mRNA_H-paniculata_contig159.3417.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig159.3417.1 vs. uniprot
Match: D7FJ06_ECTSI (Epimerase/dehydrogenase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJ06_ECTSI) HSP 1 Score: 355 bits (910), Expect = 2.490e-117 Identity = 190/258 (73.64%), Postives = 211/258 (81.78%), Query Frame = 1
Query: 628 CAFVIPTGARLGALGAKSRGDSGPSMKKLQMVYGKVFVAGGSKGVGRAVIDKLVEQGSEVVALVRREEVKAELEAITGVTAVVCDALDLKGVEGALDGCDAAITTLGGASRDGEEKRVDYVGNRNVIESAGILGITRLVLVTSVGCGSSREAISDEVYQNLEKALSAKTLAENMLLKYYTNSEWTIIRPGGLKSEPETGSAVLTEDTKIAGVVSRADVADLTVQVLNSPKTVRKILTAMDPAANSNYGSSQPIRVFEV 1401
CA+ TG + +S G L+M YGKVFVAGG+KGVGRAVIDKLV+QGSEVVALVRRE+ K ELEAI GV+AVVCDALDLKGVE LDGCDAAITTLGGA E KRVDY GNRNVIESAGILGITR+V+VTSVGCGSSREAISD+VYQ LEKAL AKTLAENMLLKYYTNSEWTIIRPGGLKS+ TG+A+LTEDTK AGV++RADVADL VQ LNSP TVRKILTA+DPA S+Y S++ F +
Sbjct: 24 CAWNKVTGTARSTISGQSTG--------LRMAYGKVFVAGGAKGVGRAVIDKLVDQGSEVVALVRREDAKDELEAIKGVSAVVCDALDLKGVEAVLDGCDAAITTLGGAPEGDESKRVDYAGNRNVIESAGILGITRVVMVTSVGCGSSREAISDQVYQVLEKALKAKTLAENMLLKYYTNSEWTIIRPGGLKSDAATGTAILTEDTKAAGVINRADVADLAVQALNSPSTVRKILTAVDPAVQSSYDSAEKPAAFAL 273
BLAST of mRNA_H-paniculata_contig159.3417.1 vs. uniprot
Match: A0A835Z825_9STRA (Epimerase/dehydrogenase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z825_9STRA) HSP 1 Score: 284 bits (727), Expect = 6.490e-90 Identity = 149/234 (63.68%), Postives = 182/234 (77.78%), Query Frame = 1
Query: 700 SMKKLQMVYGKVFVAGGSKGVGRAVIDKLVEQGSEVVALVRREEVKAELEAITGVTAVVCDALDLKGVEGALDGCDAAITTLGGASRDGEEKRVDYVGNRNVIESAGILGITRLVLVTSVGCGSSREAISDEVYQNLEKALSAKTLAENMLLKYYTNSEWTIIRPGGLKSEPETGSAVLTEDTKIAGVVSRADVADLTVQVLNSPKTVRKILTAMDPAANSNYGSSQPIRVFEV 1401
S L M Y KVFVAGGS GVGR V+++LV +G +VVA+VRRE+ EL AI GVTAV+ DALDLKGVEGALDGCDAAITTLGG+S E RVDY GNRNVIESAGILG+TR++LVTSVGCG SR AISD+VY +LEKAL AKT AE ML KYYTN+ WTIIRPGGL++ TG A+LTE+ IAG++ RADVAD+ V+ L++ T +K+ TA+DP+ S++G + F +
Sbjct: 32 SSSSLSMAYNKVFVAGGSSGVGREVVNQLVSKGKQVVAIVRREDALEELNAIEGVTAVMVDALDLKGVEGALDGCDAAITTLGGSSG---ENRVDYEGNRNVIESAGILGVTRVILVTSVGCGDSRGAISDQVYTSLEKALVAKTKAEKMLQKYYTNAFWTIIRPGGLQTAEGTGKAILTENKTIAGIIRRADVADVVVRALDNDGTHKKVFTAVDPSIPSSFGDASKAEAFPL 262
BLAST of mRNA_H-paniculata_contig159.3417.1 vs. uniprot
Match: A0A7S3L6R6_9STRA (Hypothetical protein n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3L6R6_9STRA) HSP 1 Score: 280 bits (716), Expect = 3.010e-88 Identity = 147/235 (62.55%), Postives = 179/235 (76.17%), Query Frame = 1
Query: 697 PSMKKLQMVYGKVFVAGGSKGVGRAVIDKLVEQGSEVVALVRREEVKAELEAITGVTAVVCDALDLKGVEGALDGCDAAITTLGGASRDGEEKRVDYVGNRNVIESAGILGITRLVLVTSVGCGSSREAISDEVYQNLEKALSAKTLAENMLLKYYTNSEWTIIRPGGLKSEPETGSAVLTEDTKIAGVVSRADVADLTVQVLNSPKTVRKILTAMDPAANSNYGSSQPIRVFEV 1401
PS L Y VFVAGGSKGVGR VIDKL+EQGS+VVALVR+EEV A+L +I GVTA+V DA D K VE A+DGCDAAITTLGG+++D R+DY GN NVIESAGILG+ R++LVTSVGCGSS+EA + V++ L++ L AK AEN+L+KYYTNS W+IIRPGGLKSEP TG+A+LTED K G + R DVA L V+ L SPKT RKILTA+DP+ S + + F +
Sbjct: 30 PSNTALFATYKNVFVAGGSKGVGRLVIDKLLEQGSKVVALVRKEEVAADLNSIEGVTAIVGDAFDQKTVENAMDGCDAAITTLGGSTQD-TGARIDYAGNSNVIESAGILGVQRIILVTSVGCGSSKEAAPEAVFEALKEVLLAKEKAENVLIKYYTNSNWSIIRPGGLKSEPATGNAILTEDNKTIGTIHREDVASLVVRCLESPKTERKILTAIDPSIESAVATGAEVEAFAL 263
BLAST of mRNA_H-paniculata_contig159.3417.1 vs. uniprot
Match: B7FVE3_PHATC (Predicted protein n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7FVE3_PHATC) HSP 1 Score: 271 bits (693), Expect = 9.710e-85 Identity = 140/226 (61.95%), Postives = 173/226 (76.55%), Query Frame = 1
Query: 724 YGKVFVAGGSKGVGRAVIDKLVEQGSEVVALVRREEVKAELEAITGVTAVVCDALDLKGVEGALDGCDAAITTLGGASRDGEEKRVDYVGNRNVIESAGILGITRLVLVTSVGCGSSREAISDEVYQNLEKALSAKTLAENMLLKYYTNSEWTIIRPGGLKSEPETGSAVLTEDTKIAGVVSRADVADLTVQVLNSPKTVRKILTAMDPAANSNYGSSQPIRVFEV 1401
Y KVFVAGG++GVGR ++D+L+ QGSEVVALVR E+ EL AI GVTA+ DA + K VE A+DGCDAAITTLGGA+ DG KRVDY GN NVIESAGILG+TR++LVTSVGCGSS+EA V++ L++ L+AK AEN+L+KYYTN WTIIRPGGLKSEP TG A+LTEDT+ G + R DVA L ++ LNS T RK+LTA+DP+ +S + + F V
Sbjct: 43 YKKVFVAGGTRGVGRCIVDQLLGQGSEVVALVRSEDALKELNAIEGVTAIRGDAFEQKAVENAMDGCDAAITTLGGATSDGG-KRVDYDGNSNVIESAGILGVTRVILVTSVGCGSSKEAAPPNVFEALKEVLTAKEKAENVLIKYYTNMNWTIIRPGGLKSEPATGKAILTEDTRAIGTIHREDVAALAIKALNSSNTERKVLTAIDPSIDSAVSDGKQVEAFAV 267
BLAST of mRNA_H-paniculata_contig159.3417.1 vs. uniprot
Match: A0A7S2UDM5_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UDM5_9STRA) HSP 1 Score: 267 bits (683), Expect = 4.680e-83 Identity = 143/249 (57.43%), Postives = 178/249 (71.49%), Query Frame = 1
Query: 628 CAFVIPTGARLGALGAKSRGDSGPSMKKLQ----MVYGKVFVAGGSKGVGRAVIDKLVEQGSEVVALVRREEVKAELEAITGVTAVVCDALDLKGVEGALDGCDAAITTLGGASRDGEEKRVDYVGNRNVIESAGILGITRLVLVTSVGCGSSREAISDEVYQNLEKALSAKTLAENMLLKYYTNSEWTIIRPGGLKSEPETGSAVLTEDTKIAGVVSRADVADLTVQVLNSPKTVRKILTAMDPAANS 1362
C+ +P + A S S S+ ++ Y KVFVAGGSKGVGR V+DKLV G+ VVALVR EE AEL A+ GVTAV+ DA D K VEGA+DGCDAA++TLGG + + ++RVDY GN NVIE+AGILG+TR+VL+TS+GCGSS+EA V++ L+ LSAK AEN+L+KYYTN+ WTIIRPGGLKSEP TG A+LTED G + R DVA L +Q L SPKT +KIL+A+DP S
Sbjct: 17 CSAFVPASTFVSRTTASSAKKSYSSLYMVEGQGGQTYNKVFVAGGSKGVGRLVVDKLVGSGTGVVALVRSEEAAAELNALDGVTAVIGDAFDYKAVEGAMDGCDAAMSTLGGGTVEEGKQRVDYEGNSNVIEAAGILGVTRVVLITSIGCGSSKEAAPPSVFEVLKDVLSAKERAENILIKYYTNTNWTIIRPGGLKSEPATGKAILTEDNMAIGSIHREDVAALAIQALTSPKTKQKILSAVDPEITS 265
BLAST of mRNA_H-paniculata_contig159.3417.1 vs. uniprot
Match: A0A7S0AIJ9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Minutocellus polymorphus TaxID=265543 RepID=A0A7S0AIJ9_9STRA) HSP 1 Score: 266 bits (679), Expect = 1.690e-82 Identity = 144/236 (61.02%), Postives = 176/236 (74.58%), Query Frame = 1
Query: 664 ALGAKSRGDSGPSMKKLQMVYGKVFVAGGSKGVGRAVIDKLVEQGSEVVALVRREEVKAELEAITGVTAVVCDALDLKGVEGALDGCDAAITTLG-GASRDGEE-KRVDYVGNRNVIESAGILGITRLVLVTSVGCGSSREAISDEVYQNLEKALSAKTLAENMLLKYYTNSEWTIIRPGGLKSEPETGSAVLTEDTKIAGVVSRADVADLTVQVLNSPKTVRKILTAMDPAANSN 1365
A G + GD+ P+ K Y KVFVAGGS+GVGRAV+D L+ GSEVVALVR +E +AEL A+ GVT DA D K VEGA+DGCDAAITT+G G GE KRVDYVGN NVIE+AGILG+TR+VLVTS+GCGSS+EA V++ L+ L+AK AEN+L+KYYTN WTI+RPGGLKSEP TG+A+LTE+ G + R DVADL VQ LNS T RKIL+A+DP +++
Sbjct: 42 ATGLRMAGDAAPASK-----YSKVFVAGGSRGVGRAVVDGLLSAGSEVVALVRTDEAEAELSALDGVTVARGDAFDYKAVEGAMDGCDAAITTMGQGTDPVGENGKRVDYVGNNNVIEAAGILGVTRVVLVTSIGCGSSKEAAPPSVFEVLKDVLAAKERAENVLIKYYTNMNWTIVRPGGLKSEPATGTAILTENNLAIGSIHREDVADLVVQALNSGNTERKILSAVDPEISAS 272
BLAST of mRNA_H-paniculata_contig159.3417.1 vs. uniprot
Match: B8C036_THAPS (NAD(P)-bd_dom domain-containing protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C036_THAPS) HSP 1 Score: 257 bits (656), Expect = 4.520e-79 Identity = 137/214 (64.02%), Postives = 161/214 (75.23%), Query Frame = 1
Query: 724 YGKVFVAGGSKGVGRAVIDKLVEQGSEVVALVRREEVKAELEAITGVTAVVCDALDLKGVEGALDGCDAAITTLGGASRDGE-EKRVDYVGNRNVIESAGILGITRLVLVTSVGCGSSREAISDEVYQNLEKALSAKTLAENMLLKYYTNSEWTIIRPGGLKSEPETGSAVLTEDTKIAGVVSRADVADLTVQVLNSPKTVRKILTAMDPAANS 1362
Y KVFVAGGSKGVGR V+DKLV G+EVVALVR +E EL A+ GVTA+ DA+D K VEGA+DGCDAAITTLGG E EK VDYVGN NVIE+AGILG+TR+VLVTS+GCGSS+EA VY+ L+ L K AE +L +YYTN WTI+RPGGL SEP TG AVLTEDT G + R DVADL V+ L+S T +KIL+A+DP+ S
Sbjct: 48 YKKVFVAGGSKGVGRLVVDKLVSNGAEVVALVRSDEAVDELSALDGVTAIKGDAMDYKTVEGAMDGCDAAITTLGGGHNVAEGEKYVDYVGNNNVIEAAGILGVTRVVLVTSIGCGSSKEATPPSVYEVLKDVLVQKEKAEKVLTRYYTNMNWTIVRPGGLVSEPPTGKAVLTEDTMAIGSIHRGDVADLVVKALSSKNTEKKILSAVDPSIES 261
BLAST of mRNA_H-paniculata_contig159.3417.1 vs. uniprot
Match: A0A6U3NUE1_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6U3NUE1_9STRA) HSP 1 Score: 257 bits (656), Expect = 4.820e-79 Identity = 132/213 (61.97%), Postives = 163/213 (76.53%), Query Frame = 1
Query: 724 YGKVFVAGGSKGVGRAVIDKLVEQGSEVVALVRREEVKAELEAITGVTAVVCDALDLKGVEGALDGCDAAITTLGGASRDGEEKRVDYVGNRNVIESAGILGITRLVLVTSVGCGSSREAISDEVYQNLEKALSAKTLAENMLLKYYTNSEWTIIRPGGLKSEPETGSAVLTEDTKIAGVVSRADVADLTVQVLNSPKTVRKILTAMDPAANS 1362
Y KVFVAGGSKGVGR ++DKL+E GSEVVALVR +E EL A+ GVTA++ DA + K VEGA+DGCDAAITTLG + + KRVDY GN NVIE+AGILG+TR++L+TS+GCGSS+EA V++ L+ L+AK AEN+L+KYYTN WTIIRPGGLKSEP TG A+LTED G + R DVA L V+ L S KT RK+L+A+D + S
Sbjct: 51 YKKVFVAGGSKGVGRHIVDKLIEDGSEVVALVRSQEAIDELSALEGVTAILGDAFEYKNVEGAMDGCDAAITTLGQGTAGEDGKRVDYEGNSNVIEAAGILGVTRVILITSIGCGSSKEAAPPSVFEVLKDVLAAKERAENVLIKYYTNMNWTIIRPGGLKSEPGTGEAILTEDAMAIGSIHREDVAALAVKALTSSKTERKVLSAVDQSIPS 263
BLAST of mRNA_H-paniculata_contig159.3417.1 vs. uniprot
Match: A0A7S2HK64_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2HK64_9STRA) HSP 1 Score: 256 bits (654), Expect = 1.060e-78 Identity = 132/213 (61.97%), Postives = 162/213 (76.06%), Query Frame = 1
Query: 724 YGKVFVAGGSKGVGRAVIDKLVEQGSEVVALVRREEVKAELEAITGVTAVVCDALDLKGVEGALDGCDAAITTLGGASRDGEEKRVDYVGNRNVIESAGILGITRLVLVTSVGCGSSREAISDEVYQNLEKALSAKTLAENMLLKYYTNSEWTIIRPGGLKSEPETGSAVLTEDTKIAGVVSRADVADLTVQVLNSPKTVRKILTAMDPAANS 1362
Y KVFVAGGSKGVGR ++DKL+E GSEVVALVR +E EL AI GVT ++ DA + K VE A+DGCDAAITTLG S + KRVDY GN NVIE+AGILG+TR++LVTS+GCGSS+EA V++ L+ L+AK AEN+L+KYYTN+ WTI+RPGGLKSEP TG A+LTED G + R DVA L V+ L S KT RK+L+A+D + S
Sbjct: 54 YKKVFVAGGSKGVGRLIVDKLIEDGSEVVALVRSQEAVDELGAIDGVTPILGDAFEYKNVENAMDGCDAAITTLGQGSATEDGKRVDYEGNSNVIEAAGILGVTRVILVTSIGCGSSKEAAPPSVFEVLKDVLAAKERAENVLIKYYTNTNWTIVRPGGLKSEPATGEAILTEDAMAIGSIHREDVASLIVKALTSSKTERKVLSAVDQSIPS 266
BLAST of mRNA_H-paniculata_contig159.3417.1 vs. uniprot
Match: A0A7S2V5P0_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V5P0_9STRA) HSP 1 Score: 254 bits (648), Expect = 6.450e-78 Identity = 130/214 (60.75%), Postives = 164/214 (76.64%), Query Frame = 1
Query: 709 KLQMVYGKVFVAGGSKGVGRAVIDKLVEQGSEVVALVRREEVKAELEAITGVTAVVCDALDLKGVEGALDGCDAAITTLGGASRDGEEKRVDYVGNRNVIESAGILGITRLVLVTSVGCGSSREAISDEVYQNLEKALSAKTLAENMLLKYYTNSEWTIIRPGGLKSEPETGSAVLTEDTKIAGVVSRADVADLTVQVLNSPKTVRKILTAMDP 1350
+L+M Y KVFVAG +KGVGR ++++LV + EVVA VRREE K EL + GVTA++ DAL K VEGA+DGCDAA+TTLG A D + +VDY GN NVIE+AGILG+TR +LVTSVGCG S+EA+S + Y+ LE AL AK AE +L KYYTNS+WT+IRPGGL + T +AVLTE+ GV++RADVA L V+ L+S KT RK+LTA+DP
Sbjct: 60 QLEMAYKKVFVAGAAKGVGRQIVEQLVAKDVEVVAFVRREEAKQELGGLKGVTAILGDALVQKDVEGAMDGCDAAVTTLGSAPTDEQRWKVDYDGNVNVIEAAGILGVTRCILVTSVGCGDSKEAVSPDAYEKLENALKAKEKAERVLTKYYTNSDWTVIRPGGLMNGEATSAAVLTENKMACGVINRADVASLVVKALDSQKTFRKVLTAVDP 273 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig159.3417.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig159.3417.1 >prot_H-paniculata_contig159.3417.1 ID=prot_H-paniculata_contig159.3417.1|Name=mRNA_H-paniculata_contig159.3417.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=277bp MMTGSRAFFVALLCSAYTCAFVIPTGARLGALGAKSRGDSGPSMKKLQMVback to top mRNA from alignment at H-paniculata_contig159:26448..30004+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig159.3417.1 ID=mRNA_H-paniculata_contig159.3417.1|Name=mRNA_H-paniculata_contig159.3417.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=3557bp|location=Sequence derived from alignment at H-paniculata_contig159:26448..30004+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig159:26448..30004+ >mRNA_H-paniculata_contig159.3417.1 ID=mRNA_H-paniculata_contig159.3417.1|Name=mRNA_H-paniculata_contig159.3417.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1662bp|location=Sequence derived from alignment at H-paniculata_contig159:26448..30004+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |