prot_H-paniculata_contig15824.3384.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig15824.3384.1
Unique Nameprot_H-paniculata_contig15824.3384.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length134
Homology
BLAST of mRNA_H-paniculata_contig15824.3384.1 vs. uniprot
Match: A0A6H5L4Y4_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4Y4_9PHAE)

HSP 1 Score: 133 bits (334), Expect = 5.120e-36
Identity = 61/131 (46.56%), Postives = 87/131 (66.41%), Query Frame = 0
Query:    2 RRTLAAGVVRQYRPKLEEVNLSERQYGVAVSGGAELMGLRAKAHHQLGHWLIALDCTDAFNSVKRAAIWEEVAIHTPGLTSFVAKCYGEKPADTIFQMDTGERSRISSNTGIHQGDGLGPALSYIPVGPIL 132
            RR +AAG VR+++PKLEE+     Q+GVAV+GG E + + A+  HQ GHW++  DC++AFN+ KR AI  + A   P L  ++A+CY E PA  I+ MD+GER  I   +G+ QGDG+GP L    + PI+
Sbjct:   89 RRLIAAGTVREWKPKLEEIFREADQFGVAVAGGVEQVAMDAQLVHQTGHWVVQTDCSNAFNTGKRTAIMAQAAKSVPDLVGYIARCYDEIPAKAIYTMDSGERRTIECKSGVQQGDGMGPPLFCFILVPIV 219          
BLAST of mRNA_H-paniculata_contig15824.3384.1 vs. uniprot
Match: A0A6H5KUZ8_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KUZ8_9PHAE)

HSP 1 Score: 135 bits (340), Expect = 2.210e-34
Identity = 62/131 (47.33%), Postives = 88/131 (67.18%), Query Frame = 0
Query:    2 RRTLAAGVVRQYRPKLEEVNLSERQYGVAVSGGAELMGLRAKAHHQLGHWLIALDCTDAFNSVKRAAIWEEVAIHTPGLTSFVAKCYGEKPADTIFQMDTGERSRISSNTGIHQGDGLGPALSYIPVGPIL 132
            RR +AAG VR+++PKLEE+     Q+GVAV+GG E + + A+  HQ GHW++  DC++AFN+ KR AI  + A   P L  ++A+CY E PA  I+ MD+GER  I   +G+ QGDG+GP LS   + PI+
Sbjct:   45 RRLIAAGTVREWKPKLEEIFREADQFGVAVAGGVEQVAMDAQLVHQTGHWVVQTDCSNAFNTGKRTAIMAQAAKSVPDLVGYIARCYDEIPAKAIYTMDSGERRTIECKSGVQQGDGMGPPLSCFILVPIV 175          
BLAST of mRNA_H-paniculata_contig15824.3384.1 vs. uniprot
Match: A0A6H5KDD0_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDD0_9PHAE)

HSP 1 Score: 132 bits (332), Expect = 5.150e-34
Identity = 60/131 (45.80%), Postives = 88/131 (67.18%), Query Frame = 0
Query:    2 RRTLAAGVVRQYRPKLEEVNLSERQYGVAVSGGAELMGLRAKAHHQLGHWLIALDCTDAFNSVKRAAIWEEVAIHTPGLTSFVAKCYGEKPADTIFQMDTGERSRISSNTGIHQGDGLGPALSYIPVGPIL 132
            RR +AAG VR+++PKLEE+     Q+GVAV+GG E + + A+  HQ GHW++  DC++AFN+ KR AI  + A   P L  ++A+CY E  A +I+ MD+GER  I   +G+ QGDG+GP L +  + PI+
Sbjct:   45 RRLIAAGTVREWKPKLEEIFREADQFGVAVAGGVEQVAMDAQLVHQTGHWVVQTDCSNAFNTGKRTAIMAKAAKSVPNLVGYIARCYDEISAKSIYAMDSGERRTIECKSGVQQGDGMGPPLFFFILFPIV 175          
BLAST of mRNA_H-paniculata_contig15824.3384.1 vs. uniprot
Match: A0A6H5LL14_9PHAE (Reverse transcriptase domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LL14_9PHAE)

HSP 1 Score: 134 bits (336), Expect = 7.280e-34
Identity = 61/131 (46.56%), Postives = 87/131 (66.41%), Query Frame = 0
Query:    2 RRTLAAGVVRQYRPKLEEVNLSERQYGVAVSGGAELMGLRAKAHHQLGHWLIALDCTDAFNSVKRAAIWEEVAIHTPGLTSFVAKCYGEKPADTIFQMDTGERSRISSNTGIHQGDGLGPALSYIPVGPIL 132
            RR +AAG VR+++PKLEE+     Q+GVAV+GG E + + A+  HQ GHW++  DC++AFN+ KR AI  + A   P L  ++A+CY E PA  I+ MD+GER  I   +G+ QGDG+GP L    + PI+
Sbjct:   88 RRLIAAGTVREWKPKLEEIFREADQFGVAVAGGVEQVAMDAQLVHQTGHWVVQTDCSNAFNTGKRTAIMAQAAKSVPDLVGYIARCYDEIPAKAIYTMDSGERRTIECKSGVQQGDGMGPPLFCFTLVPIV 218          
BLAST of mRNA_H-paniculata_contig15824.3384.1 vs. uniprot
Match: A0A6H5KAK8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAK8_9PHAE)

HSP 1 Score: 134 bits (336), Expect = 9.200e-34
Identity = 61/131 (46.56%), Postives = 88/131 (67.18%), Query Frame = 0
Query:    2 RRTLAAGVVRQYRPKLEEVNLSERQYGVAVSGGAELMGLRAKAHHQLGHWLIALDCTDAFNSVKRAAIWEEVAIHTPGLTSFVAKCYGEKPADTIFQMDTGERSRISSNTGIHQGDGLGPALSYIPVGPIL 132
            RR +AAG VR+++PKLEE+     Q+GVAV+GG E + + A+  HQ GHW++  DC++AFN+ KR AI  + A + P L  ++A+CY E PA  I+ MD+GER  I   +G+ QGDG+GP L    + PI+
Sbjct:  407 RRLIAAGTVREWKPKLEEIFREADQFGVAVAGGVEQVAMDAQLVHQTGHWVVQTDCSNAFNTGKRTAIMAQAAKNVPDLVGYIARCYDEIPAKAIYTMDSGERRTIECKSGVQQGDGMGPPLFCFILVPIV 537          
BLAST of mRNA_H-paniculata_contig15824.3384.1 vs. uniprot
Match: A0A6H5K0V7_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K0V7_9PHAE)

HSP 1 Score: 132 bits (331), Expect = 1.120e-33
Identity = 60/131 (45.80%), Postives = 86/131 (65.65%), Query Frame = 0
Query:    2 RRTLAAGVVRQYRPKLEEVNLSERQYGVAVSGGAELMGLRAKAHHQLGHWLIALDCTDAFNSVKRAAIWEEVAIHTPGLTSFVAKCYGEKPADTIFQMDTGERSRISSNTGIHQGDGLGPALSYIPVGPIL 132
            RR +AAG VR+++PKLEE+     Q+GVAV+GG E + + A+  HQ GHW++  DC+DAFN+ KR  I  + A   P +  ++A+CY E PA  I+ MD+GER  I   +G+ QGDG+GP L    + PI+
Sbjct:   81 RRLIAAGTVREWKPKLEEIFREADQFGVAVAGGVEQVAMDAQLVHQTGHWVVQTDCSDAFNTGKRTVIMAQAAKSVPDVLGYIARCYDEIPAKAIYTMDSGERRTIECKSGVQQGDGMGPPLFCFILVPIV 211          
BLAST of mRNA_H-paniculata_contig15824.3384.1 vs. uniprot
Match: A0A6H5JH58_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JH58_9PHAE)

HSP 1 Score: 133 bits (335), Expect = 1.430e-33
Identity = 60/131 (45.80%), Postives = 89/131 (67.94%), Query Frame = 0
Query:    2 RRTLAAGVVRQYRPKLEEVNLSERQYGVAVSGGAELMGLRAKAHHQLGHWLIALDCTDAFNSVKRAAIWEEVAIHTPGLTSFVAKCYGEKPADTIFQMDTGERSRISSNTGIHQGDGLGPALSYIPVGPIL 132
            RR +AAG VRQ++PKLEE+     Q+GVAV+GG E + + A+  HQ G+W+I  DC++AFN+ KR AI  + A   P L  ++A+CY E PA  +++MD+GER  +   +G+ QGDG+GP L  + + PI+
Sbjct:  627 RRLIAAGTVRQWKPKLEEMFREANQFGVAVAGGVERVAMEAQLVHQTGNWIIQTDCSNAFNTGKRTAIMAQAAKSLPDLVGYIARCYDEIPATAVYEMDSGERRTLECTSGVQQGDGMGPPLFSLILIPII 757          
BLAST of mRNA_H-paniculata_contig15824.3384.1 vs. uniprot
Match: A0A6H5JI32_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JI32_9PHAE)

HSP 1 Score: 133 bits (334), Expect = 1.840e-33
Identity = 61/131 (46.56%), Postives = 87/131 (66.41%), Query Frame = 0
Query:    2 RRTLAAGVVRQYRPKLEEVNLSERQYGVAVSGGAELMGLRAKAHHQLGHWLIALDCTDAFNSVKRAAIWEEVAIHTPGLTSFVAKCYGEKPADTIFQMDTGERSRISSNTGIHQGDGLGPALSYIPVGPIL 132
            RR +AAG VR+++PKLEE+     Q+GVAV+GG E + + A+  HQ GHW++  DC++AFN+ KR AI  + A   P L  ++A+CY E PA  I+ MD+GER  I   +G+ QGDG+GP L    + PI+
Sbjct:  478 RRLIAAGTVREWKPKLEEIFREADQFGVAVAGGVEQVAMDAQLVHQTGHWVVQTDCSNAFNTGKRTAIMAQAAKSVPDLVGYIARCYDEIPAKAIYTMDSGERRTIECKSGVQQGDGMGPPLFCFILVPIV 608          
BLAST of mRNA_H-paniculata_contig15824.3384.1 vs. uniprot
Match: A0A6H5KMQ2_9PHAE (Reverse transcriptase domain-containing protein n=16 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KMQ2_9PHAE)

HSP 1 Score: 133 bits (334), Expect = 1.890e-33
Identity = 61/131 (46.56%), Postives = 87/131 (66.41%), Query Frame = 0
Query:    2 RRTLAAGVVRQYRPKLEEVNLSERQYGVAVSGGAELMGLRAKAHHQLGHWLIALDCTDAFNSVKRAAIWEEVAIHTPGLTSFVAKCYGEKPADTIFQMDTGERSRISSNTGIHQGDGLGPALSYIPVGPIL 132
            RR +AAG VR+++PKLEE+     Q+GVAV+GG E + + A+  HQ GHW++  DC++AFN+ KR AI  + A   P L  ++A+CY E PA  I+ MD+GER  I   +G+ QGDG+GP L    + PI+
Sbjct:  457 RRLIAAGTVREWKPKLEEIFREADQFGVAVAGGVEQVAMDAQLVHQTGHWVVQTDCSNAFNTGKRTAIMAQAAKSVPDLVGYIARCYDEIPAKAIYAMDSGERRTIECKSGVQQGDGMGPPLFCFILVPIV 587          
BLAST of mRNA_H-paniculata_contig15824.3384.1 vs. uniprot
Match: A0A6H5KR59_9PHAE (Reverse transcriptase domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KR59_9PHAE)

HSP 1 Score: 130 bits (326), Expect = 2.590e-33
Identity = 60/131 (45.80%), Postives = 85/131 (64.89%), Query Frame = 0
Query:    2 RRTLAAGVVRQYRPKLEEVNLSERQYGVAVSGGAELMGLRAKAHHQLGHWLIALDCTDAFNSVKRAAIWEEVAIHTPGLTSFVAKCYGEKPADTIFQMDTGERSRISSNTGIHQGDGLGPALSYIPVGPIL 132
            RR +AAG VR+++PKLEE+     Q+GVAV+GG E + + A+  HQ GHW++  DC++AFN+ KR AI  + A   P L  ++A+CY E PA  I+ MD+G R  I    G+ QGDG+GP L    + PI+
Sbjct:  179 RRLIAAGTVREWKPKLEEIFREADQFGVAVAGGVEQVAMDAQLVHQTGHWVVQTDCSNAFNTGKRTAIMAQAAKSVPDLVGYIARCYDEIPAKAIYTMDSGARRTIECKGGVQQGDGMGPPLFCFILVPII 309          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig15824.3384.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L4Y4_9PHAE5.120e-3646.56Reverse transcriptase domain-containing protein n=... [more]
A0A6H5KUZ8_9PHAE2.210e-3447.33Reverse transcriptase domain-containing protein n=... [more]
A0A6H5KDD0_9PHAE5.150e-3445.80Reverse transcriptase domain-containing protein n=... [more]
A0A6H5LL14_9PHAE7.280e-3446.56Reverse transcriptase domain-containing protein (F... [more]
A0A6H5KAK8_9PHAE9.200e-3446.56Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K0V7_9PHAE1.120e-3345.80Reverse transcriptase domain-containing protein n=... [more]
A0A6H5JH58_9PHAE1.430e-3345.80Reverse transcriptase domain-containing protein n=... [more]
A0A6H5JI32_9PHAE1.840e-3346.56Reverse transcriptase domain-containing protein n=... [more]
A0A6H5KMQ2_9PHAE1.890e-3346.56Reverse transcriptase domain-containing protein n=... [more]
A0A6H5KR59_9PHAE2.590e-3345.80Reverse transcriptase domain-containing protein (F... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000477Reverse transcriptase domainPFAMPF00078RVT_1coord: 20..131
e-value: 2.5E-7
score: 30.5

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig15824contigH-paniculata_contig15824:5220..5621 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig15824.3384.1mRNA_H-paniculata_contig15824.3384.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig15824 3835..6116 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig15824.3384.1 ID=prot_H-paniculata_contig15824.3384.1|Name=mRNA_H-paniculata_contig15824.3384.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=134bp
MRRTLAAGVVRQYRPKLEEVNLSERQYGVAVSGGAELMGLRAKAHHQLGH
WLIALDCTDAFNSVKRAAIWEEVAIHTPGLTSFVAKCYGEKPADTIFQMD
TGERSRISSNTGIHQGDGLGPALSYIPVGPILR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000477RT_dom