prot_H-paniculata_contig1596.3456.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig1596.3456.1
Unique Nameprot_H-paniculata_contig1596.3456.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length70
Homology
BLAST of mRNA_H-paniculata_contig1596.3456.1 vs. uniprot
Match: D8LRT4_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LRT4_ECTSI)

HSP 1 Score: 131 bits (330), Expect = 7.840e-39
Identity = 65/69 (94.20%), Postives = 67/69 (97.10%), Query Frame = 0
Query:    1 MSDVNELLIAPLQKFSKDSMHLIKKCTKPDRKEFMQVAKATTVGFLVMGFIGFFVKLIHIPINNIIMGG 69
            MSDVNELLI PLQKFSKDSMHLIKKCTKPDRKEFMQVAKATTVGFLVMGFIGFFVKL+HIPINNI+M G
Sbjct:    1 MSDVNELLIQPLQKFSKDSMHLIKKCTKPDRKEFMQVAKATTVGFLVMGFIGFFVKLVHIPINNILMAG 69          
BLAST of mRNA_H-paniculata_contig1596.3456.1 vs. uniprot
Match: A0A835YV57_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YV57_9STRA)

HSP 1 Score: 123 bits (308), Expect = 1.790e-35
Identity = 62/69 (89.86%), Postives = 65/69 (94.20%), Query Frame = 0
Query:    1 MSDVNELLIAPLQKFSKDSMHLIKKCTKPDRKEFMQVAKATTVGFLVMGFIGFFVKLIHIPINNIIMGG 69
            MSDVNELLI PLQ+F KDS+ L+KKCTKPDRKEFM VAKATTVGFLVMGFIGFFVKLIHIPINNIIMGG
Sbjct:    1 MSDVNELLIIPLQQFFKDSVQLVKKCTKPDRKEFMIVAKATTVGFLVMGFIGFFVKLIHIPINNIIMGG 69          
BLAST of mRNA_H-paniculata_contig1596.3456.1 vs. uniprot
Match: W7U037_9STRA (Transport protein sec61 subunit gamma n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7U037_9STRA)

HSP 1 Score: 113 bits (282), Expect = 3.270e-31
Identity = 53/69 (76.81%), Postives = 63/69 (91.30%), Query Frame = 0
Query:    1 MSDVNELLIAPLQKFSKDSMHLIKKCTKPDRKEFMQVAKATTVGFLVMGFIGFFVKLIHIPINNIIMGG 69
            MSDVN  +I PL+KF+KDS HL+KKCTKPDRKEF ++A AT+VGFL+MGFIGFFVKLIHIPINNI++GG
Sbjct:   24 MSDVNAHIIQPLKKFAKDSSHLVKKCTKPDRKEFARIAYATSVGFLIMGFIGFFVKLIHIPINNILLGG 92          
BLAST of mRNA_H-paniculata_contig1596.3456.1 vs. uniprot
Match: K3X8N9_GLOUD (Uncharacterized protein n=6 Tax=Oomycota TaxID=4762 RepID=K3X8N9_GLOUD)

HSP 1 Score: 110 bits (276), Expect = 1.480e-30
Identity = 52/69 (75.36%), Postives = 63/69 (91.30%), Query Frame = 0
Query:    1 MSDVNELLIAPLQKFSKDSMHLIKKCTKPDRKEFMQVAKATTVGFLVMGFIGFFVKLIHIPINNIIMGG 69
            MSDVN L+  PLQ+F K+S+HLIKKCTKPDRKEF ++A AT+VGFL+MGFIGFFVKL+HIPINNI++GG
Sbjct:    1 MSDVNTLVFQPLQQFFKNSVHLIKKCTKPDRKEFTRIAAATSVGFLMMGFIGFFVKLVHIPINNILVGG 69          
BLAST of mRNA_H-paniculata_contig1596.3456.1 vs. uniprot
Match: W4FU52_9STRA (Protein transporter Sec61 subunit gamma n=8 Tax=Oomycota TaxID=4762 RepID=W4FU52_9STRA)

HSP 1 Score: 110 bits (274), Expect = 3.000e-30
Identity = 51/69 (73.91%), Postives = 64/69 (92.75%), Query Frame = 0
Query:    1 MSDVNELLIAPLQKFSKDSMHLIKKCTKPDRKEFMQVAKATTVGFLVMGFIGFFVKLIHIPINNIIMGG 69
            MSDVN L+I PL++F+K+S+HL+KKCTKPDRKEF ++A AT VGFL+MGFIGFFVKL+HIPINNI++GG
Sbjct:    1 MSDVNALVIEPLKQFAKNSVHLVKKCTKPDRKEFARIAGATGVGFLLMGFIGFFVKLVHIPINNILVGG 69          
BLAST of mRNA_H-paniculata_contig1596.3456.1 vs. uniprot
Match: A0A067CAZ0_SAPPC (Translocase SEC61 complex gamma subunit n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067CAZ0_SAPPC)

HSP 1 Score: 109 bits (272), Expect = 5.880e-30
Identity = 49/69 (71.01%), Postives = 64/69 (92.75%), Query Frame = 0
Query:    1 MSDVNELLIAPLQKFSKDSMHLIKKCTKPDRKEFMQVAKATTVGFLVMGFIGFFVKLIHIPINNIIMGG 69
            MSDVN ++I PL+ F+K+S+HL+KKCTKPDRKEF ++A AT++GFL+MGFIGFFVKL+HIPINNI++GG
Sbjct:    1 MSDVNAIVIEPLKAFAKNSIHLVKKCTKPDRKEFTRIAGATSIGFLMMGFIGFFVKLVHIPINNILVGG 69          
BLAST of mRNA_H-paniculata_contig1596.3456.1 vs. uniprot
Match: A0A1Z5K738_FISSO (Protein transport protein SEC61 subunit gamma and related proteins n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5K738_FISSO)

HSP 1 Score: 108 bits (269), Expect = 1.740e-29
Identity = 47/64 (73.44%), Postives = 62/64 (96.88%), Query Frame = 0
Query:    6 ELLIAPLQKFSKDSMHLIKKCTKPDRKEFMQVAKATTVGFLVMGFIGFFVKLIHIPINNIIMGG 69
            E+L+ PL++F+KDS+HL++KCTKPDRKEF Q+A+AT++GFL+MGFIGFFVKLIHIPINNI++GG
Sbjct:    9 EVLVEPLRQFAKDSLHLVQKCTKPDRKEFTQIARATSIGFLIMGFIGFFVKLIHIPINNILVGG 72          
BLAST of mRNA_H-paniculata_contig1596.3456.1 vs. uniprot
Match: M4BH76_HYAAE (Uncharacterized protein n=16 Tax=Peronosporaceae TaxID=4777 RepID=M4BH76_HYAAE)

HSP 1 Score: 107 bits (267), Expect = 3.410e-29
Identity = 50/69 (72.46%), Postives = 62/69 (89.86%), Query Frame = 0
Query:    1 MSDVNELLIAPLQKFSKDSMHLIKKCTKPDRKEFMQVAKATTVGFLVMGFIGFFVKLIHIPINNIIMGG 69
            MSDVN L+  PL++F K+S+HLIKKC KPDRKEF ++A AT+VGFL+MGFIGFFVKL+HIPINNI++GG
Sbjct:    1 MSDVNTLVFQPLKEFFKNSLHLIKKCNKPDRKEFARIAGATSVGFLLMGFIGFFVKLVHIPINNILVGG 69          
BLAST of mRNA_H-paniculata_contig1596.3456.1 vs. uniprot
Match: B7FQV9_PHATC (Predicted protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7FQV9_PHATC)

HSP 1 Score: 107 bits (267), Expect = 3.600e-29
Identity = 50/63 (79.37%), Postives = 59/63 (93.65%), Query Frame = 0
Query:    6 ELLIAPLQKFSKDSMHLIKKCTKPDRKEFMQVAKATTVGFLVMGFIGFFVKLIHIPINNIIMG 68
            E+LI PLQ+F+KDSMHL+KKCTKPDRKEF  +A+AT VGFL+MGFIGFFVKLIHIPINNI++G
Sbjct:   10 EVLIEPLQQFAKDSMHLVKKCTKPDRKEFTAIARATGVGFLIMGFIGFFVKLIHIPINNILVG 72          
BLAST of mRNA_H-paniculata_contig1596.3456.1 vs. uniprot
Match: B5YLP6_THAPS (Predicted protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B5YLP6_THAPS)

HSP 1 Score: 107 bits (266), Expect = 4.980e-29
Identity = 48/64 (75.00%), Postives = 60/64 (93.75%), Query Frame = 0
Query:    5 NELLIAPLQKFSKDSMHLIKKCTKPDRKEFMQVAKATTVGFLVMGFIGFFVKLIHIPINNIIMG 68
            NE+LI PL++F+KDS+HL+KKCTKPDRKEF  +AKAT +GFL+MGFIGFFVKL+HIPINNI++G
Sbjct:    8 NEVLIQPLRQFAKDSIHLVKKCTKPDRKEFTAIAKATGIGFLIMGFIGFFVKLVHIPINNILVG 71          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig1596.3456.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LRT4_ECTSI7.840e-3994.20Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835YV57_9STRA1.790e-3589.86Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
W7U037_9STRA3.270e-3176.81Transport protein sec61 subunit gamma n=2 Tax=Mono... [more]
K3X8N9_GLOUD1.480e-3075.36Uncharacterized protein n=6 Tax=Oomycota TaxID=476... [more]
W4FU52_9STRA3.000e-3073.91Protein transporter Sec61 subunit gamma n=8 Tax=Oo... [more]
A0A067CAZ0_SAPPC5.880e-3071.01Translocase SEC61 complex gamma subunit n=2 Tax=Sa... [more]
A0A1Z5K738_FISSO1.740e-2973.44Protein transport protein SEC61 subunit gamma and ... [more]
M4BH76_HYAAE3.410e-2972.46Uncharacterized protein n=16 Tax=Peronosporaceae T... [more]
B7FQV9_PHATC3.600e-2979.37Predicted protein n=2 Tax=Phaeodactylum tricornutu... [more]
B5YLP6_THAPS4.980e-2975.00Predicted protein n=1 Tax=Thalassiosira pseudonana... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008158Protein translocase SEC61 complex, gamma subunitTIGRFAMTIGR00327TIGR00327coord: 10..66
e-value: 4.4E-18
score: 62.8
IPR001901Protein translocase complex, SecE/Sec61-gamma subunitPFAMPF00584SecEcoord: 14..66
e-value: 3.7E-15
score: 55.6
IPR001901Protein translocase complex, SecE/Sec61-gamma subunitHAMAPMF_00422SecEcoord: 10..65
score: 12.4
IPR023391Protein translocase SecE domain superfamilyGENE3D1.20.5.820coord: 8..69
e-value: 2.7E-33
score: 115.3
IPR023391Protein translocase SecE domain superfamilySUPERFAMILY103456Preprotein translocase SecE subunitcoord: 10..66
NoneNo IPR availablePANTHERPTHR12309:SF5PROTEIN TRANSPORT PROTEIN SEC61 SUBUNIT GAMMAcoord: 1..68
NoneNo IPR availablePANTHERPTHR12309SEC61 GAMMA SUBUNITcoord: 1..68
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 37..58
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..36
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 59..69
NoneNo IPR availableTMHMMTMhelixcoord: 40..62

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig1596contigH-paniculata_contig1596:2750..5877 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig1596.3456.1mRNA_H-paniculata_contig1596.3456.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig1596 1961..5907 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig1596.3456.1 ID=prot_H-paniculata_contig1596.3456.1|Name=mRNA_H-paniculata_contig1596.3456.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=70bp
MSDVNELLIAPLQKFSKDSMHLIKKCTKPDRKEFMQVAKATTVGFLVMGF
IGFFVKLIHIPINNIIMGG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR008158Translocase_Sec61-g
IPR001901Translocase_SecE/Sec61-g
IPR023391Prot_translocase_SecE_dom_sf