mRNA_H-paniculata_contig1586.3398.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig1586.3398.1 vs. uniprot
Match: A0A6H5JE30_9PHAE (Uncharacterized protein n=3 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JE30_9PHAE) HSP 1 Score: 736 bits (1901), Expect = 6.450e-258 Identity = 375/562 (66.73%), Postives = 443/562 (78.83%), Query Frame = 3
Query: 420 PFSWRKLGSFEKMLTQTRDGIGPAEEGVRTLLTPHVWAAVIDGDLPRSSLKRGVEAVLECHPMLRACIRTPDGPKEPLINLIGEVRDDGDPLFFCEAEYESLGELAERVLAPEETEVEGETAFEREWQARLEGNLDNARLPVSVGPNWRLETIRLAGK-------SRTAIVCTMNHALEDQRSSNLMLDGILGAAGGVQLPEPSGSKSDSTDTVEFPPSMEMALIEGETFRANTMGYIWSQATAAISQPRVLPEGLPSAENRGQDGDDGAYGVATRKTACEFSFITEDEITAMLLACRERGQTLSQALSAASLMACSDVSQAEGSRGAHRYKFLMAVDLRRFGVGPHKGNDDWTRGTVACAGGAIDYVVKVSDGSGRKLIGEDGEVAARAARDEFWRLARRCKDATRDLVEKETAREAVAVFDWAMESMDIWASVNIESRNPKSLGRAYTCGLSNMGRYPFETQV------------------------GGLHLKAVHYGTSQSGCGSLFQLSCGTVEGKMLMTLQFAQPVISRTMAQAYLLGITKCLRAGCGIP--PTAES 2006
PF RKLGSFEKMLTQTRDG GPAE+GVRTL TPHVWAAVIDGDLPRSSLKRG+EAVL HPMLRACIRTPDGPKEPLI++ GE RDDGDPL+FCE+E ESLG LAERVLAPEE E+ G+ AF REW+ RLE NLDNARLPVS GPNWR+ETIRL+G+ SRTA+VCTMNHALEDQRSSN+ML GIL AA G + P+ S +D+ + PPSME A++EG+ FR NT+ Y+W QAT AI++P VLP+GLPS + R + GD+G +GV++RK+ACEFS + D+++AML ACRERG TLS ALSAA LMACSDV+ AEGSRG++RYKFL+AVDLRRFG G + DWT GTVACAGG+IDY V V GSG L+G DGE AAR AR+EFWRLA+RCK AT+D+VEKET REAVAVFDWAME++ IWASV+++SRN K+LGRAYTCG+SNMGRYPF+TQV G L LKAVHYGTSQS GSLFQLSCGT++G++ MTLQFA+P+++R QAYL GI +RA CGI P A++
Sbjct: 30 PFVSRKLGSFEKMLTQTRDGAGPAEDGVRTLTTPHVWAAVIDGDLPRSSLKRGIEAVLARHPMLRACIRTPDGPKEPLIDIRGEERDDGDPLYFCESECESLGALAERVLAPEEDEISGDEAFAREWRGRLERNLDNARLPVSTGPNWRVETIRLSGRGRPGPRRSRTALVCTMNHALEDQRSSNVMLQGILEAAAG-KAGGPARSANDAGG-FDLPPSMEAAIVEGKRFRINTLRYMWRQATVAIAKPMVLPDGLPSVDERSEGGDEGPFGVSSRKSACEFSSVPADDVSAMLQACRERGLTLSGALSAACLMACSDVAHAEGSRGSNRYKFLLAVDLRRFGTGDYSDMGDWTGGTVACAGGSIDYAVTVPAGSGSMLVGRDGEEAARVAREEFWRLAKRCKTATQDMVEKETLREAVAVFDWAMENIHIWASVDMQSRNAKTLGRAYTCGVSNMGRYPFDTQVRSPFGTGVRSVSSPFLLVGATMCVGNLSLKAVHYGTSQSARGSLFQLSCGTIDGELFMTLQFAEPLVTREAGQAYLRGIIDNVRAACGISSRPAADT 589
BLAST of mRNA_H-paniculata_contig1586.3398.1 vs. uniprot
Match: A0A6H5JIH8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JIH8_9PHAE) HSP 1 Score: 425 bits (1093), Expect = 7.020e-139 Identity = 217/329 (65.96%), Postives = 259/329 (78.72%), Query Frame = 3
Query: 681 DGDPLFFCEAEYESLGELAERVLAPEETEVEGETAFEREWQARLEGNLDNARLPVSVGPNWRLETIRLAGK-------SRTAIVCTMNHALEDQRSSNLMLDGILGAAGGVQLPEPSGSKSDSTDTVEFPPSMEMALIEGETFRANTMGYIWSQATAAISQPRVLPEGLPSAENRGQDGDDGAYGVATRKTACEFSFITEDEITAMLLACRERGQTLSQALSAASLMACSDVSQAEGSRGAHRYKFLMAVDLRRFGVGPHKGNDDWTRGTVACAGGAIDYVVKVSDGSGRKLIGEDGEVAARAARDEFWRLARRCKDATRDLVEKETAR 1646
DGDPL+FCE+E ESLG LAERVLAPEE E+ G+ AF REW+ RLE NLDNARLPVS GPNWR+ETIRL+G+ SRTA+VCTMNHALEDQRSSN+ML GIL AA G + P+ S +D T + PPSME A++EG+ FR NT+ Y+W QAT AI++P VLP+GLPS + R + GD+G +GV++RK+ACEFS + D+++AML ACRERG TLS ALSAA LMACSDV+ AEGSRG + YKFL+AVDLRRFG G + DWT GTVACAGGAIDY V V GSG +L G DGE AAR AR+EFWRLA+RCK AT+D+VEKET R
Sbjct: 95 DGDPLYFCESECESLGALAERVLAPEEDEISGDEAFAREWRGRLERNLDNARLPVSTGPNWRVETIRLSGRGRPGPRRSRTALVCTMNHALEDQRSSNVMLQGILEAAAG-KAGGPARSAND-TGGFDLPPSMEAAIVEGKRFRINTLRYMWDQATVAIAKPMVLPDGLPSVDERSEGGDEGPFGVSSRKSACEFSSVPADDVSAMLQACRERGLTLSGALSAACLMACSDVAHAEGSRGLNLYKFLLAVDLRRFGTGDYSDMGDWTGGTVACAGGAIDYAVTVPAGSGSRLAGRDGEEAARVAREEFWRLAKRCKTATQDMVEKETLR 421
BLAST of mRNA_H-paniculata_contig1586.3398.1 vs. uniprot
Match: A0A835ZIW7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZIW7_9STRA) HSP 1 Score: 400 bits (1028), Expect = 1.300e-126 Identity = 242/555 (43.60%), Postives = 317/555 (57.12%), Query Frame = 3
Query: 414 PPPFSWRKLGSFEKMLTQTRDGIGPAEEGVRTLLTPHVWAAVIDGDLPRSSLKRGVEAVLECHPMLRACIRTPDGPKEPLINLIGEVRDDGDPLFFCEAEYESLGELAERVLAPEE------TEVEGETA--FEREWQARLEGNLDNARLPVSVGPNWRLETIRLAGKSRTAIVCTMNHALEDQRSSNLMLDGILGAAGGVQLPEP---------SGSKSDSTDTVEFPPSMEMALI-EGETFRANTMGYIWSQATAAISQPRVLPEGLPSAENRGQDGDDGAYGVATRKTACEFSFITEDEITAMLLACRERGQTLSQALSAASLMACSDVSQAEGSRGAHRYKFLMAVDLRRFGVGP--HKGND------------DWTRGTVACAGGAIDYVVKVSDGSGRKLIGEDGEVAARAARDEFWRLARRCKDATRDLVEKETAREAVAVFDWAMESMDIWASVNIESRNPKSLGRAYTCGLSNMGRYPFETQVGGLHLKAVHYGTSQSGCGSLFQLSCGTVEGKMLMTLQFAQPVISRTMAQAYLLGITKCLRAGC 1982
PPPF R LGSFEKML + R G L TPHVW AV+ GD+ ++L G+ A+L HPMLRA I+ P+E ++ I D DPL F E+E +SL ELA RV+ PE+ T V E F+ W AR+E L++A+ GPNW +E +R A ++ TA+V TMNHA+EDQ+S+N +L +L AA P + S + + E PPS+E A + E F T Y+ QA + + PR++ + LP E R A+ R+T CE + DE+ A L ACR++G TL+ ALSAA+L+ACSDV+ A+GS H YKFL+AVDLR FG G H+G DWT G VACAGGA+D+V + SGR L+ AA A RD FWRLARR + TAREA AVFDW M +++I E+R P +LGRAYTCG+SNMGRY G + A+HY TS S GSL+QLSCGTV G++ MT QFA+P++ R M A+ + LRA C
Sbjct: 56 PPPFKSRVLGSFEKMLAKER-------MGSNILSTPHVWVAVVQGDVSPTALHAGIVALLARHPMLRASIQGAGLPEEVVMETIRTSPVDADPLRFVESECDSLEELAYRVITPEQGAGTRGTGVRHEDGAPFQAAWHARMEHQLEHAQFDRRAGPNWAVEAVRCASRAHTALVFTMNHAIEDQKSANTLLHELLIAAAXXXXXPPRLAPAAALAALSAACAPPFTELPPSIEDATVAEPGKFGLGTARYLLKQAASGVFGPRLVHDHLPPPERRATP----AFAPEARRTICEVRALEADELQAALAACRQKGLTLTAALSAAALLACSDVAHADGSDAWHNYKFLLAVDLRPFGAGAPGHQGKPNANGGGAEARALDWTEGAVACAGGAMDWVAGLPANSGRALVSG----AAGAERD-FWRLARRARGEMAAFAASGTAREAAAVFDWGMRAIEIGDVCEREARRPATLGRAYTCGVSNMGRYAHAATTGA-RVAALHYATSHSPWGSLYQLSCGTVGGRLCMTFQFAEPIVGRAMGAAFADALVAVLRAAC 593
BLAST of mRNA_H-paniculata_contig1586.3398.1 vs. uniprot
Match: A0A7S2V5Q7_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V5Q7_9STRA) HSP 1 Score: 252 bits (644), Expect = 1.230e-70 Identity = 190/557 (34.11%), Postives = 276/557 (49.55%), Query Frame = 3
Query: 390 KTGQSQVTPPPFSWRKLGSFEKMLTQTRDGIGPAEEGVRTLLTPHVWAAVIDGDLPRSSLKRGVEAVLECHPMLRACIRTPDGPKEPLINLIGEVR-DDGDPLFFCEAEYESLGELAERVLAPEETEVEGETAFEREWQARLEGNLDNARLPVSVGPNWRLETIRLAGKSRTAIVCTMNHALEDQRSSNLMLDGILGAAGGVQLPEPSGSKSDSTDTVE----------FPPSME--------------MALIE------GETFRANTMGYIWSQATAAIS-----QPRVLPEGLPSAENRGQDGDDGAYGVATRKTACEFSFITEDEITAMLLACRERGQTLSQALSAASLMACSDVSQ-------AEGSRGAHRYKFLMAVDLRRFGVGPHKGNDDWTRGTVACAGGAIDYVVKVSDGSGRKLI-GEDGEVAARAARDEFWRLARRCKDATRDLVEKETAREAVAVFDWAMESMDIWASVNIESRNPKSLGRAYTCGLSNMGRYPFETQVGGLHLKAVHYGTSQSGCGSLFQLSCGTVEGKMLMTLQFAQPVISR 1928
+T + V F R LG+FEK L+ TR +E V + L+ V + D + SL +EAV+ H +LR+C+ G +P + VR D DP + A + G LA +VL + + E AF+ WQ LDNA GP WRL + AG R A++ NHA+ DQ S+N++LD +L + S SKS + E PPS+E ALI+ G T + + SQ A I QP + E LP+ Y R T E + + ++ A+ CR G T+S AL+AASLMA SDV+ GS + YKFL++VDLRRFG DWT+G VACAGGA+D+VV V++ + + + G+ ++ FW LAR C+ + + RE VA+FDW M+ +DI +N E+ + K+LGR +TCG+SNMG Y G ++L+ +HY TS + G+L+QLSCGTV ++ +T QF +P+++R
Sbjct: 50 ETSTTSVESAEFQGRPLGNFEKYLSGTRR---ESENVVISHLSLAVVSDTTDSLVSEISLLETLEAVMNRHCLLRSCV---SGEGKPELEPAPMVRIGDLDPPTWVPAPLGAKG-LAPKVLQTIQVDGSDEEAFQAAWQKEFVWQLDNASYNKKTGPLWRLTWLPQAGAQRHALLFAFNHAISDQISANMILDEVLTSL--------SSSKSKTAALAEAFGPAPNNGQLPPSVEETVGAGGLQLGTARYALIQTINGAKGVTLLPDRIKKRLSQKEAEIKELKKEQPELAEEELPAIVPE-------EYLSKNRNTFIELATLKASKLAALRDLCRREGVTVSAALAAASLMATSDVAHDTTXXXXTRGSPKSQLYKFLLSVDLRRFG---DSSGADWTKGAVACAGGAVDFVVPVTEKAASEFLHGDSTQMKG------FWDLARTCRKEALEFIGTNFVRETVAMFDWGMKYVDIGEIMNDEADSKKALGRLFTCGVSNMGVYKGH-DYGSINLEKIHYATSHTITGTLYQLSCGTVNSELHLTFQFTEPLVTR 574
BLAST of mRNA_H-paniculata_contig1586.3398.1 vs. uniprot
Match: A0A7S1UC64_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UC64_9STRA) HSP 1 Score: 176 bits (447), Expect = 1.690e-43 Identity = 166/553 (30.02%), Postives = 249/553 (45.03%), Query Frame = 3
Query: 426 SWRKLGSFEKMLTQTRDGIGPAEEGVRTLLTPHVWAAVIDGDLPRSSLKRGVEAVLEC---HPMLRACIRTPDGPKE---PLINLIGEVRDDGDPLFFCEAEYE-SLGELAERVLAPEETEVEG--ETAFEREWQARLEGNLDNARLPVSVGPNWRLE-----TIRLAGKSRTAIVCTMNHALEDQRSSNLMLDGILGAAGGVQLPEPSGSKSDSTDTVEFPPSMEMALI----------EG--ETFRANTMGYIWSQATAAISQPRVLPEGLPSA--ENRGQDGDDGAYGVATRKTACEFSFITEDEITAMLLACRERGQTLSQALSAASLMACSDVSQAEGSRGA-----HRYKFLMAVDLRRFGVGPHKGNDDWTRGTVACAGGAIDYVVKVSDGSGRKLIGEDGEVAARAARDEFWRLARRCKDATRDLV-EKETAREAVAVFDWAMESMDIWASVNIE-SRNPKSLGRAYTCGLSNMGRYPFETQV-GGLHLKAVHYGTSQSGCGSLFQLSCGTVEGKMLMTLQFAQPVISRTMAQAYLLGITKCLRA 1976
SWR+LGSFE +L + G + L PH A++DG P S + V+A+ C HP+LRA + T GP + P N+ + D DPL F + SL ++A++VL G E AFE W++ L+ GP W++ T R A+V NHA+ DQ +N ++D + A V + G+ PPS+E A++ EG + F T+ Y + Q S +LP + + E R Q G YG + R T + + + +E A+L G T++ A AA +A D Q A ++ + LM++D+RRFG G + +DWT+GT+AC GGA D+V L DGE W LAR + D + + + E+V +FD +D+ V E S N SLGR Y+ G+SN G + V ++ VHY TS + G LFQLS TV+ +T Q P++ A ++ + LR+
Sbjct: 64 SWRRLGSFESVLARATVG--------QKLDLPHATVAILDG--PAVSRAQMVDALALCAAKHPLLRARV-TGTGPLDADKPNPNI--RLNSDFDPLTFSPMDPALSLRDIADKVLRETAELPAGGDEEAFEGAWRSAFSDALNAWETDTKEGPLWQVAWAQQPTGGAGAPRRHAVVIDFNHAVSDQTCANTLIDDLAAALDAVVVR--GGAPKAVALERRAPPSVEEAVLGPSHAPSPDFEGVVKNFSLATLRYGFFQIMNGASGAALLPPAVQALKPEERDQQG----YGFSKRSTRLQHAVLEPEEGKALLARSTAEGTTVTGAFVAAVTLAALDTLQKFSGDAAAGDVPNKLRILMSLDMRRFGRGAPQ--EDWTKGTMACGGGATDFV----------LAARDGESP--------WELARTARKRIVDFITDPDFPAESVRLFDIGSRFLDMPKFVKEEGSTNLASLGRGYSAGVSNTGVFRARASVDSAFQIRRVHYATSHTHTGCLFQLSAVTVDNNFCLTFQTPTPLLREEEAAYFVDNTVQRLRS 577
BLAST of mRNA_H-paniculata_contig1586.3398.1 vs. uniprot
Match: W7TVP6_9STRA (Uncharacterized protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TVP6_9STRA) HSP 1 Score: 172 bits (437), Expect = 2.130e-41 Identity = 141/488 (28.89%), Postives = 219/488 (44.88%), Query Frame = 3
Query: 822 LDNARLPVSVGPNWRLETIRLAG---KSRTAIVCTMNHALEDQRSSNLMLDGILGAAGGV------QLPEPSGSKSDSTDTVEFPPSMEMALIEGE--TFRANTMGYIWSQATAAISQ----PRVLPEGL---PSAENRGQDGDDGAY-GVATRKTACEFSFITEDEITAMLLACRERGQTLSQALSAASLMACSDVS---------------QAEGSRGA-HRYKFLMAVDLRRFG-----VGPHKGNDD---WTRGTVACAGGAIDYVVKVSDGSGRKLI-----------GEDG-EVAARAARDEFWRLARRCKDATRDLVEKETAREAVAVFDWAMESMDIWASVNIESRNPKSLGRAYTCGLSNMGRYP--------------------------------------FETQV---------GGLHLKAVHYGTSQSGCGSLFQLSCGTVEGKMLMTLQFAQPVISRTMAQAY---LLGITKCL 1970
LD + S GP WRL+ +R G + R A++ NHA+ DQ S N ++ +L + + P P G + FPPS+E A++ T T+ Y +A I PR P P+A+ G + ATR+T CEF + D ++ + AC+ RG T++ AL AA L A SD + Q +G GA H Y+ L+++++R FG G G ++ W VA A GA+D++V++ + G L DG E + +FW L +RC+ D +E E+V +FDW M+++++ V E+ NP++ GRAYTCG+SNMG + E G + L+ ++Y TS S GSL+QLSCGTV+G + +T F P++ R+MA+ + +L I +C+
Sbjct: 253 LDETDMDTSRGPLWRLKVLRPMGARREGRIALLFLFNHAISDQTSCNTLIHELLDTVEHIHSSCLDRQPTP-GRPAPFVIPQAFPPSIEEAVLGPTRGTLSLTTLLYAAREALFGILPTTLFPRFPPPSYTPRPTADPEGPXXXXPPFLPAATRRTICEFRTLDSDSLSMLRAACKSRGVTVTAALCAAMLYATSDFAHGQDGGGGRPERGHKQQKGREGAYHNYRLLLSLNMRAFGRSRKDEGREGGGEEEKMWAEHAVASAAGAMDFMVRLPEQRGSTLSLRPKRTGGSEEANDGTEDGVWEGKRDFWALTKRCRRELVDFIEAGFVAESVQLFDWGMQTIELNDVVEKEAENPQTFGRAYTCGVSNMGIFDGTGRSRVLAEGPNSDGSASVHARCQNGEDRESGERMRVIEASTPSAVPTAAYGPMRLRGIYYATSHSLTGSLYQLSCGTVDGALCLTFHFPWPLVPRSMARCFANRVLQILQCV 739
BLAST of mRNA_H-paniculata_contig1586.3398.1 vs. uniprot
Match: A0A7S0LLM9_9EUKA (Hypothetical protein n=1 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0LLM9_9EUKA) HSP 1 Score: 151 bits (382), Expect = 4.270e-36 Identity = 121/426 (28.40%), Postives = 202/426 (47.42%), Query Frame = 3
Query: 810 LEGNLDNARLPVSVGPNWRLETIRLAGKSRTAIVCTMNHALEDQRSSNLMLDGILGAAGGVQ----LPEPSGSKSDSTDTVEFPPSMEMALIEGETFRAN----------------TMGYIWSQATAAISQPRVLPEGLPSAENRGQDGDDGAYGVATRKTACEFSFITEDEITAMLLACRERGQTLSQALSAASLMACSDVSQA-----EGSRGAHRYKFLMAVDLRRFGVGPH----KGNDDWTRGTVACAGGAIDYVVKVSDGSGRKLIGEDGEVA-ARAARDEFWRLARRCKDATRDLVEKETAREAVAVFDWAMESMDIWASVNIESRNPKSLGRAYTCGLSNMGRYPFETQVGGLHLKAVHYGTSQSGCGSLFQLSCGTVEGKMLMTLQFAQPVISRTMAQAY---LLGITKCLRAGCGI 1988
L+G+L + P+ WR+ + +A++ NHA+ DQ S +L ++GA + LP P ++ PPS+E ALI + A T+ Y Q +A + VLP +P G++ + R+TA F+ ++ ++ CR G T+S A++AA+L+A SD A +G+ RYK L A+++R +G G+ DW+ G+V G++D +V ++ GSGR L+ + A A W A+ C + TR ++ RE++ +F E M++ V + +++ +LGRAY+CG SN+G Y ++ L L+ + +G SQS LSC TV+G + +T+Q+ P+ S A A+ L I AG G+
Sbjct: 7 LDGSLFSHEAPM-----WRMRLF--VCEEESALLYAANHAVSDQLSLQRVLGELIGAISAERSSELLPPPV--------SLPVPPSVEEALIGPYSVAAEPIDARLRSLLRRVRLATLSYAGFQLSAGGAP--VLPNWVPPPSKIGEE-----MHLRERRTASIFAMVSSKSTASLRQRCRANGVTISGAVNAAALLAASDALGAVEKDEDGALKRLRYKLLQAINMRPYGGSDGGISGDGSRDWSAGSVLAGTGSLDLLVDLTPGSGRDLLDRVAQAPQASNALSTLWSTAKECNEQTRRWIDNGWPRESLVLFGAGWEFMNMNRVVELSAQDCSTLGRAYSCGTSNVGVYAHQSTGADLSLRRIFFGISQSVSAPAISLSCVTVDGGLCLTVQYCTPIWSNEQACAFTETLKNILMLAAAGDGL 410
BLAST of mRNA_H-paniculata_contig1586.3398.1 vs. uniprot
Match: A0A7R9YF98_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YF98_9STRA) HSP 1 Score: 150 bits (380), Expect = 1.950e-35 Identity = 144/478 (30.13%), Postives = 225/478 (47.07%), Query Frame = 3
Query: 600 HPMLRACIRTPDGP--KEPLINLIGEVRDDGDPLFFCEAEYE-SLGELAERVLAPEETEVEGETAFEREWQARLEGNLDNARLPVSVGPNWRLETI---RLAGKSRTAIVCTMNHALEDQRSSNLMLDGILGAAGGVQLPEPSGSKSDSTDTVE-FPPSMEMALIEGETFRAN-------------TMGY----IW-SQATAAISQPRVLPEGLPSAENRGQDGDDGAYGVATRKTACEFSFITEDEITAMLLACRERGQTLSQALSAASLMACSDVSQAEGSRGAHRYKFLMAVDLRRFGVGPHKGNDDWTRGTVACAGGAIDYVVKVSDGSGRKLIGEDGEVAARAARDEFWRLARRCKDATRDLVEKE-TAREAVAVFDWAMESMDIWASVNIESR-NPKSLGRAYTCGLSNMGRYPF--ETQVGGLHLKAVHYGTSQSGCGSLFQLSCGTVEGKMLMTLQFAQPVISRTMAQAY 1946
HP LRA I + GP + + N I + D +PL F + E SL ++A VL G+ FE W+A + L+ + V+ GP W++ I + G + A+V NHA+ DQ S++ ++ + L + + + VE PPS+E A++ G + A+ T+ Y +W S A + PRV L SA R + G YG R T EF + + ++ CR G T++ AL AA A + + + + + LM++D+RRFG +G DWT+ T+ACAGGA D+V++ + E +A W LAR + D +E +E+V +FD +D+ V E R N +LGRAY+ G+SN G + ++ V+YGTS + G LFQLS TVEG + +T Q P++S A+++
Sbjct: 12 HPFLRARI-SGTGPLSRNKIDNNI-RLGADKNPLSFSTMDEELSLRDIAHSVLRSSSECKAGD--FEDAWRASFDSALNEWEMEVATGPLWQVSWISCPKCDGSYQHAMVFLFNHAISDQTSAHTLIRDLS-----TSLKIAHEGRVRAVEVVEGAPPSVEEAVL-GVSHEASPNVLRVLPGCGFSTLQYSLLQVWHSLQGAPLLSPRVS---LLSASARRRKG----YGFRNRNTRVEFEVLDAGLVKELVARCRREGTTVTGALVAAVWRAAARSIETPSEK-VDKLRVLMSLDMRRFG----QGEGDWTQATMACAGGATDFVLRANP-----------ETSA-------WDLAREARARITDFIESPWLPQESVRLFDVGSRMLDMVQIVKSEGRDNLNTLGRAYSVGVSNAGLFSKGPSAPADRWAVRNVYYGTSHTHTGCLFQLSAVTVEGSLCLTFQTPAPIVSEEEAKSF 449
BLAST of mRNA_H-paniculata_contig1586.3398.1 vs. uniprot
Match: A0A7S2B0Z3_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2B0Z3_9STRA) HSP 1 Score: 126 bits (317), Expect = 1.810e-27 Identity = 83/278 (29.86%), Postives = 139/278 (50.00%), Query Frame = 3
Query: 1209 YGVATRKTACEFSFITEDEITAMLLACRERGQTLSQALSAASLMAC-------SDVSQAEGSRGAHRYKFLMAVDLRRFGVGPHKGNDDWT-RGTVACAGGAIDYVVKVSDGSGRKLIGEDGEVAARAARDEFWRLARRCKDATRDLVEKETAREAVAVFDWAMESMDIWASVNIESRNPKSLGRAYTCGLSNMGRYPFET--------------QVGGLHLKAVHYGTSQSGCGSLFQLSCGTVEGKMLMTLQFAQPVISRTMAQAYLLGITKCLRA 1976
+ A R+++ F+ + + + A+ A + +G T+ AL+AA+ +C + +++ + +K L ++D+RRF + DWT T++C G++D +V + + + L + E +AR+EFW A CKD + AV VFD A +SM++ V + + +P SLGRAY+CG+SN G YP+ + +V L +V Y TS GSLFQ+SC T+EG + + L +P++ A YL L A
Sbjct: 154 FKAAQRRSSMRFATVDKKTLGALRKAAKIKGTTVGAALAAAAAFSCMRTFPGDDNTGESDKETSSMTFKVLQSLDMRRF------ASSDWTDTETLSCHAGSMDLMVTPTFATAKALSSRNSE---ESAREEFWEAAASCKDQLGQFIGSGFGPAAVRVFDLASQSMEMSRLVELNADSPLSLGRAYSCGVSNAGVYPWPSSHSSSYIDPASDTKRVRSAELTSVLYATSHVHAGSLFQMSCVTLEGVLHICLNTVRPLVPDAAADIYLASFVNTLEA 422
BLAST of mRNA_H-paniculata_contig1586.3398.1 vs. uniprot
Match: B8C3R0_THAPS (Uncharacterized protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C3R0_THAPS) HSP 1 Score: 117 bits (292), Expect = 2.220e-23 Identity = 145/622 (23.31%), Postives = 253/622 (40.68%), Query Frame = 3
Query: 411 TPPPFSWRK-LGSFEKMLTQTRDGIGPAEEGVRTLLTPHVWAAVIDGDLPRSSLKRGVEAVLECHPMLRACIRTPDGPKEPLINLIGEVRDDG-------DPLFFC-----------EAEYESLGELAERVLAPEE-------TEVEGETAFE--REWQARLEGNLDNARLPVSVGPN-----------WRLETIRLAGK------SRTAIVCTMNHALEDQRSSNLMLDGILGAAGGVQLPEPSGSKSDST--DTVEFPPSMEMA-----------------LIEGETFRANTMGYIWSQATAAISQPRVL------------PEGLPSAENRGQDGD----------DGAYGVATRKTACEFSFITEDEITAMLLACRERGQTLSQALSAASLMACSDVSQAEGSRGAHR-YKFLMAVDLRRFGVGPHKGNDDWTRGTVACAGGAID-YVVKVSDGSGRKL-------IGEDGEVAARAARDEFWRLARRCKDATRDLVEKETAREAVAVFDWAMESMDIWASVNIESRNPKSLGRAYTCGLSNMGRYPFETQV---------------GGLHLKAVHYGTSQSGCGSLFQLSCGTVEGKMLMTLQFAQPVISRTMAQAY 1946
T P F R+ LG+ E + G + R + H+ A ++ +L++ +++ + HP+LR+ + PK+ L + VR +G DPL F E E S+ + +++V P+ V G + E R WQ R + +LD++ + VSV + W+LE RL+ ++ A+V T+NHA+ DQ S +L++D I+ ++ + KS +T D +E P ++ ++ T R + + + ++ + R P LP G G + TR++ + I D A++ ++ +S L+AA CSD A+ + R YK L ++D RRF GN T++C G +D Y+ + D GR + G V A FW LA++ D T ++ A E+V +F M DI V +R+ + GRA++ G++N+G Y + V G ++ +++ TS + G F + C TV G M T+ P++S ++A+
Sbjct: 70 TKPTFQERRPLGAMELFMLPRPVGPEQDQNDQRPPMN-HIAAFILSSTPSTWALQQALDSAVRTHPLLRSRVVGNGQPKKWLDPIRRMVRWNGGWDEKEEDPLEFISNAISESNVVMETEPNSIDDSSDKVSCPKYWGGALHIVNVNGTSREELDRSWQHRFQEDLDSSTV-VSVAIDGSHALANTRDLWKLEMHRLSSNVVDDKDTQCALVLTLNHAISDQGSVDLVMDEIISDIEALEAMDEKSKKSYTTKRDPLEIPAVIQPLPTSLCDSLLGDSPQNEDCVDKSTDRQSVASILRAPFAPSLKKLREYACHRIQASILHRPALLPRQNEGGIIESLSILLFGRPLSGFEDITTRRSNVHYRTIPSDVTAALVKQSKKHRVPISMTLAAAVATTCSDYFNADENHREQRVYKVLQSLDTRRFAGASDVGN------TLSCQAGGMDLYLGPMQDCLGRDIREYFKCSTGIKNPVEA------FWTLAKQSFDQTSSFLKSGQAIESVRLFALGMSICDIGRLVETYTRSRATQGRAWSAGITNVGEYERQRAVVREGMQEQGQLKATHGEYTVEEIYFATSHARVGCTFPVGCITVAGSMCCTINPPWPLVSDEKSKAF 677 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig1586.3398.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 12
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig1586.3398.1 >prot_H-paniculata_contig1586.3398.1 ID=prot_H-paniculata_contig1586.3398.1|Name=mRNA_H-paniculata_contig1586.3398.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=638bp MPRRPRPWNAGDFILRFVVAASCTYKHQIVLSFVSTPSNIISRPSSSLSTback to top mRNA from alignment at H-paniculata_contig1586:6913..14473+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig1586.3398.1 ID=mRNA_H-paniculata_contig1586.3398.1|Name=mRNA_H-paniculata_contig1586.3398.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=7561bp|location=Sequence derived from alignment at H-paniculata_contig1586:6913..14473+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig1586:6913..14473+ >mRNA_H-paniculata_contig1586.3398.1 ID=mRNA_H-paniculata_contig1586.3398.1|Name=mRNA_H-paniculata_contig1586.3398.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=3828bp|location=Sequence derived from alignment at H-paniculata_contig1586:6913..14473+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |