mRNA_H-paniculata_contig159.3414.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig159.3414.1 vs. uniprot
Match: D7FJ03_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJ03_ECTSI) HSP 1 Score: 123 bits (309), Expect = 6.400e-31 Identity = 60/86 (69.77%), Postives = 71/86 (82.56%), Query Frame = 3
Query: 27 MSFPYHCEVSVTYPSEKLASIACNTLNVDEEIQPENIKRFLQVEGSSLLARFEASEARVLRVVLSSFYDMSSLISRTFLEFDGDGL 284
MSFPYHC+ VT+PS LA+IAC TL VD E+QP I R L+VEGSSLLA+FEA+EAR LRVVLS FYDM+S+++RTFLEFD GL
Sbjct: 1 MSFPYHCDAEVTFPSASLATIACRTLAVDAELQPNKIIRTLRVEGSSLLAKFEATEARTLRVVLSGFYDMASVVARTFLEFDDGGL 86
BLAST of mRNA_H-paniculata_contig159.3414.1 vs. uniprot
Match: A0A2D4BZ60_PYTIN (Uncharacterized protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BZ60_PYTIN) HSP 1 Score: 90.1 bits (222), Expect = 1.300e-18 Identity = 43/82 (52.44%), Postives = 58/82 (70.73%), Query Frame = 3
Query: 24 TMSFPYHCEVSVTYPSEKLASIACNTLNVDEEIQPENIKRFLQVEGSSLLARFEASEARVLRVVLSSFYDMSSLISRTFLEF 269
T + PY CE+++++P + A A T+ VDEE+QPE I R L V GS L+ FEA+E R+LR +SSFYDM+ L+SRT LEF
Sbjct: 2 TATHPYECEIALSFPEAEDAQHAMMTIQVDEELQPEKIHRTLSVNGSDLIVHFEATEIRLLRAAVSSFYDMALLVSRTLLEF 83
BLAST of mRNA_H-paniculata_contig159.3414.1 vs. uniprot
Match: K3WQ75_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WQ75_GLOUD) HSP 1 Score: 85.5 bits (210), Expect = 5.870e-17 Identity = 40/78 (51.28%), Postives = 55/78 (70.51%), Query Frame = 3
Query: 36 PYHCEVSVTYPSEKLASIACNTLNVDEEIQPENIKRFLQVEGSSLLARFEASEARVLRVVLSSFYDMSSLISRTFLEF 269
PY C++S+ +P A+ A TL VD E+QP+ I R L VEG++L+ FEA+E R+LR +SSFYDM L++RT LEF
Sbjct: 6 PYECDISLAFPEAVDAAYALETLRVDAELQPDKITRTLAVEGTNLVVHFEATEIRLLRAAVSSFYDMGLLVARTLLEF 83
BLAST of mRNA_H-paniculata_contig159.3414.1 vs. uniprot
Match: A0A835YW33_9STRA (Transcription factor Pcc1-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YW33_9STRA) HSP 1 Score: 88.2 bits (217), Expect = 1.650e-16 Identity = 41/82 (50.00%), Postives = 62/82 (75.61%), Query Frame = 3
Query: 36 PYHCEVSVTYPSEKLASIACNTLNVDEEIQPENIKRFLQVEGSSLLARFEASEARVLRVVLSSFYDMSSLISRTFLEFDGDG 281
PY C++ + YPSE A+IA ++ VDEE+QP + R L+++G+ L+A+F A+EA+VLRV +S+F D ++L+SRT LEFD G
Sbjct: 5 PYVCKLELRYPSEATAAIAKASMEVDEELQPNKVSRTLELDGNKLMAQFAATEAKVLRVSVSTFCDTAALVSRTMLEFDETG 86
BLAST of mRNA_H-paniculata_contig159.3414.1 vs. uniprot
Match: A0A8K1CRT8_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CRT8_PYTOL) HSP 1 Score: 84.0 bits (206), Expect = 2.160e-16 Identity = 38/78 (48.72%), Postives = 56/78 (71.79%), Query Frame = 3
Query: 36 PYHCEVSVTYPSEKLASIACNTLNVDEEIQPENIKRFLQVEGSSLLARFEASEARVLRVVLSSFYDMSSLISRTFLEF 269
PY C++ +++P + A A T+ VDEE+QP+ I R L V+G+ L+ FEA+E R+LR ++SFYDMS L++RT LEF
Sbjct: 7 PYECDIRLSFPEAEDAEHAMLTIQVDEELQPDKIHRSLSVDGTDLIVHFEATEIRLLRAAVASFYDMSLLVARTLLEF 84
BLAST of mRNA_H-paniculata_contig159.3414.1 vs. uniprot
Match: V9EW72_PHYPR (Uncharacterized protein n=4 Tax=Phytophthora TaxID=4783 RepID=V9EW72_PHYPR) HSP 1 Score: 82.8 bits (203), Expect = 5.610e-16 Identity = 40/78 (51.28%), Postives = 53/78 (67.95%), Query Frame = 3
Query: 36 PYHCEVSVTYPSEKLASIACNTLNVDEEIQPENIKRFLQVEGSSLLARFEASEARVLRVVLSSFYDMSSLISRTFLEF 269
P+ CE+++++P E A TL VDEE+QPE I R L V+G+ L FEA+E R+LR +SSFYDMS L +R LEF
Sbjct: 7 PFECEINLSFPEEVDAQYVLQTLEVDEELQPEKIHRTLTVKGAELHVHFEATEIRLLRAAVSSFYDMSVLTARALLEF 84
BLAST of mRNA_H-paniculata_contig159.3414.1 vs. uniprot
Match: A0A5D6XF77_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XF77_9STRA) HSP 1 Score: 82.0 bits (201), Expect = 1.030e-15 Identity = 39/78 (50.00%), Postives = 55/78 (70.51%), Query Frame = 3
Query: 36 PYHCEVSVTYPSEKLASIACNTLNVDEEIQPENIKRFLQVEGSSLLARFEASEARVLRVVLSSFYDMSSLISRTFLEF 269
P+ C+V + +P+ A A TL VD EIQP+ I R L V+G++L A FEA+E R+LR ++SFYDM+ L++RT LEF
Sbjct: 6 PFECDVQLVFPAPLDAQYALETLQVDGEIQPDKIHRTLAVDGAALTAHFEATEIRLLRAAVASFYDMALLVARTLLEF 83
BLAST of mRNA_H-paniculata_contig159.3414.1 vs. uniprot
Match: A0A3F2S3U4_9STRA (Uncharacterized protein n=2 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2S3U4_9STRA) HSP 1 Score: 82.0 bits (201), Expect = 1.060e-15 Identity = 39/78 (50.00%), Postives = 52/78 (66.67%), Query Frame = 3
Query: 36 PYHCEVSVTYPSEKLASIACNTLNVDEEIQPENIKRFLQVEGSSLLARFEASEARVLRVVLSSFYDMSSLISRTFLEF 269
P+ C+V +T+P E A TL VDEE+QP+ I R L ++G+ L FEA+E R+LR +SSFYDM L +RT LEF
Sbjct: 7 PFECDVCLTFPEEVDAQYVLQTLEVDEELQPDKIHRTLSIKGAELHVHFEATEIRLLRAAVSSFYDMGLLTARTLLEF 84
BLAST of mRNA_H-paniculata_contig159.3414.1 vs. uniprot
Match: W2PBF0_PHYPN (Uncharacterized protein n=5 Tax=Phytophthora parasitica TaxID=4792 RepID=W2PBF0_PHYPN) HSP 1 Score: 82.8 bits (203), Expect = 5.640e-15 Identity = 40/78 (51.28%), Postives = 53/78 (67.95%), Query Frame = 3
Query: 36 PYHCEVSVTYPSEKLASIACNTLNVDEEIQPENIKRFLQVEGSSLLARFEASEARVLRVVLSSFYDMSSLISRTFLEF 269
P+ CE+++++P E A TL VDEE+QPE I R L V+G+ L FEA+E R+LR +SSFYDMS L +R LEF
Sbjct: 96 PFECEINLSFPEEVDAQYVLQTLEVDEELQPEKIHRTLTVKGAELHVHFEATEIRLLRAAVSSFYDMSVLTARALLEF 173
BLAST of mRNA_H-paniculata_contig159.3414.1 vs. uniprot
Match: G4YMJ9_PHYSP (Uncharacterized protein (Fragment) n=3 Tax=Phytophthora TaxID=4783 RepID=G4YMJ9_PHYSP) HSP 1 Score: 74.3 bits (181), Expect = 4.380e-13 Identity = 37/73 (50.68%), Postives = 49/73 (67.12%), Query Frame = 3
Query: 51 VSVTYPSEKLASIACNTLNVDEEIQPENIKRFLQVEGSSLLARFEASEARVLRVVLSSFYDMSSLISRTFLEF 269
+S+T+P E A TL VD+E+QP+ I R L V+G+ L FEA+E R+LR +SSFYDM L +RT LEF
Sbjct: 1 ISLTFPEEVDAQYVLQTLEVDDELQPDKIHRTLTVKGAELHVHFEATEIRLLRAAVSSFYDMGVLAARTLLEF 73 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig159.3414.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig159.3414.1 >prot_H-paniculata_contig159.3414.1 ID=prot_H-paniculata_contig159.3414.1|Name=mRNA_H-paniculata_contig159.3414.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=102bp MSFPYHCEVSVTYPSEKLASIACNTLNVDEEIQPENIKRFLQVEGSSLLAback to top mRNA from alignment at H-paniculata_contig159:3933..7060- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig159.3414.1 ID=mRNA_H-paniculata_contig159.3414.1|Name=mRNA_H-paniculata_contig159.3414.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=3128bp|location=Sequence derived from alignment at H-paniculata_contig159:3933..7060- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig159:3933..7060- >mRNA_H-paniculata_contig159.3414.1 ID=mRNA_H-paniculata_contig159.3414.1|Name=mRNA_H-paniculata_contig159.3414.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=612bp|location=Sequence derived from alignment at H-paniculata_contig159:3933..7060- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |