prot_H-paniculata_contig1586.3397.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig1586.3397.1
Unique Nameprot_H-paniculata_contig1586.3397.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length396
Homology
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BLAST of mRNA_H-paniculata_contig1586.3397.1 vs. uniprot
Match: D7G761_ECTSI (Imm downregulated 15 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G761_ECTSI)

HSP 1 Score: 611 bits (1575), Expect = 5.570e-218
Identity = 317/387 (81.91%), Postives = 344/387 (88.89%), Query Frame = 0 
Query:    5 GLISAAALLVLGQHVDVGAFSVNQFAGAALRSRAS--ATTATPSMVAVSPVEGVKSNEKPKTREQMRKEARLAQERIRKYVTPPEQYADTPLSTASSEHLIGEEMVLDDASASEIADRCILEAERLFASDEGWTKVLEEDGIFVESKDVHGPYLKSGVRVVRGLGAIDADADKFYNFQVSREGFQSIDEYLENHRNVDRHEWVTQPHLKNMEDYELMTNRVEWAYPTQTREFVALDIVDKKRKILISKSSLHPDRPGGSRYQMETELDETEFVRAVQYYASKVEPLPDGKCLLRMVTWGEMCDSYTAFWVNKFNAHVFITPKFNRFRRVMA-GETVFELSNIVNEAWKLPKLLMIKPDHAVAKGSNFVDNLRNQGIEAAAAKKAAKA 388
            G ISAAALLVL QH+ V AFSVN FAGA++R + +  A++A PSMVA +P  G     KP T+E  RK  RL QERIRKYV PPE YAD PLST +SEHLIGEEMV DDA+AS +AD+CILEAERLFASDEGWTKVLE+DGIFVE+KDV GPYLKSGVRVVRGLGAI+AD D FYNFQVSREGFQSIDEYLENHRNV+RHEWVTQP  +NM+DYELMTNRVEWAYPTQTREFVALDI+D+ RKILISKS+LHPDRPGGSRYQ E  LDET++VRAVQYYASKVEPLPDGKCLLRMVTWGEMCDSYTAFW+NKFNAHVFITPK+ RFRRVM  GE VFELSNIVNEAWKLPKLLMIKPDH+VAKGSNFVDNLRNQGIEAAAAKKAAKA
Sbjct:    4 GRISAAALLVLAQHLHVDAFSVNGFAGASVRPQQTRTASSAAPSMVAAAPPSG-----KPMTKEMQRKMERLEQERIRKYVNPPEAYADQPLSTPTSEHLIGEEMVKDDATASALADKCILEAERLFASDEGWTKVLEDDGIFVETKDVAGPYLKSGVRVVRGLGAINADCDDFYNFQVSREGFQSIDEYLENHRNVERHEWVTQPQYENMKDYELMTNRVEWAYPTQTREFVALDIIDRPRKILISKSALHPDRPGGSRYQTEVPLDETDYVRAVQYYASKVEPLPDGKCLLRMVTWGEMCDSYTAFWINKFNAHVFITPKYKRFRRVMEDGEEVFELSNIVNEAWKLPKLLMIKPDHSVAKGSNFVDNLRNQGIEAAAAKKAAKA 385
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BLAST of mRNA_H-paniculata_contig1586.3397.1 vs. uniprot
Match: A0A0G4HAE1_9ALVE (Uncharacterized protein n=1 Tax=Chromera velia CCMP2878 TaxID=1169474 RepID=A0A0G4HAE1_9ALVE)

HSP 1 Score: 326 bits (836), Expect = 3.610e-105
Identity = 166/282 (58.87%), Postives = 212/282 (75.18%), Query Frame = 0 
Query:   94 LSTASSEHLIGEEMVLDDASASEIADRCILEAERLFASDEGWTKVLEEDGIFVESKDVHGPYLKSGVRVVRGLGAIDADADKFYNFQVSREGFQSIDEYLENHRNVDRHEWVTQPHLKNMEDYELMTNRVEWAYPTQTREFVALDIVDKKRKILISKSSLHPDRPGGSRYQMETELDE--TEFVRAVQYYASKVEPLPDGKCLLRMVTWGEMCDSYTAFWVNKFNAHVFITPKFNRFRRVMAGETVFELSNIVNEAWKLPKLLM----IKPDHAVAK-GSNF 368
            +S   SE LIGEE+V DD SAS ++DRC+ E +RL  S++GW    E +G  VE+K  HG Y  SGV +VRG+G IDA AD F+ +QVSREGFQ IDEYL NHR VD+++W+T+P L++ +DYELM NRVEW YP ++REFVALD V +  ++LISKS+LHP+RPGGSRYQ   E+D   + FVRAVQYY SKVEP+   KCLL MVTWGEMCD+Y+A+WVN+FN ++FITPKF RFR  M+G+TV+E SNIVN AW + KL      +KPD  + K G++F
Sbjct:  143 VSLPESEDLIGEELVTDDMSASLLSDRCMSELDRLIKSEDGWQSE-ELEGCVVETKKTHGAYGLSGVDIVRGVGEIDASADDFFEYQVSREGFQCIDEYLVNHRKVDQYKWLTRPELESGKDYELMMNRVEWRYPFKSREFVALDTVHRPERVLISKSALHPERPGGSRYQDALEVDPPGSPFVRAVQYYGSKVEPVGPNKCLLYMVTWGEMCDNYSAWWVNQFNKYLFITPKFRRFREAMSGKTVWEESNIVNNAWDILKLKHNMGGLKPDRTILKNGADF 423
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig1586.3397.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G761_ECTSI5.570e-21881.91Imm downregulated 15 n=2 Tax=Ectocarpus TaxID=2879... [more]
A0A0G4HAE1_9ALVE3.610e-10558.87Uncharacterized protein n=1 Tax=Chromera velia CCM... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR023393START-like domain superfamilyGENE3D3.30.530.20coord: 94..327
e-value: 2.8E-7
score: 32.4
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..23
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 4..15
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 16..23
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..3
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 24..395
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..16
score: 0.668
NoneNo IPR availableSUPERFAMILY55961Bet v1-likecoord: 112..319

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig1586contigH-paniculata_contig1586:1822..6627 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig1586.3397.1mRNA_H-paniculata_contig1586.3397.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig1586 993..6803 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig1586.3397.1 ID=prot_H-paniculata_contig1586.3397.1|Name=mRNA_H-paniculata_contig1586.3397.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=396bp
MARAGLISAAALLVLGQHVDVGAFSVNQFAGAALRSRASATTATPSMVAV
SPVEGVKSNEKPKTREQMRKEARLAQERIRKYVTPPEQYADTPLSTASSE
HLIGEEMVLDDASASEIADRCILEAERLFASDEGWTKVLEEDGIFVESKD
VHGPYLKSGVRVVRGLGAIDADADKFYNFQVSREGFQSIDEYLENHRNVD
RHEWVTQPHLKNMEDYELMTNRVEWAYPTQTREFVALDIVDKKRKILISK
SSLHPDRPGGSRYQMETELDETEFVRAVQYYASKVEPLPDGKCLLRMVTW
GEMCDSYTAFWVNKFNAHVFITPKFNRFRRVMAGETVFELSNIVNEAWKL
PKLLMIKPDHAVAKGSNFVDNLRNQGIEAAAAKKAAKAESTNADA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR023393START-like_dom_sf