prot_H-paniculata_contig1582.3380.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig1582.3380.1
Unique Nameprot_H-paniculata_contig1582.3380.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length371
Homology
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BLAST of mRNA_H-paniculata_contig1582.3380.1 vs. uniprot
Match: D8LK41_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LK41_ECTSI)

HSP 1 Score: 424 bits (1089), Expect = 1.360e-144
Identity = 240/387 (62.02%), Postives = 274/387 (70.80%), Query Frame = 0 
Query:    4 NVDVMGLVLYSLFLLLVCWRVRPFLVGHESLSSTDCIKLGFHICLLGSALLELVHYAVALAKRGSVLSGYACHLVALWLSLVAFSLVIVLWSNTLTPPRRAAARPAVSGVSSTLG-----------KCCS-FRLSGTTKFVGAIDAIVAITTIVVLLTGAVPAYSRPYLILVVAHSVTLFLLASWLVLYGVRLQRRVMGHPRWEPLDRRQRLKILCRINGVLVVCAICFLIRVGVLSSALFVRSRHRAEEMNRLLFELLSKWISGLVPGVALLHIMCKTKRPGEDKNA-QHMRMNAVSDDQPLRQPLLASRGVGSLSPSVVDRQEQGFAGSKSHTGDGGNSRGGSSPLNSERAGLGEGGEQ-------DSFVYHVVRSQRERTETTI 370
            + DV G+VLY+LF  LVC R RPFL    SLSSTD IKL FH+C+  SALLE+VHYA+ LA RGSVLSGYACHLV LWLSLV+FSLVIVLWSNTL PP                            +CC   R+S   KFV AIDAIVA+ T+VVL TG+VPAYSRPYLIL+V HSVTLFLLASWLVLYG+RLQRRVMGHPRWEPLDRRQRLKILCRINGVLVVCA CFL+RV VLSSALFVRSRHRAE+MNRLLFE+L++W+SGL+PGVALLHIMCKTK+PGED+     MR++ V++DQPL +PLL +   G    S+  ++  G AG     G   NSR G                        DSF Y +VRSQRERTETTI
Sbjct:    6 SADVCGIVLYTLFFGLVCIRTRPFLTDRRSLSSTDRIKLAFHVCINTSALLEIVHYAIELAFRGSVLSGYACHLVGLWLSLVSFSLVIVLWSNTLHPPXXXXXXXXXXXXXXXXXXXXXXXEPAGWRCCGKTRISIAAKFVCAIDAIVALATVVVLWTGSVPAYSRPYLILMVTHSVTLFLLASWLVLYGIRLQRRVMGHPRWEPLDRRQRLKILCRINGVLVVCAACFLVRVAVLSSALFVRSRHRAEDMNRLLFEVLARWVSGLIPGVALLHIMCKTKKPGEDRPPPDQMRLSVVNEDQPLNEPLLPTHHGGGGYVSMAKKKPNGSAG----RGTSSNSRSGXXXXXXXXXXXXXXXXXXXXXXXXDSFAYQIVRSQRERTETTI 388
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig1582.3380.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LK41_ECTSI1.360e-14462.02Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR009457Domain of unknown function DUF1084PFAMPF06454DUF1084coord: 137..281
e-value: 6.4E-6
score: 25.7
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 209..233
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 183..208
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 95..130
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 10..21
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 245..267
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 131..152
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 159..182
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 234..244
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 22..26
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 62..72
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 73..94
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..26
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 27..41
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 268..370
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 42..61
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 153..158
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..9
NoneNo IPR availableTMHMMTMhelixcoord: 42..64
NoneNo IPR availableTMHMMTMhelixcoord: 74..96
NoneNo IPR availableTMHMMTMhelixcoord: 131..153
NoneNo IPR availableTMHMMTMhelixcoord: 10..29
NoneNo IPR availableTMHMMTMhelixcoord: 158..180
NoneNo IPR availableTMHMMTMhelixcoord: 246..268
NoneNo IPR availableTMHMMTMhelixcoord: 209..231

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig1582contigH-paniculata_contig1582:18295..23318 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig1582.3380.1mRNA_H-paniculata_contig1582.3380.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig1582 17530..23715 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig1582.3380.1 ID=prot_H-paniculata_contig1582.3380.1|Name=mRNA_H-paniculata_contig1582.3380.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=371bp
MWDNVDVMGLVLYSLFLLLVCWRVRPFLVGHESLSSTDCIKLGFHICLLG
SALLELVHYAVALAKRGSVLSGYACHLVALWLSLVAFSLVIVLWSNTLTP
PRRAAARPAVSGVSSTLGKCCSFRLSGTTKFVGAIDAIVAITTIVVLLTG
AVPAYSRPYLILVVAHSVTLFLLASWLVLYGVRLQRRVMGHPRWEPLDRR
QRLKILCRINGVLVVCAICFLIRVGVLSSALFVRSRHRAEEMNRLLFELL
SKWISGLVPGVALLHIMCKTKRPGEDKNAQHMRMNAVSDDQPLRQPLLAS
RGVGSLSPSVVDRQEQGFAGSKSHTGDGGNSRGGSSPLNSERAGLGEGGE
QDSFVYHVVRSQRERTETTI*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR009457DUF1084