mRNA_H-paniculata_contig15947.3448.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig15947.3448.1 vs. uniprot
Match: D7G467_ECTSI (Mitochondrial helicase twinkle n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G467_ECTSI) HSP 1 Score: 855 bits (2208), Expect = 2.910e-307 Identity = 422/593 (71.16%), Postives = 478/593 (80.61%), Query Frame = 1
Query: 1 MAFRLSGAEVVVKQCPFCHDTKNKADNMWKLSIGLKRGGAWICHRCGASGSWYDLKRRTGNGTAAQTS--AMPTALQTVRDICES--SHGG----SNDLSSATLVVPDQQRVRTYPVNLMSNQRFAHVREYLSGNRPGQRGLQIRVLIKYGVGCALYRFPAEEGYEDAECITFPWVVNKNDLKSEEVADLDAFMKTKYGNTSSAPDGVVVRVKARAVNNKRRQRLDPAGGRWGIFGLHTVPDDATAVVVTEGEFDAMAVYQATGVPAVSLPNGASSLPLGVLPLLERFEKIYLWMDDDAPGQAGVEKFVKKLGVRRCLVVRPKADDPKPPKDANEALMAGRNLQEFLDGARIRPHDDIVTFQDLRHDVLHEFQNPQEYVGTALRSFPRLTRIVKGLRGGELTVITGPTGSGKTTILSQLSLDLAEGGVNTLWGSFEVKNTRLMHKMLQQFAGKPAADLRRHPEALSAWADRFQSLPLKFMRFHGGTDVDDVLDAMDYTVYAYDVQHIILDNLQFMLTTGA-DGSGRRSGGSFDKFDAQDVALDKFRKFATERNVHIALVIHPRKEDEGHKLTTSSIFGSAKATQEADLVIILQ 1752
M FR++G EVVVK+CPFCHDT KADNMWKL IGL GGAW+CHRC ASGSWYDLKRR G+G A S AMP + + R+ +HG + ++ +PD+QR R+YP NL+ N RF V +YLSG PGQRG++ VL+KYGVGCA+Y++P E GY +A+ ITFPW+VNK D+ EEV L+ F+K KYG S PD V VRVKARAV NK+ QRLDPAGGRWGIFGLHTVPD AT VV+TEGE+DAMAVYQATG PAVSLPNGASSLPL VLPLLERF KIYLWMD D GQAGV+KFV KLG RRCLVVRP DDP PPKDANEAL+AGRNLQ+FLDGA HDDI TFQDLR V+HE QNP EY GT L+SFPR TRI+KGLR GELTV+TGPTGSGKTTILSQLSLDLA GG++TLWGSFE+KNTRLM KML QFAG+P ADL P++L A ADRFQ+LPL F+RFHGGT+VD+V+DAMDY VYA DVQHIILDNLQFMLT + +G G + G FDKFDAQD+ALDKFRKFATE NVHI LVIHPRKEDEG+KLTTSSIFGSAKATQEADLV+ILQ
Sbjct: 1 MEFRVAGGEVVVKECPFCHDTGGKADNMWKLYIGLNNGGAWMCHRCAASGSWYDLKRRAGSGGARFVSQVAMPRSSTSTRNTPNPRRTHGEEFHVTQQRAAGLRPIPDEQRARSYPTNLLHNPRFDQVMDYLSGTEPGQRGIKKEVLVKYGVGCAVYKYPGEAGYVEAQSITFPWIVNKKDIPPEEVKGLEKFVKDKYGEKSRIPDAVTVRVKARAVRNKQWQRLDPAGGRWGIFGLHTVPDGATEVVLTEGEYDAMAVYQATGKPAVSLPNGASSLPLEVLPLLERFNKIYLWMDHDGAGQAGVDKFVLKLGTRRCLVVRPLEDDPNPPKDANEALLAGRNLQDFLDGASSTKHDDIQTFQDLRQKVIHELQNPLEYSGTGLQSFPRFTRIIKGLRRGELTVLTGPTGSGKTTILSQLSLDLAAGGLSTLWGSFEIKNTRLMQKMLHQFAGRPVADLAGSPDSLRAVADRFQALPLSFLRFHGGTNVDEVIDAMDYAVYANDVQHIILDNLQFMLTRNSREGHGGKRPGPFDKFDAQDLALDKFRKFATEHNVHITLVIHPRKEDEGYKLTTSSIFGSAKATQEADLVVILQ 593
BLAST of mRNA_H-paniculata_contig15947.3448.1 vs. uniprot
Match: A0A835ZLV9_9STRA (Mitochondrial helicase twinkle n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZLV9_9STRA) HSP 1 Score: 699 bits (1805), Expect = 1.530e-245 Identity = 350/585 (59.83%), Postives = 425/585 (72.65%), Query Frame = 1
Query: 1 MAFRLSGAEVVVKQCPFCHDTKNKADNMWKLSIGLKRGGAWICHRCGASGSWYDLKRRTGNGTAAQTSAMPTALQTVRDICESSHGGSNDLSSATLVVPDQQRVRTYPVNLMSNQRFAHVREYLSGNRPGQRGLQIRVLIKYGVGCALYRFPAEEGYEDAECITFPWVVNKNDLKSEEVADLDAFMKTKYGNTSSAPDGVVVRVKARAVNNKRRQRLDPAGGRWGIFGLHTVPDDATAVVVTEGEFDAMAVYQATGVPAVSLPNGASSLPLGVLPLLERFEKIYLWMDDDAPGQAGVEKFVKKLGVRRCLVVRPKADDPKPPKDANEALMAGRNLQEFLDGARIRPHDDIVTFQDLRHDVLHEFQNPQEYVGTALRSFPRLTRIVKGLRGGELTVITGPTGSGKTTILSQLSLDLAEGGVNTLWGSFEVKNTRLMHKMLQQFAGKPAADLRRHPEALSAWADRFQSLPLKFMRFHGGTDVDDVLDAMDYTVYAYDVQHIILDNLQFMLTTGADGSGRRSGGSFDKFDAQDVALDKFRKFATERNVHIALVIHPRKED-EGHKLTTSSIFGSAKATQEADLVIILQ 1752
+ +R++G++V VK+CPFCHDT+ + DNMWKL G + GGA+ CHRCG++GSWYD KRR G T AL+ R S+ G +D + P+Q+ R Y LMS+ A VRE+L+G PGQRG+ VL+KYGVG A+Y FP E GY +A+C+TFPW + ++ +EE +L A + G D V+ R+K RAV+NK QRLDPAGGRWG+FG HTVP DAT VV+TEGEFDA+AVYQATGVPAVSLPNG SLP+ VLP+LERF IYLWMD+DAPGQ G KF +KLG RR +VRP ADD P KDANEAL+AG++L L AR D+I+ F DLR VLHE NP E+VGT L SFPRLT IVKG R GEL+V TG TG+GKTT+LSQ+SLDLA GV+TLWGSFEV+NTRL+ KMLQQF G+P L ALSA DRF++LPL FM FHGGTDVD+VL+AM+Y VY DV HIILDNLQFML+ A + R +DKFDAQD+A++KFRKFATERNVHI LVIHPRKED E +L+ +S+FGSAK TQEADLV+ILQ
Sbjct: 45 LEYRVAGSQVNVKRCPFCHDTRGQIDNMWKLYFGAESGGAYFCHRCGSNGSWYDFKRRVGG--VEMTGLDAAALE--RSSSGSTRAGEHDTPGKPM--PNQRLARAYAGQLMSHPGKARVREFLTGKAPGQRGIDRAVLLKYGVGSAVYSFPTEHGYREADCVTFPWHALRTEMSTEEFTELLAGTEADSGAGGQPVDSVITRLKVRAVDNKAWQRLDPAGGRWGLFGWHTVPPDATEVVLTEGEFDALAVYQATGVPAVSLPNGCRSLPVDVLPMLERFTTIYLWMDNDAPGQEGAAKFARKLGERRVRIVRPPADDAAPAKDANEALLAGKDLAALLAAARPLQRDEILHFSDLRESVLHEIMNPMEFVGTPLESFPRLTEIVKGFRQGELSVFTGGTGAGKTTVLSQISLDLARRGVSTLWGSFEVRNTRLVKKMLQQFGGRPPEALAGDAPALSALMDRFEALPLCFMGFHGGTDVDEVLEAMEYAVYVNDVSHIILDNLQFMLSRSATSAKRGGMAQWDKFDAQDIAMEKFRKFATERNVHITLVIHPRKEDDEKQRLSLTSVFGSAKMTQEADLVLILQ 623
BLAST of mRNA_H-paniculata_contig15947.3448.1 vs. uniprot
Match: A0A8K1FKX8_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FKX8_PYTOL) HSP 1 Score: 580 bits (1494), Expect = 1.180e-196 Identity = 312/583 (53.52%), Postives = 391/583 (67.07%), Query Frame = 1
Query: 31 VVKQCPFCHDTKNKADNMWKLSIGLKRGGAWICHRCGASGSWYDLKRRT-GNGTAAQTSAMPTALQTVRDICESSHGGSNDLSSATLV-VPDQQRVRTYPVNLMSNQRFAHVREYLSGNRPGQRGLQIRVLIKYGVGCALYRFPAEEGYED-AECITFPWVVNKNDLKSEEVADLDAFMKTKYGNTSSAPDGV------VVRVKARAVNNKRRQRLDPAGGRWGIFGLHTVPDDATAVVVTEGEFDAMAVYQATGVPAVSLPNGASSLPLGVLPLLERFEKIYLWMDDDAPGQAGVEKFVKKLGVRRCLVVRPKADDPKPPKDANEALMAGRNLQEFLDGARIRPHDDIVTFQDLRHDVLHEFQNPQEYVGTALRSFPRLTRIVKGLRGGELTVITGPTGSGKTTILSQLSLDLAEGGVNTLWGSFEVKNTRLMHKMLQQFAGKPAADLRRHPEALSAWADRFQSLPLKFMRFHGGTDVDDVLDAMDYTVYAYDVQHIILDNLQFMLTTGADGSGRRSGGSFDKFDAQDVALDKFRKFATERNVHIALVIHPRKEDEGHKLTTSSIFGSAKATQEADLVIILQ 1752
VVK+CPFCH T+ K DN++KL I K G + CHRCGA+GSW+D K++ GN + M + G S D A ++ V D Q+ NL + F +R+YL +RG+ +VL+KYGVG F E G + A+CI+FPW+ + DL + V +SS+P V+R+K RA+ +K +QRL P GG WG+FG +TVP A +VVTEGEFDAMAVYQATG+PAVSLPNG SLP VLPLLERF+KIYLWMD+DAPGQA VEKF KLG+ RC +VRP AD KP KDAN+AL+AG +L++ + A I PHD I TF+ LR DV E NP G R+ P L R++KG R GE+T++TGPTG GKTT+LSQLSLDL GVNTLWGSFE+KNTRL+HKML Q AGK +LR A A AD+F++LP+ F+RF G TDVD+VLDAM+Y VYAYDVQHI+LDN+QFM+ G GR +DKF+ QD ALDKFRKFA+++NVH+ LVIHPRKE E LT +S+FG+AKATQEAD V+ILQ
Sbjct: 42 VVKECPFCHPTRGKVDNLFKLYIH-KSKGVYKCHRCGAAGSWFDFKQKLQGNVSVGSVGGMLHG--------DGGPGASLDPREAKVISVLDNQKAMAIQRNLFDDPDFEPIRQYLIE----KRGISEQVLMKYGVGAIEQPFRNENGEQVVAKCISFPWMARQGDLDTMGVL-----------RSSSSPSSADKNQFDVIRLKIRALEDKSQQRLVPKGGSWGLFGWNTVPTSAEEIVVTEGEFDAMAVYQATGMPAVSLPNGCQSLPPNVLPLLERFKKIYLWMDNDAPGQASVEKFATKLGITRCFIVRPPADSKKPIKDANDALLAGADLKKLIHLAEIIPHDQIATFEQLRRDVYEEIVNPIRACGVQSRTLPSLNRLLKGHRLGEVTILTGPTGCGKTTLLSQLSLDLCGQGVNTLWGSFEIKNTRLIHKMLTQLAGK---NLRGDVNAFEAVADKFEALPMYFLRFFGSTDVDEVLDAMEYAVYAYDVQHILLDNVQFMMA----GQGR----GYDKFERQDAALDKFRKFASQKNVHLTLVIHPRKEQEDVDLTLTSVFGTAKATQEADNVLILQ 589
BLAST of mRNA_H-paniculata_contig15947.3448.1 vs. uniprot
Match: A0A2D4C4T1_PYTIN (Twinkle protein putative n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4C4T1_PYTIN) HSP 1 Score: 556 bits (1432), Expect = 6.350e-189 Identity = 305/579 (52.68%), Postives = 377/579 (65.11%), Query Frame = 1
Query: 1 MAFRLSGAEVVVKQCPFCHDTKNKADNMWKLSIGLKRGGAWICHRCGASGSWYDLKRRTGNGTAAQTSAMPTALQTVRDICESSHGGSNDLSSATLVVPDQQRVRTYPVNLMSNQRFAHVREYLSGNRPGQRGLQIRVLIKYGVGCALYRFPAEEGYEDA-ECITFPWVVNKNDLKSEEVADLDAFMKTKYGNTSSAPDGVVVRVKARAVNNKRRQRLDPAGGRWGIFGLHTVPDDATAVVVTEGEFDAMAVYQATGVPAVSLPNGASSLPLGVLPLLERFEKIYLWMDDDAPGQAGVEKFVKKLGVRRCLVVRPKADDPKPPKDANEALMAGRNLQEFLDGARIRPHDDIVTFQDLRHDVLHEFQNPQEYVGTALRSFPRLTRIVKGLRGGELTVITGPTGSGKTTILSQLSLDLAEGGVNTLWGSFEVKNTRLMHKMLQQFAGKPAADLRRHPEALSAWADRFQSLPLKFMRFHGGTDVDDVLDAMDYTVYAYDVQHIILDNLQFMLTTGADGSGRRSGGSFDKFDAQDVALDKFRKFATERNVHIALVIHPRKEDEGHKLTTSSIFGSAKATQEAD 1734
+AFR S + +++K+CPFCH T+ KADN++KL + +R G + CHRCGA+GSW+D KR +G+ + + A TAL GG S AT NL + FA VR YL+ R GL VL KYGVG F + G A CI FPW+ +DL + V T + + VVR+K R V +KR+QRL P GG WG+FG +T P A +VVTEGEFDAMAV+QATG+PAVSLPNG SLP VLPLLERF+KI LW+D+DA GQA V+KF KLGV RC++VR A +P+ KDAN+AL AG +L L A I PH I TF+ LR DV E NP G RS P L ++KG R GE+TV+TGPTG GKTT+LSQLSLDL GV TLWGSFE+KNTRLMHKML Q AG+ LR +A A ADRF++LP+ F+RF G TDVD+VLDAM+Y VYAYDVQH++LDN+QFM+ G GR +DKF+ QD ALDKFR+FA+++NVH+ LVIHPRKE E LT SS+FG+AKATQEAD
Sbjct: 69 LAFRASDSHLIIKECPFCHATRGKADNLFKLYVH-RRQGVFKCHRCGAAGSWFDFKRSLQSGSVSLSPAS-TALH---------GGGGGGASPATWRRGQGHLAMAIQRNLTEDPAFAGVRAYLTQTR----GLSEHVLAKYGVGAIEQPFRNDAGERVAVPCIAFPWMARPSDLDAMGVVVASGAAPTAADDRNQFD---VVRLKLRGVADKRQQRLVPKGGSWGLFGWNTXPAAAEELVVTEGEFDAMAVHQATGLPAVSLPNGCQSLPPAVLPLLERFKKIXLWLDNDAAGQASVDKFAAKLGVARCVIVRAPAGEPRV-KDANDALRAGVDLSALLASAEILPHSQITTFEQLRRDVYEEIVNPLRACGVQSRSLPALNALLKGHRLGEVTVLTGPTGCGKTTLLSQLSLDLCAQGVTTLWGSFEIKNTRLMHKMLTQLAGR---GLRGDVDAFEAVADRFEALPMYFLRFFGSTDVDEVLDAMEYAVYAYDVQHVLLDNVQFMMA----GQGR----GYDKFERQDAALDKFRRFASQQNVHVTLVIHPRKEQEDADLTLSSVFGTAKATQEAD 617
BLAST of mRNA_H-paniculata_contig15947.3448.1 vs. uniprot
Match: A0A5D6XVL9_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XVL9_9STRA) HSP 1 Score: 558 bits (1437), Expect = 1.120e-187 Identity = 300/592 (50.68%), Postives = 386/592 (65.20%), Query Frame = 1
Query: 10 RLSGAEVVVKQCPFCHDTKNKADNMWKLSIGLKRGGAWICHRCGASGSWYDLKRRTGNGTAAQTSAMPTALQTVRDICESSHGGSNDLSSAT----LVVPDQQRVRTYPVNLMSNQRFAHVREYLSGNRPGQRGLQIRVLIKYGVGCALYRFPAEEGYE-DAECITFPWVVNKNDLKSEEVADLDAFMKTKYGNTSSAPDGV--VVRVKARAVNNKRRQRLDPAGGRWGIFGLHTVPDDATAVVVTEGEFDAMAVYQATGVPAVSLPNGASSLPLGVLPLLERFEKIYLWMDDDAPGQAGVEKFVKKLGVRRCLVVRPKADDP----KPPKDANEALMAGRNLQEFLDGARIRPHDDIVTFQDLRHDVLHEFQNPQEYVGTALRSFPRLTRIVKGLRGGELTVITGPTGSGKTTILSQLSLDLAEGGVNTLWGSFEVKNTRLMHKMLQQFAGKPAADLRRHPEALSAWADRFQSLPLKFMRFHGGTDVDDVLDAMDYTVYAYDVQHIILDNLQFMLTTGADGSGRRSGGSFDKFDAQDVALDKFRKFATERNVHIALVIHPRKEDEGHKLTTSSIFGSAKATQEADLVIILQ 1752
R + VV++CPFCH T +ADN++KL + K G + CHRCGASGSW+D K + + S+ L HGG N ++ A + D + NL+ F V YL+ QRG+++ VL KYGVG F E G + A+CI+FPW+ ++DL + V D G T++ + V+R+K RAV++K +QRL P GG WG+FG +TVP + +V+TEGEFDAMAV+QATG+PA+SLPNG SLP VLPLLERF K++LWMD+DA GQA VEKF K+GV RC +VRP A KP KDAN+AL+AG +L + + GA PH I TF +LR +V E NP G R+ P L R++KG R GE+TV+TGPTG GKTT+LSQLS+DL GV+TLWGSFE+KNTRL+HKML Q AG+ L +A AD+F++LP+ FMRF G TDVD+VLDAM+Y VYAYDVQHI+LDN+QFM+ G GR FDKF+ QD ALDKFRKFA+++NVH+ LVIHPRKE E LT +S+FG+AKATQEAD V+ILQ
Sbjct: 58 RETDTHFVVRECPFCHPTHGRADNLFKLYVH-KAQGVYKCHRCGASGSWFDFKSKLQSNVGV--SSADGVL----------HGGGNSIADAAAPKVIQALDNAKAMAIQKNLLEEPEFKAVLTYLTE----QRGIRLDVLQKYGVGAIEQPFRNENGDQVPAKCISFPWMARQHDLDAMGVI-CDDLASRPAGGTANGDKNLFNVIRLKIRAVDDKSKQRLVPKGGSWGLFGWNTVPTASDEIVITEGEFDAMAVHQATGLPAISLPNGCQSLPPSVLPLLERFSKVFLWMDNDASGQANVEKFASKIGVARCYIVRPSAASVTTAGKPVKDANDALLAGLDLAQIMHGAERIPHSQITTFDELRREVYEEILNPLRACGVQSRTLPSLNRLLKGHRMGEVTVLTGPTGCGKTTLLSQLSIDLCGQGVSTLWGSFEIKNTRLIHKMLNQLAGR---SLEGDIKAFEGAADKFEALPMYFMRFFGSTDVDEVLDAMEYAVYAYDVQHILLDNIQFMMA----GQGR----GFDKFERQDAALDKFRKFASQKNVHLTLVIHPRKEQEDVDLTLTSVFGTAKATQEADNVLILQ 620
BLAST of mRNA_H-paniculata_contig15947.3448.1 vs. uniprot
Match: A0A7S2WTT8_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WTT8_9STRA) HSP 1 Score: 549 bits (1414), Expect = 4.920e-187 Identity = 302/588 (51.36%), Postives = 386/588 (65.65%), Query Frame = 1
Query: 31 VVKQCP-----FCHDTKN--KADNMWKLSIGLKRGGAWICHRCGASGSWYDLKRRTGNGTAAQTSAMPTALQTVRDICESSHGGSNDLSSATLVVPDQQRVRTYPVNLMSNQRFAHVREYLSGNRPGQRGLQIRVLIKYGVGCALYRFPAEEGYEDAECITFPWVVNKNDLKSEEVADLDAFMKTKYGNTSSAP---DGVVVRVKARAVNNKRRQRLDPAGGRWGIFGLHTVPDDATAVVVTEGEFDAMAVYQATGVPAVSLPNGASSLPLGVLPLLERFEKIYLWMDDDAPGQAGVEKFVKKLGVRRCLVVRPKADDPKPPKDANEALMAGRNLQEFLDGARIRPHDDIVTFQDLRHDVLHEFQNPQEYVGTALRSFPRLTRIVKGLRGGELTVITGPTGSGKTTILSQLSLDLAEGGVNTLWGSFEVKNTRLMHKMLQQF---AGKPAAD-LRRHPEALSAWADRFQSLPLKFMRFHGGTDVDDVLDAMDYTVYAYDVQHIILDNLQFMLTTGADGSGRRSGGSFDKFDAQDVALDKFRKFATERNVHIALVIHPRKEDEGHKLTTSSIFGSAKATQEADLVIILQ 1752
VVK C C N K DN +K+ I + GAW CHRCGA GSWYDLKR A S+M A E S + L L+ D+ + + + N + +R YL QRGL + VL+KYGVGCA + F E+ Y D C TFPW++++ L ++ ADL NTS+ P + V+ RVKARA ++K QRL P G WG+FGLHTVP+DAT +V+TEGEFDAMAVYQATG+PAVSLPNGASSLP+ VLPLLE FEKIYLWMD+DA G++G EKF +KLG+ RC ++ P + P PKDANEAL+ G ++ + AR H I TF LR VLHE +P+ Y GT ++S P T+++KG R GEL++ TGPTG GKTT+L+Q+SLDLAE G LWGSFEV N RLM K+L Q AG + + AL+ ADRFQ LP+ FM FHG +D+D VLDAMD+ VY +DVQHII+DNLQFML+ R GS D+F+ QD+A+++ R+FAT+RNVH++LV+HPRKE+EG +L +S+FGSAKATQEADLV+ILQ
Sbjct: 13 VVKDCSALPVGICEKPSNTHKTDNQFKVYIS-RTTGAWYCHRCGAKGSWYDLKRVFHGYGLATASSMVNA--------EPSTAPAKVLP---LIDKDENKRYVHALLHSENDQIVAMRNYLLH----QRGLSLPVLMKYGVGCASFSFSDEDRYVDTLCFTFPWIMSRAQLLQQD-ADL---------NTSTEPAHDEFVIRRVKARAYSHKGWQRLHPKGAGWGLFGLHTVPEDATTIVITEGEFDAMAVYQATGMPAVSLPNGASSLPVQVLPLLEPFEKIYLWMDNDAAGKSGCEKFARKLGLSRCHIISP-SPGPAVPKDANEALVQGCDIAAIIGDARPPEHSQISTFVHLRERVLHEMMHPELYAGTPVKSLPEFTKVIKGFRPGELSIFTGPTGVGKTTLLAQISLDLAEHGNRMLWGSFEVSNIRLMSKLLTQCGLGAGHQVTPGSKAYQAALNQTADRFQDLPMFFMTFHGSSDLDQVLDAMDFAVYVHDVQHIIIDNLQFMLS-------RNYRGSMDRFEQQDLAVERLRRFATDRNVHVSLVVHPRKEEEGIRLHLASVFGSAKATQEADLVVILQ 566
BLAST of mRNA_H-paniculata_contig15947.3448.1 vs. uniprot
Match: B8LE42_THAPS (Predicted protein n=2 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8LE42_THAPS) HSP 1 Score: 552 bits (1423), Expect = 7.460e-187 Identity = 297/604 (49.17%), Postives = 380/604 (62.91%), Query Frame = 1
Query: 7 FRLSGAEVVVKQCPFC-HDTKNKADNMWKLSIGLKRGGAWICHRCGASGSWYDLKRRTGNGTAAQTSAMPTALQTVRDICESSHGGSNDLSSATLVVPDQQRVRTYPVNLMSNQRFAHVREYLSGNRPGQRGLQIRVLIKYGVGCALYRFPAEEG-------YEDAECITFPWVVNKNDLKSEEVADLDAFMKTKYGNTSSAPDGVVVRVKARAVNNKRRQRLDPAGGRWGIFGLHTVPDDATAVVVTEGEFDAMAVYQATGVPAVSLPNGASSLPLGVLPLLERFEKIYLWMDDDAPGQAGVEKFVKKLGVRRCLVVRP---KADDPKPPKDANEALMAGRNLQEFLDGARIRPHDDIVTFQDLRHDVLHEFQNPQEYVGTALRSFPRLTRIVKGLRGGELTVITGPTGSGKTTILSQLSLDLAEGGVNTLWGSFEVKNTRLMHKMLQQF------AGKPAADL-----RRHPEALSAWADRFQSLPLKFMRFHGGTDVDDVLDAMDYTVYAYDVQHIILDNLQFMLTTGADGSGRRSGGSFDKFDAQDVALDKFRKFATERNVHIALVIHPRKEDEGHKLTTSSIFGSAKATQEADLVIILQ 1752
FR + + V++++CPFC TK + DN +KL + + GGA+ CHRCGA GSWYD K G + Q S + S GG S++ P + N + +YL+ R GL VL KYGVGCA Y F +++G Y + C+TFP S+ + R+K R++ K QRLDP GG +G+FG HTVP +AT +++TEGEFDAMAVYQATG PAVSLPNG SLP+ VL LLE F+ +YLWMD+D PG+ G E F +KLGV RCL+V+P + P+PPKDANEAL+ G ++ E L+ A PH+ I+ F DLR V+HE NP++Y GT + S P T ++KG R GELTV+TGPTGSGKTT L Q SLDL E G+N LWGSFE+KNTRLMHK+LQQ+ G DL + AL++ AD+F+SLP+ FM+FHGG+DVDDVLDAM+Y Y +DV+HIILDN+QFM++ S G SFDKFD QD+A++KFRKFATE NVH+ LV+HPRKEDEG KL SS +GSAKATQEAD V+ILQ
Sbjct: 94 FRYTSSHVILQECPFCPKPTKGRVDNQYKLYVSVG-GGAYFCHRCGAKGSWYDFKSELGGFSVEQHS------NACANSDSSGQGGRQQASNSINSQPWNWNTK----NNNGMNYLGSILQYLTNTR----GLDRSVLRKYGVGCASYNFHSKDGSTVSGASYVSSMCVTFP--------------------------CSTHGPYIPRRIKVRSIEKKAWQRLDPPGGGFGLFGWHTVPHNATEIIITEGEFDAMAVYQATGRPAVSLPNGCRSLPMEVLLLLENFDTVYLWMDNDGPGREGAEMFARKLGVERCLLVQPSGKRGAPPEPPKDANEALLTGWDINELLEEASELPHERILKFSDLRDQVIHEIINPEKYRGTPIPSLPGFTSLIKGFRRGELTVLTGPTGSGKTTFLGQTSLDLVEQGINVLWGSFEIKNTRLMHKLLQQYMKDVLPVGLAEKDLSVEERQNAMTALTSLADKFESLPMYFMKFHGGSDVDDVLDAMEYAAYVHDVEHIILDNMQFMISRQ---SVEGKGSSFDKFDMQDIAIEKFRKFATEYNVHVTLVVHPRKEDEGAKLGMSSFYGSAKATQEADTVLILQ 653
BLAST of mRNA_H-paniculata_contig15947.3448.1 vs. uniprot
Match: A0A1Z5K003_FISSO (SF4 helicase domain-containing protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5K003_FISSO) HSP 1 Score: 546 bits (1408), Expect = 4.050e-185 Identity = 295/603 (48.92%), Postives = 390/603 (64.68%), Query Frame = 1
Query: 7 FRLSGAEVVVKQCPFC-HDTKNKADNMWKLSIGLKRGGAWICHRCGASGSWYDLKRRTGNGTAAQTSAMPTALQTVRDICESSHGGSNDLSSATLVVPDQQRVRTYPVNLMSNQRFAHVREYLSGNRPGQRGLQIRVLIKYGVGCALYRFPAEEGYEDAECITFPWVVNKNDLKSEE--------VADLDAFMKTKYGNTSSAPDGVVVRVKARAVNNKRRQRLDPAGGRWGIFGLHTVP--DDATAVVVTEGEFDAMAVYQATGVPAVSLPNGASSLPLGVLPLLERFEKIYLWMDDDAPGQAGVEKFVKKLGVRRCLVVRPKADDP------KPPKDANEALMAGRNLQEFLDGARIRPHDDIVTFQDLRHDVLHEFQNPQEYVGTALRSFPRLTRIVKGLRGGELTVITGPTGSGKTTILSQLSLDLAEGGVNTLWGSFEVKNTRLMHKMLQQFAGKPAADLRRHPEA---LSAWADRFQSLPLKFMRFHGGTDVDDVLDAMDYTVYAYDVQHIILDNLQFMLTTGADGSGRRSGGS-FDKFDAQDVALDKFRKFATERNVHIALVIHPRKEDEGHKLTTSSIFGSAKATQEADLVIILQ 1752
+R + V++++CPFC TK KA+N +KL I L GGA+ CHRCG GSW+D K +T SA T +S L +P + Y L+ +Q V YL+ R GL ++ L KYG+G A Y F + +E EC+TFPW++ +D+ +E V D ++F+ R+K RA+ NK QRLDPAGG WG FG HT+ D + +VVTEGE+DAMAV+QATG+PA+SLPNG SLP+ VLPLLE +EKIYLWMD+D PGQ G F +K+G+ RC +V+P + PKDAN+AL+ G +L+ + A+ PH+ +++F DL+ VLHE +P++Y GT L S P+ + +VKGLR GELTV+TGPTGSGKTT L Q+SLDLAE GVN LWGSFEV+NTRL+HK+LQQFA +P R P + L A RF LPL F++FHG +++++VLDAM+Y VY +D +HI+LDNLQFM++ RSG S FDKFDAQD+A++KFRKFATERNVH++LV+HPRKEDE +L SSI+GSAKATQEAD V+ILQ
Sbjct: 54 YRTTNNHVILEECPFCTKPTKGKAENTFKLYIQLG-GGAYFCHRCGQGGSWFDFKAKTSKDPQVVKSASQTIYSPKMH------------ASQPLPMPSSRLQALYNSQLL-DQPDNDVLRYLTETR----GLTVKTLRKYGIGRAKYSFNNDGAWEPVECVTFPWIMKASDVSFQEELRGVKHPVEDPNSFLTR--------------RIKVRALENKAWQRLDPAGGGWGFFGYHTLDGADKSQPIVVTEGEYDAMAVWQATGIPAISLPNGCRSLPVEVLPLLEDYEKIYLWMDNDGPGQEGARVFSQKIGLGRCFMVQPTLESTGCLEFADLPKDANDALLQGHDLKRIIMEAKPVPHEQVLSFSDLQDSVLHEILHPEKYEGTKLPSLPKFSAVVKGLRRGELTVVTGPTGSGKTTFLGQMSLDLAEQGVNVLWGSFEVRNTRLIHKLLQQFARQPLP--RGDPSSADKLKDIAKRFGELPLHFLKFHGASELEEVLDAMEYAVYVHDCEHIVLDNLQFMISR--QNLASRSGNSNFDKFDAQDIAIEKFRKFATERNVHLSLVVHPRKEDESARLGISSIYGSAKATQEADNVLILQ 620
BLAST of mRNA_H-paniculata_contig15947.3448.1 vs. uniprot
Match: A0A1E7FNP2_9STRA (p-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FNP2_9STRA) HSP 1 Score: 544 bits (1401), Expect = 2.930e-184 Identity = 293/589 (49.75%), Postives = 376/589 (63.84%), Query Frame = 1
Query: 10 RLSGAEVVVKQCPFC-HDTKNKADNMWKLSIGLKRGGAWICHRCGASGSWYDLKRRTGNGTAAQTSAMPTALQTVRDICESSHGGSNDLSSATLVVPDQQRVRTYPVNLMSNQRFAHVREYLSGNRPGQRGLQIRVLIKYGVGCALYRFPAEE--GYEDAECITFPWVVNKNDLKSEEVADLDAFMKTKYGNTSSAPDGVVV--RVKARAVNNKRRQRLDPAGGRWGIFGLHTVPDDATAVVVTEGEFDAMAVYQATGVPAVSLPNGASSLPLGVLPLLERFEKIYLWMDDDAPGQAGVEKFVKKLGVRRCLVVRPKADDPKPPKDANEALM-AGRNLQEFLDGARIRPHDDIVTFQDLRHDVLHEFQNPQEYVGTALRSFPRLTRIVKGLRGGELTVITGPTGSGKTTILSQLSLDLAEGGVNTLWGSFEVKNTRLMHKMLQQFA--GKPAADLRRHPEALSAWADRFQSLPLKFMRFHGGTDVDDVLDAMDYTVYAYDVQHIILDNLQFMLTTGADGSGRRSGGSFDKFDAQDVALDKFRKFATERNVHIALVIHPRKEDEGHKLTTSSIFGSAKATQEADLVIILQ 1752
R + VV+++CPFC T+N+A N++KL I + GGA+ CHRCG GSWYDLK + G RD + + D ++ N ++ E RGL + L KYGVG Y+FP + GY + ECITFPW++ + P G V R+KARA+ K QRLDP GG WG+FGLHT+P+DAT +V+TEGE+DAMAV QATG AVSLPNG SLP+ LPLLERF+KIYLWMD+D PG+ G EKF KKLGV R +V+ KDAN+AL+ +L + ++ A + PHD IVTF+DLR+DVL E P +Y GT + S PR T+I+KG R GE+TV+TGPTG+GKTT L Q+SLDLAE G N LWGSFE+KNTRL+HK+++QF+ P + E A ADRF++LPL FM+FHGG+D+D+VLDAM+Y VY DV+HIILDN+QFM+T +G++S SFDKF+ QD+A++KFRKFATE NVH+ LV+HPRKED KL+ SS FGSAKATQEAD VII+Q
Sbjct: 57 RTTSTHVVLRECPFCPKPTRNEASNLYKLHIQIG-GGAYFCHRCGTGGSWYDLKAKFGG------------FNVERDHPNNDDSKNIDSTNDXXXXXXXXXXXXXXXXXXKNDVLRYLTEV--------RGLNTKTLRKYGVGKGAYQFPCDVSGGYRETECITFPWIMRE------------------------IPTGAFVTRRIKARALEKKAWQRLDPPGGGWGLFGLHTIPNDATEIVLTEGEYDAMAVSQATGRHAVSLPNGCRSLPVQTLPLLERFDKIYLWMDNDEPGREGAEKFAKKLGVNRTYIVQ-----CLEAKDANDALLNKDIDLNQVIENATLTPHDRIVTFKDLRNDVLQELLEPDQYSGTPVPSLPRFTQIIKGFRRGEMTVLTGPTGAGKTTFLGQVSLDLAEQGENVLWGSFEIKNTRLLHKLMKQFSRDSLPVSTEVNAREKFEALADRFETLPLYFMKFHGGSDMDEVLDAMEYAVYVNDVEHIILDNMQFMITR----NGKKS--SFDKFEVQDLAIEKFRKFATEHNVHVTLVVHPRKEDAAAKLSISSFFGSAKATQEADTVIIIQ 589
BLAST of mRNA_H-paniculata_contig15947.3448.1 vs. uniprot
Match: K3WZ52_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WZ52_GLOUD) HSP 1 Score: 546 bits (1408), Expect = 8.570e-184 Identity = 300/590 (50.85%), Postives = 383/590 (64.92%), Query Frame = 1
Query: 10 RLSGAEVVVKQCPFCHDTKNKADNMWKLSIGLKRGGAWICHRCGASGSWYDLKRRTGNGTAAQTSAMPTALQTVRDICESSHGGSNDLSSATL--VVP--DQQRVRTYPVNLMSNQRFAHVREYLSGNRPGQRGLQIRVLIKYGVGCALYRFPAEEG-YEDAECITFPWVVNKNDLKSEEVADLDAFMKTKYGNTSSAPDGVVVRVKARAVNNKRRQRLDPAGGRWGIFGLHTVPDDATAVVVTEGEFDAMAVYQATGVPAVSLPNGASSLPLGVLPLLERFEKIYLWMDDDAPGQAGVEKFVKKLGVRRCLVVRPK----ADDPKPPKDANEALMAGRNLQEFLDGARIRPHDDIVTFQDLRHDVLHEFQNPQEYVGTALRSFPRLTRIVKGLRGGELTVITGPTGSGKTTILSQLSLDLAEGGVNTLWGSFEVKNTRLMHKMLQQFAGKPAADLRRHPEALSAWADRFQSLPLKFMRFHGGTDVDDVLDAMDYTVYAYDVQHIILDNLQFMLTTGADGSGRRSGGSFDKFDAQDVALDKFRKFATERNVHIALVIHPRKEDEGHKLTTSSIFGSAKATQEADLVIILQ 1752
R + VV+ CPFCH T KADN++KL + K G + CHRCGASGSW+D K + + A + M + GG++ ++ A L V+ D + NL+ F V YL+ R G++ VL KYGVG F + G E ++CI+FPW+ + DL + V ++ N + V+R+K RAV++K +QRL P GG WG+FG +TVP + +V+TEGEFDAMAVYQATG+PA+SLPNG SLP VLPLLERF+KIYLWMD+DA GQA VEKF K+GV RC +VRP A KP KDAN+AL+AG +L + A PH I TF +LR +V E NP G R+ P L R++KG R GE+TV+TGPTG GKTT+LSQLS+DL GV+TLWGSFE+KNTRLMHKML Q AG+ L+ A + AD+F++LP+ FMRF G TDVD+VLDAM+Y VYAYDVQHI+LDN+QFM+ G GR FDKF+ QD ALDKFRKFA+++NVH+ LVIHPRKE E LT +S+FG+AKATQEAD V+ILQ
Sbjct: 38 RETDTHFVVRDCPFCHPTHGKADNIFKLYV-QKAQGVYKCHRCGASGSWFDFKSKLQSNIAVNS--MEGVMH---------GGGASSIAEAMLPKVIQALDNAKAMAIQQNLLEEPEFQSVLRYLTETR----GIKKEVLQKYGVGAIEQPFRNDVGDLETSKCISFPWMARQQDLDAMGVICDSETPQSGDKNLFN-----VIRLKIRAVDDKAKQRLVPKGGSWGLFGWNTVPTASDEIVITEGEFDAMAVYQATGMPAISLPNGCQSLPPSVLPLLERFKKIYLWMDNDASGQANVEKFSSKIGVTRCYIVRPSPPVGAQRTKPIKDANDALLAGLDLGAIVRAAERIPHSQITTFDELRREVYEEILNPLRACGVQSRTLPSLNRLLKGHRMGEVTVLTGPTGCGKTTLLSQLSIDLCGQGVSTLWGSFEIKNTRLMHKMLNQLAGR---SLQGDINAFESAADKFEALPMYFMRFFGSTDVDEVLDAMEYAVYAYDVQHILLDNIQFMMA----GQGR----GFDKFERQDAALDKFRKFASQKNVHLTLVIHPRKEQEDVDLTLTSVFGTAKATQEADNVLILQ 595 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig15947.3448.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig15947.3448.1 >prot_H-paniculata_contig15947.3448.1 ID=prot_H-paniculata_contig15947.3448.1|Name=mRNA_H-paniculata_contig15947.3448.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=584bp MAFRLSGAEVVVKQCPFCHDTKNKADNMWKLSIGLKRGGAWICHRCGASGback to top mRNA from alignment at H-paniculata_contig15947:143..5444- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig15947.3448.1 ID=mRNA_H-paniculata_contig15947.3448.1|Name=mRNA_H-paniculata_contig15947.3448.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=5302bp|location=Sequence derived from alignment at H-paniculata_contig15947:143..5444- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig15947:143..5444- >mRNA_H-paniculata_contig15947.3448.1 ID=mRNA_H-paniculata_contig15947.3448.1|Name=mRNA_H-paniculata_contig15947.3448.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=3504bp|location=Sequence derived from alignment at H-paniculata_contig15947:143..5444- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |