mRNA_H-paniculata_contig1590.3419.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig1590.3419.1 vs. uniprot
Match: A0A835YXX8_9STRA (Sedoheptulose-bisphosphatase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YXX8_9STRA) HSP 1 Score: 92.0 bits (227), Expect = 2.490e-18 Identity = 59/129 (45.74%), Postives = 75/129 (58.14%), Query Frame = 1
Query: 43 LTAILEGYAQDMDVGLVSVLSAIGKASGTIGQHLKSANGGAKAGTANKFGDDQLDVDLAADKIIFDELKRCGVVAVAASEENPVETPIGDPSHRYAHS---G*RSIEVAADCGA*RGEHEHIWHGGTFQ 420
L IL+ YA D+D LV LSAI A I +HL +A+G AKAG++N +GDDQLD+DL AD IIF+E+K VAVAASEE P E +G + A G I+ G+ G +WHG Q
Sbjct: 14 LDTILKDYAPDIDPKLVKTLSAIATACEGISRHLWTADGEAKAGSSNAYGDDQLDIDLYADHIIFEEMKASKCVAVAASEEKPQELEMGGEGYSVAFDPLDGSSIIDANFAVGSIFG----VWHGRGLQ 138
BLAST of mRNA_H-paniculata_contig1590.3419.1 vs. uniprot
Match: A0A7S2UUN7_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UUN7_9STRA) HSP 1 Score: 86.7 bits (213), Expect = 2.540e-16 Identity = 47/99 (47.47%), Postives = 66/99 (66.67%), Query Frame = 1
Query: 13 LMTRFEYQQGLTAILEGYAQDMDVGLVSVLSAIGKASGTIGQHLKSANGGAKAGTANKFGDDQLDVDLAADKIIFDELKRCGVVAVAASEENPVETPIG 309
L+ E + LT L+ YA ++ L SVLS + +A+G I + L+ +AGT N+FGD+QL+VD+A DKI+FD LK CG V+VA+SEE P ET +G
Sbjct: 13 LIVLIEAKMDLTPTLQQYAPNVCPKLASVLSRLLEATGDISKKLREGTSHEQAGTQNRFGDNQLEVDIATDKIVFDALKSCGHVSVASSEETPEETDLG 111
BLAST of mRNA_H-paniculata_contig1590.3419.1 vs. uniprot
Match: D7FM01_ECTSI (Sedoheptulose-bisphosphatase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FM01_ECTSI) HSP 1 Score: 82.0 bits (201), Expect = 6.180e-15 Identity = 42/63 (66.67%), Postives = 46/63 (73.02%), Query Frame = 1
Query: 151 ANGGAKAGTANKFGDDQLDVDLAADKIIFDELKRCGVVAVAASEENPVETPIGDPSHRYAHSG 339
ANG +KAGT N FGD+QLDVDLAAD+IIF E CG VAVAASEE PVE P+G S R G
Sbjct: 7 ANGASKAGTDNAFGDEQLDVDLAADEIIFQEFMSCGAVAVAASEEKPVEAPMGGSSERLYSVG 69
BLAST of mRNA_H-paniculata_contig1590.3419.1 vs. uniprot
Match: A0A0D2X574_CAPO3 (Sedoheptulose-bisphosphatase n=2 Tax=Capsaspora owczarzaki (strain ATCC 30864) TaxID=595528 RepID=A0A0D2X574_CAPO3) HSP 1 Score: 69.7 bits (169), Expect = 2.460e-10 Identity = 39/76 (51.32%), Postives = 51/76 (67.11%), Query Frame = 1
Query: 79 DVGLVSVLSAIGKASGTIGQHLKSANGGAKAGTANKFGDDQLDVDLAADKIIFDELKRCGVVAVAASEENPVETPI 306
D L + +AI A+ I L+SA+ G KAGT N FGD QL+VD+ ADKI+F+ L+ G V+V ASEENPV P+
Sbjct: 19 DARLAATFNAIADATAQIADTLRSASVG-KAGTTNVFGDHQLEVDVIADKIVFNALRDSGAVSVGASEENPVAVPL 93
BLAST of mRNA_H-paniculata_contig1590.3419.1 vs. uniprot
Match: K8YYP4_NANGC (Sedoheptulose-bisphosphatase n=3 Tax=Monodopsidaceae TaxID=425072 RepID=K8YYP4_NANGC) HSP 1 Score: 67.8 bits (164), Expect = 1.060e-9 Identity = 32/81 (39.51%), Postives = 52/81 (64.20%), Query Frame = 1
Query: 73 DMDVGLVSVLSAIGKASGTIGQHLKSANGGAKAGTANKFGDDQLDVDLAADKIIFDELKRCGVVAVAASEENPVETPIGDP 315
D+ L +L A+ +AS I L++ + K+G N FGD+QL +D+ ++I+F+EL+ CG+V +A+SEE P E +G P
Sbjct: 19 DLPADLEQLLGAVARASKRIADTLRTGDAHTKSGIENTFGDEQLHLDVVTNEIVFEELRACGLVHIASSEETPTEEDLGAP 99
BLAST of mRNA_H-paniculata_contig1590.3419.1 vs. uniprot
Match: A0A8H7KDP3_BIOOC (Uncharacterized protein n=1 Tax=Bionectria ochroleuca TaxID=29856 RepID=A0A8H7KDP3_BIOOC) HSP 1 Score: 66.6 bits (161), Expect = 2.790e-9 Identity = 39/81 (48.15%), Postives = 50/81 (61.73%), Query Frame = 1
Query: 94 SVLSAIGKASGTIGQHLKSANGGAKAGTANKFGDDQLDVDLAADKIIFDELKRCGVVAVAASEENPVETPIGDPSHRYAHS 336
SVL A+ A I Q L+ + + AGTAN FGDDQL+VD+AA+ +I D L RC V A SEE+PVE P+ + HS
Sbjct: 32 SVLPALLDAVAAIAQTLRGYHSVSAAGTANPFGDDQLNVDVAAENLIRDALARCPSVVTATSEEDPVEKPVQHLNGASQHS 112
BLAST of mRNA_H-paniculata_contig1590.3419.1 vs. uniprot
Match: A0A7S3EGC8_9RHOD (Fructose-bisphosphatase n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S3EGC8_9RHOD) HSP 1 Score: 65.9 bits (159), Expect = 4.180e-9 Identity = 39/96 (40.62%), Postives = 56/96 (58.33%), Query Frame = 1
Query: 43 LTAILEGYAQDMDVGLVSVLSAIGKASGTIGQHLKSANGGAKAGTANKFGDDQLDVDLAADKIIFDELKRCGVVAVAASEENPVETPIGDPSHRYA 330
++ LE +D L + I +A I ++S K T+N FGD+QL++D+ ADKI+FDEL+ GVVA A+SEE P E +GD S+ A
Sbjct: 1 MSTSLEDVLSPLDEDLRRCIEHIARACTQIADAVRSGRT-EKIATSNTFGDEQLEIDVFADKILFDELRASGVVATASSEEVPTEIRLGDGSYSVA 95
BLAST of mRNA_H-paniculata_contig1590.3419.1 vs. uniprot
Match: A0A0S3IV02_EUGAN (Fructose-bisphosphatase (Fragment) n=1 Tax=Euglenaria anabaena var. minor TaxID=216134 RepID=A0A0S3IV02_EUGAN) HSP 1 Score: 65.5 bits (158), Expect = 1.070e-8 Identity = 39/97 (40.21%), Postives = 59/97 (60.82%), Query Frame = 1
Query: 19 TRFEYQQGLTAILEGYAQDMDVGLVSVLSAIGKASGTIGQHLKSANGGAKAGTANKFGDDQLDVDLAADKIIFDELKRCGVVAVAASEENPVETPIG 309
T ++Q G+T A D L ++++ + ++ TI +K+A+ G A T N FGD+QL VD+ ADK++F+ LK CGV +A SEENPV +G
Sbjct: 94 TSGKFQMGMTLEEFMTASVPDSKLRTIMATLAESGRTIDHKVKTASCGGTACT-NVFGDEQLAVDMLADKVLFEGLKHCGVCEIACSEENPVPLEMG 189
BLAST of mRNA_H-paniculata_contig1590.3419.1 vs. uniprot
Match: A0A8J9RGB0_9CHLO (Sedoheptulose-1,7-bisphosphatase, chloroplastic n=1 Tax=Coccomyxa sp. Obi TaxID=2315456 RepID=A0A8J9RGB0_9CHLO) HSP 1 Score: 63.9 bits (154), Expect = 2.280e-8 Identity = 37/81 (45.68%), Postives = 48/81 (59.26%), Query Frame = 1
Query: 88 LVSVLSAIGKASGTIGQHLKSANGGAKAGTANKFGDDQLDVDLAADKIIFDELKRCGVVAVAASEENPVETPIGDPSHRYA 330
L +VLSAI I + L+S + GT N FGD QL+VD+AAD IIF+ LK+ VA A+SEE P E +G + A
Sbjct: 15 LGTVLSAIASGVDDIAELLRSGQTSGEVGTLNSFGDKQLEVDIAADDIIFNRLKQSCAVATASSEERPEEISLGGQGYAVA 95
BLAST of mRNA_H-paniculata_contig1590.3419.1 vs. uniprot
Match: A0A7S0G283_9RHOD (Hypothetical protein (Fragment) n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S0G283_9RHOD) HSP 1 Score: 62.8 bits (151), Expect = 2.310e-8 Identity = 30/55 (54.55%), Postives = 40/55 (72.73%), Query Frame = 1
Query: 166 KAGTANKFGDDQLDVDLAADKIIFDELKRCGVVAVAASEENPVETPIGDPSHRYA 330
K T+N FGD+QL++D+ ADKI+FDEL+ GVVA A+SEE P E +G S+ A
Sbjct: 29 KIATSNTFGDEQLEIDVFADKILFDELRASGVVATASSEEVPTENRLGGASYSVA 83 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig1590.3419.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig1590.3419.1 >prot_H-paniculata_contig1590.3419.1 ID=prot_H-paniculata_contig1590.3419.1|Name=mRNA_H-paniculata_contig1590.3419.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=113bp MHELMTRFEYQQGLTAILEGYAQDMDVGLVSVLSAIGKASGTIGQHLKSAback to top mRNA from alignment at H-paniculata_contig1590:2353..6477- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig1590.3419.1 ID=mRNA_H-paniculata_contig1590.3419.1|Name=mRNA_H-paniculata_contig1590.3419.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=4125bp|location=Sequence derived from alignment at H-paniculata_contig1590:2353..6477- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig1590:2353..6477- >mRNA_H-paniculata_contig1590.3419.1 ID=mRNA_H-paniculata_contig1590.3419.1|Name=mRNA_H-paniculata_contig1590.3419.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=678bp|location=Sequence derived from alignment at H-paniculata_contig1590:2353..6477- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |