prot_H-paniculata_contig15807.3374.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig15807.3374.1
Unique Nameprot_H-paniculata_contig15807.3374.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length252
Homology
BLAST of mRNA_H-paniculata_contig15807.3374.1 vs. uniprot
Match: A0A060SQ02_PYCCI (Integrase catalytic domain-containing protein n=4 Tax=Pycnoporus cinnabarinus TaxID=5643 RepID=A0A060SQ02_PYCCI)

HSP 1 Score: 77.0 bits (188), Expect = 2.240e-12
Identity = 78/258 (30.23%), Postives = 119/258 (46.12%), Query Frame = 0
Query:    3 WNSDTGATDHMTSHETAFEDYTP-ALPGTMCEIANETFVPVEGWRRLVLLVSQPRGKSRVAV-LNRVPHVPELGRNLISTRGATDISGKSF-ICSANKASLGLGEEESLISNGSASSGPYEVEAVRSAAGTAKALTARKSSNRDVTDMHRLLVHASEQITRDTVE---TAGLVLTGEWRA---CKGCSPAKAHRFAVPKKTDKRATRAAERLYVDLGGPMRVTSLGGSSYVMLTVDDYSRFQAVKFIKKKSDATAALQ 251
            WN+DTGA+ HMT H   F  Y+P  +P     +AN   V   G   +V   ++  G    AV L+ V HVP L  NL+S    T   G +  +C +       G+   L    S +         R+ +    AL+A  +   D +  H+   H +    R  V+    +GLVL  + +    C+ C   K +R ++P+   ++ T  A  ++ DL GP+ V +  G  Y M  V D +RF  V ++K+KSDA AA Q
Sbjct:  289 WNTDTGASAHMTPHRHWFRSYSPHVIP---IRLANSHIVYSAGLGSVVFQPAEREGVVPPAVVLHDVLHVPALASNLLSVFHLTREKGYTVELCGSRVLFYHQGQ---LRFEASVNEHNVGYLLGRTVSQAKHALSASSTCEEDESLWHQRCSHINLDDLRSVVKKGLVSGLVLRSKRKPDPICEPCLAGKLNRHSIPRFASRKHTPIA-LVHTDLKGPLPVPTPEGHIYWMTFVCDATRFWVVAYLKRKSDAFAAFQ 539          
BLAST of mRNA_H-paniculata_contig15807.3374.1 vs. uniprot
Match: A0A060SIJ8_PYCCI (Integrase catalytic domain-containing protein n=2 Tax=Trametes TaxID=5324 RepID=A0A060SIJ8_PYCCI)

HSP 1 Score: 77.0 bits (188), Expect = 2.340e-12
Identity = 78/258 (30.23%), Postives = 119/258 (46.12%), Query Frame = 0
Query:    3 WNSDTGATDHMTSHETAFEDYTP-ALPGTMCEIANETFVPVEGWRRLVLLVSQPRGKSRVAV-LNRVPHVPELGRNLISTRGATDISGKSF-ICSANKASLGLGEEESLISNGSASSGPYEVEAVRSAAGTAKALTARKSSNRDVTDMHRLLVHASEQITRDTVE---TAGLVLTGEWRA---CKGCSPAKAHRFAVPKKTDKRATRAAERLYVDLGGPMRVTSLGGSSYVMLTVDDYSRFQAVKFIKKKSDATAALQ 251
            WN+DTGA+ HMT H   F  Y+P  +P     +AN   V   G   +V   ++  G    AV L+ V HVP L  NL+S    T   G +  +C +       G+   L    S +         R+ +    AL+A  +   D +  H+   H +    R  V+    +GLVL  + +    C+ C   K +R ++P+   ++ T  A  ++ DL GP+ V +  G  Y M  V D +RF  V ++K+KSDA AA Q
Sbjct:  211 WNTDTGASAHMTPHRHWFRSYSPHVIP---IRLANSHIVYSAGLGSVVFQPAEREGVVPPAVVLHDVLHVPALASNLLSVFHLTREKGYTVELCGSRVLFYHQGQ---LRFEASVNEHNVGYLLGRTVSQAKHALSASSTCEEDESLWHQRCSHINLDDLRSVVKKGLVSGLVLRSKRKPDPICEPCLAGKLNRHSIPRFASRKHTPIA-LVHTDLKGPLPVPTPEGHIYWMTFVCDATRFWVVAYLKRKSDAFAAFQ 461          
BLAST of mRNA_H-paniculata_contig15807.3374.1 vs. uniprot
Match: A0A6H5KU45_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KU45_9PHAE)

HSP 1 Score: 75.1 bits (183), Expect = 1.100e-11
Identity = 41/112 (36.61%), Postives = 65/112 (58.04%), Query Frame = 0
Query:  136 ARKSSNRDVTDMHRLLVHASEQITRDTVETAGLVLTG-EWRACKGCSPAKAHRFAVPKKTDKRATRAAERLYVDLGGPMRVTSLGGSSYVMLTVDDYSRFQAVKFIKKKSDA 246
            A+ ++  D+ D     +HA E++ RDT +  G+ LTG     C  CS +K     V   T  RA +   R+++DLGG M++ S+GGS + +  V D++R+  V F+K+KSDA
Sbjct: 1245 AKAATPTDINDCRNSHLHAHEKLLRDTAKQQGVQLTGGPLLPCLSCSISKGQVKPVGTSTSTRAVKKLVRIFLDLGGKMKIASIGGSLFTLKIVCDHTRWTRVFFLKRKSDA 1356          
BLAST of mRNA_H-paniculata_contig15807.3374.1 vs. uniprot
Match: A0A6H5J7L5_9PHAE (Integrase catalytic domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J7L5_9PHAE)

HSP 1 Score: 69.7 bits (169), Expect = 1.910e-10
Identity = 40/106 (37.74%), Postives = 61/106 (57.55%), Query Frame = 0
Query:  143 DVTDMHRLLVHASEQITRDTVETAGLVLTGEWRACKGCSPAKAHRFAVPKKTDKRATRAAERLYVDLGGPMRVTSLGGSSYVMLTVDDYSRFQAVKFIKKKSDATA 248
            DV  +H    HA+E + R+  +  GL LTG  + C GC  AK  +  VP +   RA R  +  ++DL GPM   SLGGS ++++ VD +SR+  +  +++KSD  A
Sbjct:   37 DVNLLHVSSSHANEFLLRELAKQHGLRLTGVLQPCGGCLQAKGKKAGVPHQLGTRAERPHDLWHIDLCGPM-TASLGGSFFMIMFVDSFSRWMKLYGMRRKSDTLA 141          
BLAST of mRNA_H-paniculata_contig15807.3374.1 vs. uniprot
Match: A0A6H5JA10_9PHAE (Integrase catalytic domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JA10_9PHAE)

HSP 1 Score: 68.2 bits (165), Expect = 2.630e-10
Identity = 38/106 (35.85%), Postives = 61/106 (57.55%), Query Frame = 0
Query:  143 DVTDMHRLLVHASEQITRDTVETAGLVLTGEWRACKGCSPAKAHRFAVPKKTDKRATRAAERLYVDLGGPMRVTSLGGSSYVMLTVDDYSRFQAVKFIKKKSDATA 248
            DV  +H    HA+E + R+  +  GL LTG  ++C GC   K  +  VP +   RA R  +  ++D+ GPM   SLGGS ++++ VD +SR+  +  +++KSD  A
Sbjct:   18 DVNLLHVSSSHANEFLLRELAKQHGLRLTGVLQSCGGCLQGKGKKAGVPHQLGTRAERPHDLWHIDMCGPM-TASLGGSFFMIMFVDSFSRWMKLYGMRRKSDTLA 122          
BLAST of mRNA_H-paniculata_contig15807.3374.1 vs. uniprot
Match: A0A146H2N5_MYCCL (Integrase catalytic domain-containing protein n=1 Tax=Mycena chlorophos TaxID=658473 RepID=A0A146H2N5_MYCCL)

HSP 1 Score: 70.9 bits (172), Expect = 2.850e-10
Identity = 79/263 (30.04%), Postives = 108/263 (41.06%), Query Frame = 0
Query:    3 WNSDTGATDHMTSHETAFEDYTP-ALPGTMCEIANETFVPVEGWRRLVLLVSQPRGKSRVAVLNRVPHVPELGRNLISTRGATDISGKSFICSANKASLGLGEE------ESLISNGSASSGPYEVEAVRSAAGTAKALTARKSSNRDVTDMHRLLVHASEQI-----TRDTVETAGLVLTGEWRA---CKGCSPAKAHRFAVPKKTDKRATRAAERLYVDLGGPMRVTSLGGSSYVMLTVDDYSRFQAVKFIKKKSDATAAL 250
            WN+DTGAT HMT H   F  Y P  +P     +A+   V   G   +           ++    RV HVP+L  NL+S    T    K FI +  +  L    +       S+  + +A    Y V AV      A  L    S        HR L H          +RD V   G+ +T        C+ C   K HR  +PK  + RAT+  E ++VDL GP+ V S  G  Y    +DDY R      +KKKS+   A+
Sbjct:  305 WNTDTGATSHMTPHRRWFATYEPHRVP---IRLADNKIVYSAGVGSVRFQPLVDGALEQMVEFERVLHVPDLRSNLLSVLYLT--RQKRFIVTIARDLLTFRRDGKTLFTASINEHNTAYLDGYTVPAVEQHVHAATTLPLTVSL------WHRRLGHIGMDYVKMLKSRDLV--LGMQITSSQPPDPICEPCLAGKQHRGPIPKHAEFRATQPLELVHVDLKGPLPVRSREGYQYWTTFIDDYRRVWVTFKLKKKSEFFKAM 554          
BLAST of mRNA_H-paniculata_contig15807.3374.1 vs. uniprot
Match: A0A699J248_TANCI (Retrovirus-related Pol polyprotein from transposon TNT 1-94 (Fragment) n=1 Tax=Tanacetum cinerariifolium TaxID=118510 RepID=A0A699J248_TANCI)

HSP 1 Score: 70.5 bits (171), Expect = 3.140e-10
Identity = 66/252 (26.19%), Postives = 106/252 (42.06%), Query Frame = 0
Query:    3 WNSDTGATDHMTSHETAFEDYTPALPGTMCEIANETFVPVEGWRRLVLLVSQPRGKSRVAVLNRVPHVPELGRNLISTRGATDISGKSFICSANKASLGLGEEESL-ISNGSASSGPYEVEAVRSAAGTAKALTARKSSNRDVTDMHRL----LVHASEQITRDTVETAGLVLTGEWRACKGCSPAKAHRFAVPKKTDKRATRAAERLYVDLGGPMRVTSLGGSSYVMLTVDDYSRFQAVKFIKKKSDATAA 249
            W  D G + HMT +      +     GT+C   N  F  + G+  +V+             + +V +V  L  NL S     D   K    +  K+S  +  E+ + +  G  SS  Y +     A+ ++  L A+ SS++      RL        +  +  + ++    +   +   C  C   K HR     KTD    +    LY+DL GPMRV S+    YV++ VDDYSR+  V F+  K +A+ A
Sbjct:  165 WIIDLGCSKHMTGNRALLTIFVEKFLGTVC-FGNNDFAVISGYEDVVI---------GSMTIKKVYYVEGLVHNLFSVGQFCD---KGLKVAFRKSSCFVRNEDGVDLLTGDRSSNLYTIALNEVASNSSTCLLAKGSSSQSWLSHQRLSHLNFATINNLVKNNLIQGLPKMKFEKDHLCSACKQWKIHRKHHKSKTDFALNKPLYLLYMDLCGPMRVESINKKRYVLVVVDDYSRYTWVFFLHSKVEASEA 403          
BLAST of mRNA_H-paniculata_contig15807.3374.1 vs. uniprot
Match: A0A6H5K2R1_9PHAE (Integrase catalytic domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K2R1_9PHAE)

HSP 1 Score: 70.5 bits (171), Expect = 3.710e-10
Identity = 40/106 (37.74%), Postives = 62/106 (58.49%), Query Frame = 0
Query:  143 DVTDMHRLLVHASEQITRDTVETAGLVLTGEWRACKGCSPAKAHRFAVPKKTDKRATRAAERLYVDLGGPMRVTSLGGSSYVMLTVDDYSRFQAVKFIKKKSDATA 248
            DV  +H    HA+E + R+  +  GL LTG  + C GC  AK  +  VP ++  RA R  +  ++DL GPM   SLGGS ++++ VD +SR+  +  +++KSD  A
Sbjct:   37 DVNLLHVSSSHANEFLLRELAKQHGLRLTGVLQPCGGCLQAKGKKAGVPHQSGTRAERPHDLWHIDLCGPM-TASLGGSFFMIMFVDSFSRWMKLYGMRRKSDTLA 141          
BLAST of mRNA_H-paniculata_contig15807.3374.1 vs. uniprot
Match: A0A438H787_VITVI (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Vitis vinifera TaxID=29760 RepID=A0A438H787_VITVI)

HSP 1 Score: 70.5 bits (171), Expect = 3.790e-10
Identity = 72/245 (29.39%), Postives = 109/245 (44.49%), Query Frame = 0
Query:    3 WNSDTGATDHMTSHETAFEDYTPALPGTMCEIANETFVPVEGWRRLVLLVSQPRGKSRVAVLNRVPHVPELGRNLISTRGATDISGKSFICSANKASLGLGEEESLISNGSASSGPYEVEAVRSAAGTAKALTARKSSNRDVTDMHRLLVHASEQITRDTVETAGL--VLTGEWRACKGCSPAKAHRFAVPKKTDKRATRAAERLYVDLGGPMRVTSLGGSSYVMLTVDDYSRFQAVKFIKKKSD 245
            W  D+GA+ H TSH    ++Y     G +  +A+ + + V G   +   +S P G   V +L +V H+P+L RNLIS  G  D  G + +       +  G    +++ G  +   Y     R     A A T       D +  HR L H SE+  +  +    L  + + ++  C+ C   K  R +  K          E ++ DL GP  V SLGGS Y +  +DD SR   V F+K KSD
Sbjct:  286 WVLDSGASFHTTSHREIIQNYVAGDFGKVY-LADGSALDVVGLGDV--RISLPNGS--VWLLEKVQHIPDLRRNLISV-GQLDDEGHAILFVGGTWKVTKGAR--VLARGKKTDTLYMTSCPRDTIAVADAST-------DTSLWHRRLGHMSEKGMKMLLSKGKLPELKSIDFDMCESCILGKQKRVSFLKTGRTPKAEKLELVHTDLWGPSPVASLGGSRYYITFIDDSSRKVWVYFLKNKSD 515          
BLAST of mRNA_H-paniculata_contig15807.3374.1 vs. uniprot
Match: A0A6H5K6Z8_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K6Z8_9PHAE)

HSP 1 Score: 70.1 bits (170), Expect = 4.720e-10
Identity = 40/106 (37.74%), Postives = 61/106 (57.55%), Query Frame = 0
Query:  143 DVTDMHRLLVHASEQITRDTVETAGLVLTGEWRACKGCSPAKAHRFAVPKKTDKRATRAAERLYVDLGGPMRVTSLGGSSYVMLTVDDYSRFQAVKFIKKKSDATA 248
            DV  +H    HA+E + R+  +  GL LTG  R C GC  AK  +  VP ++  RA R  +  ++DL G M   SLGGS ++++ VD +SR+  +  +++KSD  A
Sbjct:   37 DVNLLHVSSSHANEFLLRELAKQHGLRLTGVLRPCGGCLQAKGKKAGVPHQSGTRAERPHDLWHIDLCGSM-TASLGGSFFIIMFVDSFSRWMKLHGMRRKSDTLA 141          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig15807.3374.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A060SQ02_PYCCI2.240e-1230.23Integrase catalytic domain-containing protein n=4 ... [more]
A0A060SIJ8_PYCCI2.340e-1230.23Integrase catalytic domain-containing protein n=2 ... [more]
A0A6H5KU45_9PHAE1.100e-1136.61Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5J7L5_9PHAE1.910e-1037.74Integrase catalytic domain-containing protein n=2 ... [more]
A0A6H5JA10_9PHAE2.630e-1035.85Integrase catalytic domain-containing protein (Fra... [more]
A0A146H2N5_MYCCL2.850e-1030.04Integrase catalytic domain-containing protein n=1 ... [more]
A0A699J248_TANCI3.140e-1026.19Retrovirus-related Pol polyprotein from transposon... [more]
A0A6H5K2R1_9PHAE3.710e-1037.74Integrase catalytic domain-containing protein n=3 ... [more]
A0A438H787_VITVI3.790e-1029.39Retrovirus-related Pol polyprotein from transposon... [more]
A0A6H5K6Z8_9PHAE4.720e-1037.74Integrase catalytic domain-containing protein n=1 ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig15807contigH-paniculata_contig15807:121..876 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig15807.3374.1mRNA_H-paniculata_contig15807.3374.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig15807 121..876 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig15807.3374.1 ID=prot_H-paniculata_contig15807.3374.1|Name=mRNA_H-paniculata_contig15807.3374.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=252bp
EHWNSDTGATDHMTSHETAFEDYTPALPGTMCEIANETFVPVEGWRRLVL
LVSQPRGKSRVAVLNRVPHVPELGRNLISTRGATDISGKSFICSANKASL
GLGEEESLISNGSASSGPYEVEAVRSAAGTAKALTARKSSNRDVTDMHRL
LVHASEQITRDTVETAGLVLTGEWRACKGCSPAKAHRFAVPKKTDKRATR
AAERLYVDLGGPMRVTSLGGSSYVMLTVDDYSRFQAVKFIKKKSDATAAL
QS
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