mRNA_H-paniculata_contig15945.3447.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig15945.3447.1 vs. uniprot
Match: G3G6S3_9PHAE (Tetratricopeptide repeat protein 1 (Fragment) n=21 Tax=Fucaceae TaxID=3010 RepID=G3G6S3_9PHAE) HSP 1 Score: 145 bits (367), Expect = 2.330e-43 Identity = 75/103 (72.82%), Postives = 89/103 (86.41%), Query Frame = 1
Query: 1 FEAVVDDCTAALELNPRYVKALLRRAQANESLEKYDMALEDMKTLLEIDPNMKVARKGAPRLEKLHTEKMEKMKDEAIGKLKELGNSLLGHFGLSTDNFKMQQ 309
F+ VV DCTAALE++P Y+KALLRRAQANE LEKYD+ALED KTL+EIDPN++ A++ RLEKL +K EKMK+EAIGKLKELGNS+LG+FGLS DNFKM Q
Sbjct: 8 FDDVVVDCTAALEVDPSYMKALLRRAQANEQLEKYDLALEDTKTLVEIDPNLRSAKENMARLEKLQADKTEKMKEEAIGKLKELGNSVLGNFGLSLDNFKMVQ 110
BLAST of mRNA_H-paniculata_contig15945.3447.1 vs. uniprot
Match: A0A6D2KHN4_9BRAS (Uncharacterized protein n=1 Tax=Microthlaspi erraticum TaxID=1685480 RepID=A0A6D2KHN4_9BRAS) HSP 1 Score: 121 bits (303), Expect = 1.220e-31 Identity = 63/100 (63.00%), Postives = 77/100 (77.00%), Query Frame = 1
Query: 1 FEAVVDDCTAALELNPRYVKALLRRAQANESLEKYDMALEDMKTLLEIDPNMKVARKGAPRLEKLHTEKMEKMKDEAIGKLKELGNSLLGHFGLSTDNFK 300
+E V +CT ALELNP Y KAL+RRA+ANE LE ++ AL D+K +LE+DP+ ARKG RLE L EK EKMK+EAI KLKE+GNS+LG FG+S DNFK
Sbjct: 166 YEETVKECTKALELNPTYSKALVRRAEANEKLEHFEDALTDLKKILELDPSNDQARKGIRRLEPLAAEKREKMKEEAITKLKEMGNSILGRFGMSVDNFK 265
BLAST of mRNA_H-paniculata_contig15945.3447.1 vs. uniprot
Match: A0A218XR07_PUNGR (tetratricopeptide repeat protein 1-like n=3 Tax=Punica granatum TaxID=22663 RepID=A0A218XR07_PUNGR) HSP 1 Score: 119 bits (299), Expect = 4.310e-31 Identity = 62/99 (62.63%), Postives = 76/99 (76.77%), Query Frame = 1
Query: 4 EAVVDDCTAALELNPRYVKALLRRAQANESLEKYDMALEDMKTLLEIDPNMKVARKGAPRLEKLHTEKMEKMKDEAIGKLKELGNSLLGHFGLSTDNFK 300
E V +CT ALELNP+YVKALLRRA+A E +E ++ A+ DMK +LE+DP+ ARK RLE L EK EKMK+E IGKLKE+G+SLLG FG+S DNFK
Sbjct: 162 EDTVKECTKALELNPKYVKALLRRAEAQEKIENFEEAIADMKKILELDPSNDQARKAIYRLEPLAAEKREKMKEEMIGKLKEMGDSLLGRFGMSVDNFK 260
BLAST of mRNA_H-paniculata_contig15945.3447.1 vs. uniprot
Match: A0A1S3JTY5_LINUN (tetratricopeptide repeat protein 1 n=1 Tax=Lingula unguis TaxID=7574 RepID=A0A1S3JTY5_LINUN) HSP 1 Score: 119 bits (297), Expect = 1.130e-30 Identity = 62/103 (60.19%), Postives = 76/103 (73.79%), Query Frame = 1
Query: 1 FEAVVDDCTAALELNPRYVKALLRRAQANESLEKYDMALEDMKTLLEIDPNMKVARKGAPRLEKLHTEKMEKMKDEAIGKLKELGNSLLGHFGLSTDNFKMQQ 309
+E ++DCT ALELNP Y+KALLRRA+ E EK D ALED K ++E+DP AR+ RL + TE+ EKMKDE IGKLKELGN +L FG+STDNFK+QQ
Sbjct: 171 YEKAIEDCTKALELNPNYLKALLRRAEMYEKTEKLDEALEDYKKVIEMDPTQHTAREACIRLPQQITERNEKMKDEMIGKLKELGNMVLKPFGMSTDNFKLQQ 273
BLAST of mRNA_H-paniculata_contig15945.3447.1 vs. uniprot
Match: A0A1S3KF36_LINUN (tetratricopeptide repeat protein 1-like n=1 Tax=Lingula unguis TaxID=7574 RepID=A0A1S3KF36_LINUN) HSP 1 Score: 114 bits (286), Expect = 1.550e-30 Identity = 60/102 (58.82%), Postives = 74/102 (72.55%), Query Frame = 1
Query: 4 EAVVDDCTAALELNPRYVKALLRRAQANESLEKYDMALEDMKTLLEIDPNMKVARKGAPRLEKLHTEKMEKMKDEAIGKLKELGNSLLGHFGLSTDNFKMQQ 309
E ++DCT ALELNP Y+KALLRRA+ E EK D ALED K ++E+DP AR+ RL + TE+ EKMKDE +GKLKELGN +L FG+STDNFK+ Q
Sbjct: 31 EKAIEDCTKALELNPNYLKALLRRAEMYEKTEKLDEALEDYKKVIEMDPTQHTAREACIRLPQQITERNEKMKDEMMGKLKELGNMVLKPFGMSTDNFKLHQ 132
BLAST of mRNA_H-paniculata_contig15945.3447.1 vs. uniprot
Match: A0A1J7GKS3_LUPAN (Uncharacterized protein n=2 Tax=Lupinus TaxID=3869 RepID=A0A1J7GKS3_LUPAN) HSP 1 Score: 117 bits (293), Expect = 1.560e-30 Identity = 61/100 (61.00%), Postives = 75/100 (75.00%), Query Frame = 1
Query: 1 FEAVVDDCTAALELNPRYVKALLRRAQANESLEKYDMALEDMKTLLEIDPNMKVARKGAPRLEKLHTEKMEKMKDEAIGKLKELGNSLLGHFGLSTDNFK 300
+E + +CT ALELNP YVKAL+RR +A+E LE YD A+ DMK +LE+DP A+K RLE L EK EKMK+E IGKLKE+GNS+LG FG+S DNFK
Sbjct: 127 YEDTIKECTKALELNPVYVKALVRRGEAHEKLEHYDEAIADMKKILEVDPLNDQAKKVIRRLEPLAAEKREKMKEEMIGKLKEMGNSVLGRFGMSVDNFK 226
BLAST of mRNA_H-paniculata_contig15945.3447.1 vs. uniprot
Match: A0A7S0J1B8_9EUKA (Hypothetical protein n=1 Tax=Calcidiscus leptoporus TaxID=127549 RepID=A0A7S0J1B8_9EUKA) HSP 1 Score: 116 bits (291), Expect = 2.390e-30 Identity = 58/103 (56.31%), Postives = 77/103 (74.76%), Query Frame = 1
Query: 1 FEAVVDDCTAALELNPRYVKALLRRAQANESLEKYDMALEDMKTLLEIDPNMKVARKGAPRLEKLHTEKMEKMKDEAIGKLKELGNSLLGHFGLSTDNFKMQQ 309
+EAV++DCT+AL + P YVKAL+RRAQA E L++ ALEDM+T ++DP+ K A PRLE K+EK KDE +GKLK+LGNS+LG FG+S DNFK ++
Sbjct: 116 YEAVIEDCTSALAIKPEYVKALVRRAQAREELDQPTEALEDMRTAGKLDPDAKAATSAIPRLEAASNAKLEKQKDEMLGKLKDLGNSVLGRFGMSLDNFKAEK 218
BLAST of mRNA_H-paniculata_contig15945.3447.1 vs. uniprot
Match: A0A314Z536_PRUYE (Tetratricopeptide repeat protein 1 isoform X1 n=1 Tax=Prunus yedoensis var. nudiflora TaxID=2094558 RepID=A0A314Z536_PRUYE) HSP 1 Score: 114 bits (284), Expect = 3.790e-30 Identity = 59/99 (59.60%), Postives = 75/99 (75.76%), Query Frame = 1
Query: 4 EAVVDDCTAALELNPRYVKALLRRAQANESLEKYDMALEDMKTLLEIDPNMKVARKGAPRLEKLHTEKMEKMKDEAIGKLKELGNSLLGHFGLSTDNFK 300
E + +CT ALELNP Y+KALLRRA+A+E LE ++ A+ DMK +LE+DP+ A+K RL L EK EKMK+E IGKLK++GNSLLG FG+S DNFK
Sbjct: 42 EDAIKECTKALELNPSYMKALLRRAEAHEKLEHFEEAIADMKKILELDPSNDQAKKTIRRLGPLAEEKREKMKEEMIGKLKDMGNSLLGRFGMSVDNFK 140
BLAST of mRNA_H-paniculata_contig15945.3447.1 vs. uniprot
Match: A0A8K0HJN8_9ROSA (Uncharacterized protein n=1 Tax=Rhamnella rubrinervis TaxID=2594499 RepID=A0A8K0HJN8_9ROSA) HSP 1 Score: 117 bits (293), Expect = 4.010e-30 Identity = 59/100 (59.00%), Postives = 76/100 (76.00%), Query Frame = 1
Query: 1 FEAVVDDCTAALELNPRYVKALLRRAQANESLEKYDMALEDMKTLLEIDPNMKVARKGAPRLEKLHTEKMEKMKDEAIGKLKELGNSLLGHFGLSTDNFK 300
+E + +CT ALELNP Y+KAL+RRA+A+E LE +D A+ DMK + E+DP+ AR+ RL+ L EK EKMK+E IGKLKE+GNSLLG FG+S DNFK
Sbjct: 169 YEDTIKECTKALELNPSYMKALVRRAEAHEKLEHFDEAISDMKKITELDPSNDQARRAIRRLQPLAEEKREKMKEEMIGKLKEMGNSLLGRFGMSVDNFK 268
BLAST of mRNA_H-paniculata_contig15945.3447.1 vs. uniprot
Match: A0A6P5EAL6_ANACO (tetratricopeptide repeat protein 1-like n=1 Tax=Ananas comosus TaxID=4615 RepID=A0A6P5EAL6_ANACO) HSP 1 Score: 113 bits (282), Expect = 4.070e-30 Identity = 57/100 (57.00%), Postives = 75/100 (75.00%), Query Frame = 1
Query: 1 FEAVVDDCTAALELNPRYVKALLRRAQANESLEKYDMALEDMKTLLEIDPNMKVARKGAPRLEKLHTEKMEKMKDEAIGKLKELGNSLLGHFGLSTDNFK 300
++ + +CT ALELNP Y+KALLRRA+A+E LE Y+ A+ DMK ++E++P+ ARK LE L EK EKMK+E I KLKE+GNS+LG FG+S DNFK
Sbjct: 19 YDETIKECTKALELNPPYLKALLRRAEAHEKLEHYEEAIADMKKVIELEPSNDQARKSLQHLEPLAAEKREKMKEEMIEKLKEMGNSVLGRFGMSVDNFK 118 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig15945.3447.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig15945.3447.1 >prot_H-paniculata_contig15945.3447.1 ID=prot_H-paniculata_contig15945.3447.1|Name=mRNA_H-paniculata_contig15945.3447.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=103bp FEAVVDDCTAALELNPRYVKALLRRAQANESLEKYDMALEDMKTLLEIDPback to top mRNA from alignment at H-paniculata_contig15945:507..1510+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig15945.3447.1 ID=mRNA_H-paniculata_contig15945.3447.1|Name=mRNA_H-paniculata_contig15945.3447.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=1004bp|location=Sequence derived from alignment at H-paniculata_contig15945:507..1510+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig15945:507..1510+ >mRNA_H-paniculata_contig15945.3447.1 ID=mRNA_H-paniculata_contig15945.3447.1|Name=mRNA_H-paniculata_contig15945.3447.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=618bp|location=Sequence derived from alignment at H-paniculata_contig15945:507..1510+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |