prot_H-paniculata_contig15850.3394.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig15850.3394.1
Unique Nameprot_H-paniculata_contig15850.3394.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length380
Homology
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BLAST of mRNA_H-paniculata_contig15850.3394.1 vs. uniprot
Match: D7FIP0_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FIP0_ECTSI)

HSP 1 Score: 276 bits (706), Expect = 4.650e-87
Identity = 160/325 (49.23%), Postives = 210/325 (64.62%), Query Frame = 0 
Query:   57 LPEAVRAIIEECKAQQHEQQLAATTNVGGEAGGTLPYPCRMYE-SVPGEEELLQLQWMRIDMSTMDSEECWGEPSGCQEDYDCGPGSGLLLPAVYSVDPGQASTIPFIFPMTFVGLPSELMR-VQGDDEGSRRALPQEIPEDSLCKLGADITDLLS--QALERRGESLSDGLIHAVASLSQKDWDVCLERHVDLRKCNPSSFVELVSTCTPPTLDCLLGTVLPSLVAQIST---SQQESTSASAIESNAGIRKRKGGSSESEESCNDESALKAIRNLCRLGGAVAKAER--QDPIRFRNKISGSGLRNLGVVGREAEVALAEAFF 372
            LP AVRAI+EEC+A+      A       +AG  LPYPCRMYE S+PGEE +LQLQWMR+DMS MDSE CWGE S    ++DCGP SGL+LPAVYS+DP Q      + P T +GLP EL R +QG ++G  +    +IPED L KLG  +T+  S      RR E L   +I  VASLS+ DW VCLER+VD R+C+P++  +++   +PPTLDCLLGTVLP LV +IS+   + +  TS+     ++    R GG   +  + N +    A+  +CRL  +VA + R   DP+ FR+K+SGS LR LG +G+EAEVALAEAFF
Sbjct:   30 LPAAVRAIVEECRAKS-----ANPPPPEQQAGEVLPYPCRMYEESIPGEEGMLQLQWMRLDMSNMDSERCWGEAS-LDGEHDCGPDSGLVLPAVYSMDPAQ------VLPPTMIGLPPELQRDLQGSNDGFCQWASDDIPEDHLFKLGEKLTEAFSGEPGGSRRAEGLPPDVIAEVASLSRTDWSVCLERYVDFRRCDPTAIAQVLLAASPPTLDCLLGTVLPGLVTKISSLSAAAKAPTSSETGTKDSSASGRNGGEQAATSAGNGQRNTAALLAICRLAASVAASVRGDADPVAFRDKVSGSELRKLGALGKEAEVALAEAFF 342
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig15850.3394.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FIP0_ECTSI4.650e-8749.23Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig15850contigH-paniculata_contig15850:330..3534 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig15850.3394.1mRNA_H-paniculata_contig15850.3394.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig15850 110..3534 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig15850.3394.1 ID=prot_H-paniculata_contig15850.3394.1|Name=mRNA_H-paniculata_contig15850.3394.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=380bp
MSNNTPPSTPEDNGSNSIRTWSQFEAARASSAAREDSSQASSSSSSCSAD
SSNAPQLPEAVRAIIEECKAQQHEQQLAATTNVGGEAGGTLPYPCRMYES
VPGEEELLQLQWMRIDMSTMDSEECWGEPSGCQEDYDCGPGSGLLLPAVY
SVDPGQASTIPFIFPMTFVGLPSELMRVQGDDEGSRRALPQEIPEDSLCK
LGADITDLLSQALERRGESLSDGLIHAVASLSQKDWDVCLERHVDLRKCN
PSSFVELVSTCTPPTLDCLLGTVLPSLVAQISTSQQESTSASAIESNAGI
RKRKGGSSESEESCNDESALKAIRNLCRLGGAVAKAERQDPIRFRNKISG
SGLRNLGVVGREAEVALAEAFFDRRSGQP*
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