mRNA_H-paniculata_contig15855.3396.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig15855.3396.1
Unique NamemRNA_H-paniculata_contig15855.3396.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
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BLAST of mRNA_H-paniculata_contig15855.3396.1 vs. uniprot
Match: D8LTJ2_ECTSI (Rab7L, RAB family GTPase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LTJ2_ECTSI)

HSP 1 Score: 363 bits (932), Expect = 2.700e-118
Identity = 176/203 (86.70%), Postives = 189/203 (93.10%), Query Frame = 1 
Query:    1 SQVGKTSLMKRYVANDYTDKRRPTIGADFMTKEIVAGDQPMLLQIWDTAGQERFHGGSLGSGFFRGANAALLVYDVACAVSFEQVAMWREELLVRLDVDPHDFPIVVIGNKVDLTHGLPMDGINGVEKSRVLKWCEMQHMGHIETSAKDGTGVEVAMQAVAMLALDQFRKRERELKINPFLGGGTTLDIANERARQQNTRGCC 609
            S VGKTSLMKRY A D+TD RRPTIGADFMTKE+V GDQPMLLQIWDTAGQERFHGGSLGSGFFRGANAALLVYDVACAVSFEQVAMWREELLVRLDVDPHDFPIVVIGNKVDL  GL MDGI+GV+K+RV+KWCEMQ MGHIETSAKDGTGVEVAMQAVA+LAL+Q RKRER+L +NP LGGGTTLD+A++RARQQ T GCC
Sbjct:  162 SNVGKTSLMKRYAAGDFTDYRRPTIGADFMTKEVVEGDQPMLLQIWDTAGQERFHGGSLGSGFFRGANAALLVYDVACAVSFEQVAMWREELLVRLDVDPHDFPIVVIGNKVDLATGLAMDGIHGVDKTRVMKWCEMQGMGHIETSAKDGTGVEVAMQAVAVLALEQKRKRERDLALNPSLGGGTTLDLADQRARQQRTGGCC 364
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BLAST of mRNA_H-paniculata_contig15855.3396.1 vs. uniprot
Match: A0A7S2RVV0_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RVV0_9STRA)

HSP 1 Score: 218 bits (554), Expect = 3.930e-63
Identity = 105/203 (51.72%), Postives = 143/203 (70.44%), Query Frame = 1 
Query:    1 SQVGKTSLMKRYVANDYTDKRRPTIGADFMTKEIVAGDQPMLLQIWDTAGQERFHGGSLGSGFFRGANAALLVYDVACAVSFEQVAMWREELLVRLDVDPHDFPIVVIGNKVDLTHGLPMDGINGVEKSRVLKWCEMQHMGHIETSAKDGTGVEVAMQAVAMLALDQFRKR-ERELKINPFLGGGTTLDIANERARQQNTRGC 606
            S VGKTSLM+R+  N +++ RR T GADF +K +    Q ++LQIWDTAGQERFH G+LG  F+RGA+AALLVYD   A SF+QV  WR E+L R+DV P DFP+VV+GNKVD+    PMDGI+GV+K+ V +WC     GHIETSAKDGTGV+VAM+A+  LAL + +   +R  ++N   G   +++++    + + + GC
Sbjct:   15 SNVGKTSLMRRFCKNSFSEARRATTGADFSSKRMSFAGQEVMLQIWDTAGQERFHHGTLGGAFYRGADAALLVYDATSASSFKQVENWRSEVLSRIDVAPGDFPLVVVGNKVDMEGNTPMDGIHGVDKAAVTEWCRAHGTGHIETSAKDGTGVQVAMEAIGTLALARRKAGVQRIARMNSLTGAKDSVNLSTSFRKGETSSGC 217
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BLAST of mRNA_H-paniculata_contig15855.3396.1 vs. uniprot
Match: F0Y7J9_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y7J9_AURAN)

HSP 1 Score: 178 bits (452), Expect = 4.700e-49
Identity = 92/172 (53.49%), Postives = 120/172 (69.77%), Query Frame = 1 
Query:    1 SQVGKTSLMKRYVANDYTDKRRPTIGADFMTKEIVAGDQPMLLQIWDTAGQERFHGGSLGSGFFRGANAALLVYDVACAVSFEQVAMWREELLVRLDVDPHDFPIVVIGNKVDLTHGLPMDGINGVEKSRVLKWCEMQHMGHIETSAKDGTGVEVAMQAVAMLALDQFRKRE 516
            S VGKTSL+ ++V   +T  RR T GADF +K +  GD+ + L IWDTAGQERFH G+LG  F+RGA+AALLVYD     +FEQ+ MWR ELL R+D  P +FP+VV+GNKVD+ +          E++ V++WC    +G   TSAKDGTGV VAM+AVAMLAL+  R+R+
Sbjct:   19 SNVGKTSLLMQFVHGKFTPARRVTTGADFASKVLHLGDREVRLVIWDTAGQERFHHGTLGGAFYRGADAALLVYDTTDIRTFEQIEMWRRELLQRIDGPPEEFPVVVVGNKVDVPNKTREH-----EQAAVVRWCRDLGIGLCLTSAKDGTGVAVAMEAVAMLALENKRRRQ 185
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BLAST of mRNA_H-paniculata_contig15855.3396.1 vs. uniprot
Match: A0A482SWX8_9ARCH (GTP-binding protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SWX8_9ARCH)

HSP 1 Score: 177 bits (449), Expect = 8.580e-49
Identity = 95/196 (48.47%), Postives = 123/196 (62.76%), Query Frame = 1 
Query:   19 SLMKRYVANDYTDKRRPTIGADFMTKEIVAGDQPMLLQIWDTAGQERFHGGSLGSGFFRGANAALLVYDVACAVSFEQVAMWREELLVRLDVDPHDFPIVVIGNKVDLTHGLPMDGINGVEKSRVLKWCEMQHMGHIETSAKDGTGVEVAMQAVAMLALDQFRKRERELKINPFLGGGTTLDIANERARQQNTRGC 606
            S   R+    ++  RRPT+G+DF TK++V  D  + LQIWDTAGQERF+ GS+GS FFRGA+ ALLVYDV    S EQ+A WREE L R   D + FP+VVIGNK+D+   +P++    V+ S VL WC     GHIETSAKDG GVE AM A+  LAL+  R R+R   +N  +GG      +    ++    GC
Sbjct:    9 SSFDRFATGRFSGLRRPTVGSDFQTKKMVVHDVEVTLQIWDTAGQERFNQGSIGSAFFRGAHGALLVYDVNDEKSIEQIAQWREECLSRQLEDEY-FPMVVIGNKIDVREKIPVE--RRVDVSGVLTWCREHSYGHIETSAKDGHGVEAAMLAITGLALENMRNRQRR-NVNAAMGGEKVNLESKYEVKKSGCEGC 200
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BLAST of mRNA_H-paniculata_contig15855.3396.1 vs. uniprot
Match: A0A8J2S8J0_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2S8J0_9STRA)

HSP 1 Score: 161 bits (407), Expect = 5.520e-42
Identity = 91/204 (44.61%), Postives = 123/204 (60.29%), Query Frame = 1 
Query:    1 SQVGKTSLMKRYVANDYTDKRRPTIGADFMTKEIVAGDQPMLLQIWDTAGQERFHGGSLGSGFFRGANAALLVYDVACAVSFEQVAMWREELLVRLDVDPHDFPIVVIGNKVDLTHGLPMDGINGVEKSRVLKWCEMQHMGHIETSAKDGTGVEVAMQAVAMLALDQFRKRERELKINPFLGGGTTLDIANERARQQN-TRGCC 609
            S VGK+SL++RY  N +  +RR T+GADF +K I  G++ + L IWDTAGQERFH G++G  F+RGA+ ALLVYD     +F QV +WR ELL R+D  P  FPIV +GNK+DL      D     E      WC    +G +  SA DGTGV VAM+AVA LAL+  ++R+      P      +L + +  AR++  +  CC
Sbjct:   68 SNVGKSSLLERYTKNSFRPERRVTLGADFASKVIEVGEERVRLVIWDTAGQERFHHGTIGGAFYRGADGALLVYDTTDFATFAQVELWRRELLQRVD-GPEAFPIVCVGNKMDLPCPTRSDDEKAAEA-----WCAAHGVGLLFASACDGTGVAVAMEAVAALALENKKRRQALGVTKP-----PSLSLDDLHAREKRGSSNCC 260
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BLAST of mRNA_H-paniculata_contig15855.3396.1 vs. uniprot
Match: A0A7S3K3U1_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3K3U1_9STRA)

HSP 1 Score: 154 bits (390), Expect = 4.910e-40
Identity = 93/209 (44.50%), Postives = 125/209 (59.81%), Query Frame = 1 
Query:    1 SQVGKTSLMKRYVANDYTDKRRPTIGADFMTK--EIVAGDQPMLLQIWDTAGQERFHGGSLGSGFFRGANAALLVYDVACAVSFEQVAMWREELLVRLDVDPHDFPIVVIGNKVDLTHGLPMDGINGVEKSRVLKWCEMQHMGHIETSAKDGTGVEVAMQAVAMLALDQFRKRERELKINPFLGGGTTLDI----ANERARQQNTRGCC 609
            S VGKTSL+ +++   +   RR T GADF ++  EI  G + + L IWDTAGQERFH G+LG+ F+RGA+ ALLVYD     SFEQ+ MWR ELL R+   P +FP+VV+GNK+D+    P +  +  E + V KWC    +G   TSAKDGTGV  AM+A+A LA +   K+ R    +  L    TL +     N R    ++  CC
Sbjct:   20 SNVGKTSLLTQFIHGRFDSTRRATTGADFASRVLEIDQG-RKIRLVIWDTAGQERFHHGTLGNAFYRGADGALLVYDTTDIRSFEQIEMWRGELLQRVQGPPDEFPVVVVGNKIDI----PSETRDS-EFAAVQKWCRDLGIGICLTSAKDGTGVLAAMEAIAHLAYEA--KQRRGKSSHSSLNDRDTLALDNIRRNNRGAVDSSSSCC 220
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BLAST of mRNA_H-paniculata_contig15855.3396.1 vs. uniprot
Match: A0A7S3H9L0_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3H9L0_9STRA)

HSP 1 Score: 153 bits (387), Expect = 9.010e-40
Identity = 91/207 (43.96%), Postives = 126/207 (60.87%), Query Frame = 1 
Query:    1 SQVGKTSLMKRYVANDYTDKRRPTIGADFMTKEIVAGDQPMLLQIWDTAGQERFHGGSLGSGFFRGANAALLVYDVACAVSFEQVAMWREELLVRLDV-DPHDFPIVVIGNKVDLTHGLPMDGINGVEKSRVLKWCEMQH---MGHIETSAKDGTGVEVAMQAVAMLALDQFRKRERELKINPFLGGGTTLDIANERARQQNTRGCC 609
            S VGKTSLM +YV   ++ + + TIGADF+TKE++  D+ + LQIWDTAGQERF   SLG  F+RGA+A +LV+D+    SFEQ+  WREE L + +  DP +F  VVIGNKVD       +    V KS+V +WC+ Q    + + ETSAKD T VEVA    A  AL Q          + F+    T++++ + A  +++ GCC
Sbjct:   17 SGVGKTSLMNQYVNQRFSSQYKATIGADFLTKEVMIDDKLVTLQIWDTAGQERFQ--SLGVAFYRGADACILVHDITAEKSFEQLNSWREEFLAQANPRDPDNFSFVVIGNKVD------KESERRVPKSKVTQWCKSQGPKPIPYFETSAKDATKVEVAFLEAAQAALHQ-----DSADSDVFIPD--TINLSKQTAPAKSSGGCC 208
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BLAST of mRNA_H-paniculata_contig15855.3396.1 vs. uniprot
Match: D2VAL1_NAEGR (Rab family small GTPase n=2 Tax=Naegleria TaxID=5761 RepID=D2VAL1_NAEGR)

HSP 1 Score: 152 bits (385), Expect = 1.550e-39
Identity = 86/205 (41.95%), Postives = 125/205 (60.98%), Query Frame = 1 
Query:    1 SQVGKTSLMKRYVANDYTDKRRPTIGADFMTKEIVAGDQPMLLQIWDTAGQERFHGGSLGSGFFRGANAALLVYDVACAVSFEQVAMWREELLVRLDV-DPHDFPIVVIGNKVDLTHGLPMDGINGVEKSRVLKWCEMQ-HMGHIETSAKDGTGVEVAMQAVAMLALDQFRKRERELKINPFLGGGTTLDIANERARQQNTRGCC 609
            S VGKTSLM +YV   ++++ + TIGADF+TKE++  D+ + +QIWDTAGQERF   SLG  F+RGA++ +LV+D   A +FE +  WR+E L++    DP +FP VVI NK+DL   +       V + R L WC+ + ++ + E SAK+GT VE A Q +A  AL     +E +    P+ GG +  +  +E   Q    GCC
Sbjct:   17 SGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQERFQ--SLGVAFYRGADSCVLVFDATVAKTFENINSWRDEFLIQAGPPDPDNFPFVVIANKIDLDQRI-------VPQKRALAWCKAKGNIPYFECSAKEGTNVEQAFQTIARNALG----KEED---TPYTGGQSITEFPDE--PQPKKSGCC 203
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BLAST of mRNA_H-paniculata_contig15855.3396.1 vs. uniprot
Match: A0A8H6YCD6_9AGAR (Putative GTPase Rab7 protein n=1 Tax=Mycena venus TaxID=2733690 RepID=A0A8H6YCD6_9AGAR)

HSP 1 Score: 152 bits (384), Expect = 3.140e-39
Identity = 83/186 (44.62%), Postives = 119/186 (63.98%), Query Frame = 1 
Query:    7 VGKTSLMKRYVANDYTDKRRPTIGADFMTKEIVAGDQPMLLQIWDTAGQERFHGGSLGSGFFRGANAALLVYDVACAVSFEQVAMWREELLVRLDV-DPHDFPIVVIGNKVDLTHGLPMDGINGVEKSRVLKWCEMQ-HMGHIETSAKDGTGVEVAMQAVAMLALDQFRKRERELKINPFLGGGTT 558
            VGKTSLM +YV   ++++ + TIGADF+TKEI+  D+P+ +Q+WDTAGQERF   SLG  F+RGA+  +LVYDV  A SFE +  WR+E L++    DP +FP VV+GNK+D+      +    V + R + WC+ + ++ + ETSAK+   VE A QAVA  AL Q ++    +     LG G +
Sbjct:   32 VGKTSLMNQYVNKRFSNQYKATIGADFLTKEIMVDDRPVTMQLWDTAGQERFQ--SLGVAFYRGADCCVLVYDVNNAKSFEALDSWRDEFLIQASPHDPENFPFVVLGNKIDVE-----ENKRQVSQKRAMAWCQSKGNIPYFETSAKEAINVEQAFQAVAKNALQQVQEEPPYVDYPIQLGPGNS 210
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BLAST of mRNA_H-paniculata_contig15855.3396.1 vs. uniprot
Match: A0A0C2XM57_AMAMK (Uncharacterized protein n=4 Tax=Agaricales TaxID=5338 RepID=A0A0C2XM57_AMAMK)

HSP 1 Score: 151 bits (382), Expect = 4.270e-39
Identity = 79/169 (46.75%), Postives = 112/169 (66.27%), Query Frame = 1 
Query:    1 SQVGKTSLMKRYVANDYTDKRRPTIGADFMTKEIVAGDQPMLLQIWDTAGQERFHGGSLGSGFFRGANAALLVYDVACAVSFEQVAMWREELLVRLDV-DPHDFPIVVIGNKVDLTHGLPMDGINGVEKSRVLKWCEMQ-HMGHIETSAKDGTGVEVAMQAVAMLALDQ 501
            S VGKTSLM +YV   ++++ + TIGADF+TKE++  D+P+ +Q+WDTAGQERF   SLG  F+RGA+  +LVYDV  + SFE +  WR+E L++    DP +FP VV+GNK+D+      +    V + R + WC+ + ++ + ETSAKD   VE A Q VA  AL Q
Sbjct:   14 SGVGKTSLMNQYVNKRFSNQYKATIGADFLTKEVIVDDRPVTMQLWDTAGQERFQ--SLGVAFYRGADCCVLVYDVNSSKSFETLDSWRDEFLIQASPHDPENFPFVVLGNKIDVE-----ENKRQVTQKRAMTWCQSKGNIPYFETSAKDAINVEQAFQTVAKNALQQ 175
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig15855.3396.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LTJ2_ECTSI2.700e-11886.70Rab7L, RAB family GTPase n=2 Tax=Ectocarpus TaxID=... [more]
A0A7S2RVV0_9STRA3.930e-6351.72Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
F0Y7J9_AURAN4.700e-4953.49Uncharacterized protein n=1 Tax=Aureococcus anopha... [more]
A0A482SWX8_9ARCH8.580e-4948.47GTP-binding protein n=1 Tax=archaeon TaxID=1906665... [more]
A0A8J2S8J0_9STRA5.520e-4244.61Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A7S3K3U1_9STRA4.910e-4044.50Hypothetical protein n=1 Tax=Aureoumbra lagunensis... [more]
A0A7S3H9L0_9STRA9.010e-4043.96Hypothetical protein n=1 Tax=Spumella elongata Tax... [more]
D2VAL1_NAEGR1.550e-3941.95Rab family small GTPase n=2 Tax=Naegleria TaxID=57... [more]
A0A8H6YCD6_9AGAR3.140e-3944.62Putative GTPase Rab7 protein n=1 Tax=Mycena venus ... [more]
A0A0C2XM57_AMAMK4.270e-3946.75Uncharacterized protein n=4 Tax=Agaricales TaxID=5... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig15855contigH-paniculata_contig15855:720..4793 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score350.5
Seed ortholog evalue5e-94
Seed eggNOG ortholog2880.D8LTJ2
KEGG koko:K07897
KEGG Pathwayko04137,ko04138,ko04140,ko04144,ko04145,ko05132,ko05146,ko05152,map04137,map04138,map04140,map04144,map04145,map05132,map05146,map05152
Hectar predicted targeting categoryother localisation
EggNOG free text desc.GTPase activity
EggNOG OGsKOG0394@1,KOG0394@2759
Ec32 ortholog descriptionRab7L, RAB family GTPase
Ec32 orthologEc-02_005820.1
COG Functional cat.K
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko04031,ko04131,ko04147
Exons4
Model size1696
Cds size588
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig15855.3396.1prot_H-paniculata_contig15855.3396.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig15855 1804..4769 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929265.0956914-UTR-H-paniculata_contig15855:719..18031622929265.0956914-UTR-H-paniculata_contig15855:719..1803Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig15855 720..1803 -
1691480793.374335-UTR-H-paniculata_contig15855:719..18031691480793.374335-UTR-H-paniculata_contig15855:719..1803Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig15855 720..1803 -
1622929265.1507668-UTR-H-paniculata_contig15855:4769..47931622929265.1507668-UTR-H-paniculata_contig15855:4769..4793Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig15855 4770..4793 -
1691480793.4232879-UTR-H-paniculata_contig15855:4769..47931691480793.4232879-UTR-H-paniculata_contig15855:4769..4793Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig15855 4770..4793 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929265.1108017-CDS-H-paniculata_contig15855:1803..20011622929265.1108017-CDS-H-paniculata_contig15855:1803..2001Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig15855 1804..2001 -
1691480793.390436-CDS-H-paniculata_contig15855:1803..20011691480793.390436-CDS-H-paniculata_contig15855:1803..2001Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig15855 1804..2001 -
1622929265.120004-CDS-H-paniculata_contig15855:2972..31341622929265.120004-CDS-H-paniculata_contig15855:2972..3134Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig15855 2973..3134 -
1691480793.398525-CDS-H-paniculata_contig15855:2972..31341691480793.398525-CDS-H-paniculata_contig15855:2972..3134Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig15855 2973..3134 -
1622929265.1288066-CDS-H-paniculata_contig15855:3730..38501622929265.1288066-CDS-H-paniculata_contig15855:3730..3850Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig15855 3731..3850 -
1691480793.4083226-CDS-H-paniculata_contig15855:3730..38501691480793.4083226-CDS-H-paniculata_contig15855:3730..3850Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig15855 3731..3850 -
1622929265.1378825-CDS-H-paniculata_contig15855:4661..47691622929265.1378825-CDS-H-paniculata_contig15855:4661..4769Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig15855 4662..4769 -
1691480793.4155328-CDS-H-paniculata_contig15855:4661..47691691480793.4155328-CDS-H-paniculata_contig15855:4661..4769Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig15855 4662..4769 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig15855.3396.1

>prot_H-paniculata_contig15855.3396.1 ID=prot_H-paniculata_contig15855.3396.1|Name=mRNA_H-paniculata_contig15855.3396.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=196bp
MKRYVANDYTDKRRPTIGADFMTKEIVAGDQPMLLQIWDTAGQERFHGGS
LGSGFFRGANAALLVYDVACAVSFEQVAMWREELLVRLDVDPHDFPIVVI
GNKVDLTHGLPMDGINGVEKSRVLKWCEMQHMGHIETSAKDGTGVEVAMQ
AVAMLALDQFRKRERELKINPFLGGGTTLDIANERARQQNTRGCC*
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mRNA from alignment at H-paniculata_contig15855:720..4793-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig15855.3396.1 ID=mRNA_H-paniculata_contig15855.3396.1|Name=mRNA_H-paniculata_contig15855.3396.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=4074bp|location=Sequence derived from alignment at H-paniculata_contig15855:720..4793- (Halopteris paniculata Hal_grac_a_UBK monoicous)
TCGCAGGTAGGTAAAACAAGTTTGATGAAGAGATACGTTGCAAACGATTA
CACCGACAAGCGCAGACCAACAATAGGAGCGGATTTCATGACCAAGGAAA
TTGTGGCGGGGGATCAACCAATGCTTCTACAGGTGATATAAAATACTTCT
ACGGGTGATATATCAATTTGTAATTTCAGAGTAGCACCCAAACATATCTC
GCTATATATATTTTTGAATGAATTAACACGTCAAAGGACCCACTAGCCTA
GCCGTCGCTGTACTATTGTACTGCTACCTGGTTCGACCGATAATCGGAGA
TGTCCATTAAGATTGAGTCAATCATGAAAATATGTATGTATTGGTGCGCG
CATCGTCAGAGCGTACCGCAACTACTGCTCTCAGCCGAAACGTGTGGACA
TGATGACGATATTCGAGACCTGTTGATTTTTTTTTTTTTTCCGTTGTATT
GGGTAGCTGTGGGTAATGATGCAGTTCGTGATTTTGCAGGTATCGATTTA
CGTAAGCCACTACTGTTAAGGAATTTCTGTAAAAGTTATAACTGGCATCA
CCACAAAGCGTAGTTCTAGTTAATTGCACTGATGCAAACTTTGAATGTAT
GACCTGCGGTACAACAGTACGATTGCAATCGGGTGAGACAAGAACAAGTT
GTCCTGCGTGTTGTGGGTGTTGTTAAAAACATACCAATTTCTCACTGAAC
CGAGTTGCAGCTTTTTCGCCTACAACACGCTTCTTCTCCATTACTATCTT
TGTCGTCCTGTTTGCAGGTGACCCATTGCGTGCTGTATGATAAGGTCATG
AATGGCGGCAGTAATATCAGTCGCGCTCGTATTGTTTTTGTTGTTGTTTA
TCTGCTATGATATGATGCTACGTAATATTGACTAGACGCTTGCGTTGACA
CGTCCTGAATGCGAATGCCTGGTGGTGAATGTGATGCATCCAGATTTGGG
ACACAGCAGGGCAGGAGCGATTTCACGGAGGATCTTTGGGATCGGGATTT
TTTCGAGGAGCAAACGCAGCGCTTCTGGTGTACGACGTTGCGTGCGCTGT
TTCGTTTGAGCAGGTTTGCTATCCTATGCTGTGCTATGCTCTTGGTTCTT
TCAGGCGACGTGAATCAGACAAGTTTAAATATTTCACGTGTGATGAGGAG
AAAACCATAAGAGTCAGATGGGCGTCATGTCGAGGACCTATCATATTATG
GCTATCTACAAGGCCTAGCTTGTTGGTCAGACAAGGTGTATGGGTGTGAC
CAGTGCTGCAGCAGGGTCAGTGATATTCCACGTCTCAGCTCCTACGCAAC
AGGCACGAGCGTGTTCGTTTTTCCTTGGTTGAAGTTATGTAGTGAAATCA
ACATATCGCGATGTGGTGATATTGTGTCCTGTAAATCGAGTGCAATCCGT
CAATCCGTTACCCGGCCCACCATACAAAGTCGAGTTTTTCAGTATTTCTG
CGAGCACCAAGGAACTTCAAGTATTCCCGCTATCAAAAGCTCCAAGGGGT
TATCGTATAGTATAGTATAGTATAGTGTAGCAGCGTCGTGTTGTGAATCA
CTGACGGAACAATCACCACAATAGTTGTGCTGCTCCACCACGCACCATCT
GGTGTACTTTACTATTGTGCATGCCTGTCTTTCATACTGCTTGTCGCTTA
CTTGTGTAGGTCGCGATGTGGAGAGAGGAGCTCCTAGTGCGATTGGACGT
TGACCCGCACGACTTTCCCATAGTCGTGATTGGAAACAAGGTGGACTTGA
CGCATGGTTTGCCGATGGACGGTATCAACGGCGTCGAGAAGAGCAGGGTC
CTCAAATGGTGTGAGATGCAGGTGCGGTATGACGAGATATAGTAGATAAT
TTGTTATCCTCTATCCTCAAATGGCGAGAGGACGTACGTCCTGTCTTGAC
AGATATCCTCAGATTTGCTTGTATCTGTTCTTATTTGTTTACGTTCGAAC
AGAGGTATAGTGCGTCTGGGTGTTGAGCCTGCAATTCCTTCTGATCCTAT
CGTTGAGATCGTGCTGTGTAGGGTAGGTATACTCGAGTATTGAACAAATG
TATATGGTAGTATACTCGCTCGCTGCGCTGGTGTTGCGACCGAATTTGGA
AGAGAACGCCTACCCCTGCCTGCGGTTAACGTTATTTCTAGCCTCTGCGG
GGAAAGAATCGCCGGACGAATCTCGAGAAACCTGGTACAAGCATTGTGCG
GAGCCTTGGCGGCGTTACAGAGCTAGACAGCGGTTGTAATTTCATCTTCC
CACCGTCAACGATAGGGCAAGTAGAAGCCGCAATTTACCTGGTATATATA
TATACCTACCCGAGTTGTGGATCTGAGAGTGCTGTTACACGTATAGCGCA
AGACCACGTATATGACCTTCGAAGGCGACAAGCAAGGTGGTAAGATCCAG
ACGCAAGCTGCGCTTATGAGTATCGAACCAAGCGTTATTGGCTCTGAATT
TTACGAGGTTTGTGCGGAACAGTCGTGGCAGATAGTGCTGTATCCACTTG
GCGACGCAATGCCGATGCTCCACTACCCACTTGAAGGCAAGGATTGTGTT
TCGAGACTCTAGAAACTAGAAATACTCTCCCCTCTTCTCGCATGGGAGCG
ATTGGCCATCGAAGGTTGGGCTTATCTCCTAAGGCCGTGCTAAATGAGCG
AGCTTGATTACATGGCGACGGTATACAAACTCTCCAAAAAACAAGAATCG
GAAAACGGAAAATCAATCTCACTCGTTTAGCGCGGGTTTTATACGAACCA
AGCTCCATCTTGTCAAGGATGCCTGACCGTCTTGTTGTGCAGCACATGGG
ACACATCGAAACTAGCGCGAAGGATGGAACTGGAGTAGAAGTGGCGATGC
AGGCTGTGGCAATGCTGGCTTTAGACCAGTTCCGCAAGCGAGAGCGAGAG
CTGAAGATCAACCCTTTCCTCGGAGGAGGAACAACGCTGGATATTGCGAA
CGAACGCGCGCGACAGCAGAACACTCGAGGGTGCTGTTGAGAGTAGAGAC
CTAACAGTTGAAAGAGGGGCGATCCCGCTATCCATCATGTCCCCCTCAAG
ACTCCATCCACACCCAAGCAAAACGTTGTATAGAGTAGTTTTCAGAGCTT
TGTGCTCATTTTTACCGTATTGTGTTCTTTGAGGTGATATGTTTTGTCTT
GTGCGCATGCTTGATGTCTGTTTGGTGTTTTGTGAGGGGGGGGGAGAATG
GTGGACAGTGTTACGTTTCATGTCATGTGCTATGCTATACATATATATAT
ATGTTGGTGAACTTTGCCTGGGGCCGGCGCATCTGGCACTGCATTTAGTA
ATTCTCGTTAAATCATGTGTACATGACGAAAACGATAGCTCAAGAGCAGC
AAGGGTACTTATCTTCGCGTAAAACTGTTTGCTCTACGGATATTTTTTTG
AAACCTGAATTGCAACATAAGCAGCAGTAGGAGCAGGAGCGTGCACACAT
CGTACCAATTTTTGCCTTGCTGCCGTACTTGTATGATGATGTACCTATAC
TGTATGATCACGTCGTTCGTTTTATCCTCTAGCTTCCGCGTACTGTCTTA
TTGAGGTTATCTGACTTCTGCCATGAAGGATATCGTGACCGAAAGGTTCC
ACACGTCGGACGGATCAATATCCGTACGATCTGTGTGGGACGCATCAGTG
GTAGATATATGTGCGAACGATCTGTAGGGTACGAATCAGTAGTGTAGATG
ATTTGCGAACGATTCGCAGATGTACGGATTACCGGAGCGAAACATAAACT
TGTTCGGTGTGAGGATCACTGGTGGAGATTATGTGCATACGATCCGCGGG
TGTATGGATCACCTCTGTTAAACATGTACGGATCGTTAATGCATATCATG
TGCAAACGATCTTTAAGGGTACGGATCACCAGTGCGAAACATGTGCGAAT
CAAACACGATGTACGGACCGCTTATGCAAAACATGCACTGGCGATTCGTC
TCGAATGGATCAATATGGACAAGCATTTACTCACGATCCATCCCCCATAG
ATCAGTTTTACACATCACTGGGGGAACAATCCGTAGGGCACAGCTCAGTG
GCGCAAAGAAGTACTAGCAATCCG
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Coding sequence (CDS) from alignment at H-paniculata_contig15855:720..4793-

>mRNA_H-paniculata_contig15855.3396.1 ID=mRNA_H-paniculata_contig15855.3396.1|Name=mRNA_H-paniculata_contig15855.3396.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1176bp|location=Sequence derived from alignment at H-paniculata_contig15855:720..4793- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGAAGAGATACGTTGCAAACGATTACACCGACAAGCGCAGACCAACAAT
AGGAGCGGATTTCATGACCAAGGAAATTGTGGCGGGGGATCAACCAATGC
TTCTACAGATGAAGAGATACGTTGCAAACGATTACACCGACAAGCGCAGA
CCAACAATAGGAGCGGATTTCATGACCAAGGAAATTGTGGCGGGGGATCA
ACCAATGCTTCTACAGATTTGGGACACAGCAGGGCAGGAGCGATTTCACG
GAGGATCTTTGGGATCGGGATTTTTTCGAGGAGCAAACGCAGCGCTTCTG
GTGTACGACGTTGCGTGCGCTGTTTCGTTTGAGCAGATTTGGGACACAGC
AGGGCAGGAGCGATTTCACGGAGGATCTTTGGGATCGGGATTTTTTCGAG
GAGCAAACGCAGCGCTTCTGGTGTACGACGTTGCGTGCGCTGTTTCGTTT
GAGCAGGTCGCGATGTGGAGAGAGGAGCTCCTAGTGCGATTGGACGTTGA
CCCGCACGACTTTCCCATAGTCGTGATTGGAAACAAGGTGGACTTGACGC
ATGGTTTGCCGATGGACGGTATCAACGGCGTCGAGAAGAGCAGGGTCCTC
AAATGGTGTGAGATGCAGGTCGCGATGTGGAGAGAGGAGCTCCTAGTGCG
ATTGGACGTTGACCCGCACGACTTTCCCATAGTCGTGATTGGAAACAAGG
TGGACTTGACGCATGGTTTGCCGATGGACGGTATCAACGGCGTCGAGAAG
AGCAGGGTCCTCAAATGGTGTGAGATGCAGCACATGGGACACATCGAAAC
TAGCGCGAAGGATGGAACTGGAGTAGAAGTGGCGATGCAGGCTGTGGCAA
TGCTGGCTTTAGACCAGTTCCGCAAGCGAGAGCGAGAGCTGAAGATCAAC
CCTTTCCTCGGAGGAGGAACAACGCTGGATATTGCGAACGAACGCGCGCG
ACAGCAGAACACTCGAGGGTGCTGTTGACACATGGGACACATCGAAACTA
GCGCGAAGGATGGAACTGGAGTAGAAGTGGCGATGCAGGCTGTGGCAATG
CTGGCTTTAGACCAGTTCCGCAAGCGAGAGCGAGAGCTGAAGATCAACCC
TTTCCTCGGAGGAGGAACAACGCTGGATATTGCGAACGAACGCGCGCGAC
AGCAGAACACTCGAGGGTGCTGTTGA
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