mRNA_H-paniculata_contig15814.3379.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig15814.3379.1 vs. uniprot
Match: A0A6H5JDS2_9PHAE (PAPS_reduct domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JDS2_9PHAE) HSP 1 Score: 192 bits (489), Expect = 2.330e-51 Identity = 123/253 (48.62%), Postives = 151/253 (59.68%), Query Frame = 1
Query: 238 QAVIMGQRRGDPWTENMEHFTQSTPGWPEFTRVNPALEWKFHHVWRFLRAAHLSYCCLYDQGYTSLGERGDTQKNEALRLPNGQYRPAYTLAEE--HLERSPRSPQPKVRGDSSPGDLDSAKSVHDRGARHLG-RGHSSWDEKWDSWTRDEQGAALDAAEESSNRAGATANSAIVVAA-----------------PEAGGACVVSGRGQEKGGSWAAVGWMGGSARWLPLTALVLAILAS-IGFRRSGVPLKG 933
+AVIMGQRRGDPWTE+ME FT STPGW EFTRVNPALEWKF HVWR LR + L YC LYDQGYTSLGERGDT KNEALRLP+G YRPAY LAEE +LERSPR+P P SP + + D G G + SSWDE+WDS G A D +++ G A V++ P GAC+ ++ G + VGW+G LP+T + LA++A+ +G R + +G
Sbjct: 160 KAVIMGQRRGDPWTEDMEWFTASTPGWAEFTRVNPALEWKFCHVWRLLRGSGLPYCVLYDQGYTSLGERGDTSKNEALRLPDGSYRPAYELAEEEEYLERSPRTPTPG--SPRSPSRVSPPRERDDGGGGDEGNKRFSSWDEEWDS----SAGTAQDRPAVAADDGGQDILDAETVSSGXXXXXXXXXXXXGRTGPSGNGACLPPP--VKERGEGSLVGWVGSL---LPVTTIALALVAAAVGVRSTSGSSRG 401
BLAST of mRNA_H-paniculata_contig15814.3379.1 vs. uniprot
Match: A0A835YNH1_9STRA (FAD synthetase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YNH1_9STRA) HSP 1 Score: 142 bits (358), Expect = 3.710e-34 Identity = 66/103 (64.08%), Postives = 76/103 (73.79%), Query Frame = 1
Query: 238 QAVIMGQRRGDPWTENMEHFTQSTPGWPEFTRVNPALEWKFHHVWRFLRAAHLSYCCLYDQGYTSLGERGDTQKNEALRLPNGQYRPAYTLAEEHLERSPRSP 546
+AV+MGQR GDPWT+ M+ FT STPGWPEF R+NP L W + +VWRFLR L YC LYD+GYTSLGE T KN ALR P+G Y PAY L + LERS RSP
Sbjct: 110 KAVLMGQRYGDPWTDGMDDFTPSTPGWPEFVRLNPILRWPYDYVWRFLRRCRLPYCHLYDEGYTSLGEAVLTIKNPALRRPDGTYIPAYELHDPALERSNRSP 212
BLAST of mRNA_H-paniculata_contig15814.3379.1 vs. uniprot
Match: A0A7S2QJR4_9DINO (Hypothetical protein (Fragment) n=1 Tax=Brandtodinium nutricula TaxID=1333877 RepID=A0A7S2QJR4_9DINO) HSP 1 Score: 127 bits (320), Expect = 4.950e-30 Identity = 55/100 (55.00%), Postives = 70/100 (70.00%), Query Frame = 1
Query: 241 AVIMGQRRGDPWTENMEHFTQSTPGWPEFTRVNPALEWKFHHVWRFLRAAHLSYCCLYDQGYTSLGERGDTQKNEALRLPNGQYRPAYTLAEEHLERSPR 540
AV+MGQRRGDPW + ++ F+ S+ GWP F RVNP ++W + HVW FLRA L YC +YD GYTS+G GDT N ALR P+G + PAY L + ER+ R
Sbjct: 83 AVVMGQRRGDPWMDKVDMFSPSSDGWPAFMRVNPIIDWAYSHVWLFLRAFGLPYCAMYDAGYTSIGSVGDTAPNPALRRPDGSFAPAYELRDASSERAGR 182
BLAST of mRNA_H-paniculata_contig15814.3379.1 vs. uniprot
Match: S4RHL1_PETMA (PAPS_reduct domain-containing protein n=2 Tax=Petromyzon marinus TaxID=7757 RepID=S4RHL1_PETMA) HSP 1 Score: 120 bits (302), Expect = 1.460e-27 Identity = 54/106 (50.94%), Postives = 74/106 (69.81%), Query Frame = 1
Query: 238 QAVIMGQRRGDPWTENMEHFTQSTPGWPEFTRVNPALEWKFHHVWRFLRAAHLSYCCLYDQGYTSLGERGDTQKNEALRLPNGQ----YRPAYTLAEEHLERSPRS 543
+AV+MG RR DP++ + ++ PGWPE+ R+NP LEW +H VWRFLR+++L YC LYD GYTSLG DT +N+ALR + + YRPAY+L + ER+ RS
Sbjct: 108 RAVLMGTRRTDPYSHTLTPECRTDPGWPEYVRINPMLEWSYHDVWRFLRSSNLPYCILYDNGYTSLGSAADTWRNDALRYTDARGEEHYRPAYSLDDPEEERASRS 213
BLAST of mRNA_H-paniculata_contig15814.3379.1 vs. uniprot
Match: E1ZTG9_CHLVA (MoCF_biosynth domain-containing protein n=1 Tax=Chlorella variabilis TaxID=554065 RepID=E1ZTG9_CHLVA) HSP 1 Score: 125 bits (313), Expect = 1.630e-27 Identity = 56/104 (53.85%), Postives = 69/104 (66.35%), Query Frame = 1
Query: 229 TRNQAVIMGQRRGDPWTENMEHFTQSTPGWPEFTRVNPALEWKFHHVWRFLRAAHLSYCCLYDQGYTSLGERGDTQKNEALRLPNGQYRPAYTLAEEHLERSPR 540
T Q +I+G RRGDP + E F S+ GWP F R+NP L+W +H VW FL AH+ YCCLYDQGYTSLG +T N ALRL +G Y PA+ L + LER+ R
Sbjct: 132 THIQGIILGTRRGDPNAADQETFCPSSVGWPPFMRINPILDWSYHDVWGFLNLAHVPYCCLYDQGYTSLGAVSNTVPNSALRLEDGSYAPAHMLPDARLERAGR 235
BLAST of mRNA_H-paniculata_contig15814.3379.1 vs. uniprot
Match: A0A485K755_9STRA (Aste57867_2257 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485K755_9STRA) HSP 1 Score: 120 bits (301), Expect = 4.860e-27 Identity = 63/141 (44.68%), Postives = 83/141 (58.87%), Query Frame = 1
Query: 142 ISACVRRFKYF--LTTCFSVKNKYVFSLRGSTRNQAVIMGQRRGDPWTENMEHFTQSTPGWPEFTRVNPALEWKFHHVWRFLRAAHLSYCCLYDQGYTSLGERGDTQKNEALRLPNG-----QYRPAYTLAEEHLERSPRS 543
I AC+ R+ + + TC V+ + + R QA +MG R GDP T+ +EHF+ S+PGWP F RVNP L W++ HVW FLR +L YC LYDQGYTSLG +T +N L N +Y PA+ L + ER RS
Sbjct: 107 IHACIDRYGFACEMQTCHFVQG--IEKIIAKRRTQAFLMGVRVGDPGTDELEHFSPSSPGWPAFFRVNPILRWRYDHVWLFLRHLNLEYCSLYDQGYTSLGSVHNTVRNPDLEYVNDDTGKTEYWPAHKLVDNASERCGRS 245
BLAST of mRNA_H-paniculata_contig15814.3379.1 vs. uniprot
Match: W4FHS3_9STRA (Uncharacterized protein n=7 Tax=Aphanomyces astaci TaxID=112090 RepID=W4FHS3_9STRA) HSP 1 Score: 116 bits (290), Expect = 1.430e-25 Identity = 56/114 (49.12%), Postives = 73/114 (64.04%), Query Frame = 1
Query: 214 SLRGSTRNQAVIMGQRRGDPWTENMEHFTQSTPGWPEFTRVNPALEWKFHHVWRFLRAAHLSYCCLYDQGYTSLGERGDTQKNEALRLPNG----QYRPAYTLAEEHLERSPRS 543
S+ + QA +MG RRGDP TE++EHF+ S+ GWP F RVNP L+W++ +VW FLR L YC LYDQGYTSLG +T++N L N +Y PAY L + ER R+
Sbjct: 131 SIISKRKTQAFVMGVRRGDPGTEDLEHFSPSSTGWPAFFRVNPILQWRYDYVWLFLRKLKLEYCMLYDQGYTSLGSVHNTERNPELVHINDSGDTEYWPAYKLLDNESERCGRA 244
BLAST of mRNA_H-paniculata_contig15814.3379.1 vs. uniprot
Match: UPI0014040879 (FAD synthase isoform X1 n=2 Tax=Amblyraja radiata TaxID=386614 RepID=UPI0014040879) HSP 1 Score: 112 bits (281), Expect = 1.480e-25 Identity = 56/135 (41.48%), Postives = 75/135 (55.56%), Query Frame = 1
Query: 151 CVRRFKYFLTTCFSVKNKYVFSLRGSTRNQAVIMGQRRGDPWTENMEHFTQSTPGWPEFTRVNPALEWKFHHVWRFLRAAHLSYCCLYDQGYTSLGERGDTQKNEALR----LPNGQYRPAYTLAEEHLERSPRS 543
C R T C ++K +AV+MG RR DP++ + + PGWP++ RVNP L+W +H +W FLR ++ YC LYD+GYTSLG +T KN LR L +Y PAY L EE ERS R+
Sbjct: 9 CKRYNLQLYTVCGTIKEALTDLKEQQPGIKAVLMGTRRTDPYSRTLNPMCSTDPGWPDYMRVNPLLDWSYHDIWEFLRTLYIPYCVLYDRGYTSLGSMENTTKNPTLRYVTDLGVERYWPAYHLQEEAEERSSRT 143
BLAST of mRNA_H-paniculata_contig15814.3379.1 vs. uniprot
Match: A0A0D2LPZ7_9CHLO (MoCF_biosynth domain-containing protein n=1 Tax=Monoraphidium neglectum TaxID=145388 RepID=A0A0D2LPZ7_9CHLO) HSP 1 Score: 117 bits (292), Expect = 1.510e-25 Identity = 52/101 (51.49%), Postives = 70/101 (69.31%), Query Frame = 1
Query: 241 AVIMGQRRGDPWTENMEHFTQSTPGWPEFTRVNPALEWKFHHVWRFLRAAHLSYCCLYDQGYTSLGERGDTQKNEALRLPNGQYRPAYTLAEEHLERSPRS 543
A+++G RRGDP E E+F S+ GWP F R+NP L+W +H VW FLRAA + YC LY++GYTSLG +T N AL+ +G + PA+ LA+ LERS R+
Sbjct: 43 AIVLGTRRGDPNAEGQEYFCPSSEGWPPFMRINPVLDWTYHDVWTFLRAAKVPYCDLYNRGYTSLGGVHNTLPNSALKKADGSFAPAHMLADGRLERSGRA 143
BLAST of mRNA_H-paniculata_contig15814.3379.1 vs. uniprot
Match: A0A418AIE8_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A418AIE8_9STRA) HSP 1 Score: 114 bits (286), Expect = 1.820e-25 Identity = 56/114 (49.12%), Postives = 73/114 (64.04%), Query Frame = 1
Query: 214 SLRGSTRNQAVIMGQRRGDPWTENMEHFTQSTPGWPEFTRVNPALEWKFHHVWRFLRAAHLSYCCLYDQGYTSLGERGDTQKNEALRLPNG----QYRPAYTLAEEHLERSPRS 543
S+ + QA +MG RRGDP T+++EHF+ S+ GWP F RVNP L+W++ +VW FLR+ L YC LYDQGYTSLG +T +N L N +Y PAY L + ER RS
Sbjct: 91 SIISKRKTQAFVMGVRRGDPGTDDLEHFSPSSTGWPAFFRVNPILQWRYDYVWLFLRSLKLEYCALYDQGYTSLGSVHNTVRNPQLVHINENGDTEYWPAYRLLDNTSERCGRS 204 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig15814.3379.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig15814.3379.1 >prot_H-paniculata_contig15814.3379.1 ID=prot_H-paniculata_contig15814.3379.1|Name=mRNA_H-paniculata_contig15814.3379.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=230bp MGQRRGDPWTENMEHFTQSTPGWPEFTRVNPALEWKFHHVWRFLRAAHLSback to top mRNA from alignment at H-paniculata_contig15814:2..1964+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig15814.3379.1 ID=mRNA_H-paniculata_contig15814.3379.1|Name=mRNA_H-paniculata_contig15814.3379.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=1963bp|location=Sequence derived from alignment at H-paniculata_contig15814:2..1964+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig15814:2..1964+ >mRNA_H-paniculata_contig15814.3379.1 ID=mRNA_H-paniculata_contig15814.3379.1|Name=mRNA_H-paniculata_contig15814.3379.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1380bp|location=Sequence derived from alignment at H-paniculata_contig15814:2..1964+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |