mRNA_H-paniculata_contig15923.3432.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig15923.3432.1 vs. uniprot
Match: A0A6H5JIM0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JIM0_9PHAE) HSP 1 Score: 147 bits (370), Expect = 1.710e-40 Identity = 75/146 (51.37%), Postives = 95/146 (65.07%), Query Frame = 1
Query: 1 VDESWFYLIRDKEKVRMFPGEEKVGSIKVQHKSHISKLMFICAVSRPDPAHDFDGKIGIWRVCVIKEAQRT-------TARRARG----------------EEYDVNVTIDAEWYRSWYLKDLLSAVKNKMWRLEGEDAIVQQDGA 369
+DESWFYL+R+KEKVR+F GE+ G +V H+SH+ K+M I A +RPDPAHDFDGKIGIWR+CVI+ AQR+ TA R EEY+ + TIDAEWY+ WY+ LL A+K KM L + +VQQDGA
Sbjct: 157 LDESWFYLMREKEKVRVFSGEDVPGPPRVPHESHLPKIMVIVANARPDPAHDFDGKIGIWRICVIETAQRSSKKSTSSTAPSTRSGWREPPHGRNRPAIVQEEYEFDCTIDAEWYKDWYIDVLLPAIKEKMPWLRSKRVVVQQDGA 302
BLAST of mRNA_H-paniculata_contig15923.3432.1 vs. uniprot
Match: A0A5D6XR23_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XR23_9STRA) HSP 1 Score: 70.5 bits (171), Expect = 3.350e-12 Identity = 43/127 (33.86%), Postives = 67/127 (52.76%), Query Frame = 1
Query: 1 VDESWFYLIRDKEKVRMFPGEEKVGSIKVQHKSHISKLMFICAVSRP--DPAH--DFDGKIGIWRVCVIKEAQRTTARRARGEEYDVNVTIDAEWYRSWYLKDLLSAVKNKMWRLEGEDAIVQQDGA 369
+DE WF + + K +V + P E QHKSH+ KLMF+CA++RP DPA FD IGIW A R+++ R G + + E Y++ + +++ AV +K G ++Q+D A
Sbjct: 30 IDEKWFVVNKTKRRVYLTPTEPNPQR-HAQHKSHLPKLMFLCAITRPRVDPATGASFDRGIGIWPFAEEIPAYRSSSNRQAGTLETKPLPANKETYKAMIMTEVVPAVVSKWPAWGGRHIVLQRDNA 155
BLAST of mRNA_H-paniculata_contig15923.3432.1 vs. uniprot
Match: F0WV30_9STRA (Transposase putative n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0WV30_9STRA) HSP 1 Score: 70.1 bits (170), Expect = 1.310e-11 Identity = 39/127 (30.71%), Postives = 64/127 (50.39%), Query Frame = 1
Query: 1 VDESWFYLIRDKEKVRMFPGEEKVGSIKVQHKSHISKLMFICAVSRPD----PAHDFDGKIGIWRVCVIKEAQRTTARRARGEEYDVNVTIDAEWYRSWYLKDLLSAVKNKMWRLEGEDAIVQQDGA 369
+DE WF++ + K +V + P E + +HKSHI K+MF+CAV+RP FDG++G+W A+R + R G + + E Y+ + +L A+K G ++Q+D A
Sbjct: 211 LDEKWFFMKKTKRRVYLTPTEP-TPYLHTRHKSHIPKIMFLCAVARPRINSCTGEVFDGRLGMWPFANYAPAERASRNREAGTLVLKSFPANKETYKRMLIDSVLPAIKLNWPSWSGRRIVLQRDNA 336
BLAST of mRNA_H-paniculata_contig15923.3432.1 vs. uniprot
Match: A0A484N8H9_9ASTE (Uncharacterized protein n=1 Tax=Cuscuta campestris TaxID=132261 RepID=A0A484N8H9_9ASTE) HSP 1 Score: 70.1 bits (170), Expect = 1.440e-11 Identity = 47/128 (36.72%), Postives = 66/128 (51.56%), Query Frame = 1
Query: 1 VDESWFYLIRDKEKVRMFPGEEKVGSIKVQHKSHISKLMFICAVSRP----DPAHDFDGKIGIWRVCVIKEAQRTTARRARGE-EYDVNVTIDAEWYRSWYLKDLLSAVKNKMWRLEGEDAIVQQDGA 369
+DE WF + ++K P E Q KSHI K+MF+ AVSRP D A +DGKIGI+ +A+R++ R G E +I+ + + L+ LL A+K K W D I+QQD A
Sbjct: 212 IDEKWFNITKEKTTFYALPDEPDPYRT-AQSKSHIPKIMFLAAVSRPRFGNDGAVVWDGKIGIFPFTYEAQAKRSSKNRPAGTLEVKATTSINRDEIKKMLLEKLLPAIKEK-WPGPTRDVIIQQDNA 337
BLAST of mRNA_H-paniculata_contig15923.3432.1 vs. uniprot
Match: Q8W1R1_AVESA (Transposase (Fragment) n=1 Tax=Avena sativa TaxID=4498 RepID=Q8W1R1_AVESA) HSP 1 Score: 66.2 bits (160), Expect = 1.840e-11 Identity = 45/129 (34.88%), Postives = 67/129 (51.94%), Query Frame = 1
Query: 1 VDESWFYLIRDKEKVRMFPGEEKVGSIKVQHKSHISKLMFICAVSRP--DPAHD--FDGKIGIWRVCVIKEAQRTTARRARGE-EYDVNVTIDAEWYRSWYLKDLLSAVKNKMWRLEGEDAI-VQQDGA 369
+DE WFY R +K + E +HKSHI K+MF+CAV+RP D A + FDGK+G+W A++ + R RG E V ++ + R + + +L A+K K + I +QQD A
Sbjct: 1 IDEKWFYRSRLNQKFYLCNDEPDPHRC-TKHKSHIDKVMFLCAVARPRFDAAGNCTFDGKLGVWAFVEEVAAKKKSKNRGRGTLETKVLPKVNMQVNRQYLINHVLPAIKAKWPEEDRHQTIWIQQDNA 128
BLAST of mRNA_H-paniculata_contig15923.3432.1 vs. uniprot
Match: UPI002008F034 (uncharacterized protein LOC125206616 n=4 Tax=Salvia TaxID=21880 RepID=UPI002008F034) HSP 1 Score: 68.2 bits (165), Expect = 6.750e-11 Identity = 41/128 (32.03%), Postives = 67/128 (52.34%), Query Frame = 1
Query: 1 VDESWFYLIRDKEKVRMFPGEEKVGSIKVQHKSHISKLMFICAVSRP----DPAHDFDGKIGIWRVCVIKEAQRTTARRARGE-EYDVNVTIDAEWYRSWYLKDLLSAVKNKMWRLEGEDAIVQQDGA 369
+DE WFY+ + ++ + P E++ + K +I+K+MF+CAVSRP D +DGK+GI+ + AQR + R RG E ++ E R + ++ A+K K +D +QQD A
Sbjct: 171 IDEKWFYMTKASDRYYLLPDEDEPYR-SCKSKRYITKVMFMCAVSRPHFGMDGQATYDGKVGIFPFTEVLPAQRKSKNRPRGTMETKAIHSVTKEVMRDCLINKIIPAIKAKWPVWASKDIYIQQDNA 297
BLAST of mRNA_H-paniculata_contig15923.3432.1 vs. uniprot
Match: UPI001C251DD6 (uncharacterized protein LOC121809230 n=1 Tax=Salvia splendens TaxID=180675 RepID=UPI001C251DD6) HSP 1 Score: 66.2 bits (160), Expect = 1.570e-10 Identity = 41/128 (32.03%), Postives = 67/128 (52.34%), Query Frame = 1
Query: 1 VDESWFYLIRDKEKVRMFPGEEKVGSIKVQHKSHISKLMFICAVSRPDPAHD----FDGKIGIWRVCVIKEAQRTTARRARGEEYDVNV-TIDAEWYRSWYLKDLLSAVKNKMWRLEGEDAIVQQDGA 369
+DE WFY+ + ++ + P E++ + K I+K+MF+CAVSRP D FDGKIGI+ A+R + R RG ++ +++ E + L ++ A+K K +D +QQD A
Sbjct: 64 IDEKWFYMTKASDRYYLLPDEDEPYRA-CKSKRFITKVMFMCAVSRPQFGTDGQTIFDGKIGIFSFTEQVPAKRKSKNRPRGTLETKHIPSVNKEAMKECLLNQIIPAIKAKWPANASKDIYIQQDNA 190
BLAST of mRNA_H-paniculata_contig15923.3432.1 vs. uniprot
Match: UPI001263BEDE (uncharacterized protein LOC116126997 n=1 Tax=Pistacia vera TaxID=55513 RepID=UPI001263BEDE) HSP 1 Score: 65.9 bits (159), Expect = 1.810e-10 Identity = 46/130 (35.38%), Postives = 75/130 (57.69%), Query Frame = 1
Query: 1 VDESWFYLIRDKEKVRMFPGEEKVGSIKVQHKSHISKLMFICAVS--RPDPAHD--FDGKIGIWRVCVIKEAQRTTARRARG--EEYDVNVTIDAEWYRSWYLKDLLSAVKNKMWRLE-GEDAIVQQDGA 369
VDE WFY+ + EK + P E++ + K+ I+K+MF+ V+ R D + + F GKIGI+ + A+R++ R G E +N +I+ E YRS+ +K LL A+++K R++ G +QQD A
Sbjct: 7 VDEKWFYMTKQSEKYYLLPDEDEPLRT-CKSKTFITKVMFLATVTCLRFDESRNELFSGKIGIFPFINKEPARRSSKNRFAGTMETKTIN-SINKEIYRSYIIKKLLPAIRDKWPRIDAGSPIFIQQDNA 134
BLAST of mRNA_H-paniculata_contig15923.3432.1 vs. uniprot
Match: UPI002009DA99 (uncharacterized protein LOC125209340 n=1 Tax=Salvia hispanica TaxID=49212 RepID=UPI002009DA99) HSP 1 Score: 66.2 bits (160), Expect = 2.730e-10 Identity = 41/128 (32.03%), Postives = 66/128 (51.56%), Query Frame = 1
Query: 1 VDESWFYLIRDKEKVRMFPGEEKVGSIKVQHKSHISKLMFICAVSRP----DPAHDFDGKIGIWRVCVIKEAQRTTARRARGE-EYDVNVTIDAEWYRSWYLKDLLSAVKNKMWRLEGEDAIVQQDGA 369
+DE WFY+ + ++ + P E++ + K I+K+MF+CAVSRP D +DGK+GI+ + AQR + R RG E ++ E R + ++ A+K K +D +QQD A
Sbjct: 68 IDEKWFYMTKASDRYYLLPDEDEPYR-SCKSKRFITKVMFMCAVSRPHFGMDGQATYDGKVGIFPFTEVLPAQRKSKNRPRGTMETKPLHSVTKEVMRDCLINKIIPAIKAKWPIWASKDIYIQQDNA 194
BLAST of mRNA_H-paniculata_contig15923.3432.1 vs. uniprot
Match: UPI00200958F7 (uncharacterized protein LOC125195984 n=2 Tax=Salvia hispanica TaxID=49212 RepID=UPI00200958F7) HSP 1 Score: 66.2 bits (160), Expect = 3.200e-10 Identity = 41/128 (32.03%), Postives = 66/128 (51.56%), Query Frame = 1
Query: 1 VDESWFYLIRDKEKVRMFPGEEKVGSIKVQHKSHISKLMFICAVSRP----DPAHDFDGKIGIWRVCVIKEAQRTTARRARGE-EYDVNVTIDAEWYRSWYLKDLLSAVKNKMWRLEGEDAIVQQDGA 369
+DE WFY+ + ++ + P E++ + K I+K+MF+CAVSRP D +DGK+GI+ + AQR + R RG E ++ E R + ++ A+K K +D +QQD A
Sbjct: 171 IDEKWFYMTKASDRYYLLPDEDEPYR-SCKSKRFITKVMFMCAVSRPHFGMDGQATYDGKVGIFPFTEVLPAQRKSKNRPRGTMETKPLHSVTKEVMRDCLINKIIPAIKAKWPIWASKDIYIQQDNA 297 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig15923.3432.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig15923.3432.1 >prot_H-paniculata_contig15923.3432.1 ID=prot_H-paniculata_contig15923.3432.1|Name=mRNA_H-paniculata_contig15923.3432.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=123bp VDESWFYLIRDKEKVRMFPGEEKVGSIKVQHKSHISKLMFICAVSRPDPAback to top mRNA from alignment at H-paniculata_contig15923:3231..3599- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig15923.3432.1 ID=mRNA_H-paniculata_contig15923.3432.1|Name=mRNA_H-paniculata_contig15923.3432.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=369bp|location=Sequence derived from alignment at H-paniculata_contig15923:3231..3599- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig15923:3231..3599- >mRNA_H-paniculata_contig15923.3432.1 ID=mRNA_H-paniculata_contig15923.3432.1|Name=mRNA_H-paniculata_contig15923.3432.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=738bp|location=Sequence derived from alignment at H-paniculata_contig15923:3231..3599- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |