prot_H-paniculata_contig1589.3411.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig1589.3411.1
Unique Nameprot_H-paniculata_contig1589.3411.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length492
Homology
BLAST of mRNA_H-paniculata_contig1589.3411.1 vs. uniprot
Match: A0A6H5LRB6_9PHAE (RRM domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5LRB6_9PHAE)

HSP 1 Score: 330 bits (845), Expect = 1.880e-105
Identity = 177/260 (68.08%), Postives = 202/260 (77.69%), Query Frame = 0
Query:    1 MAKVIRKDLEAKLQALNGEEWDSMSEDDMSDDDIVTEIIGSTTKEDLTPLPLHIQQKKA--KGKXXXXXXXXXXXSVVPVGPHGEPSGVIYIGHIPHGFYEEAMNGFFGQFGDVVRVRLSRSKKSGRCKGYAYVEFASPEVAGIVASTMNGYFLYNKQLVCRVLKFEEIHPRLFDGSGHKFRKVNWHGLYKQKVNADRTPKEDKQHTKRLLARDYLKRNKLAAKGIDYDFPGFVATLKNREVAEGPFQ-PKPQSGNKTDA 257
            MAKVIR+DLE KL AL G EWDSMSE D+S  +       ++  ++L P PL    KKA  KGK           SVVPVGP GEPSGV+YIGHIPHGFYEEAMNGFF QFGDV+RVR+SRSKKSGRCKGYAYVEFASPEVA IVA TMNGY+L++KQLVCRVLKFEEIHP LFDG+G KFRKVNWHGLY++K NADRT  +D++HT +LL +D  K++KLA  GIDYDFPGFVATLK+R VA+GPFQ PK    NK  A
Sbjct:    1 MAKVIRRDLEQKLAALEGAEWDSMSESDLSGGE-------ASDGDELKPPPLPRHAKKAGRKGKGGG--------SVVPVGPAGEPSGVVYIGHIPHGFYEEAMNGFFKQFGDVIRVRISRSKKSGRCKGYAYVEFASPEVAQIVAETMNGYYLFDKQLVCRVLKFEEIHPNLFDGAGVKFRKVNWHGLYREKYNADRTQVKDEKHTAKLLKKDKAKKDKLAKLGIDYDFPGFVATLKDRNVAKGPFQKPKGAKQNKESA 245          
BLAST of mRNA_H-paniculata_contig1589.3411.1 vs. uniprot
Match: B3S8Q0_TRIAD (RRM domain-containing protein (Fragment) n=1 Tax=Trichoplax adhaerens TaxID=10228 RepID=B3S8Q0_TRIAD)

HSP 1 Score: 170 bits (431), Expect = 1.670e-47
Identity = 76/146 (52.05%), Postives = 107/146 (73.29%), Query Frame = 0
Query:   87 VIYIGHIPHGFYEEAMNGFFGQFGDVVRVRLSRSKKSGRCKGYAYVEFASPEVAGIVASTMNGYFLYNKQLVCRVLKFEEIHPRLFDGSGHKFRKVNWHGLYKQKVNADRTPKEDKQHTKRLLARDYLKRNKLAAKGIDYDFPGFV 232
            VIY+GHIPHGFYEE M GFF QFGD+ ++RLSRSK+SGR +GYA++EF++ +VA IVA TMN Y +  + L C+++K E +HP  F G+  KFRK+NW  L K++ NA +T +E+ +   +L+  + ++R KL   GIDY FPG+V
Sbjct:    1 VIYVGHIPHGFYEEEMKGFFSQFGDINKIRLSRSKRSGRSRGYAFIEFSNQDVATIVAETMNNYMMCGRLLKCQLMKSESVHPETFKGANRKFRKINWRELAKKQANAPKTDQENTKVVNKLIKAENVRRKKLQKLGIDYQFPGYV 146          
BLAST of mRNA_H-paniculata_contig1589.3411.1 vs. uniprot
Match: A0A369RRV5_9METZ (MKI67 FHA domain-interacting nucleolar phosphoprotein-like n=1 Tax=Trichoplax sp. H2 TaxID=287889 RepID=A0A369RRV5_9METZ)

HSP 1 Score: 172 bits (436), Expect = 2.190e-47
Identity = 77/148 (52.03%), Postives = 108/148 (72.97%), Query Frame = 0
Query:   86 GVIYIGHIPHGFYEEAMNGFFGQFGDVVRVRLSRSKKSGRCKGYAYVEFASPEVAGIVASTMNGYFLYNKQLVCRVLKFEEIHPRLFDGSGHKFRKVNWHGLYKQKVNADRTPKEDKQHTKRLLARDYLKRNKLAAKGIDYDFPGFVA 233
            GVIY+GHIPHGFYEE M GFF QFGD+ ++RLSRSK+SGR +GYA++EF++ +VA IVA TMN Y +  + L C+++K E +HP  F G+  KFRK+NW  L K++ NA +T +E+ +   +L+  + ++R KL   GIDY FPG+ A
Sbjct:   48 GVIYVGHIPHGFYEEEMKGFFSQFGDINKIRLSRSKRSGRSRGYAFIEFSNQDVATIVAETMNNYMMCGRLLKCQLMKSESVHPETFKGANRKFRKINWRELAKKQANAPKTDQENTKVVNKLIKAENVRRKKLQKLGIDYQFPGYAA 195          
BLAST of mRNA_H-paniculata_contig1589.3411.1 vs. uniprot
Match: A0A4P9YU86_9FUNG (RRM domain-containing protein (Fragment) n=1 Tax=Syncephalis pseudoplumigaleata TaxID=1712513 RepID=A0A4P9YU86_9FUNG)

HSP 1 Score: 168 bits (425), Expect = 1.630e-46
Identity = 79/148 (53.38%), Postives = 108/148 (72.97%), Query Frame = 0
Query:   86 GVIYIGHIPHGFYEEAMNGFFGQFGDVVRVRLSRSKKSGRCKGYAYVEFASPEVAGIVASTMNGYFLYNKQLVCRVLKFEEIHPRLFDGSGHKFRKVNWHGLYKQKVNADRTPKEDKQHTKRLLARDYLKRNKLAAKGIDYDFPGFVA 233
            GV+Y+G IPHGFYE+ M G+FGQFG V R+RLSR+KK+GR K YA+VEFA  +VA +VA TMN Y L+   L C+V+   ++H RLFDG+  KF+ +  H + +++ N  RTP+E ++HTKRLL ++  KR +L   GIDY FPGFV+
Sbjct:    1 GVVYVGRIPHGFYEDEMRGYFGQFGTVSRLRLSRNKKTGRSKHYAFVEFADADVADVVADTMNNYLLFGHLLKCQVVPAHKVHARLFDGANRKFKPLPLHKMAREEHNRTRTPEEVERHTKRLLRKEQQKRKRLQDAGIDYAFPGFVS 148          
BLAST of mRNA_H-paniculata_contig1589.3411.1 vs. uniprot
Match: A0A197JPK7_9FUNG (FHA domaininteracting nucleolar phospho protein putat n=1 Tax=Linnemannia elongata AG-77 TaxID=1314771 RepID=A0A197JPK7_9FUNG)

HSP 1 Score: 165 bits (417), Expect = 2.240e-44
Identity = 77/154 (50.00%), Postives = 111/154 (72.08%), Query Frame = 0
Query:   85 SGVIYIGHIPHGFYEEAMNGFFGQFGDVVRVRLSRSKKSGRCKGYAYVEFASPEVAGIVASTMNGYFLYNKQLVCRVLKFEEIHPRLFDGSGHKFRKVNWHGLYKQKVNADRTPKEDKQHTKRLLARDYLKRNKLAAKGIDYDFPGFVATLKNR 238
            +GV+Y+G IPHGFYE+ MN +F QFG V+R+RLSR+KK+G+ K YA++EFAS EVA IVA TM+ Y L+  QL C+ L+  +IHP +F G+  KF+ + W  + K+K NA+++  + KQ  K+LL  +  KR KLA  GIDY+FPG+ A ++ +
Sbjct:   68 TGVVYLGRIPHGFYEDQMNAYFSQFGKVLRLRLSRNKKTGKSKHYAFIEFASQEVADIVADTMDNYLLFGHQLKCKALQPTQIHPAMFLGANKKFKAIPWQKISKEKHNAEKSAAQMKQVAKKLLKNESAKRAKLAELGIDYEFPGYKANIQEK 221          
BLAST of mRNA_H-paniculata_contig1589.3411.1 vs. uniprot
Match: A0A7S3XMA8_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XMA8_HETAK)

HSP 1 Score: 164 bits (415), Expect = 5.690e-44
Identity = 103/233 (44.21%), Postives = 141/233 (60.52%), Query Frame = 0
Query:    1 MAKVIRKDLEAKLQALNGEEWDSMSEDDMSDDDIVTEIIGSTTKEDLTPLPLHIQQKKAKGKXXXXXXXXXXXSVVPVGPHGEPSGVIYIGHIPHGFYEEAMNGFFGQFGDVVRVRLSRSKKSGRCKGYAYVEFASPEVAGIVASTMNGYFLYNKQLVCRVLKFEEIHPRLFDGSGHKFRKVNWHGLYKQKVNADRTPKEDKQHTKRLLARDYLKRNKLAAKGIDYDFPGFVA 233
            M+KV+RK+LEAKL +L   EW S SE++  +        GST    ++  P     +K    XXXXXXX             + S V+Y+GHIPHGFYE+ M  FF QFGDV  +RLSRS++ GR +GYA++EF S EVA IVA TM+GYFL +KQL C ++  E++H R+F  S  K +  +W    ++  N  +T K+      RLL ++  KR +LAA GI+YDFPG+ A
Sbjct:    9 MSKVLRKELEAKLASLEDPEWASESENEGDE--------GSTEASKVSNPP---PAEKXXXXXXXXXXX-------------KESAVVYLGHIPHGFYEKEMGSFFDQFGDVKHLRLSRSRRGGRSRGYAFIEFYSAEVAQIVAETMHGYFLEDKQLQCHIVPKEKVHERMFQASCRKLKVEDWQKFAREDHNKPKTQKQMDASVSRLLQKEGKKRRRLAALGIEYDFPGYAA 217          
BLAST of mRNA_H-paniculata_contig1589.3411.1 vs. uniprot
Match: A0A1Y2H203_9FUNG (RRM domain-containing protein n=1 Tax=Lobosporangium transversale TaxID=64571 RepID=A0A1Y2H203_9FUNG)

HSP 1 Score: 167 bits (422), Expect = 1.040e-43
Identity = 79/154 (51.30%), Postives = 109/154 (70.78%), Query Frame = 0
Query:   85 SGVIYIGHIPHGFYEEAMNGFFGQFGDVVRVRLSRSKKSGRCKGYAYVEFASPEVAGIVASTMNGYFLYNKQLVCRVLKFEEIHPRLFDGSGHKFRKVNWHGLYKQKVNADRTPKEDKQHTKRLLARDYLKRNKLAAKGIDYDFPGFVATLKNR 238
            +GV+Y+G IPHGFYEE M  +F QFG V+R+RLSR+KK+G+ K YA++EFAS EVA IVA TMN Y L+  QL C+ L+  +IHP +F G+  KF+ + W  + K+K NA++T  +  Q  K+LL  +  KR KLA  GIDYDFPG+ A++  +
Sbjct:  187 TGVVYLGRIPHGFYEEQMKAYFSQFGKVLRLRLSRNKKTGKSKHYAFIEFASQEVAEIVADTMNNYLLFGHQLKCKALQPSQIHPAMFSGANKKFKAIPWLKIAKEKHNAEKTTVQSNQIKKKLLKNEAAKRAKLAELGIDYDFPGYKASVPEK 340          
BLAST of mRNA_H-paniculata_contig1589.3411.1 vs. uniprot
Match: R1DE27_EMIHU (RRM domain-containing protein n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=R1DE27_EMIHU)

HSP 1 Score: 161 bits (408), Expect = 1.710e-43
Identity = 88/163 (53.99%), Postives = 110/163 (67.48%), Query Frame = 0
Query:   82 GEPSG---VIYIGHIPHGFYEEAMNGFFGQFGDVVRVRLSRSKKSGRCKGYAYVEFASPEVAGIVASTMNGYFLYNKQLVCRVLKFEEIHPRLFDGSGHKFRKVNWHGLYKQKV--NADRTPKEDKQHTKRLLARDYLKRNKLAAKGIDYDFPGFVATLKNRE 239
            G PSG   V+Y+GHIPHGFYEE M GFF QFGDV R+RL+R+KK+G  K YA+VEFA  EVA IVA  MNGY ++ K LVC+V+  E++HP +F GSG  F  VN   L +++V  N  RT  E     K+LLA +  KR KL A GIDY+F G+ A +  RE
Sbjct:   25 GGPSGSGTVLYLGHIPHGFYEEQMRGFFSQFGDVTRLRLARNKKTGASKHYAFVEFAHAEVASIVAQAMNGYLMFTKILVCQVVPDEQLHPNMFKGSGKPFTPVN--RLKRERVAHNKKRTADEATALEKKLLAGERKKRRKLEAAGIDYEFGGYEAAVAQRE 185          
BLAST of mRNA_H-paniculata_contig1589.3411.1 vs. uniprot
Match: A0A2V0P5R3_9CHLO (RRM domain-containing protein n=1 Tax=Raphidocelis subcapitata TaxID=307507 RepID=A0A2V0P5R3_9CHLO)

HSP 1 Score: 160 bits (404), Expect = 8.340e-43
Identity = 76/151 (50.33%), Postives = 103/151 (68.21%), Query Frame = 0
Query:   85 SGVIYIGHIPHGFYEEAMNGFFGQFGDVVRVRLSRSKKSGRCKGYAYVEFASPEVAGIVASTMNGYFLYNKQLVCRVLKFEEIHPRLFDGSGHKFRKVNWHGLYKQKVNADRTPKEDKQHTKRLLARDYLKRNKLAAKGIDYDFPGFVATL 235
            S V+YIGH+PHGFYE  + GFF QFG + RVR+SRSKK+GR K YA++EFA PEVA I A  M G+F++ ++L  R LK  E+HP LF G+  KF++V W  +  ++ N DRTP+E      +LL RD  +R ++ A GIDY++ G  A L
Sbjct:   41 SNVVYIGHLPHGFYERELLGFFSQFGRLTRVRVSRSKKTGRAKHYAFLEFAVPEVARIAAEAMEGHFMFAQRLSVRCLKRREVHPELFKGANRKFKQVPWRKIEAERHNRDRTPQEHAARVAKLLRRDRKRRERIRAAGIDYEYDGLEAAL 191          
BLAST of mRNA_H-paniculata_contig1589.3411.1 vs. uniprot
Match: A0A086TK93_9FUNG (RRM domain-containing protein n=1 Tax=Podila verticillata NRRL 6337 TaxID=1069443 RepID=A0A086TK93_9FUNG)

HSP 1 Score: 164 bits (414), Expect = 3.910e-42
Identity = 78/151 (51.66%), Postives = 109/151 (72.19%), Query Frame = 0
Query:   85 SGVIYIGHIPHGFYEEAMNGFFGQFGDVVRVRLSRSKKSGRCKGYAYVEFASPEVAGIVASTMNGYFLYNKQLVCRVLKFEEIHPRLFDGSGHKFRKVNWHGLYKQKVNADRTPKEDKQHTKRLLARDYLKRNKLAAKGIDYDFPGFVATL 235
            +GV+Y+G IPHGFYEE M  +F QFG V+R+RLSR+KK+G+ K YA++EFAS EVA IVA TM+ Y L+  QL C+ L+  +IHP +F G+  KF+ + W  + K K NAD++  + KQ +K+LL  +  KR KLA  GI+YDFPG+ A++
Sbjct:  229 TGVVYLGRIPHGFYEEQMQAYFTQFGKVLRLRLSRNKKTGKSKHYAFIEFASQEVADIVADTMDNYLLFGHQLKCKALQPSQIHPAMFVGANKKFKAIPWQKISKDKHNADKSASQIKQVSKKLLKNESAKRAKLADLGIEYDFPGYKASV 379          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig1589.3411.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5LRB6_9PHAE1.880e-10568.08RRM domain-containing protein n=2 Tax=Ectocarpus T... [more]
B3S8Q0_TRIAD1.670e-4752.05RRM domain-containing protein (Fragment) n=1 Tax=T... [more]
A0A369RRV5_9METZ2.190e-4752.03MKI67 FHA domain-interacting nucleolar phosphoprot... [more]
A0A4P9YU86_9FUNG1.630e-4653.38RRM domain-containing protein (Fragment) n=1 Tax=S... [more]
A0A197JPK7_9FUNG2.240e-4450.00FHA domaininteracting nucleolar phospho protein pu... [more]
A0A7S3XMA8_HETAK5.690e-4444.21Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A1Y2H203_9FUNG1.040e-4351.30RRM domain-containing protein n=1 Tax=Lobosporangi... [more]
R1DE27_EMIHU1.710e-4353.99RRM domain-containing protein n=1 Tax=Emiliania hu... [more]
A0A2V0P5R3_9CHLO8.340e-4350.33RRM domain-containing protein n=1 Tax=Raphidocelis... [more]
A0A086TK93_9FUNG3.910e-4251.66RRM domain-containing protein n=1 Tax=Podila verti... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000504RNA recognition motif domainSMARTSM00360rrm1_1coord: 87..160
e-value: 8.2E-18
score: 75.2
IPR000504RNA recognition motif domainPFAMPF00076RRM_1coord: 88..157
e-value: 2.9E-13
score: 49.4
IPR000504RNA recognition motif domainPROSITEPS50102RRMcoord: 86..157
score: 14.385
IPR012677Nucleotide-binding alpha-beta plait domain superfamilyGENE3D3.30.70.330coord: 8..166
e-value: 8.2E-20
score: 73.3
NoneNo IPR availablePANTHERPTHR46754FAMILY NOT NAMEDcoord: 65..310
NoneNo IPR availablePANTHERPTHR46754:SF1MKI67 FHA DOMAIN-INTERACTING NUCLEOLAR PHOSPHOPROTEINcoord: 65..310
IPR035979RNA-binding domain superfamilySUPERFAMILY54928RNA-binding domain, RBDcoord: 75..169

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig1589contigH-paniculata_contig1589:16065..23922 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig1589.3411.1mRNA_H-paniculata_contig1589.3411.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig1589 15909..25339 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig1589.3411.1 ID=prot_H-paniculata_contig1589.3411.1|Name=mRNA_H-paniculata_contig1589.3411.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=492bp
MAKVIRKDLEAKLQALNGEEWDSMSEDDMSDDDIVTEIIGSTTKEDLTPL
PLHIQQKKAKGKKGGGGVAAGGGSVVPVGPHGEPSGVIYIGHIPHGFYEE
AMNGFFGQFGDVVRVRLSRSKKSGRCKGYAYVEFASPEVAGIVASTMNGY
FLYNKQLVCRVLKFEEIHPRLFDGSGHKFRKVNWHGLYKQKVNADRTPKE
DKQHTKRLLARDYLKRNKLAAKGIDYDFPGFVATLKNREVAEGPFQPKPQ
SGNKTDATELKIRKTSDATADNATTVNMDEVVPDAATAQSEVVVGDGQKA
KTPSKKKKINAETSEEKGKKENVENSGETKRSEENSGETKGNGEKSKLKM
GNAKKTKGKKGNAENSEKGNAKNSEKKGNAKNSEKKGNAKNSEKEGNAKN
SEKKGNAKNSEKEGSAKNSDKKGNAKNSEKEGSREKFRKEGKCEKFREGE
KREKFRKKGKREKFRAGGKCEKFCAGGKREKFQKKGKCDKF*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000504RRM_dom
IPR012677Nucleotide-bd_a/b_plait_sf
IPR035979RBD_domain_sf