETRSRSPDMEAMVPIMKSVGKTCTAVSRLVRRAQIEGMAGLHQDDGGXXXXXXXXXXESVNVQGEVQKELDVLSNSIFLTGFCQPGGMSCVASEEEETPRMCAAVVGDEMHGGEYAAVFDPLDGSANIEAGLPCGTIFGILRASGSAREGRKAGPSTVVLPGRRLVAAGYCLYGPSTKLVFTLGAGVFEFTLRGE---------GAQGRGGEGGLGGGELDFVLTRSNLRIPRSGNVYSVNEANSVSWSEAIQDYFQDLKT 1643
BLAST of mRNA_H-paniculata_contig15964.3459.1 vs. uniprot
Match: A0A836CLE5_9STRA (Fructose-bisphosphatase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CLE5_9STRA) HSP 1 Score: 243 bits (621), Expect = 3.740e-74 Identity = 138/266 (51.88%), Postives = 166/266 (62.41%), Query Frame = 1
Query: 244 TLGRFMIQSCVGSPETEAMLPIMKAVGKTCTAVSGLVRRAQVEGMAGLHQEGTNGDYAAGSMNVQGEVQKELDVLSNRIFLTGLCQPHDMSCVASEEEEYPRMCSKVVGEETHGGEYAAVFDPLDGSANIEAGLPCGTIFGILRTSGSAREGRTAGPSTIVLSGRRLVAAGYCLYGPSTKLVFTLGSGVFEFTLDEDVWGGSGANAGTERRGGGLGGGTLEFVLSRSNMRIPSSGKLYSVNEANSPSWPEAIQDFFLDFKTSGGSS 1041
T R++ PE M IM AV C +S LV+RAQ + +AG++ G +G +N+QGE QK+LDV+SNRI + LC P +SCVASEEEEYP+MCS VVG GEYAAVFDPLDGSANI AGLPCGTIFGIL+ G GP T++ SG+RL+AAGYCLYG T LV TLG+GV +FTLD +RG EFVL++ NMRIP G LYS NEANS +W IQD+ D KT G S
Sbjct: 60 TFARWLEVETWRRPEISDMSSIMMAVESACKTLSALVKRAQTDDLAGMYHGGDSG-----GVNIQGEAQKKLDVVSNRIMVAQLCSPGGLSCVASEEEEYPQMCSTVVGHSAFTGEYAAVFDPLDGSANIGAGLPCGTIFGILKRP----PGGKVGPRTVMQSGKRLLAAGYCLYGGQTNLVLTLGNGVQQFTLDP-------------KRG--------EFVLTQPNMRIPIRGSLYSANEANSHAWDGRIQDYVNDLKTGRGPS 295
BLAST of mRNA_H-paniculata_contig15964.3459.1 vs. uniprot
Match: A0A7S0XES5_9STRA (Fructose-bisphosphatase (Fragment) n=1 Tax=Chromulina nebulosa TaxID=96789 RepID=A0A7S0XES5_9STRA) HSP 1 Score: 192 bits (488), Expect = 2.610e-54 Identity = 115/281 (40.93%), Postives = 160/281 (56.94%), Query Frame = 1
Query: 187 VTTDRSAAEAATGRPRERVTLGRFMIQSCVGSPETEAMLPIMKAVGKTCTAVSGLVRRAQVEGMAGLHQEGTNGDYAAGSMNVQGEVQKELDVLSNRIFLTGLCQPHDMSCVASEEEEYPRMCSKVVGEETHGGEYAAVFDPLDGSANIEAGLPCGTIFGILRTSGSAREGRTAGPSTIVLS-GRRLVAAGYCLYGPSTKLVFTLGSGVFEFTLDEDVWGGSGANAGTERRGGGLGGGTLEFVLSRSNMRIPSSGKLYSVNEANSPSWPEAIQDFFLDFKT 1026
V D S+ + T ER T RFM SPE EA+ PI+ ++ + C ++ L+RR + + GL+ + T +N+QGE QK+LDV++NRI T LC +M VASEEE+ P +CS ++ G++AAVFDPLDGS+NI++GLP GTIFG+ + + PST+V G +LV AGYCLY ST LV T+ SG+ FTLD DV G EF L++SN+RIP+ G +YS N+A SW A + F D ++
Sbjct: 50 VNKDSSSIPSTTSN--ERKTFKRFMQVELWRSPELEALFPILDSLERACRDINRLMRRISTDNLDGLNSQFT--------VNIQGESQKKLDVIANRILKTALCCSGEMELVASEEEDEPCLCSSIIDNSAFTGDFAAVFDPLDGSSNIDSGLPTGTIFGVYKKPSFVNQ-NNFDPSTLVKQKGSKLVIAGYCLYSASTHLVITMRSGLHMFTLD-DVSG--------------------EFYLTKSNIRIPTHGNIYSFNDAYFDSWDSATRYFIQDLRS 298
BLAST of mRNA_H-paniculata_contig15964.3459.1 vs. uniprot
Match: A0A4D9D427_9STRA (Fructose-bisphosphatase n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D427_9STRA) HSP 1 Score: 182 bits (463), Expect = 5.150e-51 Identity = 113/262 (43.13%), Postives = 141/262 (53.82%), Query Frame = 1
Query: 244 TLGRFMIQSCVGSPETEAMLPIMKAVGKTCTAVSGLVRRAQVEGMAGLHQEGTNGDYAAGSMNVQGEVQKELDVLSNRIFLTGLCQPHDMSCVASEEEEYPRMCSKVVGEETHGGEYAAVFDPLDGSANIEAGLPCGTIFGILRTSG-SAREGRTAGP-STIVLSGRRLVAAGYCLYGPSTKLVFTLGSGVFEFTLDEDVWGGSGANAGTERRGGGLGGGTLEFVLSRSNMRIPSSGKLYSVNEANSPSWPEAIQDFFLDFK 1023
TL R++ E + P+M + C ++ LVRRAQ + +AGLH G G NVQGEVQK +DVL+N I +C P M VASEEEE P CS V+ GEYA VFDPLDGS+NIEAGLP GTIFGI R + R P I+ G +L+A+GYCLYG T LV TLG GV FTL + GG +FVL+ +MRIP G+LY++NE S W I ++ K
Sbjct: 23 TLSRYVEVETWKRRELTDLQPVMSGIESACRGIATLVRRAQCDEIAGLHGSG-------GDTNVQGEVQKVMDVLANNILAASMCAPGKMDYVASEEEEEPTYCSVVLQNAAFRGEYAGVFDPLDGSSNIEAGLPVGTIFGIYRRPELNMSPNRARDPLEAIMQPGSKLLASGYCLYGGQTILVLTLGQGVHGFTL--------------AKPGG-------DFVLTHPDMRIPDRGRLYAINEGPSLQWDPRIAEYVRRLK 256
BLAST of mRNA_H-paniculata_contig15964.3459.1 vs. uniprot
Match: A0A7S1XK87_9STRA (Fructose-bisphosphatase n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XK87_9STRA) HSP 1 Score: 172 bits (436), Expect = 3.730e-46 Identity = 104/271 (38.38%), Postives = 147/271 (54.24%), Query Frame = 1
Query: 229 PRERVTLGRFMIQSCVGSPETEAMLPIMKAVGKTCTAVSGLVRRAQVEGMAGLHQEGTNGDYAAGSMNVQGEVQKELDVLSNRIFLTGLCQPHDMSCVASEEEEYPRMCSKVVGEET--HGGEYAAVFDPLDGSANIEAGLPCGTIFGILRTSGSAREGRTAGPSTIVLSGRRLVAAGYCLYGPSTKLVFTLGSGVFEFTLDEDVWGGSGANAGTERRGGGLGGGTLEFVLSRSNMRIPSSGKLYSVNEANSPSWPEAIQDFFLDFKTSGG 1035
P+ T RF+ + P E + P + ++ K C ++S LVR A + G+ +E ++NVQGE K+LDV++NR+ +C +SCVASEEE+ P++C+ V+ E G+YA VFDPLDGSANI+ GL GTIFG+ + A+ G + ++ G +L+AAGYCLYG ST LV T G GV F+LDE V G +F+L N+++P SG +S NE N W +QDF KT G
Sbjct: 103 PKTTKTFARFLEIEALLEPRVEPLRPTLLSLAKACKSISELVRNAAGYDLDGMFEESAG----QATVNVQGEDVKKLDVVTNRMLKATVCAGGGVSCVASEEEDEPQLCAFVMDNENAAFSGDYAVVFDPLDGSANIDQGLSAGTIFGVYQVPEHAKRGDWK--AALLQPGSQLLAAGYCLYGSSTTLVLTTGRGVNAFSLDE-VSG--------------------DFILRHENIKMPRSGAYFSFNEGNYADWHAPVQDFVDGLKTGEG 346
BLAST of mRNA_H-paniculata_contig15964.3459.1 vs. uniprot
Match: A0A1Z5JA74_FISSO (Fructose-bisphosphatase n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JA74_FISSO) HSP 1 Score: 171 bits (432), Expect = 6.750e-46 Identity = 104/264 (39.39%), Postives = 146/264 (55.30%), Query Frame = 1
Query: 244 TLGRFMIQSCVGSPETEAMLPIMKAVGKTCTAVSGLVRRAQVEGMAGLHQEGTNGDYAAGSM--NVQGEVQKELDVLSNRIFLTGLCQPH-DMSCVASEEEEYPRMCSKVVGEETHG-GEYAAVFDPLDGSANIEAGLPCGTIFGILRTSGSAREGRTAGPSTIVLSGRRLVAAGYCLYGPSTKLVFTLGSGVFEFTLDEDVWGGSGANAGTERRGGGLGGGTLEFVLSRSNMRIPSSGKLYSVNEANSPSWPEAIQDFFLDFK 1023
T R++ C PE + P+++AV + C ++ +V+RAQ + + G+ D A + NVQGEVQ++LDVL N I + C ++ VASEE++ PR C+ V+ + G GEY AVFDP+DGS NI+A LP G+IFGI RT + G+ + + G LVAAGYCLY +T LV TLGSGV FTLD DV F+ + ++RIPS+G +YS NEAN + E +Q + K
Sbjct: 66 TFPRYLEIECWKRPELRGLEPVLQAVAEACKQINRIVQRAQTDDVYGVAV-----DVAGNPLEENVQGEVQQKLDVLCNTIMMQAFCGSSCNIHSVASEEDDEPRCCADVMNDSVFGQGEYIAVFDPIDGSKNIDASLPVGSIFGIYRT----QPGKPVNADSFLQDGNSLVAAGYCLYSATTILVLTLGSGVDGFTLDPDV---------------------SRFLHTHQDIRIPSNGAIYSFNEANYNDFDEPVQKYLSALK 299
BLAST of mRNA_H-paniculata_contig15964.3459.1 vs. uniprot
Match: A0A7S2V7Q3_9STRA (Fructose-bisphosphatase n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V7Q3_9STRA) HSP 1 Score: 170 bits (430), Expect = 7.450e-46 Identity = 108/276 (39.13%), Postives = 145/276 (52.54%), Query Frame = 1
Query: 241 VTLGRFMIQSCVGSPETEAMLPIMKAVGKTCTAVSGLVRRAQVEGMAGLHQEGTNGDYAAGSMNVQGEVQKELDVLSNRIFLTGLCQPHDMSCVASEEEEYPRMCSKVVGEETHGGEYAAVFDPLDGSANIEAGLPCGTIFGILRTSGSA---------REGRTAGPSTIVLSGRRLVAAGYCLYGPSTKLVFTLGSGVFEFTLDEDVWGGSGANAGTERRGGGLGGGTLEFVLSRSNMRIPSSGKLYSVNEANSPSWPEAIQDFFLDFKTSGGSS 1041
+TL RFMI++ +P+ + M +M ++ C +S LV RA + + G+ G GS+NVQGE QK+LDV+SN + L + +ASEEEE P V+ EE G+Y AVFDPLDGS+NI+A + GTIFGI +G E + G+ LVAAGYC+Y ST LVFT+G+G+ FTLD + EFVL+ NMR+P GK+YS NEAN W E +Q + KT G S
Sbjct: 51 MTLTRFMIENTKSNPDQQEMESMMASIQMACKKISSLVSRAGITDLTGMQAGG-------GSINVQGEEQKKLDVISNDVLKNALRCTGKLGVIASEEEESP-----VLVEEGLMGKYVAVFDPLDGSSNIDAAISTGTIFGIFEEAGECVIDYDEDNLDEEEMQCLMQTLQPGKSLVAAGYCMYSSSTILVFTMGNGLHGFTLDPQIG---------------------EFVLTHPNMRVPKRGKIYSFNEANYNDWDEPLQKYVDALKTGTGES 293
BLAST of mRNA_H-paniculata_contig15964.3459.1 vs. uniprot
Match: A0A7S3Q617_9STRA (Fructose-bisphosphatase n=2 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3Q617_9STRA) HSP 1 Score: 169 bits (428), Expect = 2.180e-45 Identity = 107/278 (38.49%), Postives = 153/278 (55.04%), Query Frame = 1
Query: 226 RPRERVTLGRFM-IQSCVGSPETEAMLPIMKAVGKTCTAVSGLVRRAQVEGMAGLHQEGTNGDYAAGSMNVQGEVQKELDVLSNRIFLTGLCQPHD--MSCVASEEEEYPRMCSKVVGEETHG-GEYAAVFDPLDGSANIEAGLPCGTIFGILRTSGSAREGRTAGPSTIVLSGRRLVAAGYCLYGPSTKLVFTLGSGVFEFTLDEDVWGGSGANAGTERRGGGLGGGTLEFVLSRSNMRIPSSGKLYSVNEANSPSWPEAIQDFFLDFKTSGGSSSG 1047
R ++ T R++ I+S P M PI++++G+ C ++ +V+RAQ + G + D N+QGEVQ++LDV+ N+I L C +S VASEEE+ PR CS V+G+ GEY AVFDP+DGS NI++ LP GTIFGI + + G+ T + G L+AAGYCLY +T LV T+GSGV FTLD D F + +MRIPS+G +YS NEAN + E ++ + LD +G +S+G
Sbjct: 60 RKKKLKTFNRYLEIESWKRGPAARDMEPILRSIGEACKQINRIVQRAQTDDFYGA---AVDSDGNTLEDNIQGEVQQKLDVVCNKIMLKQFCGSSTGIISAVASEEEDVPRCCSDVMGDPAFSEGEYVAVFDPIDGSKNIDSSLPVGTIFGIYK----CQPGKEVDEKTFLQKGNELIAAGYCLYSATTILVLTMGSGVDGFTLDPDKG---------------------NFFHTHEDMRIPSAGPIYSFNEANFHDFSEPVKRY-LDALKTGSTSTG 308
BLAST of mRNA_H-paniculata_contig15964.3459.1 vs. uniprot
Match: B5YM90_THAPS (Fructose-bisphosphatase n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B5YM90_THAPS) HSP 1 Score: 170 bits (431), Expect = 2.560e-45 Identity = 110/289 (38.06%), Postives = 151/289 (52.25%), Query Frame = 1
Query: 202 SAAEAATGRPRERVTLGRFMIQSCVGSPETEAMLPIMKAVGKTCTAVSGLVRRAQVEGMAGLHQEGTNGDYAAGSMNVQGEVQKELDVLSNRIFLTGLC-QPHDMSC-VASEEEEYPRMCSKVVGEET---------HGGEYAAVFDPLDGSANIEAGLPCGTIFGILRTSGSAREGRTAGP-STIVLSGRRLVAAGYCLYGPSTKLVFTLGSGVFEFTLDEDVWGGSGANAGTERRGGGLGGGTLEFVLSRSNMRIPSSGKLYSVNEANSPSWPEAIQDFFLDFKTSG 1032
S + +A + ++ TL RF+ C P + + V C ++ +V+RAQ + + G + G A NVQGEVQ++LDVL N + L C +++ C VASEEE PR C+ V+G +T GEY AVFDP+DGS NI++ LP GT+FGI R+ + G+ + + G ++VAAGYCLY +T LV TLGSGV FTLD D F+ + NMRIP SG LYS NEANS + E +Q F K +G
Sbjct: 68 SPSPSAKMKKKDLRTLQRFLEVECWKLPSLRNLDRTLLGVSDACKQINRIVQRAQTDDLYGAAVDPLTGLQA--DTNVQGEVQQQLDVLCNTLMLRAFCGASNNVICAVASEEEPLPRSCADVMGYDTSSSDGYNIYQSGEYVAVFDPIDGSKNIDSSLPVGTVFGIYRSPEGVKVGKDGWSLDSFLQRGTKMVAAGYCLYSATTVLVLTLGSGVHGFTLDPDK---------------------QTFLQTHPNMRIPDSGSLYSFNEANSREFSEPVQKFLEKMKEAG 333 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig15964.3459.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig15964.3459.1 >prot_H-paniculata_contig15964.3459.1 ID=prot_H-paniculata_contig15964.3459.1|Name=mRNA_H-paniculata_contig15964.3459.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=351bp RRKSGFVIRPQVWKSFKEEQKEVTGALLENAGEKISGSAIKLIEASGSAIback to top mRNA from alignment at H-paniculata_contig15964:509..4512+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig15964.3459.1 ID=mRNA_H-paniculata_contig15964.3459.1|Name=mRNA_H-paniculata_contig15964.3459.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=4004bp|location=Sequence derived from alignment at H-paniculata_contig15964:509..4512+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig15964:509..4512+ >mRNA_H-paniculata_contig15964.3459.1 ID=mRNA_H-paniculata_contig15964.3459.1|Name=mRNA_H-paniculata_contig15964.3459.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=2106bp|location=Sequence derived from alignment at H-paniculata_contig15964:509..4512+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |