mRNA_H-paniculata_contig15903.3422.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig15903.3422.1
Unique NamemRNA_H-paniculata_contig15903.3422.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
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BLAST of mRNA_H-paniculata_contig15903.3422.1 vs. uniprot
Match: A0A6H5JII2_9PHAE (Cytosolic Fe-S cluster assembly factor NUBP1 homolog n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JII2_9PHAE)

HSP 1 Score: 338 bits (867), Expect = 2.630e-114
Identity = 163/189 (86.24%), Postives = 177/189 (93.65%), Query Frame = 1 
Query:    1 VGLLDVDICGPSVPRMLGLTGQEVHQSSSGWSPVWVNDGLGVMSIGFMLPQQDNAVIWRGPRKNGLIKQFLTDVNWGQLDYLVIDTPPGTSDEHMSVVKYLEGCGVDGAVVVTTPQEVAMADVRKEINFCRKTGLKVLGIVENMSGLTVPMSELSFCDPTTGEDKTEQAKKLMREKAPELLQLMAQVRV 567
            VGLLD+DICGPSVPRMLGLTG+EVHQSSSGWSPVWV DGLGVMSIGFMLPQQDNAVIWRGP+KNGLIKQFLTDV+WGQLDYLVIDTPPGTSDEHMSVVKYL GC VDGAVVVTTPQEVAMADVRKE++FCRKTGL VLG+VENMSGLTVP+SEL F D  TGEDKTE A+ ++REKAP+LL+L+AQ  V
Sbjct:  108 VGLLDIDICGPSVPRMLGLTGREVHQSSSGWSPVWVTDGLGVMSIGFMLPQQDNAVIWRGPKKNGLIKQFLTDVDWGQLDYLVIDTPPGTSDEHMSVVKYLGGCNVDGAVVVTTPQEVAMADVRKELSFCRKTGLNVLGVVENMSGLTVPVSELLFVDKATGEDKTESARAILREKAPQLLELIAQTTV 296
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BLAST of mRNA_H-paniculata_contig15903.3422.1 vs. uniprot
Match: A0A6V1SZ98_HETAK (Cytosolic Fe-S cluster assembly factor NUBP1 homolog n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1SZ98_HETAK)

HSP 1 Score: 296 bits (758), Expect = 1.170e-97
Identity = 139/185 (75.14%), Postives = 167/185 (90.27%), Query Frame = 1 
Query:    1 VGLLDVDICGPSVPRMLGLTGQEVHQSSSGWSPVWVNDGLGVMSIGFMLPQQDNAVIWRGPRKNGLIKQFLTDVNWGQLDYLVIDTPPGTSDEHMSVVKYLEGCGVDGAVVVTTPQEVAMADVRKEINFCRKTGLKVLGIVENMSGLTVPMSELSFCDPTTGEDKTEQAKKLMREKAPELLQLMA 555
            VGLLDVDICGPSVP MLGL GQEVHQS+SGWSPV+V D LGVMSIGFMLP+QD+AVIWRGPRKNGLI+QFLTDV+WG LDYLV+DTPPGTSDEH+S+V+YL+G GVDGAVVVTTPQEVAMADVRKE++FC KTGL V+G+VENMSGL +P+++L F D  +GED+T  A +L+R + PE+L+++A
Sbjct:   95 VGLLDVDICGPSVPTMLGLVGQEVHQSASGWSPVYVGDRLGVMSIGFMLPRQDDAVIWRGPRKNGLIRQFLTDVDWGHLDYLVVDTPPGTSDEHISIVQYLKGAGVDGAVVVTTPQEVAMADVRKELSFCAKTGLPVVGLVENMSGLQLPVADLRFADRASGEDRTAAALRLLRARCPEVLEMVA 279
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BLAST of mRNA_H-paniculata_contig15903.3422.1 vs. uniprot
Match: A0A7S2UWA7_9STRA (Cytosolic Fe-S cluster assembly factor NUBP1 homolog n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UWA7_9STRA)

HSP 1 Score: 288 bits (737), Expect = 1.880e-94
Identity = 138/183 (75.41%), Postives = 166/183 (90.71%), Query Frame = 1 
Query:    1 VGLLDVDICGPSVPRMLGLTGQEVHQSSSGWSPVWVNDGLGVMSIGFMLPQQDNAVIWRGPRKNGLIKQFLTDVNWGQLDYLVIDTPPGTSDEHMSVVKYLEGCGVDGAVVVTTPQEVAMADVRKEINFCRKTGLKVLGIVENMSGLTVPMSELSFCDPTTGEDKTEQAKKLMREKAPELLQL 549
            VGLLD+DICGPSVPRMLGLTGQEVHQSS+GWSPV+V+D LGVMSIGFMLP QD+AVIWRGPRKNGLI+QFLTDV+WGQLDYLVIDTPPGTSDEH+S+V+YL+GC  DGAVVVTTPQEVAMADVRKE++FC KTG++VLG+VENM+  ++P++EL+F D    ED+TE+   ++R+ AP+LL L
Sbjct:   96 VGLLDLDICGPSVPRMLGLTGQEVHQSSTGWSPVYVSDLLGVMSIGFMLPGQDDAVIWRGPRKNGLIRQFLTDVDWGQLDYLVIDTPPGTSDEHISIVQYLKGCAADGAVVVTTPQEVAMADVRKELSFCSKTGIRVLGLVENMAASSLPLTELTFQDGA--EDRTEEVFAVLRQVAPQLLDL 276
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BLAST of mRNA_H-paniculata_contig15903.3422.1 vs. uniprot
Match: A0A7S1XNV4_9STRA (Cytosolic Fe-S cluster assembly factor NUBP1 homolog n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XNV4_9STRA)

HSP 1 Score: 281 bits (718), Expect = 1.330e-91
Identity = 134/189 (70.90%), Postives = 163/189 (86.24%), Query Frame = 1 
Query:    1 VGLLDVDICGPSVPRMLGLTGQEVHQSSSGWSPVWVNDGLGVMSIGFMLPQQDNAVIWRGPRKNGLIKQFLTDVNWGQLDYLVIDTPPGTSDEHMSVVKYLEGCGVDGAVVVTTPQEVAMADVRKEINFCRKTGLKVLGIVENMSGLTVPMSELSFCDPTTGEDKTEQAKKLMREKAPELLQLMAQVRV 567
            VGLLD+DICGPSVPRMLGLTGQ+VHQS+SGWSPV+V D LGVMSIGFMLP  D+AVIWRGPRK+GLIK FLT+V+WG+LDYL+IDTPPGTSDEH+S+V+YL    VDGA+VVTTPQEV+MADVRKE++FC K+GLKVLG+VENM+GL VPM  L F DP+ G D++++  K +   APE+L ++A V V
Sbjct:  115 VGLLDIDICGPSVPRMLGLTGQQVHQSASGWSPVYVADNLGVMSIGFMLPSTDDAVIWRGPRKSGLIKSFLTEVHWGELDYLIIDTPPGTSDEHISIVQYLRAIEVDGALVVTTPQEVSMADVRKELSFCAKSGLKVLGLVENMAGLRVPMRNLRFTDPS-GADRSDEITKKLEAAAPEVLSMLASVNV 302
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BLAST of mRNA_H-paniculata_contig15903.3422.1 vs. uniprot
Match: T0RQD5_SAPDV (Cytosolic Fe-S cluster assembly factor NUBP1 homolog n=3 Tax=Saprolegniaceae TaxID=4764 RepID=T0RQD5_SAPDV)

HSP 1 Score: 280 bits (715), Expect = 1.590e-91
Identity = 131/189 (69.31%), Postives = 161/189 (85.19%), Query Frame = 1 
Query:    1 VGLLDVDICGPSVPRMLGLTGQEVHQSSSGWSPVWVNDGLGVMSIGFMLPQQDNAVIWRGPRKNGLIKQFLTDVNWGQLDYLVIDTPPGTSDEHMSVVKYLEGCGVDGAVVVTTPQEVAMADVRKEINFCRKTGLKVLGIVENMSGLTVPMSELSFCDPTTGEDKTEQAKKLMREKAPELLQLMAQVRV 567
            VGLLDVDI GPSVPRMLGL+GQEVHQS+ GWSPV+V+D LGVMSIGFMLP QD+A+IWRGP+K+GLIKQFLTDV WG+LDYL+IDTPPGTSDEH+S+V+Y++   +DGAVVVTTPQEVAMADVRKE+NFCRKT L +LG+VENM+G+   + ++ F +P T  D T    +++REKAPELL    Q++V
Sbjct:   89 VGLLDVDITGPSVPRMLGLSGQEVHQSNDGWSPVYVDDNLGVMSIGFMLPNQDDAIIWRGPKKSGLIKQFLTDVTWGELDYLIIDTPPGTSDEHISIVQYMKETKIDGAVVVTTPQEVAMADVRKELNFCRKTNLPILGVVENMAGIQQTLDQVKFVNPATSSDDTAHFLQVLREKAPELLPYAVQLQV 277
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BLAST of mRNA_H-paniculata_contig15903.3422.1 vs. uniprot
Match: W7TWQ3_9STRA (Cytosolic Fe-S cluster assembly factor NUBP1 homolog n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TWQ3_9STRA)

HSP 1 Score: 279 bits (714), Expect = 8.260e-91
Identity = 134/200 (67.00%), Postives = 172/200 (86.00%), Query Frame = 1 
Query:    1 VGLLDVDICGPSVPRMLGLTGQEVHQSSSGWSPVWVNDGLGVMSIGFMLPQQDNAVIWRGPRKNGLIKQFLTDVNWGQLDYLVIDTPPGTSDEHMSVVKYL-EGCGVDGAVVVTTPQEVAMADVRKEINFCRKTGLKVLGIVENMSGLTVPMSELSFCDPTT--------GEDKTEQA----KKLMREKAPELLQLMAQV 561
            VGLLDVDICGPSVPR++GLTGQEVHQS++GWSPV+V+D LGVMSIGFMLP  D+AVIWRGPRKNGLIKQFLTDV+WG+LDYL+IDTPPGTSDEH+S+++YL +GCG+DGAVVVTTPQEVAMADVRKE+NFC+KTGL+V+G+VENMSGL VP++ L+F +           G ++T+++    K ++++K  E+L+ + +V
Sbjct:  102 VGLLDVDICGPSVPRVMGLTGQEVHQSAAGWSPVYVDDNLGVMSIGFMLPNADDAVIWRGPRKNGLIKQFLTDVDWGELDYLIIDTPPGTSDEHLSIIQYLKDGCGIDGAVVVTTPQEVAMADVRKELNFCKKTGLQVVGVVENMSGLNVPLTALNFLEKPVARHSGNGAGIEETDKSMETDKPVIKDKTAEVLEALRKV 301
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BLAST of mRNA_H-paniculata_contig15903.3422.1 vs. uniprot
Match: A0A3R6VDL5_9STRA (Cytosolic Fe-S cluster assembly factor NUBP1 homolog n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A3R6VDL5_9STRA)

HSP 1 Score: 276 bits (705), Expect = 9.110e-90
Identity = 129/189 (68.25%), Postives = 159/189 (84.13%), Query Frame = 1 
Query:    1 VGLLDVDICGPSVPRMLGLTGQEVHQSSSGWSPVWVNDGLGVMSIGFMLPQQDNAVIWRGPRKNGLIKQFLTDVNWGQLDYLVIDTPPGTSDEHMSVVKYLEGCGVDGAVVVTTPQEVAMADVRKEINFCRKTGLKVLGIVENMSGLTVPMSELSFCDPTTGEDKTEQAKKLMREKAPELLQLMAQVRV 567
            VGLLDVDI GPSVPRMLGL GQEVHQS+ GWSPV+V+D LGVMSIGFMLP  D+A+IWRGP+K+GLIKQFLTDV+WG LDYL+IDTPPGTSDEH+S+V+YL+   +DGAVVVTTPQEVAMADVRKE+NFC+KT + ++G+VENM+GL   +S  +F DP T  D T+    +++ KAPELL +  Q++V
Sbjct:  108 VGLLDVDITGPSVPRMLGLQGQEVHQSNEGWSPVYVDDNLGVMSIGFMLPNADDAIIWRGPKKSGLIKQFLTDVHWGDLDYLIIDTPPGTSDEHISIVQYLKDAQIDGAVVVTTPQEVAMADVRKELNFCKKTSVPIIGVVENMAGLQQDLSRCNFVDPMTSVDHTQHVLDVLKAKAPELLSMAVQLQV 296
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BLAST of mRNA_H-paniculata_contig15903.3422.1 vs. uniprot
Match: A0A485KZS6_9STRA (Cytosolic Fe-S cluster assembly factor NUBP1 homolog n=2 Tax=Aphanomyces TaxID=100860 RepID=A0A485KZS6_9STRA)

HSP 1 Score: 275 bits (702), Expect = 1.070e-88
Identity = 131/192 (68.23%), Postives = 161/192 (83.85%), Query Frame = 1 
Query:    1 VGLLDVDICGPSVPRMLGLTGQEVHQSSSGWSPVWVNDGLGVMSIGFMLPQQDNAVIWRGPRKNGLIKQFLTDVNWGQLDYLVIDTPPGTSDEHMSVVKYLEGCGVDGAVVVTTPQEVAMADVRKEINFCRKTGLKVLG---IVENMSGLTVPMSELSFCDPTTGEDKTEQAKKLMREKAPELLQLMAQVRV 567
            VGLLDVDI GPSVPRMLGL GQEVHQS+ GWSPV+V+D LGVMSIGFMLP  D+A+IWRGP+K+GLIKQFLTDV+WG LDYL+IDTPPGTSDEH+S+V+Y++   +DGAVVVTTPQEVAMADVRKE+NFC+KTG+ VLG   +VENM+GL  P++  +F DP T  D T+   ++++ KAPELL    Q++V
Sbjct:  153 VGLLDVDITGPSVPRMLGLQGQEVHQSNEGWSPVYVDDNLGVMSIGFMLPNPDDAIIWRGPKKSGLIKQFLTDVHWGDLDYLIIDTPPGTSDEHISIVQYMKETNIDGAVVVTTPQEVAMADVRKELNFCKKTGVPVLGYDDVVENMAGLEQPLTACNFVDPATATDHTQHVLEVLKAKAPELLAYAVQLQV 344
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BLAST of mRNA_H-paniculata_contig15903.3422.1 vs. uniprot
Match: A4RRN3_OSTLU (Cytosolic Fe-S cluster assembly factor NBP35 n=2 Tax=Ostreococcus sp. 'lucimarinus' TaxID=242159 RepID=A4RRN3_OSTLU)

HSP 1 Score: 272 bits (696), Expect = 1.400e-88
Identity = 128/180 (71.11%), Postives = 153/180 (85.00%), Query Frame = 1 
Query:    1 VGLLDVDICGPSVPRMLGLTGQEVHQSSSGWSPVWVNDGLGVMSIGFMLPQQDNAVIWRGPRKNGLIKQFLTDVNWGQLDYLVIDTPPGTSDEHMSVVKYLEGCGVDGAVVVTTPQEVAMADVRKEINFCRKTGLKVLGIVENMSGLTVPMSELSFCDPTTGEDKTEQAKKLMREKAPEL 540
            VGLLDVDICGPSVP M G    EVH+S+SGWSPV+V + L VMSIGFMLP +D+AVIWRGPRKNGLIKQFL D  WG+LDYL++D PPGTSDEH+SVV+YL+  GVDGA+VVTTPQEVA+ADVRKE+NFC+KTG+KVLG+VENMSGL VPM E+SF +  TG D+T + ++L+   APEL
Sbjct:   95 VGLLDVDICGPSVPTMCGDAEAEVHKSNSGWSPVYVEENLAVMSIGFMLPNRDDAVIWRGPRKNGLIKQFLADTEWGELDYLIVDAPPGTSDEHLSVVQYLKEAGVDGALVVTTPQEVAVADVRKELNFCKKTGIKVLGVVENMSGLRVPMREMSFVNEDTGADETSRVRELLATHAPEL 274
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BLAST of mRNA_H-paniculata_contig15903.3422.1 vs. uniprot
Match: H3GAM5_PHYRM (Cytosolic Fe-S cluster assembly factor NUBP1 homolog n=20 Tax=Phytophthora TaxID=4783 RepID=H3GAM5_PHYRM)

HSP 1 Score: 272 bits (696), Expect = 2.100e-88
Identity = 131/189 (69.31%), Postives = 159/189 (84.13%), Query Frame = 1 
Query:    1 VGLLDVDICGPSVPRMLGLTGQEVHQSSSGWSPVWVNDGLGVMSIGFMLPQQDNAVIWRGPRKNGLIKQFLTDVNWGQLDYLVIDTPPGTSDEHMSVVKYLEGCGVDGAVVVTTPQEVAMADVRKEINFCRKTGLKVLGIVENMSGLTVPMSELSFCDPTTGEDKTEQAKKLMREKAPELLQLMAQVRV 567
            VGLLDVDI GPSVPRMLGL GQEVHQS++GWSPV+V+D LGVMSIGFMLP  D+A+IWRGP+K+G+IKQFL DV WG LDYL+IDTPPGTSDEH+S+V+Y++   +DGAVVVTTPQEVA++DVRKE+NFCRKT + VLG+VENMSG+  P+SE+ F     G D+T    KL++EKAPELLQ   Q+ V
Sbjct:   91 VGLLDVDITGPSVPRMLGLLGQEVHQSAAGWSPVYVDDNLGVMSIGFMLPDADDAIIWRGPKKSGIIKQFLVDVQWGDLDYLIIDTPPGTSDEHISIVQYMKEADLDGAVVVTTPQEVALSDVRKELNFCRKTNINVLGVVENMSGVQRPLSEVKFVG-ADGNDETAAFMKLLQEKAPELLQHSVQMEV 278
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig15903.3422.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JII2_9PHAE2.630e-11486.24Cytosolic Fe-S cluster assembly factor NUBP1 homol... [more]
A0A6V1SZ98_HETAK1.170e-9775.14Cytosolic Fe-S cluster assembly factor NUBP1 homol... [more]
A0A7S2UWA7_9STRA1.880e-9475.41Cytosolic Fe-S cluster assembly factor NUBP1 homol... [more]
A0A7S1XNV4_9STRA1.330e-9170.90Cytosolic Fe-S cluster assembly factor NUBP1 homol... [more]
T0RQD5_SAPDV1.590e-9169.31Cytosolic Fe-S cluster assembly factor NUBP1 homol... [more]
W7TWQ3_9STRA8.260e-9167.00Cytosolic Fe-S cluster assembly factor NUBP1 homol... [more]
A0A3R6VDL5_9STRA9.110e-9068.25Cytosolic Fe-S cluster assembly factor NUBP1 homol... [more]
A0A485KZS6_9STRA1.070e-8868.23Cytosolic Fe-S cluster assembly factor NUBP1 homol... [more]
A4RRN3_OSTLU1.400e-8871.11Cytosolic Fe-S cluster assembly factor NBP35 n=2 T... [more]
H3GAM5_PHYRM2.100e-8869.31Cytosolic Fe-S cluster assembly factor NUBP1 homol... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig15903contigH-paniculata_contig15903:3194..5919 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score340.9
Seed ortholog evalue3.8e-91
Seed eggNOG ortholog2880.D8LDZ4
Preferred nameNBP35
KEGG rclassRC00028,RC00049,RC00077
KEGG koko:K03593,ko:K12316
KEGG ReactionR00028,R00801,R00802
KEGG Pathwayko00052,ko00500,ko01100,ko04142,map00052,map00500,map01100,map04142
Hectar predicted targeting categoryother localisation
GOsGO:0000166,GO:0001558,GO:0002097,GO:0002098,GO:0003674,GO:0003824,GO:0005488,GO:0005506,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005815,GO:0005829,GO:0005856,GO:0005886,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006790,GO:0006807,GO:0006873,GO:0006875,GO:0006879,GO:0008033,GO:0008104,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0010564,GO:0010639,GO:0010824,GO:0010826,GO:0010948,GO:0015630,GO:0016020,GO:0016043,GO:0016070,GO:0016226,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0019725,GO:0022607,GO:0030003,GO:0031163,GO:0031344,GO:0032886,GO:0032991,GO:0033036,GO:0033043,GO:0034470,GO:0034613,GO:0034641,GO:0034660,GO:0036094,GO:0040008,GO:0042592,GO:0042802,GO:0042803,GO:0043167,GO:0043169,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043412,GO:0044085,GO:0044087,GO:0044237,GO:0044238,GO:0044422,GO:0044424,GO:0044430,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0044572,GO:0045786,GO:0046483,GO:0046605,GO:0046606,GO:0046872,GO:0046914,GO:0046916,GO:0046983,GO:0048037,GO:0048519,GO:0048523,GO:0048878,GO:0050789,GO:0050794,GO:0050801,GO:0051128,GO:0051129,GO:0051179,GO:0051186,GO:0051493,GO:0051494,GO:0051536,GO:0051539,GO:0051540,GO:0051640,GO:0051641,GO:0051642,GO:0051726,GO:0055065,GO:0055072,GO:0055076,GO:0055080,GO:0055082,GO:0060491,GO:0061842,GO:0065007,GO:0065008,GO:0070507,GO:0070727,GO:0071704,GO:0071840,GO:0071944,GO:0072697,GO:0090304,GO:0097159,GO:0098771,GO:0120032,GO:0120035,GO:1901265,GO:1901360,GO:1901363,GO:1902017,GO:1902115,GO:1902494,GO:1902855,GO:1904564,GO:1904949,GO:1990229,GO:1990778
EggNOG free text desc.Component of the cytosolic iron-sulfur (Fe S) protein assembly (CIA) machinery. Required for maturation of extramitochondrial Fe-S proteins. The NBP35-CFD1 heterotetramer forms a Fe-S scaffold complex, mediating the de novo assembly of an Fe-S cluster and its transfer to target apoproteins
EggNOG OGsCOG0489@1,KOG3022@2759
Ec32 ortholog descriptionMrp/NBP35 ATP-binding protein
Ec32 orthologEc-23_003200.1
EC3.2.1.20
COG Functional cat.D
CAZyGH31
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko03029,ko03036,ko04147
Exons4
Model size567
Cds size567
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig15903.3422.1prot_H-paniculata_contig15903.3422.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig15903 3194..5919 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929269.641778-CDS-H-paniculata_contig15903:3193..33161622929269.641778-CDS-H-paniculata_contig15903:3193..3316Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig15903 3194..3316 -
1691480795.0196671-CDS-H-paniculata_contig15903:3193..33161691480795.0196671-CDS-H-paniculata_contig15903:3193..3316Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig15903 3194..3316 -
1622929269.6553714-CDS-H-paniculata_contig15903:4110..42061622929269.6553714-CDS-H-paniculata_contig15903:4110..4206Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig15903 4111..4206 -
1691480795.0320606-CDS-H-paniculata_contig15903:4110..42061691480795.0320606-CDS-H-paniculata_contig15903:4110..4206Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig15903 4111..4206 -
1622929269.6723995-CDS-H-paniculata_contig15903:4546..46781622929269.6723995-CDS-H-paniculata_contig15903:4546..4678Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig15903 4547..4678 -
1691480795.041402-CDS-H-paniculata_contig15903:4546..46781691480795.041402-CDS-H-paniculata_contig15903:4546..4678Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig15903 4547..4678 -
1622929269.7107773-CDS-H-paniculata_contig15903:5703..59191622929269.7107773-CDS-H-paniculata_contig15903:5703..5919Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig15903 5704..5919 -
1691480795.0508657-CDS-H-paniculata_contig15903:5703..59191691480795.0508657-CDS-H-paniculata_contig15903:5703..5919Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig15903 5704..5919 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig15903.3422.1

>prot_H-paniculata_contig15903.3422.1 ID=prot_H-paniculata_contig15903.3422.1|Name=mRNA_H-paniculata_contig15903.3422.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=189bp
VGLLDVDICGPSVPRMLGLTGQEVHQSSSGWSPVWVNDGLGVMSIGFMLP
QQDNAVIWRGPRKNGLIKQFLTDVNWGQLDYLVIDTPPGTSDEHMSVVKY
LEGCGVDGAVVVTTPQEVAMADVRKEINFCRKTGLKVLGIVENMSGLTVP
MSELSFCDPTTGEDKTEQAKKLMREKAPELLQLMAQVRV
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mRNA from alignment at H-paniculata_contig15903:3194..5919-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig15903.3422.1 ID=mRNA_H-paniculata_contig15903.3422.1|Name=mRNA_H-paniculata_contig15903.3422.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=2726bp|location=Sequence derived from alignment at H-paniculata_contig15903:3194..5919- (Halopteris paniculata Hal_grac_a_UBK monoicous)
GTTGGCTTACTCGATGTTGACATATGCGGTCCAAGCGTGCCGCGAATGCT
GGGCTTGACAGGGCAAGAGGTACACCAGAGCTCGTCCGGATGGTCTCCAG
TATGGGTAAACGACGGATTGGGCGTAATGTCGATCGGTTTCATGCTGCCG
CAGCAAGATAATGCCGTTATCTGGAGAGGTCCTCGCAAGAACGGGCTAAT
CAAGCAGTTTTTAACGGTACGTGTGATATGGACTTGGGAATAACGGAAAT
TTTCTTCAACGAGTAAAATTGAAGGCTGGATAGAGTATATATGTCAGACA
TGGCAAACGATGTGTAGGGTGCGGTTCTCGTTCAAACGCTTTCTGGATTC
TTTGAGAACTGAACCTTGTGTAACCAAAATATAGATTCCTAACCACCAGT
CATGGAACAATGACGAAACATCTGCAGAATGCGGACCAGCAAGACGAGGC
TGTGCGCACAAGTATAGAATACCAGAATTGCCTCGTATCGGCCGGGCTGT
TCAAGCTGGACACAGCTGGACGGCTGATTAAACAGTGTACCCATGCGAGA
GCCAGGGGCTCCTACCAGGGGGGATCCCACCAAAGAATCGGAAATCTATC
TCACAGCTTTCCTTTTTTCAAGTAATACATACAATGTACAGACTTTGACA
CTGACCGGCCATATCCTTATAATGTAGTATGGTAACGCAATTGTCGTGAT
CGTCGTTTCGAAACAGTTTTTTTGCTCCGTAAATCAATGAACTCCTGAAA
AACAAATGTTCATTCAAGCGTAGGCAGCCACTGCTAGCGCAGCGAGCACG
GGTTTTCGTTACGCAAGCCCCCGCCACAAGCGAGCTAGTCCGTGGGTCTA
GTACAAGTGCGAACTGCACGGACCTAGCCGTGACTCTACTAGTTGTAAAA
AAATGCTGAAATTTTCAACGTTGGCATGTAGGCTATTTGCATTCAATTCG
CGAAAATCTGGTTCGGATGTATGAACGCTTGCACTGGGCTGTCTCTCTGT
ATGTGTTTCTGCTTGAACAGCGCTGGCTCCCCATTCCCGAATTTATTTCA
TAAGCGTCATTTCCCCCTGTTTTTCGATGTCGGAATTAGGTCTAGATTAA
ATTCGAATGGGCACTAAAACGTTAATGCCCGAAGAGACGACACTTAGAAT
TCTTTCTGGATTCAACCCGAATATTTCGTGTCGCTCACCCCCTCTCATTG
TCATTACCGCGTTTGATTTCTTGGTTGTTTGGGGCCGGCAGGACGTGAAT
TGGGGACAGCTCGATTACCTTGTAATTGACACACCGCCGGGTACTAGCGA
TGAACACATGTCCGTGGTGAAATACCTGGAGGGGTGCGGCGTGGACGGAG
CCGTAGTGGTGACAACTCCGCAGGTACTGAGTGTACACGCGTCAGCGTAA
CGTTCTCGGACGCTTTCATAAAGCCGCTCCCCCTACGCTGGCTGGAGCGT
TAGTAGATTGCATTACATGTGCTTTCGCACGTTTGAATGCTACTTGCTCC
GGAGGGATACTTTCTCGTGCTGCTTATCATCGCCAAGCTGTGATCATCTT
TGTGTAGGAGAGATGTTGATTATGATGTTTTTCGCTGCCCTGTTCGTGCA
CCTGTAGAGACCTCTACCACCGCAGCCGCTGTAGCTAACTTGGTGTTAAG
CATGTGATAAATACATGCTGCTTTATTTGCACATCCGGCGAATCGACAAC
GTGTGTACTGAAGGAGGTGGCGATGGCGGACGTGCGCAAGGAGATCAACT
TCTGCCGAAAAACAGGGCTCAAGGTGCTGGGGATTGTGGAGAATATGAGT
GGTCTTACGGTGAGCCTTTGTTTCAATTAAGCATTGTTTGGTTTTCGTTT
AGTTTGTCGATTTCCGATACGCGAAGTGTGCCCCTCCAGTCGGCGGCTGA
CTCAAATGAATGTGAAACCTGCAAGAGCGAAGGTATCAGTGACAGCGATG
GGACTTTCTTTCAAGTAGACCTGATGTCGATGAGCTTTTCAGTATCGTAG
CCATCGACTAAAATCAGTTCCTAAAAATACAACGTAGGTTTGCTTGAGTG
TTGTGCACGGTAGATCTTTCACCTTGACGCGAGTGTTGAGACCTTCACGT
GCCAGTTATCAACTCAATGACGGTGTTGCTTCGCAGATTATATCTCTATT
CAACCAGCGTGCGTGCTTCTGCTGACACTGTAAGCACATGAAACGCCCAT
GCCGTGGTTCTCAGATGCCCCACCTGAATGTATTCCCTTTCACTGCCTTG
TGTTTTCGAGGGGGCATCCTTGTTTCCAGCGTGCCATTTTGTCGTATCCT
GTACAGGGGGTATCCCGAAACAAGGCGGATCATCTAAAATAGCATGTCAT
ACAAACAAAGTCCCGTACATTTATTACGTAATGAGGTACTTTTAGTGAGG
TATATTTCGATTTATGGCGTTTGTGTGTTGCTTGTCATGTACCTGCCTGT
TAAATTGGGGTAACAACTGTTGTCGGAAAATGAAACAGTGGGATGTCGCA
ATGACCTGTATACCCAGTATGACCGCTCTGTTCGGGGTGACTATCTCTTA
ACCTTCTTTTGGACCGTTGCTGGCGCTGGAAAATTGTGTTTGGAATGTGA
TAGGTACCGATGTCTGAGTTATCGTTCTGTGACCCGACGACCGGAGAAGA
CAAGACCGAACAGGCGAAGAAACTTATGCGAGAAAAGGCTCCGGAACTGC
TGCAGCTCATGGCACAGGTGCGCGTG
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Coding sequence (CDS) from alignment at H-paniculata_contig15903:3194..5919-

>mRNA_H-paniculata_contig15903.3422.1 ID=mRNA_H-paniculata_contig15903.3422.1|Name=mRNA_H-paniculata_contig15903.3422.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1134bp|location=Sequence derived from alignment at H-paniculata_contig15903:3194..5919- (Halopteris paniculata Hal_grac_a_UBK monoicous)
GTTGGCTTACTCGATGTTGACATATGCGGTCCAAGCGTGCCGCGAATGCT
GGGCTTGACAGGGCAAGAGGTACACCAGAGCTCGTCCGGATGGTCTCCAG
TATGGGTAAACGACGGATTGGGCGTAATGTCGATCGGTTTCATGCTGCCG
CAGCAAGATAATGCCGTTATCTGGAGAGGTCCTCGCAAGAACGGGCTAAT
CAAGCAGTTTTTAACGGTTGGCTTACTCGATGTTGACATATGCGGTCCAA
GCGTGCCGCGAATGCTGGGCTTGACAGGGCAAGAGGTACACCAGAGCTCG
TCCGGATGGTCTCCAGTATGGGTAAACGACGGATTGGGCGTAATGTCGAT
CGGTTTCATGCTGCCGCAGCAAGATAATGCCGTTATCTGGAGAGGTCCTC
GCAAGAACGGGCTAATCAAGCAGTTTTTAACGGACGTGAATTGGGGACAG
CTCGATTACCTTGTAATTGACACACCGCCGGGTACTAGCGATGAACACAT
GTCCGTGGTGAAATACCTGGAGGGGTGCGGCGTGGACGGAGCCGTAGTGG
TGACAACTCCGCAGGACGTGAATTGGGGACAGCTCGATTACCTTGTAATT
GACACACCGCCGGGTACTAGCGATGAACACATGTCCGTGGTGAAATACCT
GGAGGGGTGCGGCGTGGACGGAGCCGTAGTGGTGACAACTCCGCAGGAGG
TGGCGATGGCGGACGTGCGCAAGGAGATCAACTTCTGCCGAAAAACAGGG
CTCAAGGTGCTGGGGATTGTGGAGAATATGAGTGGTCTTACGGAGGTGGC
GATGGCGGACGTGCGCAAGGAGATCAACTTCTGCCGAAAAACAGGGCTCA
AGGTGCTGGGGATTGTGGAGAATATGAGTGGTCTTACGGTACCGATGTCT
GAGTTATCGTTCTGTGACCCGACGACCGGAGAAGACAAGACCGAACAGGC
GAAGAAACTTATGCGAGAAAAGGCTCCGGAACTGCTGCAGCTCATGGCAC
AGGTGCGCGTGGTACCGATGTCTGAGTTATCGTTCTGTGACCCGACGACC
GGAGAAGACAAGACCGAACAGGCGAAGAAACTTATGCGAGAAAAGGCTCC
GGAACTGCTGCAGCTCATGGCACAGGTGCGCGTG
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