mRNA_H-paniculata_contig15882.3407.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	mRNA_H-paniculata_contig15882.3407.1
Unique Name	mRNA_H-paniculata_contig15882.3407.1
Type	mRNA
Organism	Halopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)

Homology

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BLAST of mRNA_H-paniculata_contig15882.3407.1 vs. uniprot
Match: A0A6H5K1D8_9PHAE (MCM domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1D8_9PHAE)

HSP 1 Score: 301 bits (771), Expect = 6.760e-88
Identity = 182/259 (70.27%), Postives = 198/259 (76.45%), Query Frame = 2

Query:  182 KGTYD----MTVNTAIYSPLLSRFDFVLLLLDTKN---KEWDKVVFTFVLRAAIGPATPPA--PARKTRSTREANADDTSQGNASSTRSVSGGRSGSGRGRGNAEEGPVSSKPWGTEKLQKYLCYVRDTYTSVQLTKDAEVVVAKYYQSQRSADNRSAARTTVRLLESLIRLAQTHAKLMCRTQVTLQDAVVSVIYVETSLHSTAQLGMESVLHSDFPPNPDEEFEIQQGLILDRLGLSHFHRPRGPPQPPPLSGETSR 931
            KGTYD    MTVNTAI SPLLSRFD VLLLLDTKN   K+WDKVV TFVLRAAIGPA PP    A   R+   A    +S     S+ S +G +  +G   G  EE PVSSKPWGTEKLQKYLCYV+DT+TSV+L+KDAE VV KYYQSQRSADNRSAARTTVRLLESLIRLAQ HA+LMCRT+VTLQDAVVSVI VETSLHSTAQLG++SVLHSDFPPNPDEEFE+QQGLILDRL L           PPPL   T R
Sbjct:   80 KGTYDAAQDMTVNTAIGSPLLSRFDLVLLLLDTKNEDNKQWDKVVSTFVLRAAIGPAAPPVRPKAVAARAATVAPRGGSSGXXGPSSPSQAG-KPTAGGPAGRGEEEPVSSKPWGTEKLQKYLCYVKDTFTSVRLSKDAEEVVGKYYQSQRSADNRSAARTTVRLLESLIRLAQAHARLMCRTEVTLQDAVVSVICVETSLHSTAQLGVDSVLHSDFPPNPDEEFELQQGLILDRLKLRS---------PPPLPFVTRR 328

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BLAST of mRNA_H-paniculata_contig15882.3407.1 vs. uniprot
Match: D8LM73_ECTSI (MCM domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LM73_ECTSI)

HSP 1 Score: 302 bits (773), Expect = 1.150e-86
Identity = 174/237 (73.42%), Postives = 188/237 (79.32%), Query Frame = 2

Query:  182 KGTYD----MTVNTAIYSPLLSRFDFVLLLLDTKNKEWDKVVFTFVLRAAIGPATPP----APARKTRSTREANADDTSQGNASSTRSVSGGRSGSGRGRGNAEEGPVSSKPWGTEKLQKYLCYVRDTYTSVQLTKDAEVVVAKYYQSQRSADNRSAARTTVRLLESLIRLAQTHAKLMCRTQVTLQDAVVSVIYVETSLHSTAQLGMESVLHSDFPPNPDEEFEIQQGLILDRLGL 868
            KGTYD    MTVNTAI SPLLSRFD VLLLLDTKNK+WDKVV TFVLRAAIGPA PP    A A KT +                 +    G+  +G   G  EE PVSSKPWGTEKLQKYLCYV+DT+TSV+L+KDAE VV KYYQSQRSADNRSAARTTVRLLESLIRLAQ HA+LMCRT+VTLQDAVVSVI VETSLHSTAQLG++SVLHSDFPPNPDEEFE+QQGLILDRL L
Sbjct:  467 KGTYDAAEDMTVNTAIGSPLLSRFDLVLLLLDTKNKQWDKVVSTFVLRAAIGPAAPPVRPKAVAAKTAAVAPRGXXXXXXXXXXXXQP---GKPAAGGPAGRGEEEPVSSKPWGTEKLQKYLCYVKDTFTSVRLSKDAEEVVGKYYQSQRSADNRSAARTTVRLLESLIRLAQAHARLMCRTEVTLQDAVVSVICVETSLHSTAQLGVDSVLHSDFPPNPDEEFELQQGLILDRLKL 700

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BLAST of mRNA_H-paniculata_contig15882.3407.1 vs. uniprot
Match: A0A6H5JX13_9PHAE (MCM domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JX13_9PHAE)

HSP 1 Score: 235 bits (599), Expect = 6.350e-65
Identity = 157/291 (53.95%), Postives = 170/291 (58.42%), Query Frame = 2

Query:  182 KGTYD----MTVNTAIYSPLLSRFDFVLLLLDTK--------------------------------------NKEWDKVVFTFVLRAAIGPATPPAPARKTRSTREANAD-DTSQGNASSTRSVSGGRSGSGRGRGNAEEGPVSSKPWGTEKLQKYLCYVRDTYTSVQLTKDAEV----------------------------------VVAKYYQSQRSADNRSAARTTVRLLESLIRLAQTHAKLMCRTQVTLQDAVVSVIYVETSLHSTAQLGMESVLHSDFPPNPDE 823
            KGTYD    MTVNTAI SPLLSRF  VLLLLDTK                                      NK+WDKVV TFVLRAAIGPA PP   +   +     A  D S            G+  +G   G  EE PVSSKPWGTEKLQKYLCYV+DT+TSV+L+KDAEV                                  V   YYQ QRSADNRSAARTTVRLLESLIRLAQ HA+LMCRT+VTLQDAVVSVI VETSLHSTAQLG++SVLHSDFPPNPDE
Sbjct:   80 KGTYDAAEDMTVNTAIGSPLLSRFALVLLLLDTKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDNKQWDKVVSTFVLRAAIGPAAPPVRPKAVAARAATVAPRDGSSXXXXXXXXXQAGKPAAGGPAGRGEEEPVSSKPWGTEKLQKYLCYVKDTFTSVRLSKDAEVRDRDHYRTVKTSVCGWHGFCRTLCTCRIRRSRAGVAGIYYQIQRSADNRSAARTTVRLLESLIRLAQAHARLMCRTEVTLQDAVVSVICVETSLHSTAQLGVDSVLHSDFPPNPDE 370

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BLAST of mRNA_H-paniculata_contig15882.3407.1 vs. uniprot
Match: D7G551_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G551_ECTSI)

HSP 1 Score: 172 bits (436), Expect = 2.000e-42
Identity = 89/100 (89.00%), Postives = 95/100 (95.00%), Query Frame = 2

Query:  569 AEVVVAKYYQSQRSADNRSAARTTVRLLESLIRLAQTHAKLMCRTQVTLQDAVVSVIYVETSLHSTAQLGMESVLHSDFPPNPDEEFEIQQGLILDRLGL 868
            A+ VV KYYQSQRSADNRSAARTTVRLLESLIRLAQ HA+LMCRT+VTLQDAVVSVI VETSLHSTAQLG++SVLHSDFPPNPDEEFE+QQGLILDRL L
Sbjct:  200 AQEVVGKYYQSQRSADNRSAARTTVRLLESLIRLAQAHARLMCRTEVTLQDAVVSVICVETSLHSTAQLGVDSVLHSDFPPNPDEEFELQQGLILDRLKL 299

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BLAST of mRNA_H-paniculata_contig15882.3407.1 vs. uniprot
Match: A0A7S2WCY2_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WCY2_9STRA)

HSP 1 Score: 169 bits (428), Expect = 2.900e-40
Identity = 114/271 (42.07%), Postives = 151/271 (55.72%), Query Frame = 2

Query:  182 KGTYDMT----VNTAIYSPLLSRFDFVLLLLDTKNKEWDKVVFTFVLRAAIGPATP-PAPARKTRSTREANADDTSQGNASSTRSVSGGRSGSGRGRGNAEEGPVS------------------SKPWGTEKLQKYLCYVRDTYTSVQLTKDAEVVVAKYYQSQRSADNRSAARTTVRLLESLIRLAQTHAKLMCRTQVTLQDAVVSVIYVETSLHSTAQLGMESVLHSDFPPNPDEEFEIQQGLILDRLGLSHFHRPRGP-----PQPPP 910
            KGTYDM+    VNTAI SPLLSRFD VL+LLDT + EWD+VV TFVLR A G     P PA  + + +                          R RG+   GP S                  + PW  +KLQKY+  VR+ +   QLT DA  V+  Y+Q QR + +R+ ARTTVR+LESLIRL + HA+LM + + T+QDAVV+V  VE S+ +++ L ++S LH+DFP NPD+   I + L+LD+L L    +   P      QPPP
Sbjct:  513 KGTYDMSEDISVNTAIASPLLSRFDIVLVLLDTSHMEWDRVVSTFVLRDACGMTNKRPKPAGLSATAKR-------------------------RRRGSVSGGPESRAAEPCDPEAFDELYGPGTTPWSMDKLQKYIATVRECFQP-QLTADARRVLTTYWQKQRQSADRNVARTTVRMLESLIRLTEAHARLMFKHEATVQDAVVAVCLVEMSMMTSSLLQLDSALHTDFPDNPDDHESIVERLVLDKLQLHDLGQQTAPGSRAVAQPPP 757

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BLAST of mRNA_H-paniculata_contig15882.3407.1 vs. uniprot
Match: A0A425C685_9STRA (MCM domain-containing protein n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A425C685_9STRA)

HSP 1 Score: 169 bits (427), Expect = 5.420e-40
Identity = 107/246 (43.50%), Postives = 147/246 (59.76%), Query Frame = 2

Query:  173 GRNKGTYDMTVNTAIYSPLLSRFDFVLLLLDTKNKEWDKVVFTFVLRAAIGPATPPAPARKTRSTREANADDTSQGNASSTRSVSGGRSGSGRGRGNAEEGPVSSKP------WGTEKLQKYLCYVRDTYTSVQLTKDAEVVVAKYYQSQRSADNRSAARTTVRLLESLIRLAQTHAKLMCRTQVTLQDAVVSVIYVETSLHST-----AQLGMESVLHSDFPPNPDEEFEIQQGLILDRLGLSHF 877
            GR   T D++VNT+I SPLLSRFD +L+LLD  NK WD V+ +F+L+ A+G          T    EA   +    N S+ +SV               + P SS P      W  + LQ Y+CYV+D Y   QL++ A  ++ +YYQ QR++D+RSAARTT+RLLESL RLAQ HA+LMC ++V + DAVV+V  +E S  +       + G+ESVLHS+F  NP EE+ +Q+ L+LD L L  F
Sbjct:  612 GRYDPTKDVSVNTSIASPLLSRFDLILVLLDRVNKRWDNVISSFILKQAVG--------TNTSVKEEAEYHE----NESAFKSVD-------------RQEPRSSAPEEGPSVWSIQTLQAYICYVKDKYQP-QLSRAAMTILQRYYQRQRASDSRSAARTTIRLLESLTRLAQAHARLMCHSEVAVMDAVVAVFVMEVSKSTDNCSDMLEGGVESVLHSNFSENPQEEYLLQEKLVLDYLMLQEF 831

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BLAST of mRNA_H-paniculata_contig15882.3407.1 vs. uniprot
Match: F4PCX6_BATDJ (MCM domain-containing protein n=2 Tax=Batrachochytrium dendrobatidis TaxID=109871 RepID=F4PCX6_BATDJ)

HSP 1 Score: 166 bits (420), Expect = 9.510e-40
Identity = 100/234 (42.74%), Postives = 133/234 (56.84%), Query Frame = 2

Query:  182 KGTYD----MTVNTAIYSPLLSRFDFVLLLLDTKNKEWDKVVFTFVLRAAIGPATPPAPARKTRSTREANADDTSQGNASSTRSVSGGRSGSGRGRGNAEEGPVSSKPWGTEKLQKYLCYVRDTYTSVQLTKDAEVVVAKYYQSQRSADNRSAARTTVRLLESLIRLAQTHAKLMCRTQVTLQDAVVSVIYVETSLHSTAQLGMESVLHSDFPPNPDEEFEIQQGLILDRLGLS 871
            KG YD    + VN A+ SPLLSRFD +LLLLDT+N EWDKVV +F+L   I    PP  A                                                W  E LQ Y+CY+++TY   +LT +A  V+ KYYQ QR  D +++ARTT+RLLESLIRLAQ HA+LMCR  V + DA+++V  VE S+HS A LG  S LH+ FP +P++++   +G+I+DRLGL+
Sbjct:  470 KGKYDPKQGVEVNIALASPLLSRFDLILLLLDTQNPEWDKVVSSFILDTEIS-GKPPVEA--------------------------------------------VGDLWDHECLQSYICYIKETYMP-KLTPEANDVLKKYYQLQRGGDLQNSARTTIRLLESLIRLAQAHARLMCRHDVRVMDAIIAVSIVEASIHSMALLGSTSTLHAPFPTDPEQDYARIEGIIMDRLGLA 657

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BLAST of mRNA_H-paniculata_contig15882.3407.1 vs. uniprot
Match: H3GDF8_PHYRM (MCM domain-containing protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GDF8_PHYRM)

HSP 1 Score: 168 bits (425), Expect = 1.200e-39
Identity = 109/263 (41.44%), Postives = 152/263 (57.79%), Query Frame = 2

Query:  173 GRNKGTYDMTVNTAIYSPLLSRFDFVLLLLDTKNKEWDKVVFTFVLRAAIGPATPPAPARKTRSTREANADDTSQGNASSTRSVSGGRSGSGRGRGNAEEGPVSSKPWGTEKLQKYLCYVRDTYTSVQLTKDAEVVVAKYYQSQRSADNRSAARTTVRLLESLIRLAQTHAKLMCRTQVTLQDAVVSVIYVETSLHST-----AQLGMESVLHSDFPPNPDEEFEIQQGLILDRLGLSHFH-------RPRGPP---QPPPLS 916
            GR   T D++VNT+I SPLLSRFD +L+LLD  N  WD+VV +F+L+ ++G  T        +   E + D+ S G   S    S                   S  W   KLQ Y+C+V+D Y   QLT+ A  ++ +YYQ QR++D+RSAARTT+RLLESL R+AQ HA+LMC ++V + DAVV+V  +E S  +       + G ESVLHS+F  NP+EE+ +Q+ L+LD L L           +P GPP   +P P+S
Sbjct:  824 GRYDPTTDVSVNTSIASPLLSRFDLILVLLDRMNSRWDQVVSSFILKQSVGTNT------SLKEEAERDEDEPSFGGVGSDWQDS-----------RTSASKDDSLHWSIPKLQAYICHVKDKYQP-QLTRGAMSILQRYYQRQRASDSRSAARTTIRLLESLTRIAQAHARLMCHSEVEIMDAVVAVFVMEVSKSTDNCSEMLEGGAESVLHSNFSENPEEEYALQEKLVLDYLMLQELSTANSSQSQPSGPPSQRRPAPVS 1068

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BLAST of mRNA_H-paniculata_contig15882.3407.1 vs. uniprot
Match: A0A024TXJ7_9STRA (MCM domain-containing protein n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TXJ7_9STRA)

HSP 1 Score: 165 bits (417), Expect = 1.290e-39
Identity = 109/255 (42.75%), Postives = 145/255 (56.86%), Query Frame = 2

Query:  173 GRNKGTYDMTVNTAIYSPLLSRFDFVLLLLDTKNKEWDKVVFTFVLRAAIGPATPPAPARKTRSTREANADDTSQGNASSTRSVSGGRSGSGRGRGNAEEGPV--SSKPWGTEKLQKYLCYVRDTYTSVQLTKDAEVVVAKYYQSQRSADNRSAARTTVRLLESLIRLAQTHAKLMCRTQVTLQDAVVSVIYVETSLHSTAQLGMESVLHSDFPPNPDEEFEIQQGLILDRLGLSHFHRPRGPPQPPPLSGETSR 931
            GR     D++VNTAI SPLLSRFD +L+LLDT  KEWD+ V +F+L  A                           +A S RS       S RG G A  GP       W   KLQ Y CYV++T+   +L++ A  V+ +YYQ QRS+D R+AARTT+RLLESL R++Q HAKLMCR++V++QDAVV+V   ETS  + + LG ESVLH  F P+P  E+   + +IL +L L+       P   P  +G+  R
Sbjct:  338 GRYDPNADVSVNTAIASPLLSRFDIILVLLDTVQKEWDERVSSFILDQAAA-------------------------SAESFRS-------SPRGDG-APRGPQRPDRTRWSIAKLQAYFCYVKETFQP-RLSRSAMTVLQRYYQLQRSSDMRNAARTTIRLLESLTRISQAHAKLMCRSEVSVQDAVVAVYITETSKSADSMLGYESVLHKSFSPDPTTEYYQHEEVILSQLSLTELSTKPPPHDRPTTTGDCQR 558

[Close]

BLAST of mRNA_H-paniculata_contig15882.3407.1 vs. uniprot
Match: A0A835Z090_9STRA (MCM2/3/5 family-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z090_9STRA)

HSP 1 Score: 167 bits (423), Expect = 1.720e-39
Identity = 144/414 (34.78%), Postives = 185/414 (44.69%), Query Frame = 2

Query:  182 KGTYDM----TVNTAIYSPLLSRFDFVLLLLDTKNKEWDKVVFTFVLRAAIGPATPPAPARKTRSTREANADDTSQGNASSTRSVSGGRSGSGRGRGNAEEG-PVSS---KPWGTEKLQKYLCYVRDTYTSVQLTKDAE-------------------------------------------------------------------------VVVAKYYQSQRSADNRSAARTTVRLLESLIRLAQTHAKLMCRTQVTLQDAVVSVIYVETSLHSTAQLGMESVLHSDFPPNPDEEFEIQQGLILDRLGLSHFHRPRGPPQPPPLSGETSREHSQT---FREQSLNGSSNNR-----WAEFGAAAAASRFGLKRPREPVDDWVGGDPQEGGNGVVVGGXXXNGNGWGDMLVMSQ 1156
            KGTYDM    T NTAI SPLLSRFD VLLLLDTK+  WD++V  FVL  A+G                                      G G   G+ ++G P SS   +PW  ++LQ+Y+ +V++T+ +V+LT+DAE                                                                          V++ YYQ QR  DN++A RTTVRLLESLIRLAQ HA+LM R +V L DAV SV  VETSLHS   LG  SV+HS FP + D +F+++Q LILDRLGL+H         PPP + +  R H Q      ++ + GS         W++ G          KRP     D  GGD   GG  V   G   +   W D+  MSQ
Sbjct:  632 KGTYDMDESVTSNTAIGSPLLSRFDLVLLLLDTKDPAWDQMVSEFVLIQAVGAGR-----------------------------------GGGASDGSDQQGRPASSDGARPWSIDRLQRYMAWVKETHPTVRLTEDAEQNGGFGRVAHCVQRLRPVHVRLAAAAYGLGEEQRDGSAVLAMQAARLLEHCCCRIALRHALAPWRLFSGGERVAVLSSYYQHQRRCDNKAAPRTTVRLLESLIRLAQAHARLMGRGEVALADAVQSVACVETSLHSCNLLGPNSVMHSGFPVDADAQFKMEQRLILDRLGLNHLGG-----DPPPTAPDNGRGHYQGGPGTPQRQVGGSQGGGPQQGGWSQLG----------KRPAADAYDGGGGD---GGRRVRPAGGGRSA--WPDVYRMSQ 990

The following BLAST results are available for this feature:

BLAST of mRNA_H-paniculata_contig15882.3407.1 vs. uniprot

BLAST of mRNA_H-paniculata_contig15882.3407.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A6H5K1D8_9PHAE	6.760e-88	70.27	MCM domain-containing protein n=1 Tax=Ectocarpus s...	[more]
D8LM73_ECTSI	1.150e-86	73.42	MCM domain-containing protein n=1 Tax=Ectocarpus s...	[more]
A0A6H5JX13_9PHAE	6.350e-65	53.95	MCM domain-containing protein n=1 Tax=Ectocarpus s...	[more]
D7G551_ECTSI	2.000e-42	89.00	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
A0A7S2WCY2_9STRA	2.900e-40	42.07	Hypothetical protein n=1 Tax=Rhizochromulina marin...	[more]
A0A425C685_9STRA	5.420e-40	43.50	MCM domain-containing protein n=1 Tax=Peronospora ...	[more]
F4PCX6_BATDJ	9.510e-40	42.74	MCM domain-containing protein n=2 Tax=Batrachochyt...	[more]
H3GDF8_PHYRM	1.200e-39	41.44	MCM domain-containing protein n=1 Tax=Phytophthora...	[more]
A0A024TXJ7_9STRA	1.290e-39	42.75	MCM domain-containing protein n=2 Tax=Aphanomyces ...	[more]
A0A835Z090_9STRA	1.720e-39	34.78	MCM2/3/5 family-domain-containing protein n=1 Tax=...	[more]

Pages

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-paniculata_contig15882	contig	H-paniculata_contig15882:21..5309 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous	2021-02-24

Properties


Property Name	Value
Taxonomic scope	Eukaryota
Seed ortholog score	309.3
Seed ortholog evalue	2.3e-81
Seed eggNOG ortholog	2880.D8LM73
Preferred name	MCM9
KEGG ko	ko:K10738
Hectar predicted targeting category	other localisation
GOs	GO:0000724,GO:0000725,GO:0005575,GO:0006139,GO:0006259,GO:0006281,GO:0006302,GO:0006310,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009987,GO:0032991,GO:0033554,GO:0034641,GO:0042555,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0097362,GO:1901360
EggNOG free text desc.	DNA replication initiation
EggNOG OGs	COG1241@1,KOG0477@2759
EC	3.6.4.12
COG Functional cat.	L
Best tax level	Eukaryota
Best eggNOG OG	NA\|NA\|NA
BRITE	ko00000,ko01000,ko03032
Exons	9
Model size	2087
Cds size	1050
Stop	1
Start	1

Relationships

The following UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1622929267.2373173-UTR-H-paniculata_contig15882:20..118	1622929267.2373173-UTR-H-paniculata_contig15882:20..118	Halopteris paniculata Hal_grac_a_UBK monoicous	UTR	H-paniculata_contig15882 21..118 +
1691480793.8600821-UTR-H-paniculata_contig15882:20..118	1691480793.8600821-UTR-H-paniculata_contig15882:20..118	Halopteris paniculata Hal_grac_a_UBK monoicous	UTR	H-paniculata_contig15882 21..118 +
1622929267.2490401-UTR-H-paniculata_contig15882:478..519	1622929267.2490401-UTR-H-paniculata_contig15882:478..519	Halopteris paniculata Hal_grac_a_UBK monoicous	UTR	H-paniculata_contig15882 479..519 +
1691480793.870903-UTR-H-paniculata_contig15882:478..519	1691480793.870903-UTR-H-paniculata_contig15882:478..519	Halopteris paniculata Hal_grac_a_UBK monoicous	UTR	H-paniculata_contig15882 479..519 +
1622929267.3755682-UTR-H-paniculata_contig15882:4411..5309	1622929267.3755682-UTR-H-paniculata_contig15882:4411..5309	Halopteris paniculata Hal_grac_a_UBK monoicous	UTR	H-paniculata_contig15882 4412..5309 +
1691480793.967444-UTR-H-paniculata_contig15882:4411..5309	1691480793.967444-UTR-H-paniculata_contig15882:4411..5309	Halopteris paniculata Hal_grac_a_UBK monoicous	UTR	H-paniculata_contig15882 4412..5309 +

The following CDS feature(s) are a part of this mRNA:

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
mRNA_H-paniculata_contig15882.3407.1	prot_H-paniculata_contig15882.3407.1	Halopteris paniculata Hal_grac_a_UBK monoicous	polypeptide	H-paniculata_contig15882 520..4411 +

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at H-paniculata_contig15882:21..5309+
coding sequence from alignment at H-paniculata_contig15882:21..5309+

protein sequence of mRNA_H-paniculata_contig15882.3407.1

>prot_H-paniculata_contig15882.3407.1 ID=prot_H-paniculata_contig15882.3407.1|Name=mRNA_H-paniculata_contig15882.3407.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=350bp
MYIFHPHQCCTGRNKGTYDMTVNTAIYSPLLSRFDFVLLLLDTKNKEWDK
VVFTFVLRAAIGPATPPAPARKTRSTREANADDTSQGNASSTRSVSGGRS
GSGRGRGNAEEGPVSSKPWGTEKLQKYLCYVRDTYTSVQLTKDAEVVVAK
YYQSQRSADNRSAARTTVRLLESLIRLAQTHAKLMCRTQVTLQDAVVSVI
YVETSLHSTAQLGMESVLHSDFPPNPDEEFEIQQGLILDRLGLSHFHRPR
GPPQPPPLSGETSREHSQTFREQSLNGSSNNRWAEFGAAAAASRFGLKRP
REPVDDWVGGDPQEGGNGVVVGGGGGNGNGWGDMLVMSQRPDKISTPYR*

mRNA from alignment at H-paniculata_contig15882:21..5309+

Legend: UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_H-paniculata_contig15882.3407.1 ID=mRNA_H-paniculata_contig15882.3407.1|Name=mRNA_H-paniculata_contig15882.3407.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=5289bp|location=Sequence derived from alignment at H-paniculata_contig15882:21..5309+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
AGTCGGGCCTTCGGGTAACCGACACACGAACCCGGTTTCGGGGTAAGTGT
TGGGCAAAGGTTTCCTCCCGTCCTTTCAAGGAAAAAAAATAATAATAATC
ACAATGGGGGTAGCTAGGCCCCAGAAAATGCTATCAAGAGCAATCCGAAC
ATCAGTAAACAATGACTTCAAGAGCTGTGTGCGGGTACATTTTGTCCCAT
ATCTACTTTCCAAGTGTTCGCTTCCTGCAATTGTTCGCTGCTTGGCTCGC
AGTATATTTCACCCCCATTCCTATGGATATTAAGTAGGGTGTCTAGCAAG
ATCTCTGAGTGTTGAAGCATCCCCATACCCCCAGCAATATGATGCCTCTC
GTGTATCCTTTCCCACCAACCTTCGTTACAGTAGCACCACATCAAATGCA
CATTAGCCACCGGCAGTCATTGTTACCCAAATGGTATAGCAAATTCTCTC
CCCCTGAGATGATTAACCCCGCCGTCTGCGTGATGAAGCGGTCGGGTATA
TGTACATATTCCATCCACATCAATGTTGCACCGGACGAAACAAGGGTACT
TACGACATGACCGAAGATATGACGGTGAACACGGCTATCTACAGCCCTCT
TCTCTCGCGATTCGACTTCGTCCTGCTCTTGCTTGACACCAAGAACAAGG
TAAAACGTTGAAAGGTGGCTGCTGTCATGTGTAGGCGCCGTCAGCGCTTG
TTGTATTTTGTTAGCCTGTATGTTTTTTCGTTGAAAATAGTTGTCTCTGT
CCCTGACTCCGTCTTTGTCTCTCTCTTCTCCGTGCCTGCCCATATTTATA
CATGTGCATGTGAGAGACAGAGAAGGCACGGAGATGTATCGCAAACGTGA
AAAACGTATATCAAGCGGGCAAGATTCAGCCGTATTCCAGGCACATCCAA
CGGTTGTATTGCATGGAAAGCCTTACCGCAATATTGCAGACGTGCCCAAA
TCTCAAGAGTGTTTCAACCCTCACAACCCATTGGTTTCAGAAATGCAGTA
CCAATGGTCTCCTCTGGTTTTTTATCCAATTGGTAGGCATTTCTTGTTAT
TATACAAAACCATCTCAATGCATCTCAGCGGTCAACTAACGTGCTGACGT
TGGTCGGTTGTACTGTAGTGCGGTAGGGTCTTACGGTGACAATCCATTTT
TTGAAACAGTAATTCCCGCCCTCTGCTGCCGGTTCGGGTACTACCTCCCT
GCGTTTCCAACGTCTGGGCAGGAATGGGATAAGGTTGTGTTCACGTTCGT
GCTGAGAGCAGCTATCGGGCCGGCAACCCCCCCAGCGCCTGCGAGAAAAA
CCCGCTCCACACGAGAAGCTAATGCTGACGATACTAGTCAAGGTAGGGGT
TTCCTATCCACATGTTTGAGTAGAGTGAGCACAGTCAAAGTTCCTTCGAC
TCAACCCAACCCCATTACTGCTGCTGCCGCCGCCTCTGTCCTGCCTACTA
ATGTTCTCCTTACCACGCTTCTCTCAGCTATGCATGCATGATCCGCGAAG
GCTGGTAAAGGAGGAACCTTTAGTTTTACGTCAGTTTTTGTGATAAAGCA
TTGTCGTCGTCTTCTTCGTCATGGGAAAAATCGAGTTAGTGCGGTTAGCG
TTGGCTAGACTTATCTTTCCCATGTGTACTTGTTTCGCAGGATCGCTCGG
CTGCTTGTTCTCAAGCGAACATACCACACACGCGTGACAGGGAACGCCTC
TTCAACGAGATCTGTGAGCGGGGGACGAAGCGGGAGTGGGCGTGGGCGTG
GGAATGCAGAGGAGGGACCGGTCTCCAGCAAACCCTGGGGGACCGAGAAG
CTGCAGAAGTATTTGTGTTACGTGCGGGACACATACACTTCGGTGCAGCT
CACGAAAGATGCAGAGGTGAGATGAGCAAAAGGAGACACGAATGGCATGA
GGGCAACGCCGTTTTGCTTTCCATGGTTGTATATATAACGGTTAGTTGCG
CTCGACGGAACCATGTGCTAAGGCTCATTTTGTATCAGTAGATTTGTGTG
TTTGGGCATAGTTCTTTTGGTATTCACAAAAAAGCGAATGTCGATTTTGT
GATGTCCTGAATGTTGAACGCCCTTCGGCGTATCCTGTGGCGCTCGCCAA
CAAATGGTTTCGATACGTGCTTGCGTTGCTTGCAAATCGCAGGTGGTTGT
GGCAAAGTACTACCAAAGCCAGCGAAGCGCCGACAACCGGTCTGCAGCGC
GAACCACCGTCCGGCTGCTCGAGTCTCTCATACGATTGGCGCAGACGCAC
GCGAAGCTCATGTGTAGGACACAAGTCACACTTCAGGTAAAAAATCGGAC
CTAGGAAAACTAGGAAAACTATGTTTTTTTAGTATTCAGCTTGCCCTCGT
AGAAATGTCGCTGAAGCTCGGGAAAAATCCTCTCTGTTAATGCCCCAAGA
ATTGGGCAGGGAACGACACAGGCGAAAAATCACGAATGCGGAAATCAATC
TGGCAGTGCCAATCCCGACCCCTGAACCAGGTTGTTTCAATACTTCGTTA
GCCACTTACAGGTTTGTATTCGTGCCCTTTCTTTCCAGGAGGGAGTGTAG
TTGTGCCTCCCGATTACGTATGTGTTTCGCATTTGGCAGACAGCAAAACC
CCCAGCAGGTGCATTTTACTTGCACAATTAGAGACACATCCCAGTGGCTC
GAAATCAGTTCGTGTAGTCAAGTATAAAGACAAACTTCAATTTATTCATC
AGTACCTGGAGACATTTCTCATGCTAATACCGACATAATGGAAATATTTA
GTGCGTATTTGAGTCCTTGCTACAAAATAATGATCAAGATTGGGGCAATT
GTCGGTATCATTCAATGTGTTTCATTTTTACGGCCGAATTATTTTTGTAT
AGAGCAAAACAAAACGGTAGTCCATCCGCAATCACACGGATTCATGCTGA
CAGCAACCCATGGGGTAGTCTGACTATTGAGCGTATGACAGTCATTTTGA
CGAGCGTGTGTGTCCAATTACTCCACACATGTTAATAACAGTATATGAAT
AGCGGGTGTTCGGAGAGATTGAGGACATTTTTTGTGCCCTTTAGCTGAGC
TTAACAATTTTTGTCACGTTTCACCATCGTTCCATTCGCACGGTTATCGA
GTAGTGCGGATCTCGTTACGTTTATCCGGCGCTTTCGCACCCGGAATGGT
GGGAACATGCCGCTTCTGTACGACGTCTTGGAATTGAGGGAGAGAACGGT
GTGTTCAGCACTTTACCCAACCTTTATAATCCTTACCTGAGATGGGCGAG
AACCGTAGGTTGACCCCACGCTTGACGCTGTTGTGGCTTAGCACTGCTAT
GCCGTTGCGCTGCATGTCATTGCAGGACGCAGTGGTGTCGGTGATCTATG
TGGAGACGTCGCTGCATTCCACGGCACAGCTGGGCATGGAATCTGTTTTA
CACAGCGACTTTCCGCCCAACCCGGACGAAGGCATGTACTTATTTGTAGG
AGTAGAGGGCAAGGTGCAGGGTCAGTGCTGAATCCATGGTATGTATGTGT
AGACCTGTCCTTGCTCGACGAGGTTTCGTGGTTCTTGGGGCACAAGGCAG
CTCAAATGGAGCAAAAGATTGTGCAGCCAATGGGCCTCATCGTCTGCAAC
CCTTGATTTTGGTGTCCGTTTTTACGTGTGTTTGATGAAGCGAGTGGGGG
TTTCCATGTGCCGAGGTTGAAACTAAGCAACGATGTACGTAGTCACACTC
CATCTTGGTGTCACTCAATGGTGGAGTGGATCTCAACCGCTGCCCCCTTT
CAGCTATTTCGGGAGCGAATACGCGCGACAATGCTACATCTCCCCATCAT
CCCCCCGCCCCCCTCCGTCCCCAACGCTATTTTCCGCCGCAACGCAACAG
AATTCGAGATCCAGCAGGGGCTGATCCTGGATCGCCTAGGCCTCAGGTGG
GCTTGTACAATACACTTGAATCAGGCTGAATGAGAAGAAGAGGCAATACG
CAGGATGAGCCTCGCTGTTGTTGTTTCGTTAATATCTAAATTGCATAGCG
TTCATTCTCCCTCACGCAATATCTCTGTCTCTGTCTCTGTCTCTTTGTCT
TTTTCTTATTTCTCTCCTGTAGTCATTTCCACCGCCCTCGTGGCCCGCCA
CAACCGCCGCCCCTCTCCGGAGAAACGTCCCGGGAACATTCTCAAACGTT
TCGCGAACAGTCCCTAAACGGTTCGTCAAACAATAGATGGGCGGAATTTG
GAGCTGCCGCTGCCGCGTCAAGGTTCGGCTTGAAGCGACCACGAGAACCA
GTGGATGACTGGGTGGGAGGTGACCCCCAGGAAGGGGGAAATGGGGTTGT
CGTCGGTGGAGGCGGCGGAAACGGTAACGGATGGGGAGATATGCTAGTGA
TGAGTCAAAGACCAGACAAGATTTCGACGCCATACCGATGACAAAACTCA
AAGAGGACGGAAGAACAAGAAGCAGGGGGGCGCTCTGAAGTGAGCACTCT
ACTCAATTTCCTCTGAGATCATGTGGGGGGGTCTATTGTCACTATCAACA
GGGTGTCCCCATGTGTCCTGTCGAGGGACGTGTGCCTGCATGATGCACAG
ATGTGTTTTGGCAACGCCGTTCACAGCTGGGGAGCGCCGTAAAGGTGAAG
GTAGCAAGGTCTGCTCCAGCTGCTACTATTTTGTCAACCGAACTTACCAA
CTAGGTTGCCAACGCAGCAACACCAGACTAATAGCGCACACGGCGCGCGA
TGTGCGCACAAACCGGTCGTCACAGACAGCGGCGGCTGCAGAGCGAAGTA
AATGAAGCAGACTCGGTCGCAAAAAAAGGATGGAGTAAGGACTTGTAGCA
TGCATGGTAGCCGTAGACGGACGCTGTTGTTCCTGAGGCGGACAAGGCGA
CACAAAAATAATATCTCGCACTTCCGACCAGCAGCGCACCGGGCTGGACC
CAATTTTACGCGGAGGTCGGACCTGTGAACGGGAGACGGCAGCGCAACTG
TACTACTGCTGCCATGGTCTCCTGACGTCCTTGCTGGCAACATACACGTG
GCGCAATTCTTCATCGTTCAAGCAGTCAAGCACACGGAACGTTTTTTCTC
AGGTCAACCATCGGGCAAACTGAGAAATAACGAAGTTGAGTTGAACCTTG
GCTCCACTTAAATTGGTTTATGAATCTCGTCTTCGAGAAGACTCTGTTTC
TCAACTTCACGACAAAACTGTACTACATTATGTAACATGTAGTCTTACCG
TATGTGCGTGCATTTATTCAAATGCACCATGTTATATTCCCCGGGAAACT
TTTCAAGATAAATTGTCAGTACGAGGAATTGCACCCTGA

Coding sequence (CDS) from alignment at H-paniculata_contig15882:21..5309+

>mRNA_H-paniculata_contig15882.3407.1 ID=mRNA_H-paniculata_contig15882.3407.1|Name=mRNA_H-paniculata_contig15882.3407.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=2100bp|location=Sequence derived from alignment at H-paniculata_contig15882:21..5309+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGTACATATTCCATCCACATCAATGTTGCACCGGACGAAACAAGGGTAC
TTACGACATGTACATATTCCATCCACATCAATGTTGCACCGGACGAAACA
AGGGTACTTACGACATGACGGTGAACACGGCTATCTACAGCCCTCTTCTC
TCGCGATTCGACTTCGTCCTGCTCTTGCTTGACACCAAGAACAAGATGAC
GGTGAACACGGCTATCTACAGCCCTCTTCTCTCGCGATTCGACTTCGTCC
TGCTCTTGCTTGACACCAAGAACAAGGAATGGGATAAGGTTGTGTTCACG
TTCGTGCTGAGAGCAGCTATCGGGCCGGCAACCCCCCCAGCGCCTGCGAG
AAAAACCCGCTCCACACGAGAAGCTAATGCTGACGATACTAGTCAAGGAA
TGGGATAAGGTTGTGTTCACGTTCGTGCTGAGAGCAGCTATCGGGCCGGC
AACCCCCCCAGCGCCTGCGAGAAAAACCCGCTCCACACGAGAAGCTAATG
CTGACGATACTAGTCAAGGGAACGCCTCTTCAACGAGATCTGTGAGCGGG
GGACGAAGCGGGAGTGGGCGTGGGCGTGGGAATGCAGAGGAGGGACCGGT
CTCCAGCAAACCCTGGGGGACCGAGAAGCTGCAGAAGTATTTGTGTTACG
TGCGGGACACATACACTTCGGTGCAGCTCACGAAAGATGCAGAGGGAACG
CCTCTTCAACGAGATCTGTGAGCGGGGGACGAAGCGGGAGTGGGCGTGGG
CGTGGGAATGCAGAGGAGGGACCGGTCTCCAGCAAACCCTGGGGGACCGA
GAAGCTGCAGAAGTATTTGTGTTACGTGCGGGACACATACACTTCGGTGC
AGCTCACGAAAGATGCAGAGGTGGTTGTGGCAAAGTACTACCAAAGCCAG
CGAAGCGCCGACAACCGGTCTGCAGCGCGAACCACCGTCCGGCTGCTCGA
GTCTCTCATACGATTGGCGCAGACGCACGCGAAGCTCATGTGTAGGACAC
AAGTCACACTTCAGGTGGTTGTGGCAAAGTACTACCAAAGCCAGCGAAGC
GCCGACAACCGGTCTGCAGCGCGAACCACCGTCCGGCTGCTCGAGTCTCT
CATACGATTGGCGCAGACGCACGCGAAGCTCATGTGTAGGACACAAGTCA
CACTTCAGGACGCAGTGGTGTCGGTGATCTATGTGGAGACGTCGCTGCAT
TCCACGGCACAGCTGGGCATGGAATCTGTTTTACACAGCGACTTTCCGCC
CAACCCGGACGAAGGACGCAGTGGTGTCGGTGATCTATGTGGAGACGTCG
CTGCATTCCACGGCACAGCTGGGCATGGAATCTGTTTTACACAGCGACTT
TCCGCCCAACCCGGACGAAGAATTCGAGATCCAGCAGGGGCTGATCCTGG
ATCGCCTAGGCCTCAGAATTCGAGATCCAGCAGGGGCTGATCCTGGATCG
CCTAGGCCTCAGTCATTTCCACCGCCCTCGTGGCCCGCCACAACCGCCGC
CCCTCTCCGGAGAAACGTCCCGGGAACATTCTCAAACGTTTCGCGAACAG
TCCCTAAACGGTTCGTCAAACAATAGATGGGCGGAATTTGGAGCTGCCGC
TGCCGCGTCAAGGTTCGGCTTGAAGCGACCACGAGAACCAGTGGATGACT
GGGTGGGAGGTGACCCCCAGGAAGGGGGAAATGGGGTTGTCGTCGGTGGA
GGCGGCGGAAACGGTAACGGATGGGGAGATATGCTAGTGATGAGTCAAAG
ACCAGACAAGATTTCGACGCCATACCGATGATCATTTCCACCGCCCTCGT
GGCCCGCCACAACCGCCGCCCCTCTCCGGAGAAACGTCCCGGGAACATTC
TCAAACGTTTCGCGAACAGTCCCTAAACGGTTCGTCAAACAATAGATGGG
CGGAATTTGGAGCTGCCGCTGCCGCGTCAAGGTTCGGCTTGAAGCGACCA
CGAGAACCAGTGGATGACTGGGTGGGAGGTGACCCCCAGGAAGGGGGAAA
TGGGGTTGTCGTCGGTGGAGGCGGCGGAAACGGTAACGGATGGGGAGATA
TGCTAGTGATGAGTCAAAGACCAGACAAGATTTCGACGCCATACCGATGA