prot_H-paniculata_contig15941.3445.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig15941.3445.1
Unique Nameprot_H-paniculata_contig15941.3445.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length498
Homology
BLAST of mRNA_H-paniculata_contig15941.3445.1 vs. uniprot
Match: A0A6H5KC76_9PHAE (Beta-galactosidase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KC76_9PHAE)

HSP 1 Score: 300 bits (767), Expect = 4.580e-87
Identity = 239/497 (48.09%), Postives = 271/497 (54.53%), Query Frame = 0
Query:    1 MQPFDVSLQPKGIEINRDITDDATASASRPTSSRSFRATMTLSVLNRYDHLSEDPTALWDSLIFRCELEADGVAVATGQ-LEPCGSSSSPSSCFPXXXXXXXXXXXXXCA----AEPGDGSAHCAAAAVAARVTFEVPSLLLPG--QECRLKVTGVLREDKPWAAMGHVVGHVQLDLCCEEMSQAYASDSPPDSASPSSTECQHQPQPLVDNNXXXXXXXXXXXXNQKYDLPEVKEDKEGGLLEVRVAALAIGDGGIRAVFDMRDGCLSQLQLLRSNMGIGVVADDGGGEGGGGRVVDLLGSLGDDNSPEEGKAGEGDEEAGXXXXXXXXNSRRSLGLQFHRAPTDNDRGGYVGQWDAAGLLGPALGPFDSSASWRRRDADGAVVVTTEFSLRPRAPKPRFCRLLYKLRTFRDEAETHAASAVPPPDAAIPTISFTGLRDDEVSFVRALAAAWRLGHAAEDKDGGSG-GVRVWLPTVRLNSTHDLAAGMSVAPESGV 489
            MQPF  S+ P G+      T     SA  PT       T+TLS+ NRYD        LWD L+F   +E DGV +A G  L P            XXXXXXXXXXXXX A    A  G+G    A    AA + FE    L  G  +EC L VTG LR    WA  GH VGHVQL+L              P+S++ + T             XXXXXXXXXXXX                           GD G+RAVFDM+ G LSQLQLL            GG EG     VDLL              GEG+            +SRR+LGLQF+RAPTDNDRGGYVG+WD AGLL PALGPF + + W RR+ADGAV+VTTEF LRPRAPKPR C+L YKLR FRDEAE  ++           T+S   LRDDEVSFVRA AAAWRLGHAAED  GG G GVRVWLP VRLNSTHD+AAGMSVAPE+ V
Sbjct:  430 MQPFHASILPNGV-----TTTTLRPSAPSPT-------TVTLSIANRYDFTDN----LWDILVFGWHVEVDGVVMARGDDLSPSSPXXXXXXXXXXXXXXXXXXXXXXXASGFPAAAGEGGGAGAGRVTAATLIFESLPSLTEGVEKECWLTVTGRLRVATAWAPAGHKVGHVQLEL-----------PRSPESSAGAETSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGDSGVRAVFDMQSGRLSQLQLL------------GGDEG---DAVDLL-EXXXXXXXXXXVDGEGE------------HSRRALGLQFNRAPTDNDRGGYVGRWDVAGLLEPALGPFGARSGWERREADGAVLVTTEFKLRPRAPKPRLCKLFYKLRAFRDEAEACSSXXXXXXXXXXTTLSLQSLRDDEVSFVRATAAAWRLGHAAEDNSGGGGKGVRVWLPPVRLNSTHDVAAGMSVAPETAV 871          
BLAST of mRNA_H-paniculata_contig15941.3445.1 vs. uniprot
Match: D7FS01_ECTSI (Beta-galactosidase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FS01_ECTSI)

HSP 1 Score: 206 bits (523), Expect = 8.850e-54
Identity = 119/211 (56.40%), Postives = 137/211 (64.93%), Query Frame = 0
Query:  280 GGGEGGGGRVVDLLGSLGDDNSPEEGKAGEGDEEAGXXXXXXXXNSRRSLGLQFHRAPTDNDRGGYVGQWDAAGLLGPALGPFDSSASWRRRDADGAVVVTTEFSLRPRAPKPRFCRLLYKLRTFRDEAETHAASAVPPPDAAIPTISFTGLRDDEVSFVRALAAAWRLGHAAEDKDGGSG-GVRVWLPTVRLNSTHDLAAGMSVAPESGV 489
            GG EGG    VDLL ++ +D+  ++G  GE +            +SRR+LGLQF+RAPTDNDRGGYVG+WD AGLL PALGPF + + W RR+ADGAV+VTTEF LRPRAPKPR C+L YK                                   VSFVRA AAAWRLGHAAED  GGSG GVRVWLP VRLNSTHD+AAGMSVAPE+ V
Sbjct: 1013 GGDEGG---AVDLLEAVENDDD-DDGVNGEDE------------HSRRALGLQFNRAPTDNDRGGYVGRWDVAGLLEPALGPFGARSGWERREADGAVLVTTEFKLRPRAPKPRLCKLFYK-----------------------------------VSFVRATAAAWRLGHAAEDNSGGSGKGVRVWLPPVRLNSTHDVAAGMSVAPETAV 1172          
BLAST of mRNA_H-paniculata_contig15941.3445.1 vs. uniprot
Match: A0A835ZBT9_9STRA (Beta-galactosidase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZBT9_9STRA)

HSP 1 Score: 95.9 bits (237), Expect = 4.610e-17
Identity = 77/281 (27.40%), Postives = 99/281 (35.23%), Query Frame = 0
Query:  329 LGLQFHRAPTDNDRGGYVGQWDAAGLLGPALGPFDSSASWRRRDADGAVVVTTEFSLRPRAPKPRFCRLLYKLRTFRDEAET---------------------------------------------------------------------------HAASAV-----------------------------------------PPPDA-------AIPTISFTGLRDDEVSFVRALAAAWRLGHAAEDKDGGSGGVRVWLPTVRLNSTHDLAAGMSVAPE 486
            L LQ HRAPT NDRGGY+  W AAG  GP  GP+DS+ SW +R+ DGA VV T ++LRP     R C L  K+      A T                                                                           HA  A+                                         P P+        A+ ++   GL  +E +FVRA+AAA+RLGHA         GVR+W+P+V   +TH +  GMS APE
Sbjct:  910 LSLQLHRAPTSNDRGGYLALWAAAGTSGPLDGPYDSTLSWSQREGDGAAVVKTAYTLRPHGGNVRLCELAVKVGELASRAPTVRQQFHGERVHNQANGYVRAAAAAVTAMAPSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHARRALLLARPLSLAPVVVGALHQVRLLILEYVQHLAVAQLLGVLAQPHPETDGVVSSVALASMEMAGLTSEETTFVRAVAAAYRLGHAP--LPAAQQGVRLWVPSVPSCTTHPIGEGMSAAPE 1188          
BLAST of mRNA_H-paniculata_contig15941.3445.1 vs. uniprot
Match: A0A7S4D896_HETAK (Beta-galactosidase (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4D896_HETAK)

HSP 1 Score: 79.3 bits (194), Expect = 5.680e-13
Identity = 58/159 (36.48%), Postives = 79/159 (49.69%), Query Frame = 0
Query:  331 LQFHRAPTDNDRGGYVGQWDAAGL--LGPALGPFDSSASWRRRDADGAVVVTTEFSLRPRAPKPRFCRLLYKLRTFRDEAETHAASAVPPPDAAIPTISFTGLRDDEVSFVRALAAAWRLGHAAEDKDGGSGGVRVWLPTVRLNSTHDLAAGMSVAPES 487
            LQFHRA TDND GGY  QW A G+    P    +D +      +A G   V ++F  RP+        L+ K+ +F ++                  + F  L   E +FV  LAAA RL H  E+K+ G   VRVW P + L +TH +A G+S+APES
Sbjct:   68 LQFHRAATDNDNGGYSAQWKAVGIDVAPPEPDKYDVTCG---ENAQG-FQVCSKFEYRPQVDSA-LVPLIEKINSFINDGNKTE-------------LEFPDLERRERAFVHNLAAANRLAH--ENKEEGDKIVRVWKPKMHLCTTHHVAQGISLAPES 206          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig15941.3445.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A6H5KC76_9PHAE4.580e-8748.09Beta-galactosidase n=1 Tax=Ectocarpus sp. CCAP 131... [more]
D7FS01_ECTSI8.850e-5456.40Beta-galactosidase n=1 Tax=Ectocarpus siliculosus ... [more]
A0A835ZBT9_9STRA4.610e-1727.40Beta-galactosidase n=1 Tax=Tribonema minus TaxID=3... [more]
A0A7S4D896_HETAK5.680e-1336.48Beta-galactosidase (Fragment) n=1 Tax=Heterosigma ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036156Beta-Galactosidase/glucuronidase domain superfamilySUPERFAMILY49303beta-Galactosidase/glucuronidase domaincoord: 127..170

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig15941contigH-paniculata_contig15941:303..5861 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig15941.3445.1mRNA_H-paniculata_contig15941.3445.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig15941 303..5875 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig15941.3445.1 ID=prot_H-paniculata_contig15941.3445.1|Name=mRNA_H-paniculata_contig15941.3445.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=498bp
MQPFDVSLQPKGIEINRDITDDATASASRPTSSRSFRATMTLSVLNRYDH
LSEDPTALWDSLIFRCELEADGVAVATGQLEPCGSSSSPSSCFPSSSEEP
PPPSSSLCAAEPGDGSAHCAAAAVAARVTFEVPSLLLPGQECRLKVTGVL
REDKPWAAMGHVVGHVQLDLCCEEMSQAYASDSPPDSASPSSTECQHQPQ
PLVDNNDNNDDNNNNSSSNQKYDLPEVKEDKEGGLLEVRVAALAIGDGGI
RAVFDMRDGCLSQLQLLRSNMGIGVVADDGGGEGGGGRVVDLLGSLGDDN
SPEEGKAGEGDEEAGRKGIGRNENSRRSLGLQFHRAPTDNDRGGYVGQWD
AAGLLGPALGPFDSSASWRRRDADGAVVVTTEFSLRPRAPKPRFCRLLYK
LRTFRDEAETHAASAVPPPDAAIPTISFTGLRDDEVSFVRALAAAWRLGH
AAEDKDGGSGGVRVWLPTVRLNSTHDLAAGMSVAPESGVQGGEEEKEA
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036156Beta-gal/glucu_dom_sf