mRNA_H-paniculata_contig159.3415.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	mRNA_H-paniculata_contig159.3415.1
Unique Name	mRNA_H-paniculata_contig159.3415.1
Type	mRNA
Organism	Halopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)

Homology

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BLAST of mRNA_H-paniculata_contig159.3415.1 vs. uniprot
Match: D7FJ04_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FJ04_ECTSI)

HSP 1 Score: 397 bits (1021), Expect = 4.690e-126
Identity = 215/377 (57.03%), Postives = 270/377 (71.62%), Query Frame = 1

Query:  244 VEPLVTLLLSTDTALSLSDYAVDLGSVGEQAPDIVGATSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNLFNSIVESVTSAKDQVADTTLGSVDALKTQAGDLGANAIAPFRQFGENLSQGVLRGVDGVKSDAQQAVQGAQAQLGTSVSETIGNPLQESINQMFSNVFGTSPAEILKEEESLTSGLQETIKGVEAVATPSTLFYAENAAILPLWLGMIIWPEKPVTKAVMSSYATVIVAAFVYVWLTYEALQNPISQQAFSSGITNLEALTKGFGEEVSVSAAWAHFLAQDLFIGRWVYLDGQKNGIFTKHSLALCYLFGPIGVLSHLLTRTLFSVVKPGVADIMTVQTTTVKP------TPSAT--SEAKKMI 1350
            +EP+V+LLL+ D   SLS     LG + +QAPD++GA S                                N+++SIV++VTSAKDQ  DTTLGSVDALK Q  +L ANA++PF++ GE++S  +   +D +K  AQ AV  AQ Q G SV+E IGNP+QE + Q+FS  FGTSP E+LKEE++LT+G+Q+ IKGVE VA PSTLFYAENAAILPLW+GM++WPE+P+TK +M+SY  +++AA +Y+WLTYE  QNP+S Q F+SGITNL  LTKGFGEEVSV+ AW+HFLA+DLFIGRWVYLDGQ+N IFTKHSL LCYLFGP G LSHLLTR + SVVKPGV DIM  Q T   P      TPS+T   EAK++I
Sbjct:    7 IEPVVSLLLAADNDPSLST----LGDLAQQAPDVIGAASDLADSAQASVGESLGAIG--------------NVWDSIVDTVTSAKDQATDTTLGSVDALKYQVDELSANALSPFQRLGEDISNSLSGQLDSLKIGAQGAVGEAQTQFGQSVAENIGNPVQEGMGQVFSK-FGTSPEELLKEEQTLTNGVQQAIKGVERVAPPSTLFYAENAAILPLWVGMVVWPEEPLTKKIMNSYGPLVLAALIYMWLTYECFQNPVSLQGFASGITNLGGLTKGFGEEVSVATAWSHFLAEDLFIGRWVYLDGQRNKIFTKHSLVLCYLFGPAGFLSHLLTRGVTSVVKPGVRDIMQQQPTEPSPKTPSSGTPSSTLRREAKELI 364

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BLAST of mRNA_H-paniculata_contig159.3415.1 vs. uniprot
Match: A0A835YXE1_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YXE1_9STRA)

HSP 1 Score: 196 bits (499), Expect = 3.960e-51
Identity = 95/178 (53.37%), Postives = 121/178 (67.98%), Query Frame = 1

Query:  802 SGLQETIKGVEAVATPSTLFYAENAAILPLWLGMIIWPEKPVTKAVMSSYATVIVAAFVYVWLTYEALQNPISQQAFSSGITNLEALTKGFGEEVSVSAAWAHFLAQDLFIGRWVYLDGQKNGIFTKHSLALCYLFGPIGVLSHLLTRTLFSVVKPGVADIMTVQTTTVKPTPSATSE 1335
            + LQ  +   E VATP   F AEN  +LPLW GMI  P     + +M  Y+ +I+AA VY WLTYEALQNP+S   FS G  +L+ LTKGF +EVSV+  WAHF+AQDLF+GRWVYLD ++N ++  HSLALCYLFGPIGVLSHLLTR L  + +  V DI+ +   T + T +  S+
Sbjct:  149 TALQHIVTIAEKVATPKRTFLAENILVLPLWGGMIFAPNNKYVQKIMEGYSVIILAALVYAWLTYEALQNPVSLAGFSGGAFDLDTLTKGFTQEVSVADGWAHFIAQDLFVGRWVYLDSKRNSVWAAHSLALCYLFGPIGVLSHLLTRGLSGIFRQDVTDILDIGVATERETKAPKSK 326

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BLAST of mRNA_H-paniculata_contig159.3415.1 vs. uniprot
Match: A0A7S3Y5E5_HETAK (Hypothetical protein n=3 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y5E5_HETAK)

HSP 1 Score: 180 bits (456), Expect = 1.090e-44
Identity = 90/177 (50.85%), Postives = 121/177 (68.36%), Query Frame = 1

Query:  829 VEAVATPSTLFYAENAAILPLWLGMIIWPEKPVTKAVMSSYATVIVAAFVYVWLTYEALQNPISQQAFSSGITNLEALTKGFGEEVSVSAAWAHFLAQDLFIGRWVYLDGQKNGIFTKHSLALCYLFGPIGVLSHLLTRTLFSVVKPGVADIMTV---QTTTVKPTPSATSEAKKMI 1350
            +E   TP+T+F  +N A LPLWL MI +P+  VTK +M SY  +   + +YVW  Y A Q+P + Q FS  IT+L ALTKGFG EV+V+ AWAHF+AQDLF+GR++YLDG KNG+FT+HS+AL YLFGP G+LSHL+TR    ++ PG  DI+      +T  KP P  T++    +
Sbjct:  280 LETKLTPNTVFTIDNVASLPLWLAMIGFPQNGVTKGLMKSYLPISAFSMLYVWSAYLAFQDPQALQGFSEAITSLPALTKGFGSEVAVATAWAHFIAQDLFVGRFIYLDGLKNGVFTRHSVALAYLFGPAGLLSHLVTRGFVGLLNPG-QDIIEAGMSASTIPKPMPQPTAKVSSAV 455

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BLAST of mRNA_H-paniculata_contig159.3415.1 vs. uniprot
Match: A0A7S0KR27_MICPS (Hypothetical protein n=2 Tax=Micromonas TaxID=38832 RepID=A0A7S0KR27_MICPS)

HSP 1 Score: 166 bits (421), Expect = 3.440e-43
Identity = 76/140 (54.29%), Postives = 99/140 (70.71%), Query Frame = 1

Query:  826 GVEAVATPSTLFYAENAAILPLWLGMIIWPEKPVTKAVMSSYATVIVAAFVYVWLTYEALQNPISQQAFSSGITNLEALTKGFGEEVSVSAAWAHFLAQDLFIGRWVYLDGQKNGIFTKHSLALCYLFGPIGVLSHLLTR 1245
            G+E + TP T+F  ENAAI P WLGMI +P+  VT+ VM SYA  I+  FVY++LTY +  +P   +AFS+G  +L AL+KGF  E  ++  WAHF+A DLF+GRW+YLD +KN +F  HSL LC  FGP GV+SH LTR
Sbjct:   55 GLEWIPTPETVFDVENAAIFPFWLGMIAFPKNKVTETVMGSYAVPILLGFVYIYLTYYSFSDPRIIEAFSTGKPDLAALSKGFSYEWCMAVGWAHFIAMDLFVGRWIYLDARKNDVFAAHSLLLCLFFGPTGVISHTLTR 194

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BLAST of mRNA_H-paniculata_contig159.3415.1 vs. uniprot
Match: W7U388_9STRA (Uncharacterized protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7U388_9STRA)

HSP 1 Score: 175 bits (443), Expect = 6.660e-43
Identity = 99/251 (39.44%), Postives = 146/251 (58.17%), Query Frame = 1

Query:  637 VKSDAQQAVQGAQAQLGTSVSETIGN------PLQESINQMFSNVFGT-------SPAEILKEEESLTSGLQETIKGVEAVATPSTLFYAENAAILPLWLGMIIWPEKPVTKAVMSSYATVIVAAFVYVWLTYEALQNPISQQAFSSGITNLEALTKGFGEEVSVSAAWAHFLAQDLFIGRWVYLDGQKNGIFTKHSLALCYLFGPIGVLSHLLTRTLFSVVKPGVADIMTVQTTTVKPTPSATSEAKKMI 1350
            +KS   + V    + LG++ +E  G+      P  E   +   + F         +  E+ K+ E+L+  L    + ++ V TP  LF AEN  ILP W  +I+ P     K ++SSY  V+VAA  Y W  Y A Q+P + + F+S I++L AL+KG G E   + AWAHF+AQDLF+GRW++LDG +NG++T HSL L +LFGP G+LSHLLTR+   + +  +ADIMT  +  V P+ +A   AK M+
Sbjct:  195 LKSQVGEIVGSRLSGLGSAFTEKAGDVLIPYQPFLEQTKRQLGDKFSVVSQFAEQATQELSKDAETLSPAL----RALKTVGTPRNLFNAENIVILPFWASVILAPSNTFVKTLVSSYLPVLVAALAYTWSAYLAFQDPAALEGFAS-ISDLSALSKGLGTEAGTATAWAHFIAQDLFVGRWIFLDGIRNGVWTAHSLTLAFLFGPTGILSHLLTRSFVKIFRWDIADIMTTGSRAVAPS-AADDMAKSMV 439

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BLAST of mRNA_H-paniculata_contig159.3415.1 vs. uniprot
Match: A0A7S3Y5F1_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y5F1_HETAK)

HSP 1 Score: 154 bits (389), Expect = 3.610e-39
Identity = 78/153 (50.98%), Postives = 105/153 (68.63%), Query Frame = 1

Query:  901 MIIWPEKPVTKAVMSSYATVIVAAFVYVWLTYEALQNPISQQAFSSGITNLEALTKGFGEEVSVSAAWAHFLAQDLFIGRWVYLDGQKNGIFTKHSLALCYLFGPIGVLSHLLTRTLFSVVKPGVADIMTV---QTTTVKPTPSATSEAKKMI 1350
            MI +P+  VTK +M SY  +   + +YVW  Y A Q+P + Q FS  IT+L ALTKGFG EV+V+ AWAHF+AQDLF+GR++YLDG KNG+FT+HS+AL YLFGP G+LSHL+TR    ++ PG  DI+      +T  KP P  T++    +
Sbjct:    1 MIGFPQNGVTKGLMKSYLPISAFSMLYVWSAYLAFQDPQALQGFSEAITSLPALTKGFGSEVAVATAWAHFIAQDLFVGRFIYLDGLKNGVFTRHSVALAYLFGPAGLLSHLVTRGFVGLLNPG-QDIIEAGMSASTIPKPMPQPTAKVSSAV 152

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BLAST of mRNA_H-paniculata_contig159.3415.1 vs. uniprot
Match: C1N0R2_MICPC (Predicted protein (Fragment) n=1 Tax=Micromonas pusilla (strain CCMP1545) TaxID=564608 RepID=C1N0R2_MICPC)

HSP 1 Score: 147 bits (371), Expect = 1.350e-37
Identity = 70/131 (53.44%), Postives = 86/131 (65.65%), Query Frame = 1

Query:  853 TLFYAENAAILPLWLGMIIWPEKPVTKAVMSSYATVIVAAFVYVWLTYEALQNPISQQAFSSGITNLEALTKGFGEEVSVSAAWAHFLAQDLFIGRWVYLDGQKNGIFTKHSLALCYLFGPIGVLSHLLTR 1245
            T+F  EN AI PLWLGMI  P+  VT+AVM S     V  FVYV+LT+ +  +P    AFS+G  +L AL KGF  E  V+  WAHF+A DLF GRW+YLD +KN +F  HSL LC  FGP G +SH+ TR
Sbjct:    2 TVFNVENVAIFPLWLGMIFAPKSGVTRAVMDSALVPCVCGFVYVYLTWYSFHDPRILDAFSTGKPDLAALAKGFSYEWCVAVGWAHFIAMDLFAGRWIYLDARKNDVFAAHSLLLCLFFGPTGAISHVTTR 132

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BLAST of mRNA_H-paniculata_contig159.3415.1 vs. uniprot
Match: A0A0G4GWJ9_VITBC (Uncharacterized protein n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4GWJ9_VITBC)

HSP 1 Score: 130 bits (327), Expect = 3.690e-30
Identity = 63/142 (44.37%), Postives = 85/142 (59.86%), Query Frame = 1

Query:  820 IKGVEAVATPSTLFYAENAAILPLWLGMIIWPEKPVTKAVMSSYATVIVAAFVYVWLTYEALQNPISQQAFSSGITNLEALTKGFGEEVSVSAAWAHFLAQDLFIGRWVYLDGQKNGIFTKHSLALCYLFGPIGVLSHLLTR 1245
            +  + A+  PS +F A NA +LP W  M+I P   VT+ +M S    IV   +Y+WL   +   P + +    G   L  LTK F  E  V+  W HFLA+DLF+GRWVYLDG+KN +  +HS  L  LFGP+GV+SHL+TR
Sbjct:   88 VDALPALLQPSAVFTASNAFVLPFWALMVIAPGAQVTEKLMRSVTPFIVLGLLYLWLAVISSTFPEAVEGLGQGAGQLPVLTKAFSLEPVVATGWVHFLAEDLFVGRWVYLDGRKNDVPIRHSCLLSLLFGPLGVVSHLVTR 229

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BLAST of mRNA_H-paniculata_contig159.3415.1 vs. uniprot
Match: B4W015_9CYAN (Uncharacterized protein n=1 Tax=Coleofasciculus chthonoplastes PCC 7420 TaxID=118168 RepID=B4W015_9CYAN)

HSP 1 Score: 121 bits (303), Expect = 3.500e-28
Identity = 60/133 (45.11%), Postives = 83/133 (62.41%), Query Frame = 1

Query:  844 TPSTLFYAENAAILPLWLGMIIWPEKPVTKAVMSSYATVIVAAFVYVWLTYEALQNPISQQAFSSGITNLEALTKGFGEEVSVSAAWAHFLAQDLFIGRWVYLDGQKNGIFTKHSLALCYLFGPIGVLSHLLT 1242
            TPS LF   N  +LP WL MI+ P   +T+ VM SY   +  A +Y++    +L  P S QA S+    L  + + FG+E+  +A W HFL  DLF+GRW+Y +GQ+ G++T HSL LC   GPIG+LSH+LT
Sbjct:    2 TPSLLFTIANLFVLPFWLLMILLPNWGITRKVMESYLPFVPLAGLYIYFFANSL-TPESAQALSN--PQLADIARFFGDEIIAAAGWTHFLVLDLFVGRWIYWEGQRTGLWTIHSLVLCLFAGPIGLLSHILT 131

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BLAST of mRNA_H-paniculata_contig159.3415.1 vs. uniprot
Match: A0A7X6CRJ1_9CYAN (DUF4281 domain-containing protein n=1 Tax=Microcoleus sp. SU_5_6 TaxID=2720483 RepID=A0A7X6CRJ1_9CYAN)

HSP 1 Score: 120 bits (300), Expect = 8.860e-28
Identity = 59/133 (44.36%), Postives = 83/133 (62.41%), Query Frame = 1

Query:  844 TPSTLFYAENAAILPLWLGMIIWPEKPVTKAVMSSYATVIVAAFVYVWLTYEALQNPISQQAFSSGITNLEALTKGFGEEVSVSAAWAHFLAQDLFIGRWVYLDGQKNGIFTKHSLALCYLFGPIGVLSHLLT 1242
            TP  +F A N  +LP W  MI+ P   +T+ VM+S+    V A +Y++L   +L  P +  A S+    L  + K  GEE + +  W HFL  DLF+GRW+YL+GQK G++T HSLALC   GP+G+LSH+LT
Sbjct:    3 TPELIFTAGNLFVLPFWAIMILLPNWVITRKVMNSFIPFAVLAALYIYLFVASL-TPENAAALSN--PKLADIAKFLGEETAAATGWIHFLVMDLFVGRWIYLEGQKTGVWTVHSLALCLFAGPMGLLSHILT 132

The following BLAST results are available for this feature:

BLAST of mRNA_H-paniculata_contig159.3415.1 vs. uniprot

BLAST of mRNA_H-paniculata_contig159.3415.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D7FJ04_ECTSI	4.690e-126	57.03	Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2...	[more]
A0A835YXE1_9STRA	3.960e-51	53.37	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
A0A7S3Y5E5_HETAK	1.090e-44	50.85	Hypothetical protein n=3 Tax=Heterosigma akashiwo ...	[more]
A0A7S0KR27_MICPS	3.440e-43	54.29	Hypothetical protein n=2 Tax=Micromonas TaxID=3883...	[more]
W7U388_9STRA	6.660e-43	39.44	Uncharacterized protein n=2 Tax=Monodopsidaceae Ta...	[more]
A0A7S3Y5F1_HETAK	3.610e-39	50.98	Hypothetical protein n=1 Tax=Heterosigma akashiwo ...	[more]
C1N0R2_MICPC	1.350e-37	53.44	Predicted protein (Fragment) n=1 Tax=Micromonas pu...	[more]
A0A0G4GWJ9_VITBC	3.690e-30	44.37	Uncharacterized protein n=2 Tax=Vitrella brassicaf...	[more]
B4W015_9CYAN	3.500e-28	45.11	Uncharacterized protein n=1 Tax=Coleofasciculus ch...	[more]
A0A7X6CRJ1_9CYAN	8.860e-28	44.36	DUF4281 domain-containing protein n=1 Tax=Microcol...	[more]

Pages

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-paniculata_contig159	contig	H-paniculata_contig159:7748..14601 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous	2021-02-24

Properties


Property Name	Value
Taxonomic scope	Eukaryota
Seed ortholog score	399.8
Seed ortholog evalue	1.9e-108
Seed eggNOG ortholog	2880.D7FJ04
Hectar predicted targeting category	chloroplast
GOs	GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006066,GO:0006082,GO:0006629,GO:0006714,GO:0006720,GO:0006721,GO:0008150,GO:0008152,GO:0008299,GO:0008610,GO:0009058,GO:0009507,GO:0009526,GO:0009536,GO:0009687,GO:0009688,GO:0009941,GO:0009987,GO:0016053,GO:0016106,GO:0016108,GO:0016109,GO:0016114,GO:0016116,GO:0016117,GO:0016122,GO:0016123,GO:0019222,GO:0019752,GO:0031323,GO:0031967,GO:0031975,GO:0032787,GO:0032928,GO:0042440,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043288,GO:0043289,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044283,GO:0044422,GO:0044424,GO:0044434,GO:0044435,GO:0044444,GO:0044446,GO:0044464,GO:0046148,GO:0046165,GO:0046394,GO:0050789,GO:0050794,GO:0065007,GO:0071704,GO:0072330,GO:0090322,GO:1901576,GO:1901615,GO:1901617,GO:1902644,GO:1902645,GO:2000377
EggNOG free text desc.	xanthophyll metabolic process
EggNOG OGs	28P8V@1,2QVVZ@2759
COG Functional cat.	S
Best tax level	Eukaryota
Best eggNOG OG	NA\|NA\|NA
Exons	10
Model size	2783
Cds size	1566
Stop	1
Start	1

Relationships

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
mRNA_H-paniculata_contig159.3415.1	prot_H-paniculata_contig159.3415.1	Halopteris paniculata Hal_grac_a_UBK monoicous	polypeptide	H-paniculata_contig159 8923..14559 -

The following UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1622929268.2119825-UTR-H-paniculata_contig159:7747..8922	1622929268.2119825-UTR-H-paniculata_contig159:7747..8922	Halopteris paniculata Hal_grac_a_UBK monoicous	UTR	H-paniculata_contig159 7748..8922 -
1691480794.3244824-UTR-H-paniculata_contig159:7747..8922	1691480794.3244824-UTR-H-paniculata_contig159:7747..8922	Halopteris paniculata Hal_grac_a_UBK monoicous	UTR	H-paniculata_contig159 7748..8922 -
1622929268.3842845-UTR-H-paniculata_contig159:14559..14601	1622929268.3842845-UTR-H-paniculata_contig159:14559..14601	Halopteris paniculata Hal_grac_a_UBK monoicous	UTR	H-paniculata_contig159 14560..14601 -
1691480794.429064-UTR-H-paniculata_contig159:14559..14601	1691480794.429064-UTR-H-paniculata_contig159:14559..14601	Halopteris paniculata Hal_grac_a_UBK monoicous	UTR	H-paniculata_contig159 14560..14601 -

The following CDS feature(s) are a part of this mRNA:

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at H-paniculata_contig159:7748..14601-
coding sequence from alignment at H-paniculata_contig159:7748..14601-

protein sequence of mRNA_H-paniculata_contig159.3415.1

>prot_H-paniculata_contig159.3415.1 ID=prot_H-paniculata_contig159.3415.1|Name=mRNA_H-paniculata_contig159.3415.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=522bp
MTCTRNFYNMAEGSRFLLLLSAFLLCGRTQSFVGFNAALSLSSRLPSRIA
KAGAVARKLRVQMAIETVEPLVTLLLSTDTALSLSDYAVDLGSVGEQAPD
IVGATSDALGVAADLTGSAQSSINDAFGSVGESLGLVGNLFNSIVESVTS
AKDQVADTTLGSVDALKTQAGDLGANAIAPFRQFGENLSQGVLRGVDGVK
SDAQQAVQGAQAQLGTSVSETIGNPLQESINQMFSNVFGTSPAEILKEEE
SLTSGLQETIKGVEAVATPSTLFYAENAAILPLWLGMIIWPEKPVTKAVM
SSYATVIVAAFVYVWLTYEALQNPISQQAFSSGITNLEALTKGFGEEVSV
SAAWAHFLAQDLFIGRWVYLDGQKNGIFTKHSLALCYLFGPIGVLSHLLT
RTLFSVVKPGVADIMTVQTTTVKPTPSATSEAKKMIASAKKEAEAIIAQA
RKDGESQASSLLQSAETEALDILKGAEVERSALLKANKTESEKDKTKAEV
STQPTSSSPMQSTSTDVASTS*

mRNA from alignment at H-paniculata_contig159:7748..14601-

Legend: UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_H-paniculata_contig159.3415.1 ID=mRNA_H-paniculata_contig159.3415.1|Name=mRNA_H-paniculata_contig159.3415.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=6854bp|location=Sequence derived from alignment at H-paniculata_contig159:7748..14601- (Halopteris paniculata Hal_grac_a_UBK monoicous)
CGAACCCCCACCCGGCTCGTGTGCCGCTGTCTACCCTCTGTCATGACATG
CACACGGAACTTTTACAATATGGCCGAGGGATCTCGTTTCCTTCTTCTGC
TGTCGGCGTTCCTCTTGTGCGGCCGTACCCAATCCTTTGTCGGTTTCAAT
GCTGCTCTTTCGTTATCATCACGATTACCTTCACGAATAGCAAAAGCTGG
TGCTGTTGCAAGGAAGCTACGAGTACAGATGGCGATCGAGACAGTGGAAC
CTTTGGTCACGCTTCTCCTTTCTACAGATACTGCCTTGTCGCTCAGGTGC
AGCTTGTCCGGTGCTAGTCACCACGGAATATGTGTATGCTGTGCACAGTA
AATAGCAGTGCTGTAGGAAAACTACTGAATAGTTGGTACGAAAGATCTGT
TACTGTAGAGCAGGTTCAACAAGAGACGTTATGGACTGATGTCGACCTCC
GCTCTGCTCATACGTCGTGCGCAAAAGGTACATGGATGTGTTTCTATGAT
GCTCTCAGCCTGCCACGGTTGCCTAATACCCGGCGTCCAGCGACAATAAT
CTTTGGTAACCTAGTGTCAGTTACCTGGTGACAAACGGAGTGTGAAATTG
TACGCTACACTTCCCCCCAACACTCCCCCCTGCTCACTTATATTCTCAGT
GATTATGCGGTCGATTTGGGGAGTGTAGGGGAGCAAGCACCAGATATCGT
TGGAGCTACTTCAGACGCCCTAGGAGTTGCTGCAGATCTGACAGGATCTG
CACAATCGTCCATCAACGATGCATTTGGTTCCGTTGGCGAATCTCTGGGC
TTGGTCGGAAATTTGTTCAATTCCATCGTAGAGTCGGTTACCTCGGCCAA
GGATCAGGTATGTATTTCCAATGAGGCACAGTAGCGAGGAATGATGAATG
TGTCCGTATCGTTAGTTCATTTCAGGAGATTTGAGCGTAGAGCAGGTTAG
TGATATCACCAATTCAAAAGGCCTGATTTCGGGTCTGTTTACTACTTGTT
AGTTGCTATCCGTAGCTCGAGCAGGCCAAAGCCAGTTCATATGTAGCATG
ATAATGCTGGATTCGTATCTACGTAAGAATACCGCGAATATCGTGAACGA
AAATAATACGGCTCATGAACATTTACATTTCATGCTCCAAAATGGGTGTA
CATGAATAGAATATGTAGCATACTCGACCTATTCACTTGACGAGGGGGCG
CGCACATGCTTCCAAAGTGTCCCACTCCCACGTGCGGACCTATGGCACAA
CAGTAATCATGCACTTTTTCGTGTCAGGGGGTTATGCTACAAGCGTGCAA
AATTGCATTCAGCAAAATATGGATTAAAATGAAATCGACCATATGTGAAG
GCGTGCGTAGGAAGAATATTCTTACGTGGTCAAGATCACCATTGTTGGTC
ATGACTTATTTTTGCTGATAAGTGTACAAGACTGAAGTGTGAAAAACTGC
ATAACCTTAACGTAGGTACGATGGAGTTATCAAATAGGCGTTAGAGCCCC
CTCGAGTGATGTAATTTTGCTGTTAAATATAAACAACTGAAGTTTGATGT
TAACTATTGCATAACATACTCCAATGTGGGTACAATTGAGTTATTATGTA
AGCTTCAGAGCTTGCTCCAATCCCCTCCCCTTCCAAGGAGACATATTCAA
TACGGGAACCAAGAAATGAAACGGAAAACGCTCATCAGAGAGCCGTTTGC
ATCGGCCTCGTGCTATGTGTTTATGCCGCTCACTTGATTAGCTCGGTTGT
TACTTTCTACAGGTTGCCGACACTACCCTGGGTTCCGTCGACGCGCTGAA
GACTCAGGTGAGCATAAAATTATCGCTAGTTTCAAGACTTCTGGCATGTA
CTCTACATTTCCTCCGCTCAGGAGGCACCTCTGCGGGCGAAACCTAACTT
CTTCGAAAGCTCCCGTTACCAGTTTCCTAAATGGTGCTATACGCGTGTTT
TTTCTGGTACTGGTTGATTCTTGGTCTCCGGAACCTCACTTGAAGTAATG
TGTATGGGCATTCAAAAATCAGGATTTCGCTTGTTCCTCGACAGCAGCGA
AGAAGTACAACTAACCGACTGTACGGCCGGGTATGAGAAGCCTTTGAATG
TCAACTTTCAAATGGTACCTTGTAAGTATAGGGTAGAGAACATGCTGTGG
TGATTTGCCGTCTAAGTCATCATTCCTTTTGCTTTTCCTTCTGCACCAAC
AACAGCCTCCATGTGCAACCGATAAATGACTCTACGATCCAAAAGTACCA
TAAATATACCAGGCAAGGGAATCATGGTTACCCAGATTTAAAAAGAAATC
CAATAACTTCCTGGGTGCAAAGCAGCCGCCCTGGAGAAAGTACGGCGCGC
GACCATTGAATGAAGACGAGCGTACATACACCTGGTGTCTCAGTGGAACA
AACCTGCTAAAAATGTAAAGCATCCCTGTTGCAAACATTCAGGGCAGGCT
CATCTTTGGACCAAAATCACGAGCTATGTTTCAAGAATTCCGTATGTCTT
TGATGTTACGTTTCTTTTATTACAATACGCATTATTCCAGTGGTGCGGCC
TGCGCCAGTTCACAGCACAATACAATAAATTTTGTCGGACGGGTCCACCT
GATTTAAGAGCAACCGATCTGTTGATTTCACGAGTCCTCAAAAGCTGGAG
TGGTGTACTGTGACTTCGTTGCGACAGGCCGGTGACTTGGGCGCGAATGC
CATCGCTCCGTTTCGTCAATTTGGAGAGAATCTTTCTCAAGGCGTTTTGA
GAGGAGTTGACGGAGTCAAGAGTGACGCGCAGCAGGCAGTTCAGGGGGCT
CAGGCACAGTTAGGGACGTCGGTATCGGAAACAATCGGGAATCCACTGCA
AGTGAGCTAGTTAATCGAGGTTTGATGCCTCCGGTATACACGTGTACAGC
TCAAAGATGATGCCACCACGATTGGTTATGGAAGTGATTTTATTTTTAGA
TACAATATCATGTTTTTGTGGAACCGTTCAATCTCGAGTTTCCGTCTCAA
GACGGTACATTTCGGGGCACCTTGGATGTGATTGGCCGCGCGCTGAGCGT
GCTGTGCTATCGGTTGTTTTTCACTGGTTATACTGCTCCGAACCGTTTGC
TTTGAAGCAGTGTCATTCATGATGAGGGCCTCGCTCGGTTGTTTTTGTCA
CGCAGGAGAGCATCAACCAGATGTTCTCAAATGTGTTCGGGACGTCACCA
GCGGAAATTTTGAAGGAAGAGGAGAGCCTGACGTCTGGTCTTCAAGAGGT
CAGCTTACGTAGCTATAAGGGCGTTGAAGTGCACGGTACTGTACGATTCG
GTAGGAAAGGGTCGAAGGGCTTAAACTGGCTGATTCGCCGTATTGTTGAC
GGCATAACATGTGTATATGCCGATCTTGCTTGCGGATGCTGTTGTGCTAT
TCCACGTTGTGTGTCAAACTATTTTTCAGACGATCAAGGGTGTGGAGGCA
GTGGCAACTCCAAGTACTTTATTCTATGCGGAAAATGCTGCCATCCTTCC
ATTGTGGCTGGGCATGATCATCTGGCCAGAGAAGCCTGTGACCAAGGCGG
TGATGTCGAGCTACGCCACGGTGATTGTCGCTGCATTTGTTTACGTGTGG
CTCACCTACGAAGCCCTCCAGGTGCATGCGAGTGATAACATGGCATATTA
GGTGGCCACTAAAACGTTTATTCAAACTATATTGTCTGCAAGTCATTTTT
GATACTGGGAATGTGCCGTAGGCGTTTTCACTCACATCGGGACTCATTAA
AACGAGGAATTTCTGTAGAAAGTGTTTTGGGAGAATAAAGTGAAAGGATA
GCAAACGGTGGAATAGAACAGAGGAGATATATAAGAATGGAAATGAGATG
ACGAGAAACGGATGAGAATCCTATGGGAATAAACTTGCGCTGATAGCTGA
GAGACACGCGGGGGTGCCTGAATTACGATATTTTGAACTAAGTGGCACAT
GATTCAAGTTCTTATTTCATGTCGATATGTGGTGCTCGTTACCCACAACG
CCAACGTTTTTCACTCTTCTTGGATGGTAAAGATGTTTTAAACTGTGTCT
TTACAATGGTTTTATTAGGGTAACGGAGTATTGAAGTACCTCCAACACCT
CTTGGCGTAATAGCCGTACCCCCCCCCTCCGCTCATGGGGCAATCGTATC
TGTATGGTACCCCTGATTTGATCACCTTTGGGTTGAAACCGTGGCGCTTC
TCGTCGTACATATGGATCAAATTTCAAAGACAACCCGATCATAGATCGTT
CTTAACCAATTTAGCGCCGTATGCTGCTTGGGGGCAAAAAAAGCTATCTG
ACAATCCCGCCACGAATTATGAGAGGGTGGTCGTTTTTCACGAGGGGGTT
AGGTTTTGGCGTCATCGTGCTGGAATACGACCACGCAATTTCCAGACAAA
AATGGTATGGCTTCTGGCCAGTACCAATAACGTTAATTTGCCTGCACCAT
GGTTCCACGTCCTCCTGTGCCATTTGTTCAGAACCCCATCTCTCAGCAGG
CGTTCTCGAGCGGAATCACCAACCTCGAGGCGTTGACCAAGGGGTTCGGA
GAGGAGGTTTCAGTATCTGCAGCGTGGGCTCACTTTCTGGCACAGGACCT
TTTCATTGTGAGTTGAACTCTGCCGGACGCTGTAATTGGAAGTATCTCGT
TTGATACCGAATTGCCTGTTTGGATGTTTATGCAGCGTGGCTAATACGTC
TCTCGTTTGCTACTTCTCCCCGCAGGGCCGATGGGTGTATCTTGATGGGC
AGAAGAATGGCATTTTCACCAAGCACAGCCTGGCTCTCTGCTATCTCTTC
GGTCCAATCGGGGTTTTGAGTCACCTGCTTACGCGAACCCTGTTCAGCGT
TGTCAAACCAGGCGTCGCAGACATAATGACGGTATGTGTGTGGGTCCTGG
AGTACGTAGGTACGGATCTAATAAACTTACAGCGTTTCCCCTTACGCCTT
TCTGGGCGTCTACGTCGTCATTCATCGTTTCTGCGCGCTCGCTGCTGTAA
GCTGTCGCAATGGCCTGAGTCGTCGTGTACTATCCCTACTTAGGTGCAGA
CGACAACAGTCAAACCTACTCCTTCAGCAACCTCAGAAGCAAAGAAGATG
ATCGCGTCTGCGAAGAAGGAAGCGGAAGCCATTATCGCCCAGGCGCGTAA
GGACGGTGAATCGCAGGCCTCTTCTTTGCTTCAGGTGAGGGGTTCAGTTT
TTTAGGCTCTTGTGATGTGGGGTAAATCTATACAAATTGGTAATTATTAG
TGACGTGCACAGACATGTTGGGTGTTCAAGCACCCTAGTAGGCAATATGT
ACGCTCTCGGCAGTTTCGATTTATTTGGTCGTTGATACCCGAGACTCTAC
GTACGGGGTATGCAACACAGCTTACGAGGCTCTACGATAAAGTCAGTGTT
TACCCCAATATTTCCACGATCTGCACATCGTTGCTGATGAACGTTGCAAT
CAGATTGCCTACTGACCGTGCTGTTCCTACCCGTCACACGCTCGATTCTC
AGTCTGCTGAGACAGAGGCGCTCGACATCCTGAAAGGAGCAGAGGTGGAG
CGCTCGGCGCTATTGAAAGCGAACAAAACTGAGTCGGAGAAAGATAAAAC
GAAAGCGGAAGTTTCAACCCAGCCGACGTCATCAAGCCCAATGCAATCGA
CATCCACCGACGTTGCTAGCACGTCGTAAACCTTGGCTTGTAGGTGGTGC
GGATGTTCACAGACATTGAGCTCTATGTTCTTCGACGCATATAGTGGGCG
TGTTGTATAGAGAGTTGGTGTTGCATTGGTGCTTTAGAGATGTGGCGTGT
CAACGAGTGGATTGGCACGACGGCAGGATTGAAGAAGTCATGTAGCTGAC
AACGTATAATTTTGCATTGCAAGATATTGACCTGCTTGTGTGGTGATAAA
CGTGATTCCAGAAGACAGCTTGTGTGGTGGCAAGATGGATAGAATATCTG
AATCGCCGTTTGTTATGTGTAATCTTGCATGTACGTGCCGTCAGTGGTGC
GTTATGTGCAACGTGTGTGTAGGTACAGTCAACGCGATGCGCTTGTTTTT
GTAAAAAACACAAGCTTACCCAATTGTAGTGGGAATCACCCTCAAACGTG
CCCAGACCTGTGTTCTGGTATTCCCACGCTGTTGGTTGACCACTACTAAT
TGTGATGTTAATCAAGCTAAAGGTCGGTTGTAAGTGTTCGTCAGTAGTAC
TCACCTTCGCGGTGTATAGATATGGACGAGCGATCCCAATTTTGCGGGAA
TAAGCATGAAAATCTGGCCTGTTACACGTCCGAAAGAATGTAACCTGCAT
ATTGCCAGCAAGTGCGGAGTGAGCTAGGTGTCCCATCGGGAGATGTCACT
TGCCTCCTCTTGCTGGGTGGATATTCGTGACGAAACTGGAACAATTGCGT
GGAACCGCATTGTGCCGGGTATGCAAACCTCGCCCAAAAGCTTAAGTCAA
TACTCCGCGCCTGGTCGCAAGTGCCCTATATTCATGAAAATATATTGGGG
CGCATCTGTACTACCAGGATTTGTATATTTGAACGGGAGTTATTGTAACA
GACTAGGTACGCGATACTCGTGTAAAATGCGTCGCAAATTCCATCACTCG
GCCAATCGATTGCCCCCCAAGTGATTAATCTAAGGTTCTGGGATTTGTAG
CGTGCTCTTATCGTGCTGTTTCCGGCGTCACCGAGTTGTCTTTTTTTCCC
GTCGTGGATCATCCCTCCTGTCGGAACCTTCCACACGAAGCTAGGAGTTT
AATGTCCCAGTTCTTGTCGTCAATGCTGGAGTTGACGGTGGTATGCTCTG
AAGAGCATTGTTCTCCCTGTCGAAGACATTGTTTGCCGCGTACTAACATT
TTCC

Coding sequence (CDS) from alignment at H-paniculata_contig159:7748..14601-

>mRNA_H-paniculata_contig159.3415.1 ID=mRNA_H-paniculata_contig159.3415.1|Name=mRNA_H-paniculata_contig159.3415.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=3132bp|location=Sequence derived from alignment at H-paniculata_contig159:7748..14601- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGACATGCACACGGAACTTTTACAATATGGCCGAGGGATCTCGTTTCCT
TCTTCTGCTGTCGGCGTTCCTCTTGTGCGGCCGTACCCAATCCTTTGTCG
GTTTCAATGCTGCTCTTTCGTTATCATCACGATTACCTTCACGAATAGCA
AAAGCTGGTGCTGTTGCAAGGAAGCTACGAGTACAGATGGCGATCGAGAC
AGTGGAACCTTTGGTCACGCTTCTCCTTTCTACAGATACTGCCTTGTCGC
TCAGATGACATGCACACGGAACTTTTACAATATGGCCGAGGGATCTCGTT
TCCTTCTTCTGCTGTCGGCGTTCCTCTTGTGCGGCCGTACCCAATCCTTT
GTCGGTTTCAATGCTGCTCTTTCGTTATCATCACGATTACCTTCACGAAT
AGCAAAAGCTGGTGCTGTTGCAAGGAAGCTACGAGTACAGATGGCGATCG
AGACAGTGGAACCTTTGGTCACGCTTCTCCTTTCTACAGATACTGCCTTG
TCGCTCAGTGATTATGCGGTCGATTTGGGGAGTGTAGGGGAGCAAGCACC
AGATATCGTTGGAGCTACTTCAGACGCCCTAGGAGTTGCTGCAGATCTGA
CAGGATCTGCACAATCGTCCATCAACGATGCATTTGGTTCCGTTGGCGAA
TCTCTGGGCTTGGTCGGAAATTTGTTCAATTCCATCGTAGAGTCGGTTAC
CTCGGCCAAGGATCAGTGATTATGCGGTCGATTTGGGGAGTGTAGGGGAG
CAAGCACCAGATATCGTTGGAGCTACTTCAGACGCCCTAGGAGTTGCTGC
AGATCTGACAGGATCTGCACAATCGTCCATCAACGATGCATTTGGTTCCG
TTGGCGAATCTCTGGGCTTGGTCGGAAATTTGTTCAATTCCATCGTAGAG
TCGGTTACCTCGGCCAAGGATCAGGTTGCCGACACTACCCTGGGTTCCGT
CGACGCGCTGAAGACTCAGGTTGCCGACACTACCCTGGGTTCCGTCGACG
CGCTGAAGACTCAGGCCGGTGACTTGGGCGCGAATGCCATCGCTCCGTTT
CGTCAATTTGGAGAGAATCTTTCTCAAGGCGTTTTGAGAGGAGTTGACGG
AGTCAAGAGTGACGCGCAGCAGGCAGTTCAGGGGGCTCAGGCACAGTTAG
GGACGTCGGTATCGGAAACAATCGGGAATCCACTGCAAGCCGGTGACTTG
GGCGCGAATGCCATCGCTCCGTTTCGTCAATTTGGAGAGAATCTTTCTCA
AGGCGTTTTGAGAGGAGTTGACGGAGTCAAGAGTGACGCGCAGCAGGCAG
TTCAGGGGGCTCAGGCACAGTTAGGGACGTCGGTATCGGAAACAATCGGG
AATCCACTGCAAGAGAGCATCAACCAGATGTTCTCAAATGTGTTCGGGAC
GTCACCAGCGGAAATTTTGAAGGAAGAGGAGAGCCTGACGTCTGGTCTTC
AAGAGGAGAGCATCAACCAGATGTTCTCAAATGTGTTCGGGACGTCACCA
GCGGAAATTTTGAAGGAAGAGGAGAGCCTGACGTCTGGTCTTCAAGAGAC
GATCAAGGGTGTGGAGGCAGTGGCAACTCCAAGTACTTTATTCTATGCGG
AAAATGCTGCCATCCTTCCATTGTGGCTGGGCATGATCATCTGGCCAGAG
AAGCCTGTGACCAAGGCGGTGATGTCGAGCTACGCCACGGTGATTGTCGC
TGCATTTGTTTACGTGTGGCTCACCTACGAAGCCCTCCAGACGATCAAGG
GTGTGGAGGCAGTGGCAACTCCAAGTACTTTATTCTATGCGGAAAATGCT
GCCATCCTTCCATTGTGGCTGGGCATGATCATCTGGCCAGAGAAGCCTGT
GACCAAGGCGGTGATGTCGAGCTACGCCACGGTGATTGTCGCTGCATTTG
TTTACGTGTGGCTCACCTACGAAGCCCTCCAGAACCCCATCTCTCAGCAG
GCGTTCTCGAGCGGAATCACCAACCTCGAGGCGTTGACCAAGGGGTTCGG
AGAGGAGGTTTCAGTATCTGCAGCGTGGGCTCACTTTCTGGCACAGGACC
TTTTCATTAACCCCATCTCTCAGCAGGCGTTCTCGAGCGGAATCACCAAC
CTCGAGGCGTTGACCAAGGGGTTCGGAGAGGAGGTTTCAGTATCTGCAGC
GTGGGCTCACTTTCTGGCACAGGACCTTTTCATTGGCCGATGGGTGTATC
TTGATGGGCAGAAGAATGGCATTTTCACCAAGCACAGCCTGGCTCTCTGC
TATCTCTTCGGTCCAATCGGGGTTTTGAGTCACCTGCTTACGCGAACCCT
GTTCAGCGTTGTCAAACCAGGCGTCGCAGACATAATGACGGGCCGATGGG
TGTATCTTGATGGGCAGAAGAATGGCATTTTCACCAAGCACAGCCTGGCT
CTCTGCTATCTCTTCGGTCCAATCGGGGTTTTGAGTCACCTGCTTACGCG
AACCCTGTTCAGCGTTGTCAAACCAGGCGTCGCAGACATAATGACGGTGC
AGACGACAACAGTCAAACCTACTCCTTCAGCAACCTCAGAAGCAAAGAAG
ATGATCGCGTCTGCGAAGAAGGAAGCGGAAGCCATTATCGCCCAGGCGCG
TAAGGACGGTGAATCGCAGGCCTCTTCTTTGCTTCAGGTGCAGACGACAA
CAGTCAAACCTACTCCTTCAGCAACCTCAGAAGCAAAGAAGATGATCGCG
TCTGCGAAGAAGGAAGCGGAAGCCATTATCGCCCAGGCGCGTAAGGACGG
TGAATCGCAGGCCTCTTCTTTGCTTCAGTCTGCTGAGACAGAGGCGCTCG
ACATCCTGAAAGGAGCAGAGGTGGAGCGCTCGGCGCTATTGAAAGCGAAC
AAAACTGAGTCGGAGAAAGATAAAACGAAAGCGGAAGTTTCAACCCAGCC
GACGTCATCAAGCCCAATGCAATCGACATCCACCGACGTTGCTAGCACGT
CGTAATCTGCTGAGACAGAGGCGCTCGACATCCTGAAAGGAGCAGAGGTG
GAGCGCTCGGCGCTATTGAAAGCGAACAAAACTGAGTCGGAGAAAGATAA
AACGAAAGCGGAAGTTTCAACCCAGCCGACGTCATCAAGCCCAATGCAAT
CGACATCCACCGACGTTGCTAGCACGTCGTAA