|
|
Homology
BLAST of mRNA_H-paniculata_contig15825.3385.1 vs. uniprot
Match: D7FXP6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXP6_ECTSI) HSP 1 Score: 187 bits (474), Expect = 1.130e-44 Identity = 285/851 (33.49%), Postives = 354/851 (41.60%), Query Frame = 1
Query: 1 NRATFPTPVTQKRTSGSWSGCGNYLAVSSGGEIRVYRPWPTG-----LAAVKTGCGAVNSKAQARNGGLV----RDGWIAPNRPSARAVVDSSRHRCGVPSTSHTDMNVTAQDG---EGGGSTSPCVSGT--EFRTVLCVEALMKAVSGGASGSSSPMSSXXXXXXXXXXXXXSRMRRSLAPLRKAESLNAKSMSVAEDHDRLLSSLQVEEETPAVFGLCSRKKGGXXXXXXXXXXXXXXXXXXXSSPA--IGDMRAMCPGGPNAFFGTTDGCLGLGSLLGGLGLPYSPAVDTQSRRCLNDSFFGSSNARGGHGGGGTLAGDTLLASGVVDNSNKRAEAEEEPAAALGMETSAVSRTDSVTGYISGGLQLPEPXXXXLTARRRGGFRNVLPGQNWQAGVLRPT---------RSKGKDP-TAETPRRTKSQPRSSAFLSDPGVTAAAKVSALSLGEAGAVAHGSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFVDAGSSPPSSEVLDLRGKLGDGS-------IAVHAVHPLLRLPLGGEGEGGGGAAITNVSCRSLAPVGGDTGPGVMDEKEHGSVGNGTGRG-PLGDRKDSS---RQPCLVLVTTGFPDSGQKVPGTGESGRGAVDVKAVATLPPALSSPDLVAASEDGTLVCVGSHACELVACYRVGLPSADTSTVIAPPSVWYSASCPSKTRSRKRRVCPARAICTLRLPQGLRAKGLVF-----ANGESPESAG-NKSSGGEGLLSRRGIM-----VLVLAAAPVAAPFATLSRGARSSFGSSMRADRASSXXXXXXXXXXXXXXXXXXXXXXXXXSHVSSYRTVLLRYLLPAMAVDDAQG 2409
+R P PV +KRT G+WSGCG LA+SSGGEIRVY G ++ G V S+ GL R GW +P + V + G EG + C G +FRT+LCVEA M G SSP SS R S +PL A+S R+ + + P R G XXXX SS IGDMRAMCP G FFGTT G LGL S A+ + + F G GG T G+ LL + VVD+SNK +A S D+V+ A RRGGFR+ LPG+NW AG LRPT R +G+D + E+P A L + TAA + ++ GE+ + SS XXXXXXXXXXXXXXXXXXX GKLG+G+ + + HPL RL L G GE + S SL G G +G +GR P R S R+PCLV V+ SG G G V V + +LP L+SPDL+A+SEDG +V VGSHAC+LVACYR+ A +T P S C S TR RKRR A +CTLRLP G RAKGL+ A GES + G N S+ GEG + G+M VLVLA V++ AT+ GA ++ R D S SSYRT LLR+ LPA G
Sbjct: 271 SRVVLPAPVVRKRTCGAWSGCGRRLALSSGGEIRVYSDPSEGGSRRPISTAGQARGGVESETVDDAPGLQPAKPRSGWASPGSAXXXXXXXXXXXXXXXXXXALPSATVAREGGLVAEGETGLTGCSGGASRDFRTILCVEAAM-----GGGVFSSPGSSPGST------------RSSPSPLADGGG-GARSGGDGTGLTRIGAPPGTRKSRP------ERASDGTHSSVGPLSPPPXXXXAGVSSSRLLIGDMRAMCPAGSLTFFGTTGGGLGLDS-----------AIAASAPTLSGEPLFA------GGGGQTTHVGEGLLCA-VVDSSNKAC--------------AASSSIDTVSAE--------------KPATRRGGFRHSLPGENWLAGSLRPTSRTLLPNSPRRRGRDSGSPESPLALPVGSSPVAPLEERSSTAAEE--SVPAGESRPTSSESSLLRSTIPAVVDRRXXXXXXXXXXXXXXXXXXXX----------------GKLGNGADGGGAAGMPTPSTHPLFRLSLPG-GEDAASSPAVGSSSISLRDSG----------NRLGRMGTASGRNSPAAGRTTDSTPGRRPCLVRVSC---RSG--------GGDGVVGVATLTSLPSELASPDLLASSEDGRIVAVGSHACDLVACYRLESHPASPATESCLPG--GSGGCESGTRRRKRRHRRAVPLCTLRLPTGYRAKGLMLSRERQARGESAATPGVNSSASGEGATAEDGVMADEVVVLVLAGCAVSSVDATI--GA-----TTPRPDMNESSFAAESHWRGSNSGRPEE----------SSYRTTLLRFSLPAAPATTGNG 992
BLAST of mRNA_H-paniculata_contig15825.3385.1 vs. uniprot
Match: A0A6H5KXC0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXC0_9PHAE) HSP 1 Score: 159 bits (402), Expect = 6.020e-36 Identity = 260/886 (29.35%), Postives = 326/886 (36.79%), Query Frame = 1
Query: 1 NRATFPTPVTQKRTSGSWSGCGNYLAVSSGGEIRVYRPWPTG-----LAAVKTGCGAVNSK----AQARNGGLVRDGWIAPNRPSARAVVDSSRHRCGVPSTSHTDMNVTAQDGEGGGST-----------------------------------------SPCVSGT--EFRTVLCVEALMKAVSGG--ASGSSSPMSSXXXXXXXXXXXXXSRMRRSLAPLRKAESLNAKSMSVAE-DHDRLLSSLQVEEETP---AVFGLCSRKKGGXXXXXXXXXXXXXXXXXXXSSPAIGDMRAMCPGGPNAFFGTTDGCLGLGSLLGGLGLPYSPAVDTQSRRCLNDSFFGSSNARGGHGGGGTLAGDTLLASGVVDNSNKRAEAEEEPAAALGMETSAVSRTDSVTGYISGGLQLPEPXXXXLTARRRGGFRNVLPGQNWQAGVLRPTRSKGKDPTAETPRRTKSQPRSSAFLSDPGVTAAAKVSALSLGEAGAVAHGSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFVDAGSSPPSSEVLDLRGKLG---DGSIAVH----AVHPLLRLPLGGEGEGGGGAAITNVSCRSLAPVGGDTGPGVMDEKEHGSVGNGTGRGPLGDR-----KDSSRQPCLVLVT--TGFPDSGQKVPGTGESGRGAVDVKAVATLPPALSSPDLVAASEDGTLVCVGSHACELVACYRVGLPSADTSTVIAPPSVWYSASCPSKTRSRKRRVCPARAICTLRLPQGLRAKGLVF-----ANGESPESAG-NKSSGGEGLLSRRGI-----MVLVLAAAPVAAPFATLSRGARSSFGSSMRADRASSXXXXXXXXXXXXXXXXXXXXXXXXXSHVSSYRTVLLRYLLPAMAVDDAQG 2409
+R P PV +KRT G+WSGCG LA+SSGGEIRVY G ++A G V S+ A + R GW +P +A A + C G EFRTVLCVEA A+ GG +S SSP + +R L + ++L S E D D SS+ P A G+ S + IGDMRAMCP G AFFGTT G LGL S + G S G GG GG T G+ LL + VVD+SNK +A S D+++ A RRGGFR+ LPG+NW AG LRPT + +PRR RS F S S L+L + V S+ P EV+DLRGKLG DG A + HPL L L GG AA + P G +G + D S R+PCLV V+ +G D G V V +A LP L+SPDL+AASEDG +V VGSHAC+LVACYR+ A +T P + S TR RKRR A +CTLRLP G RAKGL+ A GES + G + S+ GEG + G+ ++LVLA VA+ AT+ ++ R D S SSYRT LLR+ LPA G
Sbjct: 295 SRVVLPAPVVRKRTCGAWSGCGRRLALSSGGEIRVYSDPSEGESRRPISAAGQARGGVESETVGDAPSLQPAKTRSGWASPGSVAAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEEXXXXXXXARYRLTSCSGGASREFRTVLCVEA---AMGGGVFSSPGSSPGGTLSPLSPLADGGGGARSGGDGTGLTQTDALPGTRRSRPERDSDGAHSSVGPLSPPPPAAATAGVSSSRL------------------------LIGDMRAMCPAGSLAFFGTTGGGLGLDSAIAASGPTLS----------------GEPLLAGG-GGQTTHVGEGLLGA-VVDSSNKAC--------------AASSSIDTISA--------------DKLATRRGGFRHALPGENWLAGSLRPT---SRTLLPNSPRR-----RSRDFGSSE--------SPLALPVGSSPVAPLEERSSKAAEESVPIGEPRPTSSESSLLRSTIPDVVGRRSTTP--EVVDLRGKLGNWADGGGAAGMPTASTHPLFCLSL----PGGEDAASS--------PAVGSSGISLRDSXXXXXXXXXXXXXXXXXXXXTTDSTSGRRPCLVRVSCRSGGVD-------------GVVGVATLAFLPSELASPDLLAASEDGRIVAVGSHACDLVACYRLESHPASPATESCLPGGGRGSE--SVTRRRKRRHRRAVPLCTLRLPTGYRAKGLMLSREKQARGESAATPGVHSSASGEGSTAEHGVTADEVVILVLAGCAVASVDATIGT-------TTPRPDMNESSFAAESHWRGSSSGRPEE----------SSYRTTLLRFSLPASPATTGNG 1045
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Ec32 ortholog description | expressed unknown protein |
| Ec32 ortholog | Ec-28_001560.1 |
| Exons | 6 |
| Model size | 3055 |
| Cds size | 3054 |
| Stop | 0 |
| Start | 0 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig15825.3385.1 >prot_H-paniculata_contig15825.3385.1 ID=prot_H-paniculata_contig15825.3385.1|Name=mRNA_H-paniculata_contig15825.3385.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=1018bp
NRATFPTPVTQKRTSGSWSGCGNYLAVSSGGEIRVYRPWPTGLAAVKTGC
GAVNSKAQARNGGLVRDGWIAPNRPSARAVVDSSRHRCGVPSTSHTDMNV
TAQDGEGGGSTSPCVSGTEFRTVLCVEALMKAVSGGASGSSSPMSSPSPR
RSPSPELSPSRMRRSLAPLRKAESLNAKSMSVAEDHDRLLSSLQVEEETP
AVFGLCSRKKGGGGGGGGLSLRSRSSSSRSRSSPAIGDMRAMCPGGPNAF
FGTTDGCLGLGSLLGGLGLPYSPAVDTQSRRCLNDSFFGSSNARGGHGGG
GTLAGDTLLASGVVDNSNKRAEAEEEPAAALGMETSAVSRTDSVTGYISG
GLQLPEPPPPPLTARRRGGFRNVLPGQNWQAGVLRPTRSKGKDPTAETPR
RTKSQPRSSAFLSDPGVTAAAKVSALSLGEAGAVAHGSSSSSSNDNRSNS
NIILADASDSSSTTTTTTTTTFVDAGSSPPSSEVLDLRGKLGDGSIAVHA
VHPLLRLPLGGEGEGGGGAAITNVSCRSLAPVGGDTGPGVMDEKEHGSVG
NGTGRGPLGDRKDSSRQPCLVLVTTGFPDSGQKVPGTGESGRGAVDVKAV
ATLPPALSSPDLVAASEDGTLVCVGSHACELVACYRVGLPSADTSTVIAP
PSVWYSASCPSKTRSRKRRVCPARAICTLRLPQGLRAKGLVFANGESPES
AGNKSSGGEGLLSRRGIMVLVLAAAPVAAPFATLSRGARSSFGSSMRADR
ASSSARASGGSVGSGGSGGSGGGGSGSSSHVSSYRTVLLRYLLPAMAVDD
AQGAGVIPPQDFSSGFLSLKGDEPLPPSEDAAGASWALRHAARTEGSTSA
RKHSIQTFGQHGHTCQGRGDPAAKLPADQMPLTQHGNHIADFHSKRDPDT
GASLRDTSHKNKHDSDEGKDSAIHGTTAVAHSTRDQFYRVPLAPHNNNPG
AENSGENSGGSGGAGHTGEGNPREQADASAGSSGGLGVAEVTTIIRALDR
LEGRFSSRLDRIEKMLWD back to topmRNA from alignment at H-paniculata_contig15825:141..5119+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_H-paniculata_contig15825.3385.1 ID=mRNA_H-paniculata_contig15825.3385.1|Name=mRNA_H-paniculata_contig15825.3385.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=4979bp|location=Sequence derived from alignment at H-paniculata_contig15825:141..5119+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
AACCGAGCCACGTTCCCGACGCCTGTGACCCAGAAACGAACATCCGGGTC
GTGGAGTGGATGCGGAAACTACCTCGCCGTAAGCAGCGGCGGCGAGATTC
GGGTCTACAGGCCGTGGCCCACCGGGCTCGCAGCAGTCAAAACTGGTTGT
GGGGCCGTCAATAGTAAAGCACAGGCGCGCAATGGGGGACTGGTAAGAGA
TGGGTGGATAGCACCAAGTGCCGATGAACACTCTATTGTTGTTCCCACCG
ATATCAGAGCGGTTCACGAGAATGAGCGCTTGGGAAAGAGAACAGACAGG
CCAAGTGCACGTGCGGTGGTAGACAGCAGCAGACATCGCTGTGGTGTTCC
CTCAACAAGTCACACGGACATGAACGTTACAGCGCAAGACGGTGAGGGAG
GAGGTAGCACATCTCCGTGCGTTTCAGGTACCGAGTTTCGCACCGTTCTT
TGCGTGGAAGCGTTAATGAAAGCGGTTTCAGGGGGTGCCAGTGGATCCTC
ATCCCCGATGTCGTCACCGAGCCCCCGGCGCTCGCCATCTCCAGAGCTGT
CACCGTCACGCATGCGTCGGTCGCTTGCACCCCTCCGTAAAGCCGAATCC
CTCAACGCAAAATCAATGAGCGTTGCAGAGGACCACGATCGCCTCCTATC
TTCTCTCCAAGTAGAAGAGGAGACCCCCGCTGTATTCGGGCTATGTTCTC
GCAAGAAAGGCGGCGGCGGTGGCGGTGGTGGCCTCTCCCTGCGGTCGAGA
TCATCGTCGTCTCGATCGCGGAGTTCTCCCGCCATCGGCGATATGCGCGC
CATGTGCCCTGGCGGCCCCAATGCGTTCTTCGGCACAACCGATGGCTGCC
TGGGATTAGGTTCTCTACTCGGCGGATTAGGACTGCCTTATTCGCCGGCG
GTGGACACCCAGAGCAGACGCTGCTTAAACGATAGTTTTTTTGGAAGCTC
AAACGCCAGGGGTGGCCACGGCGGGGGCGGGACGCTAGCGGGAGATACGC
TTTTAGCTTCCGGGGTCGTTGACAACAGCAACAAACGTGCTGAAGCAGAG
GAGGAACCGGCAGCCGCGTTGGGGATGGAGACTTCCGCTGTGAGCCGGAC
GGATTCTGTCACCGGATATATTTCGGGCGGGCTTCAACTCCCTGAACCGC
CACCGCCGCCGTTGACTGCCCGTCGACGTGGTGGGTTTCGAAATGTGCTT
CCTGGTCAGAACTGGCAGGCGGGGGTACTGCGTCCGACACGATCAAAGGG
CAAAGACCCGACTGCCGAGACGCCGCGGCGGACCAAGTCACAGCCACGGT
CTTCCGCGTTTTTAAGTGACCCCGGTGTGACCGCGGCTGCTAAGGTTTCT
GCTTTATCGTTAGGAGAAGCGGGGGCTGTTGCCCACGGCAGCAGCAGTAG
CAGCAGCAACGACAACAGGAGCAACAGCAATATCATCTTGGCAGATGCTA
GTGACAGTAGTAGCACTACCACGACCACCACCACCACCACCTTTGTAGAC
GCTGGTAGCTCGTCTCGCCTGTCGCGAACACCGTGGTCGCTCAGGGACGC
TTTAACCACTACGACAAACACCAATGGCGCTTCCGTATCATCGAAACCAC
GCGGCTCCTCGCTGCCACCGCAGAGGTCCCCTCGAAAGCATTCGACCGAG
TCGACGGTCATTCATGTCTCTCCTCCTTCGGGAAGTCCACCCTCCTCCGA
AGTTCTTGATTTGCGGGGAAAGTTGGGAGATGGCAGCATCGCTGTCCATG
CCGTGCACCCTCTTCTCAGGCTCCCGCTCGGCGGCGAGGGTGAGGGCGGG
GGTGGAGCTGCTATAACGAACGTGTCTTGTCGATCTCTTGCGCCTGTCGG
GGGCGACACGGGACCAGGGGTCATGGATGAAAAAGAGCATGGCTCGGTCG
GCAATGGGACCGGCAGAGGTCCACTGGGCGATCGAAAGGACAGCAGCCGA
CAACCCTGTCTCGTGCTCGTGACAACTGGCTTTCCTGACTCGGGTCAAAA
AGTTCCGGGGACGGGGGAAAGTGGTCGCGGTGCCGTTGACGTCAAGGCTG
TCGCAACCCTGCCGCCCGCCCTTTCATCTCCCGATCTTGTGGCGGCATCG
GAAGATGGGACGCTGGTTTGCGTCGGAAGTCACGCCTGCGAATTGGTGGC
GTGCTACCGCGTGGGGCTGCCGTCGGCGGACACATCGACTGTTATTGCGC
CACCCTCCGTATGGTATTCAGCTTCTTGTCCGTCAATGGCCCACCGTGCA
ACAGGAAATCCAGTGGCTACGTCAGCAGGGCGGTCAGATACGACTCTTCT
GGAGAAAGATGGTAAGAACGATAAGAAAATTTCTGATCATGCCGCATCTT
CAGAATCGCCATCCTCTCGGACCACCGGCCACGGTGGGGTGGCGGGGGAC
GGCGGGGACGAGGGAGGCACTGCAGGTGCCTTTGGCTTACACGGTGGCGC
CAATGCTGAGGCCTCGAGCGTGACAACAGGTAACCGCAGATCTAAAACTA
GAAGTAGGAAGAGAAGAGTGTGCCCAGCGAGAGCGATATGCACGCTCCGC
CTGCCGCAGGGACTCCGCGCCAAGGGACTGGTGTTCGCGAACGTCGGACC
GCAACCACAGGAGGAGCTACGACGGCGGCGACAGCGACGTGGACACGAAG
AAACAACTGATAGCACTGCTGCTGCTGCTGCTGCCAACCTTACGGCTGGT
GAGAAGGGAGAGAGCCCGGAAAGCGCGGGAAACAAATCCTCAGGGGGAGA
GGGTCTCCTGAGTCGACGAGGAATTATGGTGCTCGTTCTCGCAGCTGCTC
CCGTTGCTGCACCTTTCGCGACCCTTTCCAGGGGCGCGAGATCGTCTTTT
GGTTCGTCGATGAGGGCTGATCGCGCGAGCAGCAGCGCCAGGGCTAGCGG
TGGTTCTGTCGGTAGCGGCGGTAGCGGCGGTAGCGGCGGTGGCGGCTCGG
GGTCTTCTTCTCATGTCTCGTCTTATCGTACTGTCTTGCTGCGCTATTTG
CTGCCCGCGATGGCCGTGGATGATGCCCAGGGGGCCGGTGTTATTCCTCC
GCAAGATTTTTCCTCGGGTTTTCTGTCGCTGAAGGGAGATGAACCGCTTC
CGCCGTCCGAGGATGCAGCGGGGGCTTCATGGGCCTTGCGACACGCGGTG
AGCGAGCGGATTTGAAAACGGCATGTAATGCAATTCCAAATCAATATTGG
CACATTAGGATATACCCTAAGTCCATAACACCGATGTAAAGAGGTAAGTA
CGCTTGTGAACAGCATGGCAGCAGTGGAGGGCCGGTTTATCTTAGCGGCA
TGAAGAATTGCGAGTTTACTCTGGGTTGGGTTGTATCGATGCCGACCTTT
CGAAACTGTCGCAGATCTCTTTTTGCTTGTCTTCTGTTATGTCTGTAATA
GTAGTAGTGGCCTTACGGTCCTCTGGTAGTGGTGCTAAAAGTAGCTTGCA
CAAATTTTTACAATGATACTTGGGAGGCGTTAATAACCAATTCAAGGAAA
ACATTACGGACACTTGCGAATACGGACCACTTTCGGAAATAATGTTGCGA
TACTGTGATATAATACAGAGTGTGTTTTTTTTTTTAATAATTCTGTATCG
TGGGGCTACTAAACACTTTTGGGAATATTGTAGTACTTATTGGTAGGTGG
TTTCCTCCTATCTACGGTTTCCGGCTTTTCGGTCTTGGTCTTCCCCTGAT
GCCGCCCGAAGCCTCGACGAATGGCGTCGGTTTCTTGGGGAGATTTGGGC
GAGGAGAGATCAAACCAGATGTATGGTAGACGTGTTATGCCCCTGGTGTA
CAAGGAGATCCTTCATGCACTCTTTAGGTTGTTCAGAGGGGGTCATGAAG
ATGCACGGGCCTTGCGTGAGAGACTTGCGATGATCTCCATGTACTTCGTA
AACTCTCAAACGGGCGATATTAACGTTCCCATATTACGGAGGCACGTTGT
TAGTAGGACCAAATTGTTGCTTTACCGGAAAAGGAAAGTCCGAGCCTGTT
CGACCGAAACAAAATGCGGAATCGGTATGTGTAGGACCGTCTCAATCATG
CGGTGTGGACCCCCGTTTCGGTTTTCGATTCAACTCCATGATTGTGGAGA
TACTCAGACTTGAATGGGGGCACATCGGGTGAAAGAACAGCAATTTGGTC
CTTCTAACAATGTACCTCCAAAGGTAGTGTACAGTCTTCTAGTGCGGAAC
CTGTGCTTGCTTGACGTGACATAGAGGGATTTTTTCTTCTGAACGGTGCA
GTTTTCTGTTTCGTTGTGTCTATGTGAATTTATTGATGGTGTTGCTTGCT
TGTCTGCGACATGTACCATCAAGGTTTCTGAATGACGAGCAAAACAAGCA
ACCACAGATACACGTATTAATAGTGATCATAGCCTGAAAATTGCGCACGC
TCTACAATGCTGCTGTATTTCCCGGCGCTCTTGTCTCAACTACCCAGGCA
CGGACCGAAGGGTCAACCTCAGCTCGAAAGCATTCTATTCAGACGTTCGG
GCAACACGGCCACACTTGTCAGGGGCGCGGAGACCCTGCCGCTAAACTTC
CCGCCGATCAGATGCCGCTCACGCAGCACGGCAATCACATCGCAGATTTT
CATTCTAAACGCGACCCTGATACTGGTGCCTCTCTACGTGATACTTCGCA
CAAAAATAAACATGACAGCGACGAGGGCAAAGATTCTGCTATCCACGGTA
CCACCGCTGTCGCACATAGCACGCGGGACCAATTTTACCGTGTACCTTTA
GCTCCCCATAACAACAATCCAGGAGCAGAAAATTCTGGAGAAAATTCTGG
AGGAAGCGGGGGAGCTGGTCACACAGGAGAGGGAAATCCTAGAGAGCAGG
CGGATGCTTCTGCTGGGAGCAGTGGTGGTCTCGGCGTGGCAGAGGTCACG
ACGATCATCCGGGCTCTAGATCGCTTAGAGGGCCGATTTAGCTCCCGTTT
GGATAGAATAGAGAAGATGCTGTGGGACG back to topCoding sequence (CDS) from alignment at H-paniculata_contig15825:141..5119+ >mRNA_H-paniculata_contig15825.3385.1 ID=mRNA_H-paniculata_contig15825.3385.1|Name=mRNA_H-paniculata_contig15825.3385.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=6108bp|location=Sequence derived from alignment at H-paniculata_contig15825:141..5119+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
AACCGAGCCACGTTCCCGACGCCTGTGACCCAGAAACGAACATCCGGGTC
GTGGAGTGGATGCGGAAACTACCTCGCCGTAAGCAGCGGCGGCGAGATTC
GGGTCTACAGGCCGTGGCCCACCGGGCTCGCAGCAGTCAAAACTGGTTGT
GGGGCCGTCAATAGTAAAGCACAGGCGCGCAATGGGGGACTGGTAAGAGA
TGGGTGGATAGCACCAAAACCGAGCCACGTTCCCGACGCCTGTGACCCAG
AAACGAACATCCGGGTCGTGGAGTGGATGCGGAAACTACCTCGCCGTAAG
CAGCGGCGGCGAGATTCGGGTCTACAGGCCGTGGCCCACCGGGCTCGCAG
CAGTCAAAACTGGTTGTGGGGCCGTCAATAGTAAAGCACAGGCGCGCAAT
GGGGGACTGGTAAGAGATGGGTGGATAGCACCAAACAGGCCAAGTGCACG
TGCGGTGGTAGACAGCAGCAGACATCGCTGTGGTGTTCCCTCAACAAGTC
ACACGGACATGAACGTTACAGCGCAAGACGGTGAGGGAGGAGGTAGCACA
TCTCCGTGCGTTTCAGGTACCGAGTTTCGCACCGTTCTTTGCGTGGAAGC
GTTAATGAAAGCGGTTTCAGGGGGTGCCAGTGGATCCTCATCCCCGATGT
CGTCACCGAGCCCCCGGCGCTCGCCATCTCCAGAGCTGTCACCGTCACGC
ATGCGTCGGTCGCTTGCACCCCTCCGTAAAGCCGAATCCCTCAACGCAAA
ATCAATGAGCGTTGCAGAGGACCACGATCGCCTCCTATCTTCTCTCCAAG
TAGAAGAGGAGACCCCCGCTGTATTCGGGCTATGTTCTCGCAAGAAAGGC
GGCGGCGGTGGCGGTGGTGGCCTCTCCCTGCGGTCGAGATCATCGTCGTC
TCGATCGCGGAGTTCTCCCGCCATCGGCGATATGCGCGCCATGTGCCCTG
GCGGCCCCAATGCGTTCTTCGGCACAACCGATGGCTGCCTGGGATTAGGT
TCTCTACTCGGCGGATTAGGACTGCCTTATTCGCCGGCGGTGGACACCCA
GAGCAGACGCTGCTTAAACGATAGTTTTTTTGGAAGCTCAAACGCCAGGG
GTGGCCACGGCGGGGGCGGGACGCTAGCGGGAGATACGCTTTTAGCTTCC
GGGGTCGTTGACAACAGCAACAAACGTGCTGAAGCAGAGGAGGAACCGGC
AGCCGCGTTGGGGATGGAGACTTCCGCTGTGAGCCGGACGGATTCTGTCA
CCGGATATATTTCGGGCGGGCTTCAACTCCCTGAACCGCCACCGCCGCCG
TTGACTGCCCGTCGACGTGGTGGGTTTCGAAATGTGCTTCCTGGTCAGAA
CTGGCAGGCGGGGGTACTGCGTCCGACACGATCAAAGGGCAAAGACCCGA
CTGCCGAGACGCCGCGGCGGACCAAGTCACAGCCACGGTCTTCCGCGTTT
TTAAGTGACCCCGGTGTGACCGCGGCTGCTAAGGTTTCTGCTTTATCGTT
AGGAGAAGCGGGGGCTGTTGCCCACGGCAGCAGCAGTAGCAGCAGCAACG
ACAACAGGAGCAACAGCAATATCATCTTGGCAGATGCTAGTGACAGTAGT
AGCACTACCACGACCACCACCACCACCACCTTTGTAGACGCTGGTAGCTC
ACAGGCCAAGTGCACGTGCGGTGGTAGACAGCAGCAGACATCGCTGTGGT
GTTCCCTCAACAAGTCACACGGACATGAACGTTACAGCGCAAGACGGTGA
GGGAGGAGGTAGCACATCTCCGTGCGTTTCAGGTACCGAGTTTCGCACCG
TTCTTTGCGTGGAAGCGTTAATGAAAGCGGTTTCAGGGGGTGCCAGTGGA
TCCTCATCCCCGATGTCGTCACCGAGCCCCCGGCGCTCGCCATCTCCAGA
GCTGTCACCGTCACGCATGCGTCGGTCGCTTGCACCCCTCCGTAAAGCCG
AATCCCTCAACGCAAAATCAATGAGCGTTGCAGAGGACCACGATCGCCTC
CTATCTTCTCTCCAAGTAGAAGAGGAGACCCCCGCTGTATTCGGGCTATG
TTCTCGCAAGAAAGGCGGCGGCGGTGGCGGTGGTGGCCTCTCCCTGCGGT
CGAGATCATCGTCGTCTCGATCGCGGAGTTCTCCCGCCATCGGCGATATG
CGCGCCATGTGCCCTGGCGGCCCCAATGCGTTCTTCGGCACAACCGATGG
CTGCCTGGGATTAGGTTCTCTACTCGGCGGATTAGGACTGCCTTATTCGC
CGGCGGTGGACACCCAGAGCAGACGCTGCTTAAACGATAGTTTTTTTGGA
AGCTCAAACGCCAGGGGTGGCCACGGCGGGGGCGGGACGCTAGCGGGAGA
TACGCTTTTAGCTTCCGGGGTCGTTGACAACAGCAACAAACGTGCTGAAG
CAGAGGAGGAACCGGCAGCCGCGTTGGGGATGGAGACTTCCGCTGTGAGC
CGGACGGATTCTGTCACCGGATATATTTCGGGCGGGCTTCAACTCCCTGA
ACCGCCACCGCCGCCGTTGACTGCCCGTCGACGTGGTGGGTTTCGAAATG
TGCTTCCTGGTCAGAACTGGCAGGCGGGGGTACTGCGTCCGACACGATCA
AAGGGCAAAGACCCGACTGCCGAGACGCCGCGGCGGACCAAGTCACAGCC
ACGGTCTTCCGCGTTTTTAAGTGACCCCGGTGTGACCGCGGCTGCTAAGG
TTTCTGCTTTATCGTTAGGAGAAGCGGGGGCTGTTGCCCACGGCAGCAGC
AGTAGCAGCAGCAACGACAACAGGAGCAACAGCAATATCATCTTGGCAGA
TGCTAGTGACAGTAGTAGCACTACCACGACCACCACCACCACCACCTTTG
TAGACGCTGGTAGCTCTCCACCCTCCTCCGAAGTTCTTGATTTGCGGGGA
AAGTTGGGAGATGGCAGCATCGCTGTCCATGCCGTGCACCCTCTTCTCAG
GCTCCCGCTCGGCGGCGAGGGTGAGGGCGGGGGTGGAGCTGCTATAACGA
ACGTGTCTTGTCGATCTCTTGCGCCTGTCGGGGGCGACACGGGACCAGGG
GTCATGGATGAAAAAGAGCATGGCTCGGTCGGCAATGGGACCGGCAGAGG
TCCACTGGGCGATCGAAAGGACAGCAGCCGACAACCCTGTCTCGTGCTCG
TGACAACTGGCTTTCCTGACTCGGGTCAAAAAGTTCCGGGGACGGGGGAA
AGTGGTCGCGGTGCCGTTGACGTCAAGGCTGTCGCAACCCTGCCGCCCGC
CCTTTCATCTCCCGATCTTGTGGCGGCATCGGAAGATGGGACGCTGGTTT
GCGTCGGAAGTCACGCCTGCGAATTGGTGGCGTGCTACCGCGTGGGGCTG
CCGTCGGCGGACACATCGACTGTTATTGCGCCACCCTCCGTATGGTATTC
AGCTTCTTGTCCTCCACCCTCCTCCGAAGTTCTTGATTTGCGGGGAAAGT
TGGGAGATGGCAGCATCGCTGTCCATGCCGTGCACCCTCTTCTCAGGCTC
CCGCTCGGCGGCGAGGGTGAGGGCGGGGGTGGAGCTGCTATAACGAACGT
GTCTTGTCGATCTCTTGCGCCTGTCGGGGGCGACACGGGACCAGGGGTCA
TGGATGAAAAAGAGCATGGCTCGGTCGGCAATGGGACCGGCAGAGGTCCA
CTGGGCGATCGAAAGGACAGCAGCCGACAACCCTGTCTCGTGCTCGTGAC
AACTGGCTTTCCTGACTCGGGTCAAAAAGTTCCGGGGACGGGGGAAAGTG
GTCGCGGTGCCGTTGACGTCAAGGCTGTCGCAACCCTGCCGCCCGCCCTT
TCATCTCCCGATCTTGTGGCGGCATCGGAAGATGGGACGCTGGTTTGCGT
CGGAAGTCACGCCTGCGAATTGGTGGCGTGCTACCGCGTGGGGCTGCCGT
CGGCGGACACATCGACTGTTATTGCGCCACCCTCCGTATGGTATTCAGCT
TCTTGTCCATCTAAAACTAGAAGTAGGAAGAGAAGAGTGTGCCCAGCGAG
AGCGATATGCACGCTCCGCCTGCCGCAGGGACTCCGCGCCAAGGGACTGG
TGTTCGCGAACATCTAAAACTAGAAGTAGGAAGAGAAGAGTGTGCCCAGC
GAGAGCGATATGCACGCTCCGCCTGCCGCAGGGACTCCGCGCCAAGGGAC
TGGTGTTCGCGAACGGAGAGAGCCCGGAAAGCGCGGGAAACAAATCCTCA
GGGGGAGAGGGTCTCCTGAGTCGACGAGGAATTATGGTGCTCGTTCTCGC
AGCTGCTCCCGTTGCTGCACCTTTCGCGACCCTTTCCAGGGGCGCGAGAT
CGTCTTTTGGTTCGTCGATGAGGGCTGATCGCGCGAGCAGCAGCGCCAGG
GCTAGCGGTGGTTCTGTCGGTAGCGGCGGTAGCGGCGGTAGCGGCGGTGG
CGGCTCGGGGTCTTCTTCTCATGTCTCGTCTTATCGTACTGTCTTGCTGC
GCTATTTGCTGCCCGCGATGGCCGTGGATGATGCCCAGGGGGCCGGTGTT
ATTCCTCCGCAAGATTTTTCCTCGGGTTTTCTGTCGCTGAAGGGAGATGA
ACCGCTTCCGCCGTCCGAGGATGCAGCGGGGGCTTCATGGGCCTTGCGAC
ACGCGGGAGAGAGCCCGGAAAGCGCGGGAAACAAATCCTCAGGGGGAGAG
GGTCTCCTGAGTCGACGAGGAATTATGGTGCTCGTTCTCGCAGCTGCTCC
CGTTGCTGCACCTTTCGCGACCCTTTCCAGGGGCGCGAGATCGTCTTTTG
GTTCGTCGATGAGGGCTGATCGCGCGAGCAGCAGCGCCAGGGCTAGCGGT
GGTTCTGTCGGTAGCGGCGGTAGCGGCGGTAGCGGCGGTGGCGGCTCGGG
GTCTTCTTCTCATGTCTCGTCTTATCGTACTGTCTTGCTGCGCTATTTGC
TGCCCGCGATGGCCGTGGATGATGCCCAGGGGGCCGGTGTTATTCCTCCG
CAAGATTTTTCCTCGGGTTTTCTGTCGCTGAAGGGAGATGAACCGCTTCC
GCCGTCCGAGGATGCAGCGGGGGCTTCATGGGCCTTGCGACACGCGGCAC
GGACCGAAGGGTCAACCTCAGCTCGAAAGCATTCTATTCAGACGTTCGGG
CAACACGGCCACACTTGTCAGGGGCGCGGAGACCCTGCCGCTAAACTTCC
CGCCGATCAGATGCCGCTCACGCAGCACGGCAATCACATCGCAGATTTTC
ATTCTAAACGCGACCCTGATACTGGTGCCTCTCTACGTGATACTTCGCAC
AAAAATAAACATGACAGCGACGAGGGCAAAGATTCTGCTATCCACGGTAC
CACCGCTGTCGCACATAGCACGCGGGACCAATTTTACCGTGTACCTTTAG
CTCCCCATAACAACAATCCAGGAGCAGAAAATTCTGGAGAAAATTCTGGA
GGAAGCGGGGGAGCTGGTCACACAGGAGAGGGAAATCCTAGAGAGCAGGC
GGATGCTTCTGCTGGGAGCAGTGGTGGTCTCGGCGTGGCAGAGGTCACGA
CGATCATCCGGGCTCTAGATCGCTTAGAGGGCCGATTTAGCTCCCGTTTG
GATAGAATAGAGAAGATGCTGTGGGACGCACGGACCGAAGGGTCAACCTC
AGCTCGAAAGCATTCTATTCAGACGTTCGGGCAACACGGCCACACTTGTC
AGGGGCGCGGAGACCCTGCCGCTAAACTTCCCGCCGATCAGATGCCGCTC
ACGCAGCACGGCAATCACATCGCAGATTTTCATTCTAAACGCGACCCTGA
TACTGGTGCCTCTCTACGTGATACTTCGCACAAAAATAAACATGACAGCG
ACGAGGGCAAAGATTCTGCTATCCACGGTACCACCGCTGTCGCACATAGC
ACGCGGGACCAATTTTACCGTGTACCTTTAGCTCCCCATAACAACAATCC
AGGAGCAGAAAATTCTGGAGAAAATTCTGGAGGAAGCGGGGGAGCTGGTC
ACACAGGAGAGGGAAATCCTAGAGAGCAGGCGGATGCTTCTGCTGGGAGC
AGTGGTGGTCTCGGCGTGGCAGAGGTCACGACGATCATCCGGGCTCTAGA
TCGCTTAGAGGGCCGATTTAGCTCCCGTTTGGATAGAATAGAGAAGATGC
TGTGGGAC back to top
|